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Supplementary material
The Tribolium castaneum cell line TcA: a new tool kit for cell biology
Kristopher Silver1,*, Hongbo Jiang2,*, Junping Fu2, Thomas W. Phillips2, Richard W. Beeman2,3, and Yoonseong Park2.
1Department of Anatomy and Physiology, Kansas State University, Manhattan, KS 66506.
2Department of Entomology, Kansas State University, Manhattan, KS 66506.
3USDA, Agricultural Research Service, Center for Grain and Animal Health Research, 1515 College Ave, Manhattan, KS 66502.
*K. Silver and H. Jiang contributed equally to this work.
Table S1. Primers used in this study
Table S2: Expression of Cuticle- and Chitin synthesis-associated genes in the TcA cell line.
Table S3: Expression of immunity-related genes in the TcA cell line.
Figure S1.
The map for the plasmid used in this study. The sequence is deposited in NCBI with the GenBank Accession ############.
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Table S1. Primers used in this study
Experiments Targets Primer information
Forward Reverse
PCR and cloning
pIZT backbone
pIZT-F1
*CGAATTTAAAGCTTGGTACCG
pIZT-R1
*GGGGTACCCCGCATGCCCAGACATGATAAGATACATTG
pIZT-F3
GGAAGATCTTCCGGTGAGGAACTAAACCATGG
pIZT-R5
TTGGCGCGCCAAGGAAGATCTTCCGGTCTGAC
bla-Amp blaPro
TTGGCGCGCCAATGCGCGGAACCCCTATTTG
blaAmp-R
GGAAGATCTTCCGGTCTGACAGTTACCAATGC
dTomato dTomatoF
ATGGTGAGCAAGGGCGAG
dTomatoR
TTACTTGTACAGCTCGTCCATG
TcHS promoter
KpnI-HSP-F
GGGGTACCCCGCTTGCTTAGCTTTGTTGC
KpnI-HSP-R
GGGGTACCCCTCAAATTCACTGACAGCGC
Tc006550 Promoter
6550ProF
TTGGCGCGCCAACAGCCGTTTTATTGCTTTCC
6550ProR
TTGGCGCGCCAACCTTACGTTAGAATTGAGTTACG
Tc014362 promoter
14362ProF
TTGGCGCGCCAAGGGTGCTGAACAACTTAAGTC
14362ProF
TTGGCGCGCCAATTTTCACCTTTGAGACACACA
Tc000476 promoter
476ProF
TTGGCGCGCCAAGCCCTAAATGACAAACGC
476ProR
TTGGCGCGCCAATTTGAACAAGGTAGATGTGAAC
Tcα-tubulin promoter
α-tubF1
TTGGCGCGCCAATACCGACATGGCGGGGAG
α-tubR1
TTGGCGCGCCAAACCCCGATTGTTTAGCTTGT
CMV promoter
CMVpro-F-KpnI CMVpro-R-KpnI
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GGGGTACCCCGCGTTGACATTGATTATTGAC GGGGTACCCCGAGAGCTCTGCTTATATAGACC
dsRNA synthesis
TcVermillion dsTcVer-F
taatacgactcactatagggGAGCAAATCGCCAAGTCGG
dsTcVer-R
taatacgactcactatagggCCTGGGTTCGTCCCTGTAA
TcCP6 dsCP6-F
taatacgactcactatagggCGCCTTGCCATGGACTGGACC
dsCP6-R
taatacgactcactatagggCGCATCCCCGTTTTCCGGGT
Nanoluciferase dsNlucF
taatacgactcactataGGGAGGTGTGTCCAGTTTG
dsNlucR
taatacgactcactataggGTTGATCAGGCGCTCGTC
qPCR HSP68a 68-qF
ATACGAAGATAGACAGAAACAGC
68a-qR
ACTAAGTAGGAACAAAAACCGA
HSP68b 68-qF
ATACGAAGATAGACAGAAACAGC
68b-qR
CATATACAACAAAAGGATTTAAC
Tc010172 10172-qF
GTACCAACAAGGCGGTCAG
10172-qR
CAATAGTGACTGCATTTAACATAATAC
Star marks (*) are for phosphorylations at the 5’ end of the primers. Underlined nucleotides are the restriction sites introduced in the primers. Italic nucleotides are additional bases attached to end of the DNA molecule to ensure the effective cleavage close to the hangout of the PCR products. Nucleotides in lowercases are the T7 promoter used for the dsRNA synthesis.
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Table S2: Expression of Cuticle- and Chitin synthesis-associated genes in the TcA cell line.
