Top Banner
Metabolism of Bioactive Endogenous and Exogenous Compounds Oxidation Dehydrogenases Oxidases Cytochrome P450 enzymes Reduction Dehydrogenases Reductases Conjugation Sulfotransferases 3´-Phosphoadenosine 5´-phosphosulfate (PAPS) 3´,5´-adenosine bisphosphate sulfotransferase R OH R O S O O O O S O O O OH O CH 2 O N N N N NH 2 P O O O P O O O 3´-Phosphoadenosine 5´-phosphosulfate (PAPS)
27

Metabolism of Bioactive Endogenous and Exogenous Compoundsbrandt/Chem430/Xenobiotic_and... · Metabolism of Bioactive Endogenous and Exogenous Compounds Oxidation Dehydrogenases Oxidases

Jun 24, 2018

Download

Documents

nguyendang
Welcome message from author
This document is posted to help you gain knowledge. Please leave a comment to let me know what you think about it! Share it to your friends and learn new things together.
Transcript
Page 1: Metabolism of Bioactive Endogenous and Exogenous Compoundsbrandt/Chem430/Xenobiotic_and... · Metabolism of Bioactive Endogenous and Exogenous Compounds Oxidation Dehydrogenases Oxidases

Metabolism of Bioactive Endogenous and Exogenous Compounds Oxidation Dehydrogenases Oxidases Cytochrome P450 enzymes Reduction Dehydrogenases Reductases Conjugation Sulfotransferases

3´-Phosphoadenosine5´-phosphosulfate

(PAPS)

3´,5´-adenosinebisphosphate

sulfotransferaseR OH R O S

O

O

OO S

O

OO

OHO

CH2O

N

N N

N

NH2

P

O

O

O

PO O

O

3´-Phosphoadenosine5´-phosphosulfate

(PAPS)

Page 2: Metabolism of Bioactive Endogenous and Exogenous Compoundsbrandt/Chem430/Xenobiotic_and... · Metabolism of Bioactive Endogenous and Exogenous Compounds Oxidation Dehydrogenases Oxidases

Glucuronases

O

N

HN

O

O

P

O

OO

OHOH

CH2OP

O

O

O O H

OH

OH

O

CH2HO

P

O

O

O O

α-Glucose-1-phosphate

P

O

O

O

Uridine Triphosphate(UTP)

+H

UDP-GlucosePyrophosphorylase N

HN

O

O

O

OHOH

CH2OP

O

O

O H

OH

OH

O

CH2HO

P

O

O

O O

UDP-Glucose

+H

O P

O

O

OHP

O

O

O

UDP-Glucosedehydrogenase

2 NAD+

H2O

2 NADH

N

HN

O

O

O

OHOH

CH2OP

O

O

O H

OH

OH

O

CO

P

O

O

O O

UDP-Glucuronic acid

H

O

UDP-glucuronosyltransferase

R OH

UDPUDP-Glucuronic acid

O H

OH

OH

O

CO

OH

O

R

Page 3: Metabolism of Bioactive Endogenous and Exogenous Compoundsbrandt/Chem430/Xenobiotic_and... · Metabolism of Bioactive Endogenous and Exogenous Compounds Oxidation Dehydrogenases Oxidases

Steroid Biosynthetic Pathways

HO Cholesterol

1

2

34

56

7

8

9

10

11

12

13

14 15

O

HO Pregnenolone

1617

18

19

20

2122

23

24

25

26

27

O

O

O

O

O

O

O

O

OH

OH

OH

HO

HO

O

O

O

O

O

O

O

OH

OH

HO

O

HO

OH

OH

OH

OH

O

HO

O

O

HO

O

O

OH

O

OH

HO

OH

O

O

S

O

O

O

P450scc

P45011β

3β-Hydroxysteroid Dehydrogenase/∆5-∆4-isomerase

P45

0 17 α

P45

0 17 α

P45021

P45018

P45018

P45

0 aro

m

17β-Hydroxysteroid Dehydrogenase

5α-Reductase

17α-Hydroxy-Pregnenolone

17α-Hydroxy-ProgesteroneProgesterone

Deoxycorticosterone

Corticosterone

Aldosterone

Dehydroepiandrosterone(DHEA)

DHEA-Sulfate

Deoxycortisol

Cortisol

Androstenedione

Testosterone

Dihydrotestosterone(DHT)

