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Bringing Individualised Neoantigen- based Cancer Vaccines into the Clinic; Challenges, Learnings & Victories European NeoAg Summit Amsterdam, April 25, 2019 Agnete B Fredriksen President & CSO Vaccibody AS [email protected]
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Bringing Individualised Neoantigen- based Cancer Vaccines ......Pep 1 Pep 2 Pep 3 Pep 4 Pep 5 Pep 6 Pep 7 Pep 8 Pep 9 Pep10 • Castle et al., 2012 and Kreiter et al., 2015 • Aurisicchio

Jul 09, 2020

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Page 1: Bringing Individualised Neoantigen- based Cancer Vaccines ......Pep 1 Pep 2 Pep 3 Pep 4 Pep 5 Pep 6 Pep 7 Pep 8 Pep 9 Pep10 • Castle et al., 2012 and Kreiter et al., 2015 • Aurisicchio

Bringing Individualised Neoantigen-based Cancer Vaccines into the Clinic; Challenges, Learnings & Victories

European NeoAg SummitAmsterdam, April 25, 2019Agnete B FredriksenPresident & CSOVaccibody AS

[email protected]

Page 2: Bringing Individualised Neoantigen- based Cancer Vaccines ......Pep 1 Pep 2 Pep 3 Pep 4 Pep 5 Pep 6 Pep 7 Pep 8 Pep 9 Pep10 • Castle et al., 2012 and Kreiter et al., 2015 • Aurisicchio

Vaccibody Product Pipeline

PROGRAM DISCOVERY PRE-CLINICAL PHASE I PHASE II PHASE III

MELANOMALUNG (NSCLC)BLADDERRENALHEAD AND NECK

VB10.16

VB10.NEO

VB10.NEO + NKTR-214HEAD AND NECK

PRECANCEROUS CERVICAL LESIONS

VB10.16 + Atezolizumab (CPI)*CERVICAL

Page 3: Bringing Individualised Neoantigen- based Cancer Vaccines ......Pep 1 Pep 2 Pep 3 Pep 4 Pep 5 Pep 6 Pep 7 Pep 8 Pep 9 Pep10 • Castle et al., 2012 and Kreiter et al., 2015 • Aurisicchio

Vaccibody – Proprietary Vaccine Technology Platform

Antigen moiety

Target to Antigen Presenting Cell

Dimerization for crosslinking target

receptor

Vaccibody DNA Vaccine Plasmid

VB10.NEO

Vaccibody in Protein Format

Exchangeable DNA Cassette

n=x

In vivo expression

The Vaccibody Technology Platform was developed based on the concept of targeting antigen to APC in order to create more efficacious vaccines.

Page 4: Bringing Individualised Neoantigen- based Cancer Vaccines ......Pep 1 Pep 2 Pep 3 Pep 4 Pep 5 Pep 6 Pep 7 Pep 8 Pep 9 Pep10 • Castle et al., 2012 and Kreiter et al., 2015 • Aurisicchio

DeltoidMuscle

Mechanism of action: Intrinsic adjuvant for direct targeting

Administration (i.m.) of DNA

plasmid

In vivo protein expression and

secretion

Attract – Deliver – Cross-presentSkewing the immune system to a CD8+ killer T-Cell response

Direct targeting & attraction of antigen presenting cells, high local vaccine concentration

Enhanced T cell immunity obtained with fewer and lower doses

Faster and longer lasting immune responses

Stronger potential to kill cancer cells

Tumour

The Vaccibody uses the muscle cell as a factory

Targeting is elicited by the MIP-1α chemokine

Page 5: Bringing Individualised Neoantigen- based Cancer Vaccines ......Pep 1 Pep 2 Pep 3 Pep 4 Pep 5 Pep 6 Pep 7 Pep 8 Pep 9 Pep10 • Castle et al., 2012 and Kreiter et al., 2015 • Aurisicchio

VB10.NEO – A Robust Vaccine Format

VB10.NEO-XX

>90 different VB10.NEO constructs with >450 neoepitopes constructed to date with up to 40 neoepitopes

VB10.NEO-XDVB10.NEO-X

Page 6: Bringing Individualised Neoantigen- based Cancer Vaccines ......Pep 1 Pep 2 Pep 3 Pep 4 Pep 5 Pep 6 Pep 7 Pep 8 Pep 9 Pep10 • Castle et al., 2012 and Kreiter et al., 2015 • Aurisicchio

Patient Friendly, simple Vaccine Delivery

Small, handy, easy to use

Minimal pain compared to electroporation

Cost effective

Applicable for multiple immunizations

Needle free injection

High patient compliance

Page 7: Bringing Individualised Neoantigen- based Cancer Vaccines ......Pep 1 Pep 2 Pep 3 Pep 4 Pep 5 Pep 6 Pep 7 Pep 8 Pep 9 Pep10 • Castle et al., 2012 and Kreiter et al., 2015 • Aurisicchio

Naked DNA plasmid as IMP

Proven Safety

Simple, Rapid and

Generalized process

Simple Formulation Versatile Easy i.m.