Description TC# RPKM Raw Reads
cuticle protein cp6 (TcCPR71)TC01313
5 41.58 2553
ribosomal protein s2 (TcRtv)TC00736
4 38.16 4603
protein yellow (Tcyellow-1)TC00544
4 22.04 4518
imaginal disc growth factor 4TC01391
7 13.58 2536cuticular protein analogous to peritrophins 3-a1 (TcObst-A1)
TC011140 10.91 1123
yellow protein (Tcyellow-F)TC00556
5 8.636 1699
cuticular protein ld-cp1v1TC00044
2 7.537 642
tyrosine hydroxylaseTC00249
6 6.665 1588
imaginal disc growth factor 4TC01391
8 6.192 1178
laccase 1TC00082
1 6.103 1842
integrin beta subunit (agap000815-pa) TcPSBI-1TC01170
7 4.818 1756
dopamine n acetyltransferaseTC00820
4 4.806 534
chitin deacetylase 4TC00763
5 4.428 940
yellow-bTC00548
0 4.383 796
brain chitinase and chia (chitinase20)TC00987
2 3.904 758cuticular protein analogous to peritrophins 3-b (TCObst-B)
TC011139 3.461 419
yellow-cTC01629
9 3.273 576
cuticular protein analogous to peritrophins 1-cTC00031
6 3.003 557
cuticular protein rr-1 family (agap000344-pa)TC00111
8 2.783 290
cuticular protein rr-1 family (agap002726-pa)TC01530
4 2.619 205
chitin deacetylase 1TC01410
0 2.589 599
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cuticular protein analogous to peritrophins 3-e (TcObst-E)
TC011349 2.294 246
domon domain-containing protein (TcKNK1)TC01065
3 2.216 643
n-acetyltransferase 2TC00790
5 2.187 208
cuticular protein rr-1 family (agap006497-pa)TC01301
3 1.937 484
cuticular protein rr-3 family (agap006931-pa)TC01282
9 1.853 258
adult cuticleTC00350
7 1.683 123
adult cuticular proteinTC01398
7 1.655 136
pupal cuticle proteinTC01477
1 1.376 94multidrug-resistance like protein isoform m (TcSUR)
TC012253 1.306 1020
syntaxin 1a (TcSyn4a)TC01169
4 1.094 157
cuticular proteinTC00989
0 1.092 94
gasp precursor (TcObst1&2)TC00116
9 1.082 291cuticular protein analogous to peritrophins 3-d2 (TC-Obst-D)
TC001350 1.03 114
syntaxin 13 (TcSyn 4c?)TC00717
7 0.9181 104
inwardly rectifying potassium isoform b (TcKir1)TC00670
6 0.8042 161
protein yellow (Tcyellow-E or Tcyellow-D)TC00622
9 0.7772 165
syntaxin-like protein (TcSyn1 or 6?)TC00307
4 0.7709 46
larval cuticle protein a3a (tm-a3a) (tm-lcp a3a)TC00072
0 0.7457 59
10g08 (TcSyn5)TC00797
4 0.7292 169
syntaxin 18TC01147
5 0.6586 84chitinase domain-containing protein 1 (chitinase 21)
TC006344 0.6005 101
domon domain-containing protein (TcSkeletor)TC01067
5 0.597 349
syntaxin 16TC00987
0 0.5947 72
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brain chitinase and chia (chitinase 11N)TC01566
5 0.5017 59
cuticular protein 62bcTC00243
4 0.4942 25
cuticular protein analogous to peritrophins 1-dTC00926
3 0.481 47
cuticular protein rr-2 family (agap006868-pa)TC00730
6 0.4452 36
cuticular protein 62bc cg1919-paTC01381
6 0.4336 42
syntaxin 8TC00313
7 0.4292 18
syntaxin 17TC00364
8 0.4141 53
tanTC00344
8 0.4134 69
multidrug resistance-associated protein 7 (SUR2)TC00803
5 0.3788 246
cuticular protein analogous to peritrophins 1-bTC00058
7 0.3621 31
cuticular protein rr-1 family (agap005995-pa)TC01450
1 0.361 59
isoform d (TcCDA2)TC01410
1 0.3429 86
amp dependent ligase (Tcebony)TC01197
6 0.325 121
cuticular protein analogous to peritrophins 1-aTC00473
3 0.3093 44
udp-n-acteylglucosamine pyrophosphorylaseTC00559
3 0.3065 64cuticular protein analogous to peritrophins 3-a2 (TcObst-A2)
TC011141 0.2928 30
cuticular protein analogous to peritrophins 3-d1 (TcObst-X)
TC011142 0.2828 28
pupal cuticle protein 36aTC01313
8 0.2557 22
fused lobes (TcFDL)TC00977
9 0.2514 65
chitin deacetylase-like isoform d (CDA5)TC00684
6 0.2431 117
endocuticle structural glycoprotein bd-TC01312
6 0.2383 17
cuticle proteinTC00335
6 0.2103 56
adult cuticular proteinTC01398
8 0.2071 12
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pupal cuticle proteinTC01313
6 0.1821 10
cg1397-pa (TcRtv)TC00738
4 0.1775 35
aromatic amino acid decarboxylase TcDDC3)TC01340
2 0.1472 28
metalloproteinase inhibitor 3 (TcTIMP)TC00230
5 0.1452 13
cuticular protein rr-1 family (agap009876-pa)TC01313
9 0.1383 11
larval cuticle protein a3a (tm-a3a) (tm-lcp a3a)TC00072
3 0.1362 11
pupal cuticle proteinTC01313
1 0.1312 8
chitinase 3 (chitinase 16)TC00917
6 0.1201 20
brain chitinase and chia (chitinase 6N)TC00387
6 0.1191 122
yellowTC00080
2 0.1176 21
protein naked cuticle-like proteinTC00163
