1.Assembly tools and VisualisationMatthias HaimelEBI is an Outstation of the European Molecular Biology Laboratory.2. Overview• Assemblers • ABySS • SOAPdenovo• Visualisation…
1.From Infection to GenbankHow a pathogenic bacterium gets its genome to NCBITorsten SeemannVLSCI - Life Sciences Computation Centre - Genomics Theme - Lab Meeting - Friday…
1.TAMC 2007 25 th May, 2007 A Distributed Algorithm of FaultRecovery For Stateful FailoverIndranil Saha HTS (Honeywell Technology Solutions) Research Bangalore, IndiaEmail:…
1. NGS de novo assembly: progresses and challengesYingruiLiBGI Shenzhen 2. Overall sketch of SOAPdenovo2 3. Overall sketch of SOAPdenovo3 4. Main issues in NGS de novo assemblyEfficient…
1. RNA-Seq (yag_ays)http://yag-ays.jp/pdf/20110602labseminar_pub.pdf 2. r e d n s oc eusagiusamimi 3. NGS(Next Generation Sequencing) RNA-Seq(Transcriptome Analysis)de novoTranscriptome…
Slide 1 Large Plant Genome Assemblies using Phusion2 Zemin Ning The Wellcome Trust Sanger Institute Slide 2 Phusion2 Assembly Pipeline NGS Data Assembly Contig Merge Filtering…
Slide 1 CS267 Assignment 3: Parallelize Graph Algorithms for de Novo Genome Assembly Spring 2015 Slide 2 Problem statement Input: A set of unique k-mers and their corresponding…