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Effect of Drought and N Availabil oil Microbial Production, Respirat and Carbon-use Efficiency John M. Stark Dept of Biology, & the Ecology Center Utah State University
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The Effect of Drought and N Availability on Soil Microbial Production, Respiration, and Carbon-use Efficiency

Jan 08, 2017

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Page 1: The Effect of Drought and N Availability on Soil Microbial Production, Respiration, and Carbon-use Efficiency

The Effect of Drought and N Availability on Soil Microbial Production, Respiration,

and Carbon-use Efficiency

John M. StarkDept of Biology, & the Ecology Center

Utah State University

Page 2: The Effect of Drought and N Availability on Soil Microbial Production, Respiration, and Carbon-use Efficiency

© zuki70 / Fotolia

Page 3: The Effect of Drought and N Availability on Soil Microbial Production, Respiration, and Carbon-use Efficiency

CHO

Page 4: The Effect of Drought and N Availability on Soil Microbial Production, Respiration, and Carbon-use Efficiency

CO2

ATP + NADH

CHO

Page 5: The Effect of Drought and N Availability on Soil Microbial Production, Respiration, and Carbon-use Efficiency

CO2

ATP + NADH

BiomassCHO

Page 6: The Effect of Drought and N Availability on Soil Microbial Production, Respiration, and Carbon-use Efficiency

CO2

ATP + NADH

BiomassCHO CUE

Page 7: The Effect of Drought and N Availability on Soil Microbial Production, Respiration, and Carbon-use Efficiency

CO2

ATP + NADH

BiomassCHO CUE = 0

Page 8: The Effect of Drought and N Availability on Soil Microbial Production, Respiration, and Carbon-use Efficiency

CO2

ATP + NADH

BiomassCHO CUE = 0.8

Page 9: The Effect of Drought and N Availability on Soil Microbial Production, Respiration, and Carbon-use Efficiency

CO2

ATP + NADH

BiomassCHO CUE = 0.8

C sequestration

Page 10: The Effect of Drought and N Availability on Soil Microbial Production, Respiration, and Carbon-use Efficiency

How do environmental factors regulate CUE?

• Temperature ?

Page 11: The Effect of Drought and N Availability on Soil Microbial Production, Respiration, and Carbon-use Efficiency

How do environmental factors regulate CUE?

• Temperature Maintenance E requirements

Page 12: The Effect of Drought and N Availability on Soil Microbial Production, Respiration, and Carbon-use Efficiency

How do environmental factors regulate CUE?

• Temperature • Substrate supply ?

Page 13: The Effect of Drought and N Availability on Soil Microbial Production, Respiration, and Carbon-use Efficiency

How do environmental factors regulate CUE?

• Temperature • Substrate supply

type of substrate C:N stoichiometry

Page 14: The Effect of Drought and N Availability on Soil Microbial Production, Respiration, and Carbon-use Efficiency

How do environmental factors regulate CUE?

• Temperature • Substrate supply

type of substrate C:N stoichiometry Limiting resource

Page 15: The Effect of Drought and N Availability on Soil Microbial Production, Respiration, and Carbon-use Efficiency

How do environmental factors regulate CUE?

• Temperature • Substrate supply

type of substrate C:N stoichiometry

• Soil moisture ?

Page 16: The Effect of Drought and N Availability on Soil Microbial Production, Respiration, and Carbon-use Efficiency

How do environmental factors regulate CUE?

• Temperature • Substrate supply

type of substrate C:N stoichiometry

• Soil moisture soil water potential soil water content

Page 17: The Effect of Drought and N Availability on Soil Microbial Production, Respiration, and Carbon-use Efficiency

How do environmental factors regulate CUE?

• Temperature • Substrate supply

type of substrate C:N stoichiometry

• Soil moisture soil water potential soil water content

Microbial physiology

Page 18: The Effect of Drought and N Availability on Soil Microbial Production, Respiration, and Carbon-use Efficiency

How do environmental factors regulate CUE?

• Temperature • Substrate supply

type of substrate C:N stoichiometry

• Soil moisture soil water potential soil water content

Microbial physiology

Diffusion of substrates

Page 19: The Effect of Drought and N Availability on Soil Microbial Production, Respiration, and Carbon-use Efficiency

How do environmental factors regulate CUE?

