BIOTOOLS AND DATABASES BY C.GAYATHRI (I M.Sc.BIOINFORMATICS)  Needleman Wunsch Algorithm  Smith Waterman Algorithm  Published in 1970 by SAUL NEEDLEMAN and CHRISTIAN…

The Needleman-Wunsch algorithm for sequence alignment 7th Melbourne Bioinformatics Course Vladimir Liki´, Ph.D. c e-mail: [email protected] Bio21 Molecular Science and…

Slide 1Why Align Sequences? DNA sequences (4 letters in alphabet) – GTAAACTGGTACT… Amino acid (protein) sequences (20 letters) – SSHLDKLMNEFF… Align them so we can…

Slide 1Faculty of Computer Science Dalhousie University, Canada Andrew Rau-Chaplin, www.cs.dal.ca/~arc Parallel Computational Biochemistry Slide 2 Faculty of Computer Science…

Slide 1Pairwise Sequence Alignment Sushmita Roy BMI/CS 576 www.biostat.wisc.edu/bmi576/ Sushmita Roy [email protected] Sep 10 th, 2013 BMI/CS 576 Slide 2 Key concepts…

1.ClustalX Mr. Arvind Singh BII faculty2. ClustalX Clustal X is a new windows interface for the ClustalW multiple sequence alignment program. It provides an integrated environment…

1.Prediction of Protein Function from Sequence Derived Protein Features Lars Juhl Jensen2. Function unknown for 40% of human proteins 3. Pairwise alignment > carp Cyprinus…

1. From ELMs to Function: Interaction Networks and Feature Spaces Lars Juhl Jensen EMBL Heidelberg 2. Function unknown for 40% of human proteins 3. 1AOZ (129 aa) vs. 1PLC…

Bioinformatics I Sequence Analysis and Phylogenetics Winter Semester 2013/2014 by Sepp Hochreiter Institute of Bioinformatics, Johannes Kepler University Linz Lecture Notes…

Slide 1 Hidden Markov Models, HMM’s Morten Nielsen, CBS, Department of Systems Biology, DTU Slide 2 Objectives Introduce Hidden Markov models and understand that they are…