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Inside the Cell 7.1 What’s Inside the Cell? Prokaryotic Cells Eukaryotic Cells The Nucleus – Ribosomes Rough Endoplasmic Reticulum Golgi Apparatus Smooth Endoplasmic Reticulum – Peroxisomes – Lysosomes – Mitochondria – Chloroplasts – Cytoskeleton The Cell Wall How Does Cell Structure Correlate with Function? The Dynamic Cell
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Inside the Cell 7.1 What’s Inside the Cell? Prokaryotic Cells Eukaryotic Cells –The Nucleus –Ribosomes –Rough Endoplasmic Reticulum –Golgi Apparatus –Smooth.

Dec 22, 2015

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Page 1: Inside the Cell 7.1 What’s Inside the Cell? Prokaryotic Cells Eukaryotic Cells –The Nucleus –Ribosomes –Rough Endoplasmic Reticulum –Golgi Apparatus –Smooth.

Inside the Cell7.1 What’s Inside the Cell?

Prokaryotic CellsEukaryotic Cells– The Nucleus– Ribosomes– Rough Endoplasmic Reticulum– Golgi Apparatus– Smooth Endoplasmic Reticulum– Peroxisomes– Lysosomes– Mitochondria– Chloroplasts– Cytoskeleton– The Cell Wall

How Does Cell Structure Correlate with Function? The Dynamic Cell

Page 2: Inside the Cell 7.1 What’s Inside the Cell? Prokaryotic Cells Eukaryotic Cells –The Nucleus –Ribosomes –Rough Endoplasmic Reticulum –Golgi Apparatus –Smooth.

7.2 The Nuclear Envelope: Transport Into and Out of the NucleusHow Are Molecules Imported into the Nucleus?How Are Molecules Exported from the Cell

7.3 The Endomembrane System: Manufacturing and Shipping ProteinsEntering the Endomembrane System: The Signal HypothesisGetting from the ER to the GolgiWhat Happens Inside the Golgi Apparatus? How are Products Shipped from the Golgi?

Page 3: Inside the Cell 7.1 What’s Inside the Cell? Prokaryotic Cells Eukaryotic Cells –The Nucleus –Ribosomes –Rough Endoplasmic Reticulum –Golgi Apparatus –Smooth.

7.4 The Dynamic CytoskeletonActin FilamentsIntermediate FilamentsMicrotubules– Studying Vesicle Transport– Microtubules Act as “Railroad Tracks”– A Motor Protein Generates Motile Forces

Cilia and Flagella: Moving the Entire Cell– How Are Cilia and Flagella Constructed?– A Motor Protein in the Axoneme

Page 4: Inside the Cell 7.1 What’s Inside the Cell? Prokaryotic Cells Eukaryotic Cells –The Nucleus –Ribosomes –Rough Endoplasmic Reticulum –Golgi Apparatus –Smooth.

KEY CONCEPTS• The structure of cell components is closely

correlated with their function.

• Inside cells, materials are transported to their destinations using molecular “zip codes.”

• Cells are complex, dynamic ever-changing factories, each with their own particular program that depends on their own genes, surroundings and developmental history.

Page 5: Inside the Cell 7.1 What’s Inside the Cell? Prokaryotic Cells Eukaryotic Cells –The Nucleus –Ribosomes –Rough Endoplasmic Reticulum –Golgi Apparatus –Smooth.

KEY CONCEPTS

• Cells are dynamic. Thousands of chemical reactions occur each second within cells; molecules constantly enter and exit across the plasma membrane; cell products are shipped along protein fibers; and elements of the cell’s internal skeleton grow and shrink.

Page 6: Inside the Cell 7.1 What’s Inside the Cell? Prokaryotic Cells Eukaryotic Cells –The Nucleus –Ribosomes –Rough Endoplasmic Reticulum –Golgi Apparatus –Smooth.

Prokaryotic CellsGram positive bacteria: single cell membrane with thick peptidoglycan (Staph; strep) Gram negative bacteria: double cell membrane with single layer of peptidoglycan between (E. coli; Pseudomonas; Vibrio cholera)

Archaea: third biological kingdom – adaptations to withstand major stresses of pH and temperature; more like eukaryotes in their informational machinery (ribosomes, RNA synthesis, etc.)

Page 7: Inside the Cell 7.1 What’s Inside the Cell? Prokaryotic Cells Eukaryotic Cells –The Nucleus –Ribosomes –Rough Endoplasmic Reticulum –Golgi Apparatus –Smooth.
Page 8: Inside the Cell 7.1 What’s Inside the Cell? Prokaryotic Cells Eukaryotic Cells –The Nucleus –Ribosomes –Rough Endoplasmic Reticulum –Golgi Apparatus –Smooth.
Page 9: Inside the Cell 7.1 What’s Inside the Cell? Prokaryotic Cells Eukaryotic Cells –The Nucleus –Ribosomes –Rough Endoplasmic Reticulum –Golgi Apparatus –Smooth.
Page 10: Inside the Cell 7.1 What’s Inside the Cell? Prokaryotic Cells Eukaryotic Cells –The Nucleus –Ribosomes –Rough Endoplasmic Reticulum –Golgi Apparatus –Smooth.
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Eukaryotic Cells

Page 13: Inside the Cell 7.1 What’s Inside the Cell? Prokaryotic Cells Eukaryotic Cells –The Nucleus –Ribosomes –Rough Endoplasmic Reticulum –Golgi Apparatus –Smooth.
Page 14: Inside the Cell 7.1 What’s Inside the Cell? Prokaryotic Cells Eukaryotic Cells –The Nucleus –Ribosomes –Rough Endoplasmic Reticulum –Golgi Apparatus –Smooth.
Page 15: Inside the Cell 7.1 What’s Inside the Cell? Prokaryotic Cells Eukaryotic Cells –The Nucleus –Ribosomes –Rough Endoplasmic Reticulum –Golgi Apparatus –Smooth.

The Nucleus

Page 16: Inside the Cell 7.1 What’s Inside the Cell? Prokaryotic Cells Eukaryotic Cells –The Nucleus –Ribosomes –Rough Endoplasmic Reticulum –Golgi Apparatus –Smooth.
Page 17: Inside the Cell 7.1 What’s Inside the Cell? Prokaryotic Cells Eukaryotic Cells –The Nucleus –Ribosomes –Rough Endoplasmic Reticulum –Golgi Apparatus –Smooth.
Page 18: Inside the Cell 7.1 What’s Inside the Cell? Prokaryotic Cells Eukaryotic Cells –The Nucleus –Ribosomes –Rough Endoplasmic Reticulum –Golgi Apparatus –Smooth.
Page 19: Inside the Cell 7.1 What’s Inside the Cell? Prokaryotic Cells Eukaryotic Cells –The Nucleus –Ribosomes –Rough Endoplasmic Reticulum –Golgi Apparatus –Smooth.
Page 20: Inside the Cell 7.1 What’s Inside the Cell? Prokaryotic Cells Eukaryotic Cells –The Nucleus –Ribosomes –Rough Endoplasmic Reticulum –Golgi Apparatus –Smooth.
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Page 22: Inside the Cell 7.1 What’s Inside the Cell? Prokaryotic Cells Eukaryotic Cells –The Nucleus –Ribosomes –Rough Endoplasmic Reticulum –Golgi Apparatus –Smooth.
Page 23: Inside the Cell 7.1 What’s Inside the Cell? Prokaryotic Cells Eukaryotic Cells –The Nucleus –Ribosomes –Rough Endoplasmic Reticulum –Golgi Apparatus –Smooth.
Page 24: Inside the Cell 7.1 What’s Inside the Cell? Prokaryotic Cells Eukaryotic Cells –The Nucleus –Ribosomes –Rough Endoplasmic Reticulum –Golgi Apparatus –Smooth.
Page 25: Inside the Cell 7.1 What’s Inside the Cell? Prokaryotic Cells Eukaryotic Cells –The Nucleus –Ribosomes –Rough Endoplasmic Reticulum –Golgi Apparatus –Smooth.
Page 26: Inside the Cell 7.1 What’s Inside the Cell? Prokaryotic Cells Eukaryotic Cells –The Nucleus –Ribosomes –Rough Endoplasmic Reticulum –Golgi Apparatus –Smooth.
Page 27: Inside the Cell 7.1 What’s Inside the Cell? Prokaryotic Cells Eukaryotic Cells –The Nucleus –Ribosomes –Rough Endoplasmic Reticulum –Golgi Apparatus –Smooth.

Mitochondria: cellular power plants

Page 28: Inside the Cell 7.1 What’s Inside the Cell? Prokaryotic Cells Eukaryotic Cells –The Nucleus –Ribosomes –Rough Endoplasmic Reticulum –Golgi Apparatus –Smooth.

Chloroplasts, for photosynthesis in plants

Page 29: Inside the Cell 7.1 What’s Inside the Cell? Prokaryotic Cells Eukaryotic Cells –The Nucleus –Ribosomes –Rough Endoplasmic Reticulum –Golgi Apparatus –Smooth.

Plant Cell Walls

Page 30: Inside the Cell 7.1 What’s Inside the Cell? Prokaryotic Cells Eukaryotic Cells –The Nucleus –Ribosomes –Rough Endoplasmic Reticulum –Golgi Apparatus –Smooth.

Cell Structure-Function Relationships

Page 31: Inside the Cell 7.1 What’s Inside the Cell? Prokaryotic Cells Eukaryotic Cells –The Nucleus –Ribosomes –Rough Endoplasmic Reticulum –Golgi Apparatus –Smooth.
Page 32: Inside the Cell 7.1 What’s Inside the Cell? Prokaryotic Cells Eukaryotic Cells –The Nucleus –Ribosomes –Rough Endoplasmic Reticulum –Golgi Apparatus –Smooth.
Page 33: Inside the Cell 7.1 What’s Inside the Cell? Prokaryotic Cells Eukaryotic Cells –The Nucleus –Ribosomes –Rough Endoplasmic Reticulum –Golgi Apparatus –Smooth.

The Dynamic CellTools for understanding cell components

and structure-function relationships:

Ultracentrifugation, fluorescent and dye labeling,

Page 34: Inside the Cell 7.1 What’s Inside the Cell? Prokaryotic Cells Eukaryotic Cells –The Nucleus –Ribosomes –Rough Endoplasmic Reticulum –Golgi Apparatus –Smooth.
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Page 36: Inside the Cell 7.1 What’s Inside the Cell? Prokaryotic Cells Eukaryotic Cells –The Nucleus –Ribosomes –Rough Endoplasmic Reticulum –Golgi Apparatus –Smooth.
Page 37: Inside the Cell 7.1 What’s Inside the Cell? Prokaryotic Cells Eukaryotic Cells –The Nucleus –Ribosomes –Rough Endoplasmic Reticulum –Golgi Apparatus –Smooth.
Page 38: Inside the Cell 7.1 What’s Inside the Cell? Prokaryotic Cells Eukaryotic Cells –The Nucleus –Ribosomes –Rough Endoplasmic Reticulum –Golgi Apparatus –Smooth.

7.2 The Nuclear Envelope: Transport Into and Out

of the Nucleus

Page 39: Inside the Cell 7.1 What’s Inside the Cell? Prokaryotic Cells Eukaryotic Cells –The Nucleus –Ribosomes –Rough Endoplasmic Reticulum –Golgi Apparatus –Smooth.
Page 40: Inside the Cell 7.1 What’s Inside the Cell? Prokaryotic Cells Eukaryotic Cells –The Nucleus –Ribosomes –Rough Endoplasmic Reticulum –Golgi Apparatus –Smooth.
Page 41: Inside the Cell 7.1 What’s Inside the Cell? Prokaryotic Cells Eukaryotic Cells –The Nucleus –Ribosomes –Rough Endoplasmic Reticulum –Golgi Apparatus –Smooth.
Page 42: Inside the Cell 7.1 What’s Inside the Cell? Prokaryotic Cells Eukaryotic Cells –The Nucleus –Ribosomes –Rough Endoplasmic Reticulum –Golgi Apparatus –Smooth.
Page 43: Inside the Cell 7.1 What’s Inside the Cell? Prokaryotic Cells Eukaryotic Cells –The Nucleus –Ribosomes –Rough Endoplasmic Reticulum –Golgi Apparatus –Smooth.
Page 44: Inside the Cell 7.1 What’s Inside the Cell? Prokaryotic Cells Eukaryotic Cells –The Nucleus –Ribosomes –Rough Endoplasmic Reticulum –Golgi Apparatus –Smooth.

7.3 The Endomembrane System: Manufacturing and Shipping

Proteins

Page 45: Inside the Cell 7.1 What’s Inside the Cell? Prokaryotic Cells Eukaryotic Cells –The Nucleus –Ribosomes –Rough Endoplasmic Reticulum –Golgi Apparatus –Smooth.
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Page 50: Inside the Cell 7.1 What’s Inside the Cell? Prokaryotic Cells Eukaryotic Cells –The Nucleus –Ribosomes –Rough Endoplasmic Reticulum –Golgi Apparatus –Smooth.

Entering the Endomembrane System:

Page 51: Inside the Cell 7.1 What’s Inside the Cell? Prokaryotic Cells Eukaryotic Cells –The Nucleus –Ribosomes –Rough Endoplasmic Reticulum –Golgi Apparatus –Smooth.
Page 52: Inside the Cell 7.1 What’s Inside the Cell? Prokaryotic Cells Eukaryotic Cells –The Nucleus –Ribosomes –Rough Endoplasmic Reticulum –Golgi Apparatus –Smooth.

What happens inside the Golgi apparatus?

Page 53: Inside the Cell 7.1 What’s Inside the Cell? Prokaryotic Cells Eukaryotic Cells –The Nucleus –Ribosomes –Rough Endoplasmic Reticulum –Golgi Apparatus –Smooth.
Page 54: Inside the Cell 7.1 What’s Inside the Cell? Prokaryotic Cells Eukaryotic Cells –The Nucleus –Ribosomes –Rough Endoplasmic Reticulum –Golgi Apparatus –Smooth.

Summary:

Ions, ATP, amino acids, and other small molecules diffuse randomly throughout the cell, but the transport of proteins and other large molecules is tightly regulated and takes energy. Proteins must have the appropriate molecular zip code to enter or leave the nucleus, enter the lumen of the rough ER, or become incorporated into vesicles destined for lysosomes or the plasma membrane.

Often, proteins and other types of cargo are shipped in vesicles that contain molecular zip codes on their surface.

Page 55: Inside the Cell 7.1 What’s Inside the Cell? Prokaryotic Cells Eukaryotic Cells –The Nucleus –Ribosomes –Rough Endoplasmic Reticulum –Golgi Apparatus –Smooth.

The Dynamic Cytoskeleton

Page 56: Inside the Cell 7.1 What’s Inside the Cell? Prokaryotic Cells Eukaryotic Cells –The Nucleus –Ribosomes –Rough Endoplasmic Reticulum –Golgi Apparatus –Smooth.
Page 57: Inside the Cell 7.1 What’s Inside the Cell? Prokaryotic Cells Eukaryotic Cells –The Nucleus –Ribosomes –Rough Endoplasmic Reticulum –Golgi Apparatus –Smooth.
Page 58: Inside the Cell 7.1 What’s Inside the Cell? Prokaryotic Cells Eukaryotic Cells –The Nucleus –Ribosomes –Rough Endoplasmic Reticulum –Golgi Apparatus –Smooth.
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Page 62: Inside the Cell 7.1 What’s Inside the Cell? Prokaryotic Cells Eukaryotic Cells –The Nucleus –Ribosomes –Rough Endoplasmic Reticulum –Golgi Apparatus –Smooth.

Microtubules

Page 63: Inside the Cell 7.1 What’s Inside the Cell? Prokaryotic Cells Eukaryotic Cells –The Nucleus –Ribosomes –Rough Endoplasmic Reticulum –Golgi Apparatus –Smooth.

Microtubules Act as“Railroad Tracks” for vessicles

Page 64: Inside the Cell 7.1 What’s Inside the Cell? Prokaryotic Cells Eukaryotic Cells –The Nucleus –Ribosomes –Rough Endoplasmic Reticulum –Golgi Apparatus –Smooth.
Page 65: Inside the Cell 7.1 What’s Inside the Cell? Prokaryotic Cells Eukaryotic Cells –The Nucleus –Ribosomes –Rough Endoplasmic Reticulum –Golgi Apparatus –Smooth.

A protein “motor”, kinesin, generates the motion

Page 66: Inside the Cell 7.1 What’s Inside the Cell? Prokaryotic Cells Eukaryotic Cells –The Nucleus –Ribosomes –Rough Endoplasmic Reticulum –Golgi Apparatus –Smooth.
Page 67: Inside the Cell 7.1 What’s Inside the Cell? Prokaryotic Cells Eukaryotic Cells –The Nucleus –Ribosomes –Rough Endoplasmic Reticulum –Golgi Apparatus –Smooth.

Cilia and Flagella: Moving the Entire Cell

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Dynein is a protein motor in the axoneme

Page 71: Inside the Cell 7.1 What’s Inside the Cell? Prokaryotic Cells Eukaryotic Cells –The Nucleus –Ribosomes –Rough Endoplasmic Reticulum –Golgi Apparatus –Smooth.
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CHECK YOUR UNDERSTANDINGEach component of the cytoskeleton has a unique structure and set of functions. In addition to providing structural support, actin filaments and microtubules work in conjunction with motor proteins to move the cell or materials inside the cell. Intermediate filaments provide structural support. Most elements of the cytoskeleton are dynamic—they grow and shrink over time. You should be able to predict what will happen when experimental cells are treated with drugs that inhibit formation of each type of cytoskeletal filament.