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Documents BLAST etc.. What program to use for searching? 1) BLAST is fastest and easily accessed on the Web...

Slide 1BLAST etc. Slide 2 What program to use for searching? 1) BLAST is fastest and easily accessed on the Web –limited sets of databases –nice translation tools (BLASTX,…

Documents Nuclear Power Plants Disasters and their possible meltdowns.

Slide 1 Nuclear Power Plants Disasters and their possible meltdowns Slide 2 A little about nuclear power plants  Most reactors have a “core” where the reaction takes…

Documents Expect value Expect value (E-value) Expected number of hits, of equivalent or better score, found by...

Slide 1 Slide 2 Slide 3 Slide 4 Slide 5 Slide 6 Slide 7 Slide 8 Expect value Expect value (E-value) Expected number of hits, of equivalent or better score, found by random…

Documents Heuristic methods for sequence alignment in practice Sushmita Roy BMI/CS 576 Sushmita Roy...

Slide 1 Heuristic methods for sequence alignment in practice Sushmita Roy BMI/CS 576 www.biostat.wisc.edu/bmi576/ Sushmita Roy [email protected] Sep 27 th, 2012 BMI/CS…

Documents Tools and Softwares Group 13 Shashi Ranjan Murali Sivaramakrishnan Ognjen Perisic.

Slide 1 Tools and Softwares Group 13 Shashi Ranjan Murali Sivaramakrishnan Ognjen Perisic Slide 2 Introduction Importance of aligning two sequences –Identify the structure…

Documents Previous Lecture: Sequence Alignment Concepts. Introduction to Biostatistics and Bioinformatics...

Slide 1 Previous Lecture: Sequence Alignment Concepts Slide 2 Introduction to Biostatistics and Bioinformatics Sequence Database Searching This Lecture Stuart M. Brown, Ph.D.…

Documents Expect value (E-value)

Expect value (E-value) Expected number of hits, of equivalent or better score, found by random chance in a database of the size searched. Blast to Psi-Blast Blast makes use…

Documents Previous Lecture: Sequence Alignment Concepts

Database Searching with BLAST Previous Lecture: Sequence Alignment Concepts 1 Introduction to Biostatistics and Bioinformatics Sequence Database Searching This Lecture Stuart…