1.Prediction of Protein Function from Sequence Derived Protein Features Lars Juhl Jensen2. Function unknown for 40% of human proteins 3. Pairwise alignment > carp Cyprinus…
1.BITS Training Protein Structure Joost Van Durme VIB Switch Laboratory Vrije Universiteit Brussel http://www.bits.vib.be/training2. Topics for today Exploring the protein…
Slide 1AMPLE – Using ab initio protein structure modelling techniques to create and enhance search models for use in Molecular Replacement Jaclyn Bibby, Jens Thomas, Olga…
Slide 1 Secondary Structure Prediction Victor A. Simossis Bioinformatics Center IBIVU Slide 2 Protein primary structure 20 amino acid types A generic residue Peptide bond…
Protein 3D-structure analysis Exercises Practicals Find update frequency for RCSB PDB: weekly. When was the last update? How many protein structures are there in wwPDB? http://www.rcsb.org/pdb/home/home.do…
Protein Planes Bob Fraser Protein Folding 882 Project November, 2006 Overview Motivation Points to examine Preliminary results Further work Cα trace problem Given: only…
Functional Annotation of Proteins via the CAFA Challenge Lee Tien Duncan Renfrow-Symon Shilpa Nadimpalli Mengfei Cao COMP150PBT | Fall 2010 What’s the problem? Huge bottleneck…
Secondary Structure Prediction Victor A. Simossis Bioinformatics Center IBIVU Protein primary structure 20 amino acid types A generic residue Peptide bond 1 MKYNNHDKIR DFIIIEAYMF…