7 0.115 29
pupal cuticle proteinTC01381
2 0.1088 8
chitin synthase 2TC01216
3 0.1058 67
syntaxin 1a (TcSyn4b)TC01209
4 0.1016 13
cuticular protein rr-2 family (agap006867-pa)TC01381
5 0.09353 11
cuticular protein 97eaTC00111
9 0.08975 13
dopa decarboxylaseTC01348
0 0.08746 18
tpa: cuticle proteinTC01289
2 0.08695 10
cuticular protein rr-2 family (agap001664-pa)TC01005
4 0.08131 9
yellow-hTC00623
0 0.0789 16
major royal jelly protein 4 (Tcyellow-4)TC00250
8 0.0763 13
cuticular protein rr-2 family (agap006868-pa)TC01630
7 0.07326 7
chitin deacetylase 9TC00390
5 0.07265 12
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major royal jelly protein 4 (Tcyellow-5)TC00250
9 0.07171 12
pupal cuticle proteinTC00776
4 0.07116 4
cuticle protein cpg42TC00482
7 0.06704 10
chitin synthase 1TC01463
4 0.06004 42
cuticular protein analogous to peritrophins 1-hTC00989
4 0.05894 21
cuticular protein 100aTC00111
5 0.05782 5
cuticular protein rr-2 family (agap008960-pa)TC00071
9 0.05354 5
yellow-h cg1629-pa (Tcyellow-3)TC00389
8 0.04513 8
cuticle proteinTC00072
4 0.04303 4
cuticular protein rr-1 family (agap006007-pa)TC01313
2 0.03903 4
aromatic amino acid decarboxylase (TcTyrDC1)TC01256
7 0.03683 10
cuticular protein 92fTC01282
8 0.03544 4
laccase-like multicopper oxidase 1 (TcLac2)TC01049
0 0.03491 4
udp-n-acteylglucosamine pyrophosphorylaseTC00175
1 0.03359 7
tpa: cuticle proteinTC01289
3 0.03304 1
cuticular proteinTC00822
8 0.03257 2
cuticular protein rr-1 family (agap009874-pa)TC01313
4 0.0314 3
isoform b (TcKNK3)TC00230
4 0.03136 8
pupal cuticle protein c1b (tm-c1b) (tm-pcp c1b)TC00626
2 0.03063 2
cuticular protein rr-1 family (agap005456-pa)TC00840
1 0.02877 5
dopa decarboxylase (TcDDC2)TC01340
1 0.02764 6
glutamate decarboxylaseTC00932
4 0.0271 6
cuticular protein rr-1 family (agap005998-pa)TC01449
9 0.02224 1
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chitin-binding domain containing proteinTC00450
0 0.02192 2
beta-n-acetylglucosaminidase nag2TC01154
0 0.02065 5
cuticular protein 47ef cg13214-paTC00259
5 0.01994 2
pupal cuticle proteinTC01380
9 0.01994 1
cuticular protein rr-1 family (agap009876-pa)TC01313
0 0.01944 1
laccase-like multicopper oxidase 1 (TcLac2)TC01048
9 0.01933 6
beta nu integrin subunit (TcPSBI-3)TC00578
2 0.01891 6
cuticular protein 50cbTC00698
1 0.0188 5
chitin deacetylase 3TC00540
9 0.01828 4
tpa: cuticle proteinTC01590
8 0.01752 1
cuticle protein cp5TC01472
0 0.01739 1
cuticular protein rr-2 family (agap001664-pa)TC00876
8 0.0172 2
cuticular protein rr-1 family (agap009876-pa)TC01468
5 0.01701 1
endocuticle structural glycoprotein bd-TC01468
6 0.01652 1
cuticular protein 51aTC01572
0 0.01617 1
cg34355 cg34355-pa (TcKNK2)TC01230
1 0.01608 5
cdc42 gtpase-activating protein (TcPMP1&2)TC00609
8 0.01596 15
cuticular protein rr-2 family (agap001669-pa)TC00310
9 0.01584 1
cuticular protein rr-1 family (agap009876-pa)TC01312
8 0.01522 1
adult cuticular proteinTC01382
8 0.01492 1
chitinase 6 (chitinase 18)TC00963
0 0.01445 2
cysteine sulfinic acid (TcDc CG5618)TC01417
7 0.01439 3
brain chitinase and chiaTC00317
9 0.01385 1
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tpa: cuticle proteinTC00383
0 0.01384 2
protein yellow (Tcyellow-2)TC00353
9 0.01345 2
chitinase (chitinase 5)TC00177
0 0.01299 3
cuticular protein 47ef cg13214-paTC00383
5 0.01299 1
chitin deacetylase 1 (CDA8)TC01414
7 0.01227 2
cuticular protein 50cbTC00401
0 0.0118 1
chitinase 7TC01548
1 0.01174 5
integrin beta-ps (TcPSBI-2)TC01370
6 0.01171 4
cuticular proteinTC00036
9 0.01134 1
cuticular protein 47ef cg13214-paTC00407
5 0.01134 3
tpa: cuticle proteinTC00383
2 0.01056 1
chitin binding proteinTC01356
8 0.0101 2
cuticleTC00085
1 0.009926 1
cuticular protein 62bc cg1919-paTC00876
7 0.009926 1
cuticular protein analogous to peritrophins 1-gTC00887
7 0.0098 1
cuticular protein 47ef cg13214-paTC00454
6 0.00944 1
pupal cuticle protein c1b (tm-c1b) (tm-pcp c1b)TC00284
0 0.008964 1
cuticle proteinTC01005
6 0.008964 1
hypothetical protein TcasGA2_TC016350TC01635
0 0.008349 1
tpa: cuticle proteinTC00383
1 0.006934 1
inwardly rectifying k+ (Kir2)TC00119
9 0.006723 1
chitin deacetylase 1 (CDA7)TC01366
1 0.006497 1
peritrophic matrix protein 14 (TcPMP5)TC00327
3 0.0062 1
