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1.Genome browsing, Genomic data mining and Genome data visualization with Ensembl, Biomart and IGV Alex Sánchez August 2005 2. 2 What is Ensembl • Ensembl is a joint scientific…
Slide 1 Comparative Genomics and Evolution Pollard, K.S., et al., Forces Shaping the Fastest Evolving Regions in the Human Genome. PLoS Genetics 2(10), 2006. McLean, C.,…
Slide 1 Dissecting virulence of E. coli O157:H7 using genome alignments Slide 2 E. coli Escherichia coli is a normal resident of the mammalian gut –Most strains are non-pathogenic…
Slide 1 Whole Genome Alignment MUMmer and Alignment October 2 nd, 2007 Adam M Phillippy [email protected] Slide 2 Goal of WGA For two genomes, A and B, find a mapping from…