C.Titus Brown Assistant Professor MMG, CSE, BEACON Michigan State University May 2014 [email protected] Large-scale transcriptome sequencing of non-model organisms: coping mechanisms…

1. WHAT’S AHEAD FORBIOLOGY?THE DATA INTENSIVE FUTUREC. Titus [email protected] Professor, Michigan State University(In January, moving to UC Davis / VetMed.)Talk…

1.Digital normalization and some consequences. C. Titus Brown Assistant Professor CSE, MMG, BEACON Michigan State University Nov 2013 [email protected]. Acknowledgements Lab members…

1.Awesome Big Data Algorithms http://xkcd.com/1185/2. Awesome Big Data AlgorithmsC. Titus [email protected] Asst Professor, Michigan State University(Microbiology, Computer…

1.Data of Unusual Size in MetagenomicsC. Titus [email protected] Asst Professor, Michigan State University(Microbiology, Computer Science, and BEACON)2. Openness• Twit me!…

1.Better science through superior software Michael R. Crusoe Software Engineer & Bioinformatician The GED Lab @ Michigan State [email protected] @biocrusoe 2. Open, online…

Slide 1 Pipelines! CTB 6/15/13 Slide 2 A pipeline view of the world Slide 3 Each computational step is one or more commands Trimmomatic fastx Velvet Slide 4 The breakdown…

1.Billie J. Swalla [email protected] Transcriptome Sequencing Reveals Heterochronic Shift of Chordate Gene Networks in Molgulid Ascidians 2. Tunicates mbulacraria…

PowerPoint Presentation Pipelines! CTB 6/15/13 A pipeline view of the world Each computational step is one or more commands Trimmomatic fastx Velvet The breakdown into steps…