Slide 1Refinement of a pdb-structure and Convert A. Search for a pdb with the closest sequence to your protein of interest. B. Choose the most suitable entry (or several…

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Slide 1 Data Management in the http://www.pdb.org/ [email protected] Slide 2 History of the PDB 1970s  Community discussions about how to establish a PDB  Cold Spring Harbor…

Slide 1 High Throughput Processing of the Structural Information of the Protein Data Bank Zoltán Szabadka, Vince Grolmusz Department of Computer Science Eötvös University,…

Biochemistry 6. Proteins AP Biology Proteins Multipurpose molecules clockwise: Rubisco â most important protein on the planet? Hemoglobin â a red blooded protein :-) Collagen…

Established in 1996 at the European Bioinformatics Institute â autonomous structural database capability in Europe. One of the four sites around the world where structural…

PROTEIN DATABASES The ideal sequence database for computational analyses and data-mining: It must be complete with minimal redundancy It must contain as much up-to-date information…

Structure Motivation Introduction to MySQL Example Queries Using SQL to query SCOP Motivation In the last term, we accessed most information online via the web we interacted…

Plant biotechnology Lab 1 Strategies of gene analysis Promotor analysis Function of gene/protein Expression pattern of genes 1. GUS staining 2. RT-PCR GTL1 gene Research…

3D mRNA Function Single stranded Internal base paring and loop formation Termination of protein synthesis Balances of multi protein units pre-mRNA The first (primary) transcript…