DeliveryEffective

Homologous Boost

CD8 prone

DNA plasmid is an ideal platfrom for bringing individualized neoantigen vaccines to the market as a viableproduct at reasonable COGS

Page 8: Bringing Individualised Neoantigen- based Cancer Vaccines ......Pep 1 Pep 2 Pep 3 Pep 4 Pep 5 Pep 6 Pep 7 Pep 8 Pep 9 Pep10 • Castle et al., 2012 and Kreiter et al., 2015 • Aurisicchio

• VB10.NEO induces a broader and stronger

response than Peptide + Poly (I:C) Adjuvant

vaccines after a single immunization.

• VB10.NEO vaccinated animals respond to all

10 neoepitopes after a single immunization.

• Immunodominant neoepitopes differ between

delivery vehiclesV B 1 0 .N

E O B

1 6 -X, 2

0 µ g

P e p t ide m

ix +

ad j,

2 0 µ g tota

l

P e p t ide m

ix+ a d j,

2 0 0 µ g tota

l

E mp ty

ve c to

r0

2 0 0

4 0 0

6 0 0

8 0 0

1 0 0 0

IFN

- γ s

po

ts/1

06

sp

len

oc

yte

s

P e p M 1

P e p M 2

P e p M 3

P e p M 4

P e p M 5

P e p M 6

P e p M 7

P e p M 8

P e p M 9

P e p M 1 0

VB10.NEO induces Rapid, Broad and Strong responses to multiple Neoepitopes by single Vaccination

Page 9: Bringing Individualised Neoantigen- based Cancer Vaccines ......Pep 1 Pep 2 Pep 3 Pep 4 Pep 5 Pep 6 Pep 7 Pep 8 Pep 9 Pep10 • Castle et al., 2012 and Kreiter et al., 2015 • Aurisicchio

VB10.NEO generates a broader immune response profile dominated by CD8+ T cells than competing technologies

* Tested IFN-γ CD4 and CD8 T cell response against 10 identical neoepitopes from B16 melanoma

Pep 1 Pep 2 Pep 3 Pep 4 Pep 5 Pep 6 Pep 7 Pep 8 Pep 9 Pep10

• Castle et al., 2012 and Kreiter et al., 2015

• Aurisicchio et al., 2019

Peptide and RNA vaccines induces primarily CD4 T cell responses, while VB10.NEO induces strong, dominating CD8 responses to the identical neoepitope sequencesNon-targetd DNA vaccines induced a CD8 response towards 2 of 6 testedneoepitopes

B16 melanoma modelPeptide* CD4

CD8

RNA* CD4CD8

Non-targetedDNA

CD4 nt nt nt ntCD8

VB10.NEO CD4CD8

Page 10: Bringing Individualised Neoantigen- based Cancer Vaccines ......Pep 1 Pep 2 Pep 3 Pep 4 Pep 5 Pep 6 Pep 7 Pep 8 Pep 9 Pep10 • Castle et al., 2012 and Kreiter et al., 2015 • Aurisicchio

VB10.NEO leads to a unique CD8 dominated neoepitope response

0

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M1 M2 M3 M4 M5 M6 M7 M8 M9 M10

VB10.NEO

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M1 M2 M3 M4 M5 M6 M7 M8 M9 M10

Peptide + poly I:C

• Castle et al., 2012 and Kreiter et al., 2015-adapted figure based on B16 melanoma results

VB10.NEO induces a strong, broad immune responsedominated by CD8+ T cells

Peptide + poly I:C vaccination has been reported to induce dominantly CD4 T cell responses

VB10.NEO induces strong, dominantly CD8+ T cell response to identical neoepitopesthat induces no or weak immune response if delivered as peptide vaccine

2x20µg 2x100µg

Page 11: Bringing Individualised Neoantigen- based Cancer Vaccines ......Pep 1 Pep 2 Pep 3 Pep 4 Pep 5 Pep 6 Pep 7 Pep 8 Pep 9 Pep10 • Castle et al., 2012 and Kreiter et al., 2015 • Aurisicchio

Confirmation of VB10.NEO’s unique ability to induce strongneoepitope-specific CD8 responses