• Temperature • Substrate supply

type of substrate C:N stoichiometry

• Soil moisture soil water potential soil water content

Microbial physiology

Diffusion of substratesSoil texture

Page 20: The Effect of Drought and N Availability on Soil Microbial Production, Respiration, and Carbon-use Efficiency

Objective

Determine how microbial CUE changes with: • Substrate supply (C & N)• Soil moisture (water potential & content)• Substrate x moisture

Page 21: The Effect of Drought and N Availability on Soil Microbial Production, Respiration, and Carbon-use Efficiency

Approach

• Range of soil water potentials & contentsin soils of different textures

• Tracer and isotopic dilution assays with13C and 15N-labeled substrates

• Gas-phase additions of substrates(13C-acetic acid vapor & 15NH3)

Measure microbial respiration, C & N assimilation, and CUE using:

Page 22: The Effect of Drought and N Availability on Soil Microbial Production, Respiration, and Carbon-use Efficiency

Approach

Two methods for calculating CUE:13C-acetate assimilation:

CUE =13C in microbial biomass

13C-biomass + 13CO2

15N immobilization (by 15NH4+-pool dilution):

CUE =Inorg N immob * C:Nmicrob

Inorg N immob * C:Nmicrob + CO2

Page 23: The Effect of Drought and N Availability on Soil Microbial Production, Respiration, and Carbon-use Efficiency

Approach

Preliminary Experiment:

Page 24: The Effect of Drought and N Availability on Soil Microbial Production, Respiration, and Carbon-use Efficiency

Approach

Preliminary Experiment: Can microbes assimilate C and N

supplied through the gas phase in acid, dry soils?

Page 25: The Effect of Drought and N Availability on Soil Microbial Production, Respiration, and Carbon-use Efficiency

Approach

Preliminary Experiment: Can microbes assimilate C and N

supplied through the gas phase in acid, dry soils?

• Sitka spruce forest soil, pH 3.8• Moist (-0.03 MPa) and dry (-3.6 MPa) soils• Gas-phase additions of substrates

(13C-acetic acid vapor & 15NH3)

• 0 to 48-h incubations

Page 26: The Effect of Drought and N Availability on Soil Microbial Production, Respiration, and Carbon-use Efficiency

Approach

Preliminary Experiment: Can microbes assimilate C and N

supplied through the gas phase in acid, dry soils?

Herron et al. 2009 SBB

Page 27: The Effect of Drought and N Availability on Soil Microbial Production, Respiration, and Carbon-use Efficiency

Approach

Preliminary Experiment: Can microbes assimilate C and N

supplied through the gas phase in acid, dry soils?

Glass beads w/ 13C-acetic acid

Aquarium pump (90 mL/min)

Herron et al. 2009 SBB

Page 28: The Effect of Drought and N Availability on Soil Microbial Production, Respiration, and Carbon-use Efficiency

Approach

Preliminary Experiment: Can microbes assimilate C and N

supplied through the gas phase in acid, dry soils?

Glass beads w/ 13C-acetic acid

Aquarium pump (90 mL/min)

Soil cores

Herron et al. 2009 SBB

Page 29: The Effect of Drought and N Availability on Soil Microbial Production, Respiration, and Carbon-use Efficiency

Approach

Preliminary Experiment: Can microbes assimilate C and N

supplied through the gas phase in acid, dry soils?

Glass beads w/ 13C-acetic acid

Aquarium pump (90 mL/min)

15NH3

Herron et al. 2009 SBB

Page 30: The Effect of Drought and N Availability on Soil Microbial Production, Respiration, and Carbon-use Efficiency

Can acetic acid vapor supply 13C substrate to soil microbes in acidic and/or dry soils?

Page 31: The Effect of Drought and N Availability on Soil Microbial Production, Respiration, and Carbon-use Efficiency

Can acetic acid vapor supply 13C substrate to soil microbes in acidic and/or dry soils?

Dry soil (-3.6 MPa)

Moist soil (-0.03 MPa)

Page 32: The Effect of Drought and N Availability on Soil Microbial Production, Respiration, and Carbon-use Efficiency

Can acetic acid vapor supply 13C substrate to soil microbes in acidic and/or dry soils?