Estradiol

Estrone

Sulfotransferase

*

*

*

*

* – Denotes mitochondrial enzyme

P450scc (cholesterol side-chain cleavage enzyme)*

P45017α (17α-hydroxylase/lyase)

P45021 (21-hydroxylase)

P45011β (11β-hydroxylase)*

P45018 (18-hydroxylase)*

P450arom (aromatase)

Page 4: Metabolism of Bioactive Endogenous and Exogenous Compoundsbrandt/Chem430/Xenobiotic_and... · Metabolism of Bioactive Endogenous and Exogenous Compounds Oxidation Dehydrogenases Oxidases

Steroid Nomenclature

Steroid derivatives

Cholestane (C27) Pregnane (C21) Androstane (C19) Estrane (C18)

HO Cholesterol (cholest-5-ene-3β-ol)

1

2

34

56

7

8

9

10

11

12

13

14 15

1617

18

19

20

2122

23

24

25

26

27

HO

OH

OH

O

OH

H

Cholic acidHO

OHO

OH

H

Deoxycholic acidHO

OHO

NH

H

Taurocholic acid

SO

OHO

Page 5: Metabolism of Bioactive Endogenous and Exogenous Compoundsbrandt/Chem430/Xenobiotic_and... · Metabolism of Bioactive Endogenous and Exogenous Compounds Oxidation Dehydrogenases Oxidases

Steroid Metabolism

NAD(P) NAD(P)H

11β-hydroxysteroiddehydrogenase

HO OH

O

OH

OCortisol

OH

O

OH

OCortisone

O

HO OH

O

OH

O

5α-reductase

3a-hydroxysteroiddehydrogenase

NADPH

NADP

H

5α-dihydrocortisol

HO OH

O

OH

HOH

Tetrahydrocortisol

5β-reductase

HO OH

O

OH

OH

3α-hydroxysteroiddehydrogenase

NADPH

NADP

HO OH

O

OH

HOH

3a-Tetrahydrocortisol

NADPH

NADP

20α-hydroxysteroiddehydrogenase

HO OH

OH

OH

HOH Cortol

O

O

OH

HO

O

Aldosterone

O

O

OH

O

HO

Aldosterone

Page 6: Metabolism of Bioactive Endogenous and Exogenous Compoundsbrandt/Chem430/Xenobiotic_and... · Metabolism of Bioactive Endogenous and Exogenous Compounds Oxidation Dehydrogenases Oxidases

Catecholamine Synthesis

Adrenal Medulla

OH

H3N

OO

Tyrosine

Tyrosinehydroxylase

[tetrahydrobiopterin]

NADPH NADP

OH

H3N

OO

OH

DOPA

CO2

DOPA decarboxylase

[PLP]

OH

H3N

OH

Dopamine

Dopamineβ-hydroxylase

Ascorbicacid

Dehydro-ascorbicacid

OH

H3N

OH

OH

Norepinephrine

S-adenosyl methionine

O

OHOH

CH2

N

N N

N

NH2

SO

O

NH3

CH3

S-adenosyl methionine

OH

H2N

OH

OH

Epinephrine

PhenylethanolamineN-methyltransferase

(PNMT)

CH3

S-adenosylhomocysteine

TyrosineTyrosine

hydroxylase[tetrahydrobiopterin]

NADPH NADP

DOPA

CO2

DOPA decarboxylase

[PLP]

Dopamine

Norepinephrine

S-adenosylmethionine

Epinephrine

PhenylethanolamineN-methyltransferase

(PNMT)

S-adenosylhomocysteine

Dopamine

Dopamineβ-hydroxylase

Ascorbicacid

Dehydro-ascorbicacid

Norepinephrine

Epinephrine

Cytoplasm

Secretory

Vesicle

Normetanephrine

Metanephrine

Page 7: Metabolism of Bioactive Endogenous and Exogenous Compoundsbrandt/Chem430/Xenobiotic_and... · Metabolism of Bioactive Endogenous and Exogenous Compounds Oxidation Dehydrogenases Oxidases

Catecholamine Breakdown

Catecholamine Breakdown

OH

H3N

OH

OH

Norepinephrine

Monamine Oxidase A[flavin]

O2 NH3

H2O2 OH

O

OH

OH

3,4-dihydroxy-phenylglycoaldehyde

H

Aldehydereductase

NADPH NADP

OH

OH

OH

3,4-dihydroxy-phenylglycol

HO

Nerve termini

OH

H3N

OH

Dopamine

Monamine Oxidase B[flavin]