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chitin deacetylase 1 (CDA6)TC01366
2 0.005725 1
adult cuticleTC01133
8 0.005468 1
cuticular protein cpg12TC00698
5 0.005305 2
cuticular protein analogous to peritrophins 1-jTC01110
1 0.005272 3
ionotropic glutamate receptor-invertebrateTC01630
0 0.004931 1
chitinase 13 (chitinase 19)TC00917
5 0.004798 1
inwardly rectifying k+ (TcKir3)TC00670
7 0.004228 1
cuticular protein 144 (agap006369-pa)TC01631
1 0.003569 1
laccase-like multicopper oxidase 1 (TcLLP)TC01588
0 0 0
hexosaminidase isoform a (TcNAG1)TC00980
8 0 0
fused lobes (TcNAG3)TC00111
6 0 0
inwardly rectifying k+ (TcKir4)TC00670
8 0 0
aspartate 1-decarboxylase (TcADC2)TC01058
1 0 0
TcPMP6TC00850
6 0 0
peritrophic matrix protein 2-b (TcPMP7)TC00327
5 0 0
yellow-g-like proteinTC00622
6 0 0
protein yellow (Tcyellow-G2)TC00592
7 0 0
mucin-like protein (TcPMP3)TC00923
2 0 0
histidine decarboxylaseTC01006
2 0 0
cuticular proteinTC00037
0 0 0
cuticular proteinTC00117
7 0 0
cuticular proteinTC00117
8 0 0
cuticular protein rr-2 family (agap006261-pa)TC00290
8 0 0
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cuticular protein rr-2 family (agap006828-pa)TC00350
9 0 0
cuticular protein 47ef cg13214-paTC00406
7 0 0
cuticular protein 47ef cg13214-paTC00407
2 0 0
cuticular protein 47ef cg13214-paTC00407
3 0 0
cuticular protein 49aa cg30045-pbTC00454
7 0 0
cuticular protein rr-1 family (agap010887-pa)TC00454
8 0 0
cuticular protein 92fTC00664
6 0 0
cuticular protein rr-2 family (agap012466-pa) partialTC00698
9 0 0
cuticular proteinTC00724
0 0 0
cuticular proteinTC00724
1 0 0
cuticular proteinTC00822
7 0 0
cuticular proteinTC00823
0 0 0
cuticular protein rr-2 family (agap001664-pa)TC00876
9 0 0
cuticular protein 92aTC00877
0 0 0
cuticular proteinTC00987
3 0 0
cuticular protein rr-2 family (agap001664-pa)TC01005
7 0 0
cuticular protein analogous to peritrophins 1-iTC01276
6 0 0
cuticular protein 47ef cg13214-paTC01312
7 0 0
cuticular protein 49abTC01313
3 0 0
chitinase 3 (chitinase 9)TC00917
7 0 0
chitinase 13 (chitinase 12)TC00917
8 0 0
chitinase 13 (chitinase 6)TC00917
9 0 0
chitinase 4TC00918
0 0 0
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teratocyte released chitinase (chitinase 8)TC00962
4 0 0
chitinase 6 (chitinase 17)TC00962
5 0 0
chitinase 13 (chitinase 2)TC00962
6 0 0
chitinase 13 (chitinase 11)TC00962
7 0 0
chitinase 13 (chtinase 13 or 14?)TC00962
8 0 0
chitinase 3 (chitinase 15)TC00962
9 0 0
larval cuticle protein a3a (tm-a3a) (tm-lcp a3a)TC00072
1 0 0
cuticle proteinTC00072
2 0 0
larval cuticle protein a3a (tm-a3a) (tm-lcp a3a)TC00072
5 0 0
larval cuticle protein a3a (tm-a3a) (tm-lcp a3a)TC00085
2 0 0
tpa: cuticle proteinTC00112
1 0 0
pupal cuticle protein c1b (tm-c1b) (tm-pcp c1b)TC00284
1 0 0
cuticle proteinTC00336
3 0 0
pupal cuticle protein c1b (tm-c1b) (tm-pcp c1b)TC00359
9 0 0
tpa: cuticle proteinTC00383
4 0 0
endocuticle structural glycoprotein bd-2TC00554
8 0 0
cuticle proteinTC00772
4 0 0
tpa: cuticle proteinTC00829
5 0 0
cuticle protein 6TC00840
0 0 0
cuticle protein 34TC01114
8 0 0
pupal cuticleTC01114
9 0 0
pupal cuticleTC01133
7 0 0
pupal cuticle proteinTC01312
9 0 0
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cuticular protein 49abTC01313
3 0 0
pupal cuticleTC01330
6 0 0
pupal cuticleTC01330
7 0 0
tpa: cuticle proteinTC01380
8 0 0
cuticular protein rr-1 family (agap006283-pa)TC01381
0 0 0
cuticular protein 62bc cg1919-paTC01381
1 0 0
tpa: cuticle proteinTC01381
4 0 0
cuticular protein 62bc cg1919-paTC01381
7 0 0
cuticular protein 62bc cg1919-paTC01381
8 0 0
adult cuticleTC01381
9 0 0
adult cuticleTC01382
0 0 0
adult cuticleTC01382
1 0 0
adult cuticleTC01382
2 0 0
adult cuticleTC01382
3 0 0
adult cuticleTC01382
4 0 0
adult cuticleTC01382
5 0 0
adult cuticleTC01382
6 0 0
pupal cuticle proteinTC01382
7 0 0
adult cuticleTC01398
9 0 0
cuticular protein 62bc cg1919-paTC01399
0 0 0
adult cuticleTC01399
2 0 0
pupal cuticleTC01449
7 0 0
larval cuticle proteinTC01449
8 0 0
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pupal cuticleTC01450
0 0 0
endocuticle structural glycoprotein bd-TC01477
0 0 0
adult cuticleTC01590
1 0 0
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Table S3: Expression of immunity-related genes in the TcA cell line.
