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1. RNA: Secondary Structure Prediction and Analysis 2. Outline 1. RNA Folding 2. Dynamic Programming for RNA Secondary Structure Prediction 3. Covariance Model for RNA Structure…

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Slide 1 DNA Properties and Genetic Sequence Alignment CSE, Marmara University mimoza.marmara.edu.tr/~m.sakalli/cse546 Nov/8/09 Slide 2 Devising a scoring system   Importance:…

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Dynamic Programming (cont’d) CS 466 Saurabh Sinha Affine Gap Penalties In nature, a series of k indels often come as a single event rather than a series of k single nucleotide…