OH

OH

H

O

O2 NH3

H2O2

3,4-dihydroxyphenylacetaldehyde

Aldehydereductase

NADPH NADP

OH

OH

3,4-dihydroxy-phenylethanol

HO

OH

H3N

OH

OH

Norepinephrine

S-adenosylmethionine

S-adenosylhomocysteine

Catechol-O-MethylTransferase

OH

H2N

OH

OH

Epinephrine

CH3

S-adenosylmethionine

S-adenosylhomocysteine

Catechol-O-MethylTransferase

OH

H3N

O

OH

Normetanephrine

CH3

OH

H2N

O

OH

Metanephrine

CH3

CH3

Peripheral tissues

MonamineOxidaseA

[flavin]

OH

O

O

OH

3-methoxy-4-hydroxy-phenylglycoaldehyde

H

CH3

Aldehydereductase

NADPH

NADP

OH

O

OH

3-methoxy-4-hydroxy-phenylglycol

CH3

HO

O2

O2

NH2

H2O2H3C

NH3

H2O2

Page 8: Metabolism of Bioactive Endogenous and Exogenous Compoundsbrandt/Chem430/Xenobiotic_and... · Metabolism of Bioactive Endogenous and Exogenous Compounds Oxidation Dehydrogenases Oxidases

OH

O

O

OH

3-methoxy-4-hydroxy-mandelic acid

(Vanillylmandelic acid)(VMA)

OH

CH3

OH

O

OH

3-methoxy-4-hydroxy-phenylglycol

CH3

HO

NAD NADH

Alcoholdehydrogenase

OH

O

O

OH

3-methoxy-4-hydroxy-phenylglycoaldehyde

H

CH3

OH

O

3-methoxy-4-hydroxy-phenylethanol

HO

NAD NADH

Alcoholdehydrogenase

CH3

OH

O

O

3-methoxy-4-hydroxy-phenylacetaldehyde

H

CH3

NADH

Aldehydedehydrogenase

NADH

Aldehydedehydrogenase

Liver

NAD+ H2O

NAD+ H2O

OH

O

O

3-methoxy-4-hydroxy-phenylacetic acid

(Homovanillic acid)

OH

CH3

Page 9: Metabolism of Bioactive Endogenous and Exogenous Compoundsbrandt/Chem430/Xenobiotic_and... · Metabolism of Bioactive Endogenous and Exogenous Compounds Oxidation Dehydrogenases Oxidases

Consequences

O

O

N

CH3

CH3

O

N

CH3

O CH3

Meperidine(Demerol)

1-Methyl-4-propionoxypiperidine

(MPPP)

H+

HeatN

CH3

N-Methyl-4-phenyl1,2,3,6 tetrahydropyridine

(MPTP)

MonoamineoxidaseB

N

CH3

MPDP+

N

CH3

1-Methyl-4-phenylpyridinium

(MPP )+

N

HH3C

CH3

Selegiline

HO

HONHH3C

OH

O

CarbidopaNH2

HO

HO

NO2

C

N

O

CH3

CH3

NEntacapone

Page 10: Metabolism of Bioactive Endogenous and Exogenous Compoundsbrandt/Chem430/Xenobiotic_and... · Metabolism of Bioactive Endogenous and Exogenous Compounds Oxidation Dehydrogenases Oxidases

Acetaminophen Metabolism

UDP-Glucuronic acid

O

OH

OH

OH

C O

O N

NH

O

O

P

O

OO

OHHO

CH2OP

O

O

O

O

O

OH

OH

OH

C O

O

O

NHCH3

O

NHCH3

O

HO

Acetaminophen

N

NH

O

O

P

O

OO

OHHO

CH2OP

O

O

OO

O P

O

O

O

O S

O

OO

OH

CH2O

N

N N

N

NH2

P

O

O

O

3´-phosphoadenosine5´-phosphosulfate (PAPS)

glucuronyltransferase

sulfotransferase

NHCH3

O

HO

Acetaminophen

O S

O

O

O NHCH3

O

O P

O

O

O

O

OH

CH2O

N

N N

N

NH2

P

O

O

O

UDP

adenosine3´,5´-bisphosphate

NHCH3

O

HO

Acetaminophencytochrome P450

(CYP2E1,CYP1A2,CYP2D6)