Dry soil (-3.6 MPa)

Moist soil (-0.03 MPa)

• Yes. 13C-acetate was readily respired.• Respiration rates were higher

after injection of larger amounts of acetic acid vapor.

Page 33: The Effect of Drought and N Availability on Soil Microbial Production, Respiration, and Carbon-use Efficiency

Can acetic acid vapor supply 13C substrate to soil microbes in acidic and/or dry soils?

Dry soil (-3.6 MPa)

Moist soil (-0.03 MPa)

• Yes. 13C-acetate was readily respired.• Respiration rates were higher

after injection of larger amounts of acetic acid vapor.

• Acetic acid injections had no negativeimpact on respiration of native SOC.

Page 34: The Effect of Drought and N Availability on Soil Microbial Production, Respiration, and Carbon-use Efficiency

Can acetic acid vapor supply 13C substrate to soil microbes in acidic and/or dry soils?

Page 35: The Effect of Drought and N Availability on Soil Microbial Production, Respiration, and Carbon-use Efficiency

Can acetic acid vapor supply 13C substrate to soil microbes in acidic and/or dry soils?

• 13C assimilation rates were higher after injection of larger amounts of acetic acid vapor and in moister soil.

Page 36: The Effect of Drought and N Availability on Soil Microbial Production, Respiration, and Carbon-use Efficiency

Does acetic acid vapor affect N cycling rates?

Page 37: The Effect of Drought and N Availability on Soil Microbial Production, Respiration, and Carbon-use Efficiency

Does acetic acid vapor affect N cycling rates?

• Mineralization: No

Page 38: The Effect of Drought and N Availability on Soil Microbial Production, Respiration, and Carbon-use Efficiency

Does acetic acid vapor affect N cycling rates?

• Mineralization: No

• Microbial N immobilization: Yes• Addition of larger quantities of

acetic acid vapor stimulatedmicrobial immobilization of Nin both moist and dry soil.

Page 39: The Effect of Drought and N Availability on Soil Microbial Production, Respiration, and Carbon-use Efficiency

So, what about microbial CUE?

Page 40: The Effect of Drought and N Availability on Soil Microbial Production, Respiration, and Carbon-use Efficiency

So, what about microbial CUE?

15NH3

13C-acetic acid

Page 41: The Effect of Drought and N Availability on Soil Microbial Production, Respiration, and Carbon-use Efficiency

So, what about microbial CUE?

15NH3

13C-acetic acid

• 15N and 13C methods gave very similar results after 24 to 48 h

Page 42: The Effect of Drought and N Availability on Soil Microbial Production, Respiration, and Carbon-use Efficiency

So, what about microbial CUE?

15NH3

13C-acetic acid

• 15N and 13C methods gave very similar results after 24 to 48 h

• CUE in different C-addition and soil moisture treatments converged to the same values (0.4 to 0.5) after 24 to 48 h

Page 43: The Effect of Drought and N Availability on Soil Microbial Production, Respiration, and Carbon-use Efficiency

Conclusions

• Gas-phase additions of substrate can be used to provide isotopically labeled C & N to microbes, and to manipulate substrate supply

Page 44: The Effect of Drought and N Availability on Soil Microbial Production, Respiration, and Carbon-use Efficiency

Conclusions

• Gas-phase additions of substrate can be used to provide isotopically labeled C & N to microbes, and to manipulate substrate supply

• 15N and 13C methods gave similar CUE estimates after 24 – 48h

Page 45: The Effect of Drought and N Availability on Soil Microbial Production, Respiration, and Carbon-use Efficiency

Conclusions

• Gas-phase additions of substrate can be used to provide isotopically labeled C & N to microbes, and to manipulate substrate supply

• 15N and 13C methods gave similar CUE estimates after 24 – 48h

• Surprisingly, C-partitioning into biomass and respiration did not appear to be affected by C supply or soil moisture.

Page 46: The Effect of Drought and N Availability on Soil Microbial Production, Respiration, and Carbon-use Efficiency

Acknowledgments

Jeanette NortonJennifer MacAdam

Katrina SlabaughShay Peterson

Funding from:

Collaborators:

Technicians: