1. The Building Blocks of XML Documents Seen from a DTD point of view, all XML documents (and HTML documents) are made up by the following building blocks: Elements Attributes…

Slide 11 Average Case Analysis of an Exact String Matching Algorithm Advisor: Professor R. C. T. Lee Speaker: S. C. Chen Slide 2 2 Problem Definition We are given text T=t…

Slide 11 Approximate Boyer-Moore String Matching Source : SIAM Journal on Computing, Vol. 22, No. 2, 1993, pp.243-260 J. Tarhio and E. Ukkonen Advisor: Prof. R. C. T. Lee…

Slide 11 Application of Algorithm Research to Molecular Biology R. C. T. Lee Dept. Of Computer Science National Chinan University Slide 2 2 There is one peculiar characteristics…

Slide 1Tuned Boyer Moore Algorithm Fast string searching, HUME A. and SUNDAY D.M., Software - Practice & Experience 21(11), 1991, pp. 1221-1248. Adviser: R. C. T. Lee…

1. String algorithmsast • Knuth-Morris-Pratt algorithmime: - find pattern P in string T - preprocess P (construct Fail array) - search time: O(n+m)n=|T|, m=|P|oday: •…

1. 3 -1Chapter 3String Matching 2. String Matching Problem Given a text string T of length n and a patternstring P of length m, the exact string matchingproblem is to…

Suffix Trees and their applications Suffix Trees and their applications Amit Metodi and Tali Weinberger Seminar 2012/1 1 Outline Introduction to Suffix Trees Trie and Compressed…

Applications Exact string and substring matching Longest common substrings Finding and representing repeated substrings efficiently Applications that lead to alternative,…

Efficient Algorithms for Substring Near Neighbor Problem Alexandr Andoni Piotr Indyk MIT What’s SNN? SNN ≈ Text Indexing with mismatches Text Indexing: Construct a data…