NH3C

O

OHHO

NH3C

O

O

Acetimidoquinone

SpontaneousH2O

HN

O

HN

O

O

OH3N

O O

HS

γ-Glu

Cys Gly

Glutathione(reduced form)HN

O

HN

O

O

OH3N

O O

S

HNH3C

O

OH

Cys-Protein

S

HNH3C

O

OHProtein-Cys-SH

Spontaneous

Spontaneous

Page 11: Metabolism of Bioactive Endogenous and Exogenous Compoundsbrandt/Chem430/Xenobiotic_and... · Metabolism of Bioactive Endogenous and Exogenous Compounds Oxidation Dehydrogenases Oxidases

Cytochrome P450 Enzymes in Humans (from http://drnelson.uthsc.edu/human.P450.table.html) Family Known

genes Comments

CYP1 CYP1A1 CYP1A2 CYP1B1

Xenobiotic and endogenous bioactive catabolism, carcinogen activation

CYP2 CYP2A6 CYP2A7 CYP2A13 CYP2B6 CYP2C8 CYP2C9 CYP2C18 CYP2C19 CYP2D6 CYP2D7 CYP2E1 CYP2F1 CYP2J2 CYP2R1 CYP2S1 CYP2U1 CYP2W1

Xenobiotic and endogenous bioactive catabolism

CYP3 CYP3A4 CYP3A5 CYP3A7 CYP3A43

Xenobiotic and endogenous bioactive catabolism

CYP4 CYP4A11 CYP4A22 CYP4B1 CYP4F2 CYP4F3 CYP4F8 CYP4F11 CYP4F12 CYP4F22 CYP4V2 CYP4X1 CYP4Z1

Fatty acid hydroxylation

CYP5 CYP5A1 Platelet thromboxane A synthase 1 CYP7 CYP7A1

CYP7B1 7A1 is liver enzyme: 7α-hydroxylase; catalyzes the main regulated step in bile acid synthesis 7B1 is non-liver, and may be involved in steroid metabolism

CYP8 CYP8A1 CYP8B1

8A1 is prostaglandin I2 (prostacyclin) synthase 8B1 intronless; 12α-hydroxylase in bile acid synthesis pathway

Page 12: Metabolism of Bioactive Endogenous and Exogenous Compoundsbrandt/Chem430/Xenobiotic_and... · Metabolism of Bioactive Endogenous and Exogenous Compounds Oxidation Dehydrogenases Oxidases

CYP11 CYP11A1 CYP11B1 CYP11B2

Mitochondrial steroid hormone biosynthesis enzymes 11A1 is cholesterol side-chain cleavage enzyme, the main regulated step in steroid hormone biosynthesis. 11B1 is 11β-hydroxylase 11B2 is 18-hydroxylase

CYP17 CYP17A1 17α-hydroxylase/17-20 lyase in steroid hormone biosynthesis pathway

CYP19 CYP19A1 Aromatase CYP20 CYP20A1 Present in many species, but deviates from P450 consensus

sequence; function unknown CYP21 CYP21A2 21-hydroxylase (pseudogene nearby causes high rate of

inborn errors) CYP24 CYP24A1 24-hydroxylase for 1α-25-dihydroxyvitamin D in breakdown

pathway CYP26 CYP26A1

CYP26B1 CYP26C1

Retinoid 4-hydroxylase and 18 hydroxylase

CYP27 CYP27A1 CYP27B1 CYP27C1

27A1 hydroxylase in bile acid synthesis pathway 27B1 1α-hydroxylase of 25-hydroxyvitamin D; catalyzes regulated activation step for vitamin D 27C1 function unknown

CYP39 CYP39A1 7α-hydroxylase in bile acid synthesis pathway CYP46 CYP46A1 Cholesterol 24S-hydroxylase in brain CYP51 CYP51A1 Lanosterol 14-demethylase in cholesterol synthesis pathway Inducers and inhibitors

HN

NH

O

O OPhenobarbital

O OO

O

Bergamottin

O OO

O

Dihydroxybergamottin

OH

HO

Page 13: Metabolism of Bioactive Endogenous and Exogenous Compoundsbrandt/Chem430/Xenobiotic_and... · Metabolism of Bioactive Endogenous and Exogenous Compounds Oxidation Dehydrogenases Oxidases