Gene name Gene family TC# RPKM Reads
PGRP-LD PGRPTC00254
6 0 0
PGRP-LA PGRPTC00278
9 3.933 585
PGRP-LC PGRPTC00279
0 2.398 394
PGRP-LE PGRPTC01050
8 0.491 69
PGRP-SA PGRPTC01061
1 2.053 174
PGRP-SB PGRPTC01362
0 0.1591 13
PGRP-LB PGRPTC01568
9 0.2557 23
βGRP1 βGRP/GNBPTC00229
5 0.0122 2
βGRP3 βGRP/GNBPTC00399
1 0.1679 35
βGRP2 βGRP/GNBPTC01152
9 0.1727 33
CTL1 C-type lectinTC00697
80.0425
7 6
CTL2 C-type lectinTC01418
40.0075
6 1
CTL3 C-type lectinTC01089
8 0.8264 144
CTL4 C-type lectinTC01094
7 0.7892 101
CTL5 C-type lectinTC01041
9 3.533 333
CTL6 C-type lectinTC00370
80.0324
2 3
CTL7 C-type lectinTC01405
3 0.1487 18
CTL8 C-type lectinTC01041
20.0074
6 1
CTL9 C-type lectinTC01432
8 0 0
CTL10 C-type lectinTC00313
50.0081
9 2
CTL11 C-type lectinTC00313
60.0170
6 15
CTL12 C-type lectinTC01363
2 3.676 1877
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CTL13 C-type lectinTC01391
1 0.6879 69
CTL14 C-type lectinTC00087
1 0.9157 1438
CTL15 C-type lectinTC03066
7 5.207 394TC03075
4 0.8577 392
CTL16 C-type lectinTC00298
4 0.1236 46
GALE1 galectinTC00761
9 1.482 232
GALE2 galectinTC01187
1 1.719 300
GALE3 galectinTC01480
2 0.5352 286
FREP5 fibrinogen-likeTC00319
40.0048
6 1
FREP1 fibrinogen-likeTC00327
6 0 0
FREP2 fibrinogen-likeTC00327
7 0 0
FREP3 fibrinogen-likeTC00327
8 0 0
FREP4 fibrinogen-likeTC00329
4 0 0
FREP6 fibrinogen-likeTC00400
40.0108
6 3
FREP7 fibrinogen-likeTC00486
4 0 0
TEP-B TEPTC01466
4 4.961 3166
TEP-C TEPTC00966
70.0063
6 4
TEP-A TEPTC00937
5 3.081 2354
TEP-D TEPTC00080
80.0040
4 3
H1 cSPHTC00024
6 0.3804 62
H2 cSPHTC00024
7 10.41 1810
H3 cSPHTC00024
8 2.063 363
H4 cSPHTC00024
9 0.1466 27
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H5 cSPHTC00025
0 0 0
H6 cSPHTC00025
2 1.253 639
P7 cSPTC00049
40.0120
8 2
P8 cSPTC00049
5 0.2597 42
P9 SPTC00049
6 0 0
P10 cSPTC00049
7 0 0
P11 SPTC00054
5 0 0
P12 SPTC00054
6 0 0
P13 SPTC00054
7 0 0
H14 SPHTC00054
80.0077
9 1
P15 SPTC00055
0 0 0
P16 SPTC00063
5 0.7388 92
H17 SPHTC00074
0 0.3815 48
H18 SPHTC00082
9 12.08 2063
P19 SPTC00087
00.0028
2 2
P20 SPTC03006
1 0 0
P21 SPTC03006
20.0253
2 3
P22 SPTC00102
3 0 0
P23 SPTC00115
7 0.0085 1
P24 SPTC03006
3 0 0
P25 SPTC03006
4 0 0
P26 SPTC03006
5 0 0
P27 SPTC00115
9 0 0
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H28 cSPHTC00130
0 0 0
H29 cSPHTC00130
10.0389
8 6
H31 SPHTC00194
6 0.2612 34
P32 SPTC00206
1 0.1641 21
H33 cSPHTC00211
2 0 0
H34 cSPHTC00215
00.0147
3 2
H35 cSPHTC00219
30.0069
2 1
P36 SPTC00265
9 0.1779 16
P37 SPTC00276
6 0 0
P38 SPTC00276
7 0 0
P39 SPTC00276
8 0 0
P40 SPTC00278
5 0 0
P41 SPTC00278
6 0 0
P42 SPTC00308
10.0075
3 1
P43 SPTC00408
4 0 0
P44 cSPTC00416
0 1.674 367
P45 SPTC00441
8 0 0
P46 SPTC00452
3 0.4485 126.8
H47 SPHTC03006
6 0.3304 55
H49 SPHTC03006
8 0.5531 77
P50 SPTC00453
50.0798
6 22
H51 cSPHTC00462
20.0381
8 12
P52 cSPTC00462
4 0 0
Page 20
P53 cSPTC00463
5 0.1205 26
P54 SPTC00465
40.0111
2 6
P55 cSPTC00477
0 3.733 602
P56 cSPTC00486
3 0.0065 1
H57 SPHTC00490
00.0126
7 2
P58 SPTC00493
7 0.7272 61
H59 cSPHTC00495
7 0 0
P60 cSPTC00513
00.0063
4 1
P61 cSPTC00523
00.0324
8 5