MC38 colon carcinoma

VB10.NEO Peptide + poly I:C + anti-CD40 mAb

-VB10.NEO induces a strong CD8 T cell response, combined with a CD4 response to 5 of 6 MC38 neoantigens.-3 of these neoepitopes have been shown to be non-immunogenic delivered as peptide + adjuvant-Confirmation of VB10.NEO’s ability to induce stronger CD8 responses to neoantigens

Yadav et al., 2014

Rep s

Aa tf

Ad p g k

Irgq

Cp n e 1

Dp a g t1

0

5 0 0

1 0 0 0

1 5 0 0

2 0 0 0

2 5 0 0

IFN

-γ s

po

ts/1

06 c

ell

s

C D 8 re s p o n s e s

C D 4 re s p o n s e s

Page 12: Bringing Individualised Neoantigen- based Cancer Vaccines ......Pep 1 Pep 2 Pep 3 Pep 4 Pep 5 Pep 6 Pep 7 Pep 8 Pep 9 Pep10 • Castle et al., 2012 and Kreiter et al., 2015 • Aurisicchio

Vaccibody Induces Tumor Protection as Monotherapy

0 5 1 0 1 5 2 0 2 5 3 0 3 5 4 0 4 5 5 00

5 0

1 0 0

D a y s p o s t tu m o r in je c tio n

Tu

mo

r-fr

ee

mic

e (

%)

V B 1 0 .N E O C T 2 6 -X X v

V B 1 0 .N E O C T 2 6 -X X

P B S

p = 0 .0 0 2

Vaccibody vaccination induces strong CD8+ T cell responses and tumor protection as Monotherapy

Combination with anti-PD-1 immunotherapy induced enhanced anti-tumour responses in mice involving complete tumour regression of large, established tumours

Long-term memory responses ensure effective anti-tumour responses after a 2nd tumour challenge in surviving mice with no sign of tumour growth

Control

Vaccibody

PBS

0 7 1 4 2 1 2 8 3 5 4 2 4 9 5 6

0

5

1 0

1 5

2 0

2 5

V a c c ib o d y a n d C P I

D a y s p o s t tu m o r in je c tio n

Tu

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mm

)

Vaccibody Combination Therapy

0 7 1 4 2 1 2 8 3 5 4 2 4 9 5 6

0

5

1 0

1 5

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2 5

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Vaccibody Monotherapy

40% tumour free

70% tumour free

N=10 N=10N=10

Re-challenged mice are protectedCT26 coloncarcinomamodel

Page 13: Bringing Individualised Neoantigen- based Cancer Vaccines ......Pep 1 Pep 2 Pep 3 Pep 4 Pep 5 Pep 6 Pep 7 Pep 8 Pep 9 Pep10 • Castle et al., 2012 and Kreiter et al., 2015 • Aurisicchio

Neoepitope-specific CD8 T cells are crucial for tumour protection

Depletion of CD8 T cells prohibit tumour protection in VB10.NEO vaccinated mice, indicatinga crucial role of neoepitope-specific CD8 T cells for anti-tumour efficacy

0 1 0 2 0 3 0 4 00 .0

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2 .0

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olu

me

(cm

3)

P B S

V B 1 0 .N E O

V B 1 0 .N E O + a n t i-C D 4

V B 1 0 .N E O + a n t i-C D 8

Individual growth curvesAverage, all groups

0 7 1 4 2 1 2 8 3 5 4 2 4 9 5 60

5

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1 5

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0 7 1 4 2 1 2 8 3 5 4 2 4 90

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0 7 1 4 2 1 2 8 3 5 4 2 4 90

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VB10.NEO+ anti-CD8VB10.NEO VB10.NEO + anti-CD4

Page 14: Bringing Individualised Neoantigen- based Cancer Vaccines ......Pep 1 Pep 2 Pep 3 Pep 4 Pep 5 Pep 6 Pep 7 Pep 8 Pep 9 Pep10 • Castle et al., 2012 and Kreiter et al., 2015 • Aurisicchio

Ranking VB10.NEO synthesis

In vivo mouse experiments

IFNγ ELISpot (CD8/CD4)> 300 neoepitopes

Anti-tumour efficacy

Neoepitope predictionmodel Trained on in vivo

data

Neoepitopecalling

Data to train algorithm

Core tissueexpression Proteome

Developing VB10.NEO specific Neoepitope Selection

Clinical data VB N-01

Data to train algorithm

Page 15: Bringing Individualised Neoantigen- based Cancer Vaccines ......Pep 1 Pep 2 Pep 3 Pep 4 Pep 5 Pep 6 Pep 7 Pep 8 Pep 9 Pep10 • Castle et al., 2012 and Kreiter et al., 2015 • Aurisicchio

