The Southern Annular Mode (SAM) influences phytoplankton … · 2020. 7. 24. · 1.1 Importance of the SIZ phytoplankton bloom The Antarctic SIZ is one of the most productive parts

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Biogeosciences 17 3815ndash3835 2020httpsdoiorg105194bg-17-3815-2020copy Author(s) 2020 This work is distributed underthe Creative Commons Attribution 40 License

The Southern Annular Mode (SAM) influences phytoplanktoncommunities in the seasonal ice zone of the Southern OceanBruce L Greaves1 Andrew T Davidson23 Alexander D Fraser31 John P McKinlay2 Andrew Martin1Andrew McMinn1 and Simon W Wright123

1Institute for Marine and Antarctic Studies University of TasmaniaPrivate Bag 129 Hobart Tasmania 7001 Australia2Australian Antarctic Division Department of the Environment and Energy203 Channel Highway Kingston Tasmania 7050 Australia3Antarctic Climate amp Ecosystems Cooperative Research Centre (ACE CRC) University of TasmaniaPrivate Bag 80 Hobart Tasmania 7001 Australia

Correspondence Bruce L Greaves (bruceonariagmailcom)

Received 3 October 2019 ndash Discussion started 21 October 2019Revised 18 May 2020 ndash Accepted 27 May 2020 ndash Published 23 July 2020

Abstract Ozone depletion and climate change are causingthe Southern Annular Mode (SAM) to become increasinglypositive driving stronger winds southward in the SouthernOcean (SO) with likely effects on phytoplankton habitatdue to possible changes in ocean mixing nutrient upwellingand sea ice characteristics This study examined the effectof the SAM and 12 other environmental variables on theabundance of siliceous and calcareous phytoplankton in theseasonal ice zone (SIZ) of the SO A total of 52 surface-water samples were collected during repeat resupply voyagesbetween Hobart Australia and Dumont drsquoUrville Antarc-tica centred around longitude 142 E over 11 consecutiveaustral springndashsummer seasons (2002ndash2012) and spanning131 d in the springndashsummer from 20 October to 28 FebruaryA total of 22 taxa groups comprised of individual speciesgroups of species genera or higher taxonomic groups wereanalysed using CAP analysis (constrained analysis of prin-cipal coordinates) cluster analysis and correlation Overallsatellite-derived estimates of total chlorophyll and measureddepletion of macronutrients both indicated a more positiveSAM was associated with greater productivity in the SIZThe greatest effect of the SAM on phytoplankton commu-nities was the average value of the SAM across 57 d in theprevious austral autumn centred around 11 March which ex-plained 133 of the variance in community compositionin the following springndashsummer This autumn SAM indexwas significantly correlated pair-wise (p lt 005) with the

relative abundance of 12 of the 22 taxa groups resolved Amore positive SAM favoured increases in the relative abun-dance of large Chaetoceros spp that predominated later inthe springndashsummer and reductions in small diatom taxa andsiliceous and calcareous flagellates that predominated earlierin the springndashsummer Individual species belonging to theabundant Fragilariopsis genera responded differently to theSAM indicating the importance of species-level observationin detecting SAM-induced changes in phytoplankton com-munities The day through the springndashsummer on which asample was collected explained a significant and larger pro-portion (154 ) of the variance in the phytoplankton com-munity composition than the SAM yet this covariate was aproxy for such environmental factors as ice cover and sea sur-face temperature factors that are regarded as drivers of theextreme seasonal variability in phytoplankton communitiesin Antarctic waters The impacts of SAM on phytoplanktonwhich are the pasture of the SO and principal energy sourcefor Antarctic life would have ramifications for both carbonexport and food availability for higher trophic levels in theSIZ of the SO

