Slide 1BLAST etc. Slide 2 What program to use for searching? 1) BLAST is fastest and easily accessed on the Web –limited sets of databases –nice translation tools (BLASTX,…
Slide 1 Nuclear Power Plants Disasters and their possible meltdowns Slide 2 A little about nuclear power plants Most reactors have a “core” where the reaction takes…
Slide 1 Slide 2 Slide 3 Slide 4 Slide 5 Slide 6 Slide 7 Slide 8 Expect value Expect value (E-value) Expected number of hits, of equivalent or better score, found by random…
Slide 1 Heuristic methods for sequence alignment in practice Sushmita Roy BMI/CS 576 www.biostat.wisc.edu/bmi576/ Sushmita Roy [email protected] Sep 27 th, 2012 BMI/CS…
Slide 1 Tools and Softwares Group 13 Shashi Ranjan Murali Sivaramakrishnan Ognjen Perisic Slide 2 Introduction Importance of aligning two sequences –Identify the structure…
Slide 1 Previous Lecture: Sequence Alignment Concepts Slide 2 Introduction to Biostatistics and Bioinformatics Sequence Database Searching This Lecture Stuart M. Brown, Ph.D.…
Expect value (E-value) Expected number of hits, of equivalent or better score, found by random chance in a database of the size searched. Blast to Psi-Blast Blast makes use…