Successful development of a strong proprietary neoepitope selection method NeoSELECTTM

0%

10%

20%

30%

40%

50%

60%

Version 1 Version 2 Vaccibody's NeoSELECT

Immunogenic neoepitopes identified by different prediction methods during development

• Vaccibody has since 2017 successfully developed a proprietary neoepitope selection method able to identify a high number of immunogenic neoepitopes when used in VB10.NEO vaccines

• Majority of the induced responses are CD8 restricted (measured ex vivo) with latest version

• This method, NeoSELECT, is used in the VB N-01 clinical trial

Immunogenic neoepitopes

Strongly immunogenic neoepitopes

Page 16: Bringing Individualised Neoantigen- based Cancer Vaccines ......Pep 1 Pep 2 Pep 3 Pep 4 Pep 5 Pep 6 Pep 7 Pep 8 Pep 9 Pep10 • Castle et al., 2012 and Kreiter et al., 2015 • Aurisicchio

Clinical Trial VB N-01

VB N-01: An open labelled first human dose phase 1/2a study to evaluate safety, feasibility and efficacy of multiple dosing with individualised VB10.NEO immunotherapy in patients with locally advanced or metastatic melanoma, NSCLC, clear renal cell carcinoma, urothelial cancer or squamous cell carcinoma of head and neck, who did not reach complete responses with current standard of care immune checkpoint blockade

VB10.NEO

Melanoma

NSCLC

Clear Renal Cell Carcinoma

Urothelial Cancer

Squamous Cell Carcinomaof the Head and Neck

• Approved CPI as SOC• Moderate to high mutational load

VB N-01

n=40-91

Page 17: Bringing Individualised Neoantigen- based Cancer Vaccines ......Pep 1 Pep 2 Pep 3 Pep 4 Pep 5 Pep 6 Pep 7 Pep 8 Pep 9 Pep10 • Castle et al., 2012 and Kreiter et al., 2015 • Aurisicchio

Study Design and Treatment Schedule VB N-01

6 weeks

12 months

Sequencing, Synthesis &

Manufacturing

VaccinationPrime

VaccinationMaintenance Follow Up

24 months

0 3 6

1 2 3

10 14 18 22 26 30 34 38 42 46 50

4 5 6 7 8 9 10 11 12 13 14

Consent +

Biopsy

Week

Dose #

CPI treatment>12 weeks

Page 18: Bringing Individualised Neoantigen- based Cancer Vaccines ......Pep 1 Pep 2 Pep 3 Pep 4 Pep 5 Pep 6 Pep 7 Pep 8 Pep 9 Pep10 • Castle et al., 2012 and Kreiter et al., 2015 • Aurisicchio

One year into the VB N-01 clinical study

• Biopsies• Multiple providers in manufacturing chainChallenges

• Quality of neoepitopes versus predicted immunogenicity• Implication of different indications• Inclusion criteria >12 weeks on CPI

Learnings

• 100% success in manufacturing VB10.NEO for all patients withpositive biopsy

• 100% successful with top 20 neoepitope choice• DNA vaccine manufacturing proven to be ideal for PCV

Successes

Page 19: Bringing Individualised Neoantigen- based Cancer Vaccines ......Pep 1 Pep 2 Pep 3 Pep 4 Pep 5 Pep 6 Pep 7 Pep 8 Pep 9 Pep10 • Castle et al., 2012 and Kreiter et al., 2015 • Aurisicchio

Strength of the neoepitope-specific T cell response is importantfor anti-tumour efficacy

Individual tumour-bearing mice vaccinated with the same VB10.NEO vaccine have different level of neoepitope-specific T cell response.

The neoantigen-specific T cell response tends to correlate with size of the tumour.

0 .0 0 .5 1 .0 1 .5 2 .01 2 8

2 5 6

5 1 2

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T u m o u r v o lu m e (c m 3 )

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Page 20: Bringing Individualised Neoantigen- based Cancer Vaccines ......Pep 1 Pep 2 Pep 3 Pep 4 Pep 5 Pep 6 Pep 7 Pep 8 Pep 9 Pep10 • Castle et al., 2012 and Kreiter et al., 2015 • Aurisicchio

Bempegaldesleukin (NKTR-214) has the potential to significantly expand T cells

Page 21: Bringing Individualised Neoantigen- based Cancer Vaccines ......Pep 1 Pep 2 Pep 3 Pep 4 Pep 5 Pep 6 Pep 7 Pep 8 Pep 9 Pep10 • Castle et al., 2012 and Kreiter et al., 2015 • Aurisicchio

Combination of VB10.NEO and NKTR-214 greatly synergizes

Total T cell response per spleen

VB 1 0 .N E O C T 2 6 -X X

VB 1 0 .N E O C T 2 6 -X X

+ N K T R -2 1 4

0

1×1 0 5

2×1 0 5

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ple

en

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M 002

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M 114

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M 125

C o n trol

V B 1 0 .NE O

N K T R -21 4

V B 1 0 .NE O

+N K T R -21 4

0

5 .0×1 0 4

1 .0×1 0 5

1 .5×1 0 5

2 .0×1 0 5

C ) T o ta l C D 8 + T c e ll re s p o n s e s /s p le e nin C T 2 6 tu m o r m o d e l

IFN

- γ s

po

ts/s

ple

en

M 001

M 002

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M 008

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M 125

C o n trol

V B 1 0 .NE O

N K T R -21 4

V B 1 0 .NE O

+ NK T R -2

1 4

0

5 .0×1 0 4

1 .0×1 0 5

1 .5×1 0 5

2 .0×1 0 5

D ) T o ta l C D 4 + T c e ll re s p o n s e s /s p le e nin C T 2 6 tu m o r m o d e l

IFN

- γ s

po

ts/s

ple

en

M 001

M 002

M 007

M 008

M 010

M 030

M 065

M 069

M 075

M 086

M 088

M 092

M 103

M 104

M 106

M 108

M 112

M 114

M 115

M 125

CD8 responses CD4 responses

• Combination of VB10.NEO and bempegaldesleukin (NKTR-214) synergizes to elicit greater breadthand depth of neoantigen-specific T cell responses than each individual treatment

• The synergistic effect was observed in both CD4 and CD8 cells. Most pronounced on CD8 T cellresponses.

Page 22: Bringing Individualised Neoantigen- based Cancer Vaccines ......Pep 1 Pep 2 Pep 3 Pep 4 Pep 5 Pep 6 Pep 7 Pep 8 Pep 9 Pep10 • Castle et al., 2012 and Kreiter et al., 2015 • Aurisicchio

Striking immediate improvement of anti-tumour efficacy when adddingbempegaldesleukin (NKTR-214) to VB10.NEO and anti-PD-1 treatment

5 1 0 1 5 2 0 2 5

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C o n tro l

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V B 1 0 .N E O +N K T R -2 1 4 + a n ti-P D -1

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Adding NKTR-214 (from day 18) to a VB10.NEO and anti-PD-1 treatment induce rapid, complete and durable tumour regression of small tumours and long-lasting stabilizationof large tumours.

Page 23: Bringing Individualised Neoantigen- based Cancer Vaccines ......Pep 1 Pep 2 Pep 3 Pep 4 Pep 5 Pep 6 Pep 7 Pep 8 Pep 9 Pep10 • Castle et al., 2012 and Kreiter et al., 2015 • Aurisicchio

Plan to expand the VB N-01 clinical trial in 2019

Adding an arm to treat >10 SCCHN patients with NKTR-214 plus VB10.NEO and anti-PD-(L)1

In addition, first expansion cohort(s) may be initiated in H2, 2019

Page 24: Bringing Individualised Neoantigen- based Cancer Vaccines ......Pep 1 Pep 2 Pep 3 Pep 4 Pep 5 Pep 6 Pep 7 Pep 8 Pep 9 Pep10 • Castle et al., 2012 and Kreiter et al., 2015 • Aurisicchio

Vaccibody’s Solution to Personalised Cancer Treatment

Vaccibody provide a Rapid, Cost-effectiveand Efficacious solution

NeoSELECTTM

-Needle-free

-Target, Attract, Mature, Deliver, Cross-present

-Rapid, strong, long-lasting

-CD8 dominated

-DNA: Robust, rapid, cost-effective, stable, safe

-up to 40 neoepitopes

Page 25: Bringing Individualised Neoantigen- based Cancer Vaccines ......Pep 1 Pep 2 Pep 3 Pep 4 Pep 5 Pep 6 Pep 7 Pep 8 Pep 9 Pep10 • Castle et al., 2012 and Kreiter et al., 2015 • Aurisicchio

Vaccibody Dreamteam!

Confidential 25

Page 26: Bringing Individualised Neoantigen- based Cancer Vaccines ......Pep 1 Pep 2 Pep 3 Pep 4 Pep 5 Pep 6 Pep 7 Pep 8 Pep 9 Pep10 • Castle et al., 2012 and Kreiter et al., 2015 • Aurisicchio

www.vaccibody.com