P62 SPTC00532
70.0485
4 14
H63 SPHTC00563
5 0 0
H64 SPHTC00590
8 0.1043 12
H65 SPHTC00592
5 0 0
P66 cSPTC00597
60.0307
6 5
P67 SPTC00602
60.0388
7 4
P68 SPTC00603
3 2.333 567
P69 SPTC00603
4 8.308 1717
H70 SPHTC00624
6 0.1742 18.98
H71 SPHTC00624
7 0.00910.998
9
P72 SPTC00626
80.0252
3 3
H73 SPHTC00626
9 0.0404 4
P74 SPTC00642
40.0160
1 2
P75 SPTC00643
80.0088
6 1
Page 21
P76 SPTC00701
70.0089
3 1
P77 SPTC00701
9 0 0
H78 cSPHTC00702
6 0 0
P79 SPTC00826
7 0 0
P80 SPTC00850
4 0 0
H81 SPHTC00850
5 0 0
H82 cSPHTC00855
4 0 0
P83 cSPTC00865
30.0067
2 2
P84 cSPTC00865
7 0 0
H85 cSPHTC03060
9 0 0
P86 cSPTC03060
9 0 0
P87 cSPTC00865
9 0 0
H88 SPHTC00893
0 0 0
H89 SPHTC00893
1 0 0
P90 cSPTC00908
9 0.2052 33
P91 cSPTC00909
0 1.509 257
P92 cSPTC00909
1 0 0
P93 cSPTC00909
2 0.0123 2
P94 cSPTC00909
3 0 0
P95 cSPTC00909
40.0064
1 1
P96 SPTC00960
2 0 0
P98 SPTC03007
30.0057
3 1
H99 cSPHTC01007
6 0.8524 136
Page 22
P100 SPTC01078
1 0 0
H101 SPHTC01090
4 0 0
H102 SPHTC03007
4 0 0
H103 SPHTC03007
5 0 0
H104 cSPHTC01090
6 0 0
H105 SPHTC01090
7 0 0
H106 SPHTC01090
8 0 0
H107 SPHTC01090
9 0 0
H108 SPHTC01091
0 0 0
H109 SPHTC01091
1 0 0
H110 SPHTC01092
7 0.0087 1
H111 SPHTC01092
9 0 0
H112 SPHTC01093
0 0 0
H113 SPHTC01093
2 0 0
H114 SPHTC01093
3 0 0
H115 SPHTC01093
4 0 0
H116 SPHTC01093
5 0 0
H117 SPHTC01093
6 0 0
H118 SPHTC01093
7 0 0
H119 SPHTC01093
8 0 0
H120 SPHTC01093
9 0 0
P121 SPTC01094
0 0 0
H122 SPHTC01094
10.0089
3 1
Page 23
P123 SPTC01095
9 0 0
P124 SPTC01101
4 0.009 1
H125 cSPHTC01106
7 0 0
P126 cSPTC01107
8 0.2281 45
P127 SPTC01182
4 0 0
P128 SPTC01182
5 0 0
H129 SPHTC01239
0 0.2303 72
H130 SPHTC01257
30.0434
7 5
H131 SPHTC01257
40.0178
6 2
H132 SPHTC01257
5 1.45 173
P133 SPTC01304
2 0.0054 1
P134 SPTC01308
4 0 0
P135 SPTC01327
60.0078
1 1
P136 cSPTC01327
7 8.29 1380
H137 cSPHTC01327
80.0137
3 2
P138 cSPTC01327
9 0 0
P139 SPTC01328
0 2.039 268
P140 cSPTC01332
6 0.2445 37
P141 SPTC01341
5 0.6746 84
P142 cSPTC01341
60.0197
1 3
H143 SPHTC01342
1 0 0
P144 SPTC01361
30.0054
8 1
P145 SPTC01370
9 0 0
Page 24
H146 SPHTC01389
4 3.797 3502
P147 SPTC01408
3 0 0
H148 SPHTC01437
5 0 0
P149 SPTC01439
1 0.0086 1
P150 SPTC01493
0 0 0
P151 SPTC01508
30.0576
1 7
H152 SPHTC01509
9 0 0
P153 SPTC01511
00.0087
5 3
P154 SPTC01513
00.0714
4 8
P155 SPTC01523
7 0 0
P156 SPTC01529
50.0198
6 7
P157 SPTC01529
70.0255
8 5
H158 SPHTC01534
4 0 0
H159 SPHTC01539
0 0 0
P160 SPTC01557
90.0433
1 5
P161 SPTC01558
00.0268
9 3
P162 SPTC01561
7 0 0
P163 SPTC01561
8 0 0
H164 cSPHTC01567
0 0.2239 67
P165 SPTC01577
9 0 0
P166 SPTC01578
00.0084
1 1
P167 SPTC01612
1 0.0094 1
P168 SPTC01637
2 0 0
Page 25
serpin1 serpinTC00076
0 25.08 3861
serpin2 serpinTC00208
50.0353
4 18
serpin3 serpinTC00224
7 1.448 256
serpin4 serpinTC03007
6 3.573 689
serpin5 serpinTC03007
7 2.443 430
serpin6 serpinTC00506
50.0650
3 16
serpin7 serpinTC00574
0 3.966 679
serpin8 serpinTC00574
10.0240
3 4
serpin10 serpinTC00574
20.0089
3 1
serpin11 serpinTC00574
3 0.0073 1
serpin12 serpinTC00574
4 0 0
serpin13 serpinTC03007
9 0 0
serpin14 serpinTC03008
0 0 0
serpin15 serpinTC00574
6 0 0
serpin16 serpinTC00574
