Metabolism of Bioactive Endogenous and Exogenous Compounds Oxidation Dehydrogenases Oxidases Cytochrome P450 enzymes Reduction Dehydrogenases Reductases Conjugation Sulfotransferases 3´-Phosphoadenosine 5´-phosphosulfate (PAPS) 3´,5´-adenosine bisphosphate sulfotransferase R OH R O S O O O O S O O O OH O CH 2 O N N N N NH 2 P O O O P O O O 3´-Phosphoadenosine 5´-phosphosulfate (PAPS)
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Metabolism of Bioactive Endogenous and Exogenous Compounds Oxidation Dehydrogenases Oxidases Cytochrome P450 enzymes Reduction Dehydrogenases Reductases Conjugation Sulfotransferases
CYP5 CYP5A1 Platelet thromboxane A synthase 1 CYP7 CYP7A1
CYP7B1 7A1 is liver enzyme: 7α-hydroxylase; catalyzes the main regulated step in bile acid synthesis 7B1 is non-liver, and may be involved in steroid metabolism
CYP8 CYP8A1 CYP8B1
8A1 is prostaglandin I2 (prostacyclin) synthase 8B1 intronless; 12α-hydroxylase in bile acid synthesis pathway
CYP11 CYP11A1 CYP11B1 CYP11B2
Mitochondrial steroid hormone biosynthesis enzymes 11A1 is cholesterol side-chain cleavage enzyme, the main regulated step in steroid hormone biosynthesis. 11B1 is 11β-hydroxylase 11B2 is 18-hydroxylase
CYP17 CYP17A1 17α-hydroxylase/17-20 lyase in steroid hormone biosynthesis pathway
CYP19 CYP19A1 Aromatase CYP20 CYP20A1 Present in many species, but deviates from P450 consensus
sequence; function unknown CYP21 CYP21A2 21-hydroxylase (pseudogene nearby causes high rate of
inborn errors) CYP24 CYP24A1 24-hydroxylase for 1α-25-dihydroxyvitamin D in breakdown
pathway CYP26 CYP26A1
CYP26B1 CYP26C1
Retinoid 4-hydroxylase and 18 hydroxylase
CYP27 CYP27A1 CYP27B1 CYP27C1
27A1 hydroxylase in bile acid synthesis pathway 27B1 1α-hydroxylase of 25-hydroxyvitamin D; catalyzes regulated activation step for vitamin D 27C1 function unknown
CYP39 CYP39A1 7α-hydroxylase in bile acid synthesis pathway CYP46 CYP46A1 Cholesterol 24S-hydroxylase in brain CYP51 CYP51A1 Lanosterol 14-demethylase in cholesterol synthesis pathway Inducers and inhibitors
HN
NH
O
O OPhenobarbital
O OO
O
Bergamottin
O OO
O
Dihydroxybergamottin
OH
HO
Tamoxifen Metabolism
Additional demethylation Isomerization Sulfotransferases N- and O-glucuronide formation
pdb ID 3ERD (ER LBD Dimer bound to DES and LXXLL peptide)
Overlay of pdb ID 1QKU (estradiol bound ER LBD) and 3ERT (4-hydroxytamoxifen bound ER LBD)
Nuclear Receptor Superfamily in Humans (from NURSA.org) Family Gene Name Ligand Comments NR1 NR1A1 TRα triiodothyronine Broad expression; especially CNS
NR1A2
TRβ
triiodothyronine
Broad expression; T3 resistance observed in homozygotes for mutants
NR1B1
RARα
retinoid acid
Broad expression; especially eye, kidney, uterus, testis; dysfunction: cleft palate, and schizophrenia, psychiatric abnormalities
NR1B2
RARβ
retinoid acid
Broad expression; especially brain, heart, and skeletal muscle; dysfunction: schizophrenia autism, alcoholism, ADHD, and bipolar disorder.
NR1B3
RARγ
retinoid acid
Broad expression; especially eye, kidney,
endocrine organs, heart, and skin; dysfunction: schizophrenia, psychiatric abnormalities
NR1C1
PPARα
fatty acids
Expressed in brown adipose, liver, kidney, digestive tract, and heart; dysfunction: Type II diabetes, heart disease, metabolic
disorders.
NR1C2
PPARδ
fatty acids
Expression in digestive tract and most other tissues; dysfunction: Type II diabetes and other metabolic disorders, and Alzheimer’s disease.
NR1C3
PPARγ
fatty acids
Expressed in brown adipose, and low levels in most tissues; dysfunction: breast, lung, colon, and other cancers, Type II diabetes and other metabolic disorders, and Alzheimer’s disease.
NR1D1
Rev-Erbα
orphan; heme? Broad expression; especially CNS; constitutive repressor
NR1D2
Rev-Erbβ
orphan; heme? Broad expression; especially CNS; constitutive repressor
NR1F1 RORα orphan
Broad expression, especially CNS, testis, and
skeletal muscle; constitutive activator
NR1F2 RORβ orphan Expressed in CNS; constitutive activator
NR1F3 RORγ orphan Broad expression; especially digestive tract, liver, kidney, and thymus; constitutive activator
NR1H2 LXRβ oxysterols Broad expression; especially brain, pituitary, thyroid, kidney; responsible for liver cholesterol homeostasis.
NR1H3 LXRα oxysterols Broad expression; especially gall bladder, liver, kidney, adipose tissue; dysfunction:
NR1H4 FXRα bile acids Expressed in digestive tract, liver, kidney (note that FXRβ is a pseudogene in humans, but is function in rodents)
NR1I1 VDR 1α, 25-dihydroxyvitamin D
Broad expression, especially in digestive tract (especially intestines), kidney, thyroid, and bone; dysfunction: bone disorders,
cancer, heart disease, immune dysfunction and autoimmune diseases, and amyotrophic lateral sclerosis, and Alzheimer’s.
NR1I2 PXR xenobiotics Expressed in digestive tract and liver; dysfunction: immune disorders (such as
inflammatory bowel disease) and cirrhosis.
NR1I3 CAR xenobiotics Expressed in digestive tract and liver.
Family Gene Name Ligand Comments NR2 NR2A1 HNF4α orphan (fatty
acids) Expressed in digestive tract and liver; dysfunction: Type II diabetes, metabolic syndrome, and kidney failure.
NR2A2 HNF4γ orphan (fatty acids)
Expressed in digestive tract and liver, and kidney.
NR2B1 RXRα 9-cis-retinoic acid Broad expression; especially liver, skeletal muscle, and skin; dysfunction: schizophrenia, psychiatric abnormalities, and immune disorders.
NR2B2 RXRβ 9-cis-retinoic acid Broad expression; especially CNS, endocrine organs, and skin; dysfunction: Type I
diabetes and other immune disorders, schizophrenia, and psychiatric abnormalities.
NR2B3 RXRγ 9-cis-retinoic acid Broad expression; especially CNS, endocrine organs, liver, heart, skeletal muscle, bone, and skin; dysfunction: Type II diabetes
disorders, schizophrenia, and psychiatric abnormalities.
NR2C1 TR2 orphan Broad expression; especially testis; acts as negative regulator of AR and ERα.
NR2C2 TR4 orphan Broad expression; especially kidney, thymus,
and testis
NR2E1 TLX orphan Expressed in cerebrum and corpus striatum; homolog of tailless.
NR2E3 PNR orphan Expressed in retina photoreceptors; dysfunction: retinitis pigmentosa.
NR2F1 COUP-TFI
orphan Broad expression; especially nervous system
NR2F2 COUP-TFII
orphan Broad expression; especially endocrine organs; involved in angiogenesis and cardiovascular development.
NR2F6 EAR2 orphan Broad expression; especially endocrine organs; involved in neuronal development, and negative regulation of renin.
Family Gene Name Ligand Comments NR3 NR3A1 ERα estradiol Broad expression; especially in pituitary,
ovary, uterus, and vas deferens; dysfunction: breast cancer, and several other cancer types, heart disease, autoimmune diseases, osteoporosis, neurodegenerative diseases (Alzheimer’s and Parkinson’s and other dementias), anorexia, ADHD, psychosis, and
reproductive defects.
NR3A2 ERβ estradiol Expressed in ovary, CNS, colon, lung, and prostate; dysfunction: breast cancer, and several other cancer types, heart disease, osteoporosis, neurodegenerative diseases (Alzheimer’s and Parkinson’s and other
dementias), anorexia, and reproductive defects.
NR3B1 ERRα orphan Broad expression; dysfunction: osteoporosis and Type II diabetes. (Note: although related to estrogen receptor, ERRα is not activated by
estradiol.
NR3B2 ERRβ orphan Broad expression, especially placenta, kidney, thyroid, testis, and heart; dysfunction: deafness. (Note: although related to estrogen receptor, ERRβ is not activated by estradiol.
NR3B3 ERRγ orphan Broad expression, especially CNS. (Note: although related to estrogen receptor, ERRγ is not activated by estradiol.
NR3C1 GR cortisol Expressed in all tissues; dysfunction: metabolic disorders, heart disease, immune
disorders, psychiatric disorders, and kidney disorders.
NR3C2 MR aldosterone cortisol
Expressed in all tissues; dysfunction: aldosterone resistance, hypertension, psychiatric disorders, and preeclampsia.
NR3C3 PR progesterone Broad expression, especially in ovary, uterus, hypothalamus, and CNS; dysfunction: cancer of breast, ovary, uterus, and prostate, osteoporosis, aneurysm, and reproductive defects.
NR3C4 AR DHT testosterone
Broad expression, especially in reproductive tract and skeletal muscle; dysfunction: cancer of prostate, ovary, colon, testis, Type I diabetes, metabolic disorders including Type II diabetes, ADHD, depression, schizophrenia, and reproductive defects.
Family Gene Name Ligand Comments NR4 NR4A1 Nur77 orphan Broad expression, especially in adrenal,
testis, lung, and skeletal muscle; involved in apoptosis and hypothalamic-pituitary axis signaling.
NR4A2 NURR1 orphan Broad expression, especially in CNS; involve in development of dopaminergic neurons and in regulation of stress responses; dysfunction:
Parkinson’s and ADHD.
NR4A3 NOR1 orphan Broad expression, especially in CNS; involved in hypothalamic-pituitary axis signaling and in regulation of stress responses.
NR5 NR5A1 SF-1 orphan Expressed in adrenal, ovary, testis, and
hypothalamus; dysfunction: decreased steroid production in adrenal, ovary, and testis, and in Type II diabetes.
NR5A2 LRH-1 orphan Expressed in digestive tract, liver, and ovary; involved in bile acid and cholesterol homeostasis.
NR6 NR6A1 GCNF orphan Broad expression at low levels, high levels in
testis; involved in embryogenesis.
NR0 NR0B1 DAX1 orphan; lacks DBD
Expressed in reproductive tissues, pituitary and hypothalamus; dysfunction is associated with hypoplasia of adrenal and gonads; acts
via inhibition of SF-1, ER, and AR DNA binding by forming heterodimers.
NR0B2 SHP orphan; lacks DBD
Expressed in adrenal, pancreas, liver, kidney, heart, lungs, and gonads; dysfunction: obesity and Type II diabetes.