September 2017 Report, p.1 BARUCH INSTITUTE OF COASTAL ECOLOGY AND FOREST SCIENCE Highway 17 North PO Box 596 Georgetown, SC 29442-0596 P (843) 546-1013 F (843) 546-6296 Monthly Report: September 2017 To: William Bailey, Mary Richards, and Nathan Dayan US Army Corps of Engineers - Savannah District 100 W. Oglethorpe Ave. Savannah, GA 31401 12 October 2017 By: Jamie Duberstein USACE Savannah District: Please see the bulleted list below for the major actions and accomplishments associated with Cooperative Agreement Number W912HZ-14-2-0002 (Modification Number P00003) for the month of September 2017. Please let me know if you would like me to elaborate on the details of any items I’ve listed below, or if there are any status updates you’d like on unlisted topics. Thank you, Jamie
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September 2017 Report, p.1
BARUCH INSTITUTE OF COASTAL ECOLOGY AND FOREST SCIENCE Highway 17 North PO Box 596 Georgetown, SC 29442-0596 P (843) 546-1013 F (843) 546-6296
Monthly Report: September 2017
To: William Bailey, Mary Richards, and Nathan Dayan US Army Corps of Engineers - Savannah District 100 W. Oglethorpe Ave. Savannah, GA 31401 12 October 2017 By: Jamie Duberstein USACE Savannah District: Please see the bulleted list below for the major actions and accomplishments associated with Cooperative Agreement Number W912HZ-14-2-0002 (Modification Number P00003) for the month of September 2017. Please let me know if you would like me to elaborate on the details of any items I’ve listed below, or if there are any status updates you’d like on unlisted topics. Thank you, Jamie
September 2017 Report, p.2
Marsh Vegetation Analysis and write-up of the June marsh vegetation sample is
complete, and will be included in the annual report delivered later this month.
The October marsh vegetation synoptic sample will begin 20 October with processing (e.g., sorting, counting, drying, weighing) immediately afterward.
Water Data Data from all water sensors were downloaded on 25 and 26
September. An updated salinity table is provided (Table 1). o Note that the summaries do not include data from 26-30
September because they fall after the September download dates.
We can now view salinity conditions real-time for belowground sensors at the following areas:
Back 1 Back 3 Back 3.5 Middle 2 Middle 3 Middle 4 Middle 5
Due to activities related to the October synaptic marsh vegetation sample, data from sensors will not be downloaded in October. Salinity summaries for FY17 provided in the forthcoming annual report will only include data up to 25 September so that the annual report can be completed in a timely manner.
An unexplained event occurred throughout the estuary over the period of 26 September – 04 October, which was detected via the real-time data displayed on the HydroVu website (Figure 1). We only have data pertinent to those belowground sensors mentioned above. We intend to discuss data from this time period in the next monthly report.
See Table 2 for a complete list of salinity data losses for FY17. o The aboveground sensor at Middle 4 failed on 08
September and was replaced on 25 September. o Some data failed to transmit to the HyrdoVu website.
Data from the above listed belowground sensors were downloaded from HydroVu this month, rather than via direct sensor download. Some data are missing, noted in
September 2017 Report, p.3
Table 2; these are likely recoverable via direct sensor download. Protocol going forward will involve direct sensor download for all sensors, leaving the data on HydroVu for monitoring purposes (e.g., identifying the failing sensor at Middle 4 this month) so that recoverable losses presented in reports will be minimized. However, unusual events may warrant augmentation of datasets with data downloaded from HydroVu. The accuracy of the data on HydroVu is not questioned, but losses can occur in the dataset stored on HydroVu if data equipment fail to transmit to the cloud via deployed telemetry equipment.
After removing the Aquatrolls from monitoring wells during data download, a YSI Pro30 handheld salinity meter was used to measure salinity. This is done to identify problems and/or verify accuracy of deployed sensors. A comparison of temporally similar measurements is provided (Table 3).
o Our protocol calls for pumping the wells after handheld measurements are taken. This removes sediments that can accumulate and eventually cover the actual sensors leading to reduced accuracy. We then use special swabs to clean the sensor surfaces.
The field crew accidentally pumped the Middle 5 belowground well prior to measuring salinity with the handheld YSI, but values are still reasonably similar between the YSI and the Aquatroll.
The water monitoring station at Middle 3 was leaning strongly when visited on 25 September, likely the result of Hurricane Irma. The well was repositioned ~6 ft. (2 meters) north to a firmer location.