7 0 0
serpin17 serpinTC00574
9 0 0
serpin18 serpinTC00575
0 0.1517 25.97
serpin19 serpinTC00575
1 0.3892 66.81
serpin20 serpinTC00575
2 0.8893 151.9
serpin21 serpinTC00575
3 0.4048 79.98
serpin22 serpinTC00575
4 0.134 23
serpin23 serpinTC00577
10.0239
7 4
serpin24 serpinTC00625
5 0.1183 20
Page 26
serpin25 serpinTC00660
7 0 0
serpin26 serpinTC00786
9 1.371 345
serpin27 serpinTC01171
8 1.513 327
serpin28 serpinTC01331
0 16.84 3669
serpin29 serpinTC01338
9 1.576 304
serpin30 serpinTC01423
7 4.132 720
serpin31 serpinTC01522
40.0120
8 2
spz1 spätzleTC00052
0 1.359 134
spz7 spätzleTC00105
30.0125
7 1
spz2 spätzleTC00105
4 0.3429 41.96
spz3 spätzleTC03060
8 1.001 135TC03063
9 0.7235 61
spz4 spätzleTC00672
6 0 0
spz5 spätzleTC01330
4 0 0
spz6 spätzleTC01636
80.0112
3 2
Toll9 Toll-like receptorTC00062
5 0.1258 74
Toll1 Toll-like receptorTC00017
6 0.0116 3
Toll3 Toll-like receptorTC00443
8 2.467 1117
Toll4 Toll-like receptorTC00443
90.0740
7 27.99
Toll2 Toll-like receptorTC00445
20.0076
8 3
Toll7 Toll-like receptorTC00447
4 2.329 1320
Toll6 Toll-like receptorTC00489
50.0272
5 15
Toll8 Toll-like receptorTC00489
8 0.6483 340
Page 27
Toll10 Toll-like receptorTC00490
1 0.1644 94
ML1 MD2-likeTC00820
2 1.707 107
ML2 MD2-likeTC00820
3 0 0
ML3 MD2-likeTC01406
80.0151
2 1
ML4 MD2-likeTC01406
90.0153
2 1
ML5 MD2-likeTC01635
1 1.135 79
ML6 MD2-likeTC00725
20.0292
8 2
ML7 MD2-likeTC01406
7 0 0
ML8 MD2-likeTC01635
2 0.1031 7
cactus cactusTC00200
3 2.173 342
pelle pelleTC01536
5 0.2709 52
Myd88 Myd88TC00318
5 1.009 175
Tube TubeTC01189
5 0.6931 193
pellino pellinoTC00967
2 1.966 397
Traf2 TrafTC00770
6 1.038 179
cactin cactinTC00878
2 0.7151 329
Dif1 RELTC00769
7 2.375 728
Dif2 RELTC00809
6 0.9852 164
FADD FADDTC01404
2 0.3658 31
IKKb IKKbTC00141
9 0.2231 67.99
IKKb IKKbTC00979
8 1.745 553
IKKg IKKgTC00054
1 1.276 278
IMD IMDTC01085
1 0.6013 52
Page 28
TAK1 TAKTC00557
2 0.5737 127
casps1 caspaseTC00384
1 0.3954 53
casps2 caspaseTC01258
1 0.338 57
casps3 caspaseTC01258
0 0.7709 132
casps4 dredd/casp8TC01402
6 0.756 186
casps5 caspaseTC00010
50.0072
7 1
casps6 caspaseTC01257
9 0.1836 32
casps7 caspaseTC00239
7 0.6385 39.75
casps8 caspaseTC00006
8 0 0
caspar blocking caspaseTC00998
5 0.6829 194
IAP2 IAPTC00118
9 1.934 414
IAP1 IAPTC00119
2 4.837 709
IAP3 IAPTC00984
8 1.629 3054
IAP4 IAPTC00270
9 0.5984 37
REL1 RELTC01119
1 2.687 992
REL2 RELTC01470
8 2.489 1129
Tab2 Tab2TC00595
2 0.4862 111
Hep HepTC00038
5 0.4439 124
basket1 basketTC00681
0 0.7394 125
basket2 basketTC01196
7 0.4588 74
basket3 basketTC01359
4 2.064 315
Jra JraTC00681
4 2.353 232
kay kayTC01187
0 6.365 1010
Page 29
DOME DOMETC00187
4 3.056 1455
HOP HOPTC00864
8 0.5002 109
STAT STATTC01321
8 3.5 1182
proPO1 prophenoloxidaseTC00032
50.0135
4 4
proPO2 prophenoloxidaseTC01490
70.0135
1 3.994
proPO3 prophenoloxidaseTC01584
80.0416
3 5.994
MI melanization inhibitorTC00634
20.0065
2 1
hexamerin1 hexamerinTC00537
4 0 0
hexamerin2 hexamerinTC00537
5 0 0
hexamerin3 hexamerinTC00537
6 0 0
hexamerin4 hexamerinTC00537
7 0 0
hexamerin5 hexamerinTC00651
5 0.1873 57
hexamerin6 hexamerinTC00676