Tamoxifen Metabolism

Additional demethylation Isomerization Sulfotransferases N- and O-glucuronide formation

ONCH3

CH3

Tamoxifen

Cytochrome P4503A4

Cytochrome P4502D6

others

ONH

CH3

N-desmethyltamoxifen

Cytochrome P4503A4

Cytochrome P4502D6

othersO

NCH3

CH3

trans-4-hydroxytamoxifen

HO

Cytochrome P4502D6

ONH

CH3

(Z)-endoxifen

HO

Cytochrome P4503A4

Cytochrome P4502D6

others

Page 14: Metabolism of Bioactive Endogenous and Exogenous Compoundsbrandt/Chem430/Xenobiotic_and... · Metabolism of Bioactive Endogenous and Exogenous Compounds Oxidation Dehydrogenases Oxidases

Estrogens and Related Compounds

HO17β-Estradiol

HO

OH

Diethylstilbestrol(DES)

OH

HOEquilin

O

HOEthinylestradiol

OH

O

OOH

HO

OH

Genistein

O

O

OH

O

HOCoumestrol

ON

Tamoxifen

SOH

O

ON

HO

Raloxifene

Page 15: Metabolism of Bioactive Endogenous and Exogenous Compoundsbrandt/Chem430/Xenobiotic_and... · Metabolism of Bioactive Endogenous and Exogenous Compounds Oxidation Dehydrogenases Oxidases

Members of the Nuclear Receptor Superfamily

Receptor Ligand Length (residues) Chromosome

Thyroid hormone-α Thyroid hormone-β (triiodothyronine)

490 456

17 3

Vitamin D (1α,25-dihydroxyvitamin D)

427 12

Retinoic acid-α Retinoic acid-β Retinoic acid-γ (all trans retinoic acid)

462 448 454

17 3

12

Retinoid-X-α Retinoid-X-β Retinoid-X-γ (9-cis-retinoic acid)

462 533 454

9 6 1

Estrogen-α Estrogen-β (estradiol)

595 530

6 14

Glucocorticoid (GR type II) (cortisol)

777 5

Mineralocorticoid (GR type I) (aldosterone)

984 4

Androgen (testosterone)

919 X

Progesterone (progesterone)

769 (A) 933 (B) 11

O

NH3

OO

I

I

I

HO

HO

OH

OH

O

O

OO

OH

HO

O

OH

O

OHHO

O

O

OH

HO

O

O

OH

O

O

Page 16: Metabolism of Bioactive Endogenous and Exogenous Compoundsbrandt/Chem430/Xenobiotic_and... · Metabolism of Bioactive Endogenous and Exogenous Compounds Oxidation Dehydrogenases Oxidases

Domain Structure of the Nuclear Receptors

Variable (A/B) DBD (C) D LBD (E) F

Variable Domain DNA-binding Domain (DBD)

hinge Ligand-Binding Domain (HBD)

None ?

Dimerization Dimerization

Transactivation Transactivation Transactivation

hsp90 binding

hsp90 binding

Nuclear localization

Nuclear localization

Highly Conserved Somewhat conserved

LBDVariable DBD

Page 17: Metabolism of Bioactive Endogenous and Exogenous Compoundsbrandt/Chem430/Xenobiotic_and... · Metabolism of Bioactive Endogenous and Exogenous Compounds Oxidation Dehydrogenases Oxidases

Features of Selected Receptor Proteins

DNA Binding Domain

Ligand- Binding Domain

Receptor Size of

variable domain

Size (amino acids)

% Identity

Size (amino acids)

% Identity

Glucocorticoid (GR Type II)

421 66 100 250 100

Mineralocorticoid (GR Type I)

603 66 94 251 57

Progesterone 567 66 90 255 55 Androgen 559 66 91 243 52

Estrogen-α 180 66 53 250 30 Thyroid hormone-β 102 67 47 225 17

Retinoic acid-α 88 66 45 265 15 Vitamin D 24 66 42 236 <15%

Page 18: Metabolism of Bioactive Endogenous and Exogenous Compoundsbrandt/Chem430/Xenobiotic_and... · Metabolism of Bioactive Endogenous and Exogenous Compounds Oxidation Dehydrogenases Oxidases

(from pdb ID 3DZY)

