1. The neutral theory • The neutral theory and its predictions for levels of polymorphism and rates of divergence. • The nearly neutral theory 1 2. There is much genetic…

Slide 1 1 Dan Graur Methods of Tree Reconstruction Slide 2 2 Slide 3 3 Slide 4 4 Slide 5 5 Slide 6 6 Molecular phylogenetic approaches: 1. distance-matrix (based on distance…

Slide 1 Dispersal models Continuous populations Isolation-by-distance Discrete populations Stepping-stone Island model Slide 2 F ST, the fixation index, is the most important…

Bioinformatics and Evolutionary Genomics Gene Trees, Gene Duplications (I), and Orthology Gene Trees, Gene Duplications and Orthology Phylogenetic gene trees: how to make…

Molecular Data Molecular vs. morphological methods Morphological characters are not bad characters and they have certain advantages Easy to obtain and measure, extinct taxa,…

Likelihood methods Trees - “What is the probability that a proposed model of sequence evolution and a particular tree would give rise to the observed data?” “What tree…

Ejercicios de alineamiento de secuencias: CLUSTALW insertar secuencias de FASTA Pedir alineamiento múltiple Analizar resultado Regiones conservadas y variables en proteinas…