Slide 1 Alignment Class III We continue where we stopped last week: FASTA – BLAST Slide 2 FASTA  FastA uses the method of Pearson and Lipman (1985).  Based on the…

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Alignment Class III We continue where we stopped last week: FASTA â BLAST FASTA FastA uses the method of Pearson and Lipman (1985). Based on the idea of identifying short…

Large scale DNA editing of retrotransposons accelerates mammalian genome evolution Shai Carmi, George Church, Erez Levanon Bar-Ilan University Harvard Medical School IBM,…

Three approaches to large-scale phylogeny estimation: SATé, DACTAL, and SEPP Tandy Warnow Department of Computer Science The University of Texas at Austin AGAT TAGACTT…

Predicting the 3D Structure of RNA motifs Ali Mokdad â UCSF May 28, 2007 Predicting RNA structure Existing RNA folding algorithms (mfold, sfold, pfold, Dynalign) determine…