The water monitoring station at Back 4 was leaning strongly when visited on 25 September, also likely related to Irma. The well was adjusted in-place. Recall this is the site that has the wooden framed hog deterrent around it. The well can only lean so far before it leans against the wooden frame, so further damage is unlikely. This monitoring station will be reinforced with lumber in November.
September 2017 Report, p.4
Forest monitoring Monthly measurements of baldcypress tree growth were last
taken on 26 September at Swamp 1 and Swamp 2 monitoring areas. Recall that no measurements were taken at Swamp 3 in August.
Average basal area increase since last measurement: o Swamp 1: 0.1 cm2 (25 August – 26 September) o Swamp 2: 0.3 cm2 (25 August – 26 September) o Swamp 3: 0.1 cm2 (27 July – 25 September)
Figure 1. Belowground salinity measurements logged by sensors with realtime telemetry capabilities. Monitoring wells were accessed on 25 September, with noticeable change in readings. However, sensors were not handled between 25 September – 04 October 2017.
September 2017 Report, p.5
Area Month Avg. (std. err.) Min Max Avg. (std. err.) Min MaxBack 1 October 2016 0.03 (0.01) 0.00 0.24 0.22 (0.00) 0.12 0.30
a Incomplete data record. See Table 2 for details.
b No aboveground flooding for this reporting period.
Table 1. Fiscal Year 2017 average, minimum, and maximum salinity (psu: practical salinity units) measured via sensors at above- and below-ground locations at (12) marsh monitoring areas and (3) tidal forest areas. Summaries are based on hourly measurements starting 01 October 2016 through 25 September 2017 for all monitoring areas unless noted by superscript. Details of data losses are provided in Table 2. Measurements taken during dry well conditions were removed from calculations of summary statistics.
a Incomplete data record. See Table 2 for details.
Table 1 (cont'd). Fiscal Year 2017 average, minimum, and maximum salinity at above- and below-ground locations in marsh and tidal freshwater forest monitoring areas.
Table 1 (cont'd). Fiscal Year 2017 average, minimum, and maximum salinity at above- and below-ground locations in marsh and tidal freshwater forest monitoring areas.
a Incomplete data record. See Table 2 for details.
Table 1 (cont'd). Fiscal Year 2017 average, minimum, and maximum salinity at above- and below-ground locations in marsh and tidal freshwater forest monitoring areas.
a Incomplete data record. See Table 2 for details.
b No aboveground flooding for this reporting period.
Table 1 (cont'd). Fiscal Year 2017 average, minimum, and maximum salinity at above- and below-ground locations in marsh and tidal freshwater forest monitoring areas.
a Incomplete data record. See Table 2 for details.
Table 1 (cont'd). Fiscal Year 2017 average, minimum, and maximum salinity at above- and below-ground locations in marsh and tidal freshwater forest monitoring areas.
Table 1 (cont'd). Fiscal Year 2017 average, minimum, and maximum salinity at above- and below-ground locations in marsh and tidal freshwater forest monitoring areas.
Table 1 (cont'd). Fiscal Year 2017 average, minimum, and maximum salinity at above- and below-ground locations in marsh and tidal freshwater forest monitoring areas.
Middle 4 Aboveground 09/08/2017 03:00 09/25/2017 11:00 17.33 Internal hardware failurea Data are likely recoverable via direct sensor download. See text for details.
Data loss period
Table 2. Summary of FY17 salinity data losses from Aquatroll sensors deployed at SHEP monitoring areas between the dates of 01 October - 25 September 2017. Data loss periods and number of days may include periods within FY16. Minor data losses were incurred when data were downloaded near pre-programmed sensor measurements. Water level data losses may be beyond dates listed below.
Table 3. Comparison of belowground salinity measurements taken September 2017 via autonomous sensors (In-Situ Aquatrolls) versus a "spot check" measured via handheld YSI salinity meter (units: parts per thousand = ppt). Reports typically provide summaries of hourly Aquatroll measurements of salinity as practical salinity units (psu) though measurements of total dissolved solids as parts per thousand (ppt) are also collected. Here we report both Aquatroll measurements to facilitate comparisons with handheld YSI measurements. Accuracy of the handheld YSI meter is 0.1 (ppt), while accuracy of the Aquatrolls is 0.001 (psu, ppt); Aquatroll values were rounded to the nearest 0.1 to facilitate comparisons.