HMM for multiple sequences Pair HMM HMM for pairwise sequence alignment, which incorporates affine gap scores. “Hidden” States Match (M) Insertion in x (X) insertion…
Progressive multiple sequence alignments from triplets by Matthias Kruspe and Peter F Stadler Presented by Syed Nabeel Outline Background Motivation Algorithm Complexity…
HMM for multiple sequences Pair HMM HMM for pairwise sequence alignment, which incorporates affine gap scores. “Hidden” States Match (M) Insertion in x (X) insertion…