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Documents Annotation and Visualization Doreen Ware. Project Challenges Rapidly growing sequence data Full...

Slide 1Annotation and Visualization Doreen Ware Slide 2 Project Challenges Rapidly growing sequence data Full annotation of all clones New high-performance computing cluster…

Science Genome Browsing, Genomic Data Mining and Genome Data Visualization with Ensembl, Biomart and IGV...

1.Genome browsing, Genomic data mining and Genome data visualization with Ensembl, Biomart and IGV Alex Sánchez August 2005 2. 2 What is Ensembl • Ensembl is a joint scientific…

Education Ensembl Plants: Visualising, mining and analysing crop genomics data

1. Ensembl Plants: Visualising, mining and analysing crop genomics data Dan Bolser Ensembl Plants project leader EMBL-EBI http://plants.ensembl.org #EnsemblGenomes 2. Visualising,…

Science Alignment Approaches II: Long Reads

1. FIND MEANING IN COMPLEXITY © Copyright 2014 by Pacific Biosciences of California, Inc. All rights reserved.For Research Use Only. Not for use in diagnostic procedures.…

Documents COMPARATIVE FUNGAL GENOMICS : KNOWN KNOWNS & KNOWN UNKNOWNS. Josh Herr, Plant Biology...

Slide 1COMPARATIVE FUNGAL GENOMICS : KNOWN KNOWNS & KNOWN UNKNOWNS. Josh Herr, Plant Biology Interdepartmental Program Slide 2 Problems, hurdles, help wanteds… …

Documents Comparative Genomics and Evolution Pollard, K.S., et al., Forces Shaping the Fastest Evolving...

Slide 1 Comparative Genomics and Evolution Pollard, K.S., et al., Forces Shaping the Fastest Evolving Regions in the Human Genome. PLoS Genetics 2(10), 2006. McLean, C.,…

Documents 2013 iPlant workshop Marcela Karey Monaco. 2013 What is Gramene? An integrated plant reference...

Slide 1 2013 iPlant workshop Marcela Karey Monaco Slide 2 2013 What is Gramene? An integrated plant reference genome resource Comparative genomics hub of data & tools…

Documents Dissecting virulence of E. coli O157:H7 using genome alignments.

Slide 1 Dissecting virulence of E. coli O157:H7 using genome alignments Slide 2 E. coli Escherichia coli is a normal resident of the mammalian gut –Most strains are non-pathogenic…

Documents Whole Genome Alignment MUMmer and Alignment October 2 nd, 2007 Adam M Phillippy [email protected].

Slide 1 Whole Genome Alignment MUMmer and Alignment October 2 nd, 2007 Adam M Phillippy [email protected] Slide 2 Goal of WGA  For two genomes, A and B, find a mapping from…

Documents TGCAAACTCAAACTCTTTTGTTGTTCTTACTGTATCATTGCCCAGAATAT...

Slide 1 TGCAAACTCAAACTCTTTTGTTGTTCTTACTGTATCATTGCCCAGAATAT TCTGCCTGTCTTTAGAGGCTAATACATTGATTAGTGAATTCCAATGGGCA GAATCGTGATGCATTAAAGAGATGCTAATATTTTCACTGCTCCTCAATTT CCCTGTTTCCAGGTTTGTTGTCCCAAAATAGTGACCATTTCATATGTATA…