L

LL

LL

L

RNA

Page 19: Metabolism of Bioactive Endogenous and Exogenous Compoundsbrandt/Chem430/Xenobiotic_and... · Metabolism of Bioactive Endogenous and Exogenous Compounds Oxidation Dehydrogenases Oxidases

pdb ID 3ERD (ER LBD Dimer bound to DES and LXXLL peptide)

Overlay of pdb ID 1QKU (estradiol bound ER LBD) and 3ERT (4-hydroxytamoxifen bound ER LBD)

Page 20: Metabolism of Bioactive Endogenous and Exogenous Compoundsbrandt/Chem430/Xenobiotic_and... · Metabolism of Bioactive Endogenous and Exogenous Compounds Oxidation Dehydrogenases Oxidases

Nuclear Receptor Superfamily in Humans (from NURSA.org) Family Gene Name Ligand Comments NR1 NR1A1 TRα triiodothyronine Broad expression; especially CNS

NR1A2

TRβ

triiodothyronine

Broad expression; T3 resistance observed in homozygotes for mutants

NR1B1

RARα

retinoid acid

Broad expression; especially eye, kidney, uterus, testis; dysfunction: cleft palate, and schizophrenia, psychiatric abnormalities

NR1B2

RARβ

retinoid acid

Broad expression; especially brain, heart, and skeletal muscle; dysfunction: schizophrenia autism, alcoholism, ADHD, and bipolar disorder.

NR1B3

RARγ

retinoid acid

Broad expression; especially eye, kidney,

endocrine organs, heart, and skin; dysfunction: schizophrenia, psychiatric abnormalities

NR1C1

PPARα

fatty acids

Expressed in brown adipose, liver, kidney, digestive tract, and heart; dysfunction: Type II diabetes, heart disease, metabolic

disorders.

NR1C2

PPARδ

fatty acids

Expression in digestive tract and most other tissues; dysfunction: Type II diabetes and other metabolic disorders, and Alzheimer’s disease.

NR1C3

PPARγ

fatty acids

Expressed in brown adipose, and low levels in most tissues; dysfunction: breast, lung, colon, and other cancers, Type II diabetes and other metabolic disorders, and Alzheimer’s disease.

NR1D1

Rev-Erbα

orphan; heme? Broad expression; especially CNS; constitutive repressor

NR1D2

Rev-Erbβ

orphan; heme? Broad expression; especially CNS; constitutive repressor

NR1F1 RORα orphan

Broad expression, especially CNS, testis, and

skeletal muscle; constitutive activator

NR1F2 RORβ orphan Expressed in CNS; constitutive activator

NR1F3 RORγ orphan Broad expression; especially digestive tract, liver, kidney, and thymus; constitutive activator

NR1H2 LXRβ oxysterols Broad expression; especially brain, pituitary, thyroid, kidney; responsible for liver cholesterol homeostasis.

NR1H3 LXRα oxysterols Broad expression; especially gall bladder, liver, kidney, adipose tissue; dysfunction:

gallstones, altered lipid levels. Probably cholesterol sensor.

NR1H4 FXRα bile acids Expressed in digestive tract, liver, kidney (note that FXRβ is a pseudogene in humans, but is function in rodents)

Page 21: Metabolism of Bioactive Endogenous and Exogenous Compoundsbrandt/Chem430/Xenobiotic_and... · Metabolism of Bioactive Endogenous and Exogenous Compounds Oxidation Dehydrogenases Oxidases

NR1I1 VDR 1α, 25-dihydroxyvitamin D

Broad expression, especially in digestive tract (especially intestines), kidney, thyroid, and bone; dysfunction: bone disorders,

cancer, heart disease, immune dysfunction and autoimmune diseases, and amyotrophic lateral sclerosis, and Alzheimer’s.

NR1I2 PXR xenobiotics Expressed in digestive tract and liver; dysfunction: immune disorders (such as

inflammatory bowel disease) and cirrhosis.

NR1I3 CAR xenobiotics Expressed in digestive tract and liver.

Family Gene Name Ligand Comments NR2 NR2A1 HNF4α orphan (fatty

acids) Expressed in digestive tract and liver; dysfunction: Type II diabetes, metabolic syndrome, and kidney failure.

NR2A2 HNF4γ orphan (fatty acids)

Expressed in digestive tract and liver, and kidney.

NR2B1 RXRα 9-cis-retinoic acid Broad expression; especially liver, skeletal muscle, and skin; dysfunction: schizophrenia, psychiatric abnormalities, and immune disorders.