Published by Copernicus Publications on behalf of the European Geosciences Union

3816 B L Greaves et al SAM influences phytoplankton in SIZ

1 Introduction

Phytoplankton are the primary producers that feed almost alllife in the oceans In the Southern Ocean (SO) defined asthe southern portions of the Atlantic Ocean Indian Oceanand Pacific Ocean south of 60 S (Arndt et al 2013) springndashsummer phytoplankton blooms in the seasonal ice zone (SIZ)feed swarms of krill which in turn are key food for sea-birds fish whales and almost all Antarctic life (Smetacek2008 Cavicchioli et al 2019) Phytoplankton also play acritical role in ameliorating global climate change by captur-ing carbon through photosynthesis Around one-third of thecarbon fixed by phytoplankton in SIZ of the SO sinks out ofthe surface ocean (Henson et al 2015) more than the globalocean average of around 20 (Boyd and Trull 2007 Ciais etal 2013 Henson et al 2015) With total productivity withinthe SIZ of the SO estimated at 68ndash107 Tg C yrminus1 (Arrigo etal 2008) this equates to 23ndash36 Tg C yrminus1 around 02 ndash03 of the estimated annual global marine biota export of13 Pg (Ciais et al 2013) being sequestered to the deeperocean for climatically significant periods of time likely hun-dreds to thousands of years (Lampitt and Antia 1997) Evenso the SIZ of the SO shows a net release of CO2 fromthe ocean to the atmosphere due to off-gassing of carbon-rich deep-ocean water upwelling at the Antarctic Divergence(Takahashi et al 2009) Thus any changes in the composi-tion and abundance of phytoplankton in the SIZ are likely toinfluence both the trophodynamics of the SO and the contri-bution of the region to oceanicndashatmospheric carbon flux

Global standing stocks of phytoplankton are estimated tohave been declining by as much as 1 per year a declinelargely attributed to rising surface ocean temperature (Boyceet al 2010 2011 Mackas 2011) Furthermore global phy-toplankton productivity is predicted to drop by as much as9 from the years 1990 to 2090 (RCP85 ldquobusiness asusualrdquo) with a decline across most of the Earthrsquos ocean area(Bopp et al 2013) In contrast higher latitudes includingthe SIZ of the SO are predicted to experience an increasein phytoplankton productivity due to changes to seasonal iceextent and duration (Parkinson 2019 Turner et al 2013)andor increased upwelling of nutrient-rich deep ocean waterat the Antarctic Divergence (Steinacher et al 2010 Bopp etal 2013 Carranza and Gille 2015)

11 Importance of the SIZ phytoplankton bloom

The Antarctic SIZ is one of the most productive parts of theSO (Carranza and Gille 2015) It is also a significant com-ponent of the global carbon cycle by virtue of both carbonsequestration by phytoplankton (Henson et al 2015) as wellas upwelling and off-gassing of carbon-rich deep ocean wa-ter (Takahashi et al 2009) It is one of the largest and mostvariable biomes on Earth with sea ice extent varying fromaround 20 million km2 during winter to only 4 million km2

in summer (Turner et al 2015 Massom and Stammerjohn

2010 Parkinson 2019) The most macronutrient-rich surfacewaters of the SIZ occur over the Antarctic Divergence a cir-cumpolar region of the SO located at around 63 S wherecarbon- and nutrient-rich water upwells to the surface sup-plying the nutrients that drive much of the phytoplanktonproduction in the SO (Lovenduski and Gruber 2005 Car-ranza and Gille 2015)

In winter phytoplankton growth is limited by light avail-ability and temperature In spring and summer phytoplank-ton can proliferate in the high-light high-nutrient waters thattrail the southward retreat of sea ice (Fig 1a b) (Wilson etal 1986 Smetacek and Nicol 2005 Lannuzel et al 2007Saenz and Arrigo 2014 Rigual-Hernaacutendez et al 2015)The SIZ supports high phytoplankton standing stocks andproductivity and phytoplankton abundance in blooms candouble every few days (Wilson et al 1986 Sarthou et al2005) Wind speed is a primary determinant of phytoplank-ton bloom development in the SIZ with calmer conditionsfostering shallow mixed depths that maintain phytoplanktoncells in a high-light environment and maximise productivity(Savidge et al 1996 Fitch and Moore 2007) Phytoplank-ton populations are characterised by large-scale spatial andtemporal variability (Martin et al 2012) with only 17 ndash24 of ice edge waters experiencing phytoplankton bloomsin any springndashsummer period (Fitch and Moore 2007)

