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RNA Sequencing Peter Tsai Bioinformatics Institute, University of Auckland.
Documents RNA Sequencing Peter Tsai Bioinformatics Institute, University of Auckland.

Slide 1 RNA Sequencing Peter Tsai Bioinformatics Institute, University of Auckland Slide 2  Study of transcriptomes  Identify known genes, exons, splicing events, ncRNA,…

Systems Biology Data Dissemination Working Group 25FEB2015.
Documents Systems Biology Data Dissemination Working Group 25FEB2015.

Slide 1 Systems Biology Data Dissemination Working Group 25FEB2015 Slide 2 Goal of the SysBio DDWG Coordinate approaches for sharing and dissemination of systems biology…

Next-Generation Sequencing Workshop RNA-Seq Mapping Center for Bioinformatics Hanqing Zhao 2011-07-11.
Documents Next-Generation Sequencing Workshop RNA-Seq Mapping Center for Bioinformatics Hanqing Zhao...

Slide 1 Next-Generation Sequencing Workshop RNA-Seq Mapping Center for Bioinformatics Hanqing Zhao 2011-07-11 Slide 2 Missions for RNA-Seq Mapping Slide 3 Before Tophat Previous…

Visualizing RNA-Seq Differential Expression Results with CummeRbund 1.
Documents Visualizing RNA-Seq Differential Expression Results with CummeRbund 1.

Slide 1 Visualizing RNA-Seq Differential Expression Results with CummeRbund 1 Slide 2 RNA-Seq Pipeline ‘The Tuxedo Suite’ Trapnell et al. (2012) Nature Protocols 7 (3)…

Measuring transcriptomes with RNA-Seq BMI 877 Spring 2014 Colin Dewey cdewey@biostat.wisc.edu.
Documents Measuring transcriptomes with RNA-Seq BMI 877 Spring 2014 Colin Dewey [email protected].

Slide 1 Measuring transcriptomes with RNA-Seq BMI 877 Spring 2014 Colin Dewey [email protected] Slide 2 Overview Some motivation: axolotl RNA-Seq technology The RNA-Seq…

Supplementary Material Supplementary Tables Supplementary Table 1. Sequencing statistics for ChIP-seq samples. Supplementary Table 2. Pearson correlation.
Documents Supplementary Material Supplementary Tables Supplementary Table 1. Sequencing statistics for...

Slide 1 Supplementary Material Supplementary Tables Supplementary Table 1. Sequencing statistics for ChIP-seq samples. Supplementary Table 2. Pearson correlation coefficients…

Comparative Genomics II: Functional comparisons Caterino and Hayes, 2007.
Documents Comparative Genomics II: Functional comparisons Caterino and Hayes, 2007.

Slide 1 Comparative Genomics II: Functional comparisons Caterino and Hayes, 2007 Slide 2 Overview I. Comparing genome sequences Concepts and terminology Methods  Whole-genome…

High-Throughput Sequencing Advanced Microarray Analysis BIOS 691-803, 2008 Dr. Mark Reimers, VCU.
Documents High-Throughput Sequencing Advanced Microarray Analysis BIOS 691-803, 2008 Dr. Mark Reimers, VCU.

Slide 1 High-Throughput Sequencing Advanced Microarray Analysis BIOS 691-803, 2008 Dr. Mark Reimers, VCU Slide 2 Quantitative HTS - Outline Technology Preprocessing Quantitative…

An Introduction to RNA-Seq Transcriptome Profiling with iPlant.
Documents An Introduction to RNA-Seq Transcriptome Profiling with iPlant.

Slide 1 An Introduction to RNA-Seq Transcriptome Profiling with iPlant Slide 2 Slide 3 Before we start: Align sequence reads to the reference genome The most time-consuming…

Andy Conley 3/26/2012 1. James Kent. Know that name. He is one of greatest, perhaps the greatest, bioinformatics programmers ever. He was deeply involved.
Documents Andy Conley 3/26/2012 1. James Kent. Know that name. He is one of greatest, perhaps the greatest,...

GMOD Genome Browses and Data Display Andy Conley 3/26/2012 1 James Kent. Know that name. He is one of greatest, perhaps the greatest, bioinformatics programmers ever. He…

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