NR2B2 RXRβ 9-cis-retinoic acid Broad expression; especially CNS, endocrine organs, and skin; dysfunction: Type I

diabetes and other immune disorders, schizophrenia, and psychiatric abnormalities.

NR2B3 RXRγ 9-cis-retinoic acid Broad expression; especially CNS, endocrine organs, liver, heart, skeletal muscle, bone, and skin; dysfunction: Type II diabetes

disorders, schizophrenia, and psychiatric abnormalities.

NR2C1 TR2 orphan Broad expression; especially testis; acts as negative regulator of AR and ERα.

NR2C2 TR4 orphan Broad expression; especially kidney, thymus,

and testis

NR2E1 TLX orphan Expressed in cerebrum and corpus striatum; homolog of tailless.

NR2E3 PNR orphan Expressed in retina photoreceptors; dysfunction: retinitis pigmentosa.

NR2F1 COUP-TFI

orphan Broad expression; especially nervous system

NR2F2 COUP-TFII

orphan Broad expression; especially endocrine organs; involved in angiogenesis and cardiovascular development.

NR2F6 EAR2 orphan Broad expression; especially endocrine organs; involved in neuronal development, and negative regulation of renin.

Page 22: Metabolism of Bioactive Endogenous and Exogenous Compoundsbrandt/Chem430/Xenobiotic_and... · Metabolism of Bioactive Endogenous and Exogenous Compounds Oxidation Dehydrogenases Oxidases

Family Gene Name Ligand Comments NR3 NR3A1 ERα estradiol Broad expression; especially in pituitary,

ovary, uterus, and vas deferens; dysfunction: breast cancer, and several other cancer types, heart disease, autoimmune diseases, osteoporosis, neurodegenerative diseases (Alzheimer’s and Parkinson’s and other dementias), anorexia, ADHD, psychosis, and

reproductive defects.

NR3A2 ERβ estradiol Expressed in ovary, CNS, colon, lung, and prostate; dysfunction: breast cancer, and several other cancer types, heart disease, osteoporosis, neurodegenerative diseases (Alzheimer’s and Parkinson’s and other

dementias), anorexia, and reproductive defects.

NR3B1 ERRα orphan Broad expression; dysfunction: osteoporosis and Type II diabetes. (Note: although related to estrogen receptor, ERRα is not activated by

estradiol.

NR3B2 ERRβ orphan Broad expression, especially placenta, kidney, thyroid, testis, and heart; dysfunction: deafness. (Note: although related to estrogen receptor, ERRβ is not activated by estradiol.

NR3B3 ERRγ orphan Broad expression, especially CNS. (Note: although related to estrogen receptor, ERRγ is not activated by estradiol.

NR3C1 GR cortisol Expressed in all tissues; dysfunction: metabolic disorders, heart disease, immune

disorders, psychiatric disorders, and kidney disorders.

NR3C2 MR aldosterone cortisol

Expressed in all tissues; dysfunction: aldosterone resistance, hypertension, psychiatric disorders, and preeclampsia.

NR3C3 PR progesterone Broad expression, especially in ovary, uterus, hypothalamus, and CNS; dysfunction: cancer of breast, ovary, uterus, and prostate, osteoporosis, aneurysm, and reproductive defects.

NR3C4 AR DHT testosterone

Broad expression, especially in reproductive tract and skeletal muscle; dysfunction: cancer of prostate, ovary, colon, testis, Type I diabetes, metabolic disorders including Type II diabetes, ADHD, depression, schizophrenia, and reproductive defects.

Page 23: Metabolism of Bioactive Endogenous and Exogenous Compoundsbrandt/Chem430/Xenobiotic_and... · Metabolism of Bioactive Endogenous and Exogenous Compounds Oxidation Dehydrogenases Oxidases

Family Gene Name Ligand Comments NR4 NR4A1 Nur77 orphan Broad expression, especially in adrenal,

testis, lung, and skeletal muscle; involved in apoptosis and hypothalamic-pituitary axis signaling.

NR4A2 NURR1 orphan Broad expression, especially in CNS; involve in development of dopaminergic neurons and in regulation of stress responses; dysfunction:

Parkinson’s and ADHD.

NR4A3 NOR1 orphan Broad expression, especially in CNS; involved in hypothalamic-pituitary axis signaling and in regulation of stress responses.

