Slide 1New methods for simultaneous estimation of trees and alignments Tandy Warnow The University of Texas at Austin Slide 2 Species phylogeny Orangutan GorillaChimpanzee…

1.Perl for PhyloInformaticsWhat did we learn?What did we do?2. Tree ConceptsWhat are phylogenetic trees?3. Phylogenetic TreesDescribe the historical relationships among lineages…

Slide 1STRUCTURE http://pritch.bsd.uchicago.edu Riccardo Negrini [email protected] Slide 2 A model-based clustering methods that use molecular markers to: Infer…

Slide 1more sequence or more individuals, to combine or not? Slide 2  14.4. Tue Introduction to models (Jarno)  16.4. Thu Distance-based methods (Jarno)  17.4. Fri…

Slide 1 Detecting horizontal gene transfers using discrepancies in species and gene classifications Alix Boc Université du Québec à Montréal Slide 2 Problem description…

Slide 1 Seeing the forest for the trees : using the Gene Ontology to restructure hierarchical clustering Dikla Dotan-Cohen, Simon Kasif and Avraham A. Melkman Vol. 25 14…

Slide 1 Phylogenetic reconstruction Slide 2 Types of data used in phylogenetic inference: Distance-based methods: Transform the sequence data into pairwise distances, and…

New techniques that âboostâ methods for large-scale multiple sequence alignment and phylogenetic estimation Tandy Warnow Department of Computer Science The University of…

Molecular Systematics & Evolution of Microorganisms Instituto Oswaldo Cruz, FIOCRUZ Rio de Janeiro, Brazil September 1999 Introduction to model based methods Niklas Wahlberg…

* Bioinformatics GUEST LECTURE : Phylogenetic Analysis 26 November 2013, Université de Liège Ronald Westra, Biomathematics Group, Maastricht University * 1. Introduction…