12 The Southern Annular Mode

The Southern Annular Mode (SAM) which is also variouslyalso called the High-Latitude Mode and the Antarctic Oscil-lation is well-represented by two alternative definitions (a)the normalised zonal mean sea-level pressure at 40 S mi-nus that at 65 S (Gong and Wang 1999 Marshall 2003)or (b) the principal mode of atmospheric circulation at highlatitudes of the Southern Hemisphere The SAM reflects theposition and intensity of a zonally symmetric structure of at-mospheric circulation in the Southern Hemisphere circlingthe Earth (annular) at around 50 S and it has been defined asthe alternating pattern of strengthening and weakening west-erly winds in conjunction with high- to low-pressure bands(Ho et al 2012) Variation in the SAM typically describesaround 35 of total Southern Hemisphere climate variabil-ity (Marshall 2007) and the SAM is currently the dominantlarge-scale mode through which climate change is expressedat SO latitudes (Thompson and Solomon 2002 Lenton andMatear 2007 Lovenduski et al 2007 Swart et al 2015)Between 1979 and 2017 the value of daily SAM averaged004 index points ranged fromminus513 to 464 and had a stan-dard deviation of 138 (after data by NOAA 2017) Averagemonthly SAM varied from minus27 to 25 index points over the11 years studied (Fig 1c)

There was a trend toward more positive SAM from 1979to 2017 of 0011 index points per year (NOAA 2017) at-tributed to both ozone depletion (Thompson and Solomon2002 Arblaster and Meehl 2006 Gillett and Fyfe 2013

Biogeosciences 17 3815ndash3835 2020 httpsdoiorg105194bg-17-3815-2020

B L Greaves et al SAM influences phytoplankton in SIZ 3817

Jones et al 2016) and increasing atmospheric greenhousegas concentrations (Thompson et al 2011) The long-termaverage SAM is now at its most positive level for at least thepast 1000 years (Abram et al 2014) Continuing increases inatmospheric greenhouse gases are expected to drive a furtherpositive increase in the SAM in all seasons (Arblaster andMeehl 2006 Swart and Fyfe 2012 Gillett and Fyfe 2013)despite the expected recovery in stratospheric ozone concen-trations to pre-ozone hole values by around 2065 (Son et al2009 Schiermeier 2009 Thompson et al 2011 Solomon etal 2016)

A more positive SAM indicates the occurrence of astrengthening circumpolar vortex (Marshall 2003 Ho etal 2012) leading to stronger westerly winds and increasedstorminess at high latitudes (Hall and Visbeck 2002 Kwokand Comiso 2002 Lovenduski and Gruber 2005 Arblasterand Meehl 2006) These changes are particularly markedsouth of 60 S in the atmospheric Southern CircumpolarTrough (Hines et al 2000 Mackintosh et al 2017) a re-gion characterised by strong winds with variable direction(Taljaard 1967) Stronger winds associated with more pos-itive SAM may result in increased transport of surface wa-ter northward from the Antarctic Divergence by Ekman drift(Lovenduski and Gruber 2005 DiFiore et al 2006) poten-tially driving increased upwelling of nutrient- and carbon-rich deep ocean water at the Antarctic Divergence (Hall andVisbeck 2002) More positive SAM is also associated withreduced near-surface air temperature over the SIZ due to anincreased frequency of strong southerly winds and increasedcloud cover (Lefebvre et al 2004 Sen Gupta and England2006 Marshall 2007) Sea ice extent around the Antarcticcontinent shows zonal relationships with the SAM with pos-itive relationships between the SAM and sea ice extent inthe western Pacific and Indian sectors of the SO and nega-tive or non-existent relationships in other sectors (Kohyamaand Hartmann 2016) Wind also affects the nature of the seaice breaking up floes via wave interactions increasing flood-ing and changing pack ice density (compressing or openingup the pack) and contributing to ice formation by generatingfrazil ice (Massom and Stammerjohn 2010 Squire 2020)Lower sea-surface temperatures have been observed to lagpositive SAM events by 1 to 4 months (Lefebvre et al 2004Meredith et al 2008) and changes in the SAM may takeweeks to months to be manifested in phytoplankton commu-nities (Sen Gupta and England 2006 Meredith et al 2008)Extreme SAM events might also impact phytoplankton com-munities for multiple years (Ottersen et al 2001)

By modulating upwelling ocean mixed depth air temper-ature and sea ice characteristics and duration it is likely thata more positive SAM will affect the composition and abun-dance of phytoplankton in the SIZ of the SO Lovenduski andGruber (2005) predicted that more positive SAM would sup-port higher phytoplankton productivity and subsequent anal-yses by Arrigo et al (2008) Boyce et al (2010) and Soppaet al (2016) have confirmed a positive relationship between

the SAM and phytoplankton standing stocks and productivitysouth of 60 S in the SIZ

13 The hypothesis

Based on the predicted and observed positive relationshipsbetween the SAM and phytoplankton standing stocks andproductