1 Searching for sequences at NCBI: -Gene-based Entrez, Nucleotide, Protein BLAST -Organism-based Taxonomy Browser PopSet (Population Sets) * * * * * * These are text- based searches! Not sequence similarity! Are these guaranteed to be orthologs? Use BLAST to bring in more sequences.
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1
Searching for sequences at NCBI:-Gene-based
Entrez, Nucleotide, ProteinBLAST
-Organism-basedTaxonomy BrowserPopSet (Population Sets)
*
*
*
*
**
These are text-based searches!
Not sequencesimilarity!
Are theseguaranteed tobe orthologs?
Use BLAST to bring in more sequences.
2
Organism-based Searching
-Taxonomy browser-PopSet
*
3
within speciespolymorphismis also found inPopSet
4
Use BLAST to bring in more sequences.
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