9 0 0
catalase1 catalaseTC01138
5 0 0
catalase2 catalaseTC01109
00.0096
4 2
GTX1 glutathione oxidaseTC01036
2 1.156 100
GTX2 glutathione oxidaseTC01035
5 10.52 769
GTX3 glutathione oxidaseTC01035
4 0.3835 33
HPX1 heme peroxidaseTC00549
3 0.6148 390
HPX2 heme peroxidaseTC01523
4 0 0
HPX3 heme peroxidaseTC01122
20.0818
7 32
HPX4 heme peroxidaseTC00457
9 0.1915 64
HPX5 heme peroxidaseTC00455
1 2.905 932
Page 30
HPX6 heme peroxidaseTC00075
1 0 0
HPX7 heme peroxidaseTC00017
50.0377
5 11
HPX8 heme peroxidaseTC00466
10.0497
8 13
HPX9 heme peroxidaseTC00155
6 0.333 200
HPX10 heme peroxidaseTC00249
8 0.2029 133
HPX11 heme peroxidaseTC00459
20.0048
6 2
TPX6 peroxiredoxinTC01492
9 10.3 877
TPX2 peroxiredoxinTC00170
00.0469
6 4
TPX1 peroxiredoxinTC01232
8 0.7215 73
TPX3 peroxiredoxinTC00107
1 1.839 194
TPX5 peroxiredoxinTC01379
1 0.3259 31
TPX4 peroxiredoxinTC00494
80.0206
5 2
SOD3 superoxide dismutaseTC00701
1 11.67 777
SOD2 superoxide dismutaseTC01167
6 48.72 3518
SOD4 superoxide dismutaseTC01167
5 2.932 289
SOD1 superoxide dismutaseTC01177
0 0.5553 267
attacin1 antimicrobial peptideTC00773
7 0.1115 8
attacin2 antimicrobial peptideTC00773
8 0.1267 8
attacin3 antimicrobial peptideTC00773
90.0155
2 1cecropin1 antimicrobial peptide
cecropin2 antimicrobial peptideTC03048
2 0 0
cecropin3 antimicrobial peptideTC00050
00.0254
2 1
defensin1 antimicrobial peptideTC00625
00.0347
6 1.999defensin2 antimicrobial peptide TC01051 0.0578 2
Page 31
7 2
defensin3 antimicrobial peptideTC01246
9 3.634 132defensin4 antimicrobial peptidecoleoptericin1 antimicrobial peptide
TC005093 0 0
coleoptericin2 antimicrobial peptide
TC005096
0.01626
0.9986
lysozyme1 lysozymeTC01034
90.0083
8 1
lysozyme2 lysozymeTC01035
0 0 0
lysozyme3 lysozymeTC01035
1 0 0
lysozyme4 lysozymeTC01035
2 0 0
WAP antimicrobial peptideTC01132
40.0752
1 4
neuroglian neuroglian/hemolinTC00188
9 7.538 4133
SR-B6 scavenger receptorTC00094
80.0174
5 4
SR-B7 scavenger receptorTC00724
7 2.442 490
SR-A1 scavenger receptorTC00786
1 1.826 2364
SR-B10 scavenger receptorTC00819
10.0044
6 1
SR-B1 scavenger receptorTC00820
90.0538
9 12
SR-B3 scavenger receptorTC00821
00.0606
5 37
SR-B11 scavenger receptorTC01034
8 0 0
SR-B12 scavenger receptorTC01035
3 0 0
SR-B13 scavenger receptorTC01035
6 0.2123 113.9
SR-A2 scavenger receptorTC01165
30.0383
9 8
SR-B14 scavenger receptorTC01275
6 0 0
SR-B15 scavenger receptorTC01275
7 0 0
SR-B16 scavenger receptorTC01275
8 0 0
Page 32
SR-A3 scavenger receptorTC01389
4 3.797 3502
SR-B5 scavenger receptorTC01494
6 0.1704 42
SR-B8 scavenger receptorTC01495
1 0.1133 27
SR-B9 scavenger receptorTC01495
4 5.154 1150
SR-A4 scavenger receptorTC01511
00.0087
5 3
SR-B4 scavenger receptorTC01514
40.0464
2 11
SR-C scavenger receptorTC01564
00.0807
8 19
SR-B2 scavenger receptorTC01585
40.0041
7 1
NimA nimrodTC01142
70.0155
6 3
NimB nimrodTC01142
8 8.335 1283
NimCl1 nimrodTC00205
3 0 0
NimCl2 nimrodTC01525
8 0 0
draper draperTC00068
9 2.257 970
Page 33
Figure S1.
The map for the plasmid used in this study. The sequence is deposited in NCBI with the GenBank Accession ############.