NR5 NR5A1 SF-1 orphan Expressed in adrenal, ovary, testis, and

hypothalamus; dysfunction: decreased steroid production in adrenal, ovary, and testis, and in Type II diabetes.

NR5A2 LRH-1 orphan Expressed in digestive tract, liver, and ovary; involved in bile acid and cholesterol homeostasis.

NR6 NR6A1 GCNF orphan Broad expression at low levels, high levels in

testis; involved in embryogenesis.

NR0 NR0B1 DAX1 orphan; lacks DBD

Expressed in reproductive tissues, pituitary and hypothalamus; dysfunction is associated with hypoplasia of adrenal and gonads; acts

via inhibition of SF-1, ER, and AR DNA binding by forming heterodimers.

NR0B2 SHP orphan; lacks DBD

Expressed in adrenal, pancreas, liver, kidney, heart, lungs, and gonads; dysfunction: obesity and Type II diabetes.

Page 24: Metabolism of Bioactive Endogenous and Exogenous Compoundsbrandt/Chem430/Xenobiotic_and... · Metabolism of Bioactive Endogenous and Exogenous Compounds Oxidation Dehydrogenases Oxidases

Ligands

HO

1α,25-Dihydroxy-vitamin D3(Calcitriol)

OH

OHO

NH3

OO

I

I

I

HO

3,5,3´-triiodothyronine(Thyroid hormone T3)

OO9-cis-Retinoic acid

O

O

all-trans-Retinoic acid

Pioglitazone(a type of thiazolidinedione)

O NH

SO

O

NH3C

HO 24(S),25-epoxycholesterol

O

Fe2+

N

N

N

N

O

O

O

O

Iron-Protoporphyrin IX

Page 25: Metabolism of Bioactive Endogenous and Exogenous Compoundsbrandt/Chem430/Xenobiotic_and... · Metabolism of Bioactive Endogenous and Exogenous Compounds Oxidation Dehydrogenases Oxidases

Ligands

HO

OH

OH

O

O

H

Cholic acidHO

OHO

O

H

Deoxycholic acidHO

OHO

NH

H

Taurocholic acid

SO

OO

O

O

5β-pregnane-3,20-dioneH

O

OH

Testosterone

OH

HOEstradiol

5α-androstan-3α-olH

HO

HN

NH

O

O OPhenobarbital

NH O O

N

OH

O

N

N O

OHO

O

O

H

H

Vinblastine

Page 26: Metabolism of Bioactive Endogenous and Exogenous Compoundsbrandt/Chem430/Xenobiotic_and... · Metabolism of Bioactive Endogenous and Exogenous Compounds Oxidation Dehydrogenases Oxidases

Ace

tyl-

CoA

Ch

oles

tero

l

Fat

ty A

cids

β-ox

idat

ion

Bil

e ac

ids

Bil

e ac

idco

nju

gati

onan

d e

xcre

tion

Ch

oles

tero

lsy

nth

esis

Fat

ty a

cid

syn

thes

isB

ile

acid

syn

thes

is

Bil

e ac

idm

etab

olit

es

Tri

acyl

glyc

erol

s

TA

Gsy

nth

esis

Ace

tyl-

CoA

LX

R(l

imit

edef

fect

iven

ess

in h

um

an

s)

(+)

(–)

Isop

ren

oids

Lan

oste

rol

FX

RP

XR

FX

RP

XR

CA

RV

DR

(+)

7α-h

ydro

xy-

chol

este

rol

CY

P7A

1

(–)

PX

RC

AR

(–)

(–)

PP

AR

(+)

LX

R(–

)

LX

R

(–)

LX

R

(+)

(–)

FX

R

(–)

FX

R

Page 27: Metabolism of Bioactive Endogenous and Exogenous Compoundsbrandt/Chem430/Xenobiotic_and... · Metabolism of Bioactive Endogenous and Exogenous Compounds Oxidation Dehydrogenases Oxidases

Ligands

HO

Diethylstilbestrol(DES)

OH

HOEthinylestradiol

OH

HOEstrone

O

HOEquilin

O

HO

O

O

O

OH

O

O OH

OH

HOGenistein

Coumestrol

OH

HO

HO

OH

OH

EstriolEstradiol

OH

HO

S

O

CF3

FF

Fulvestrant

ON

Tamoxifen

SOH

O

ON

HO

Raloxifene

HO OHBisphenol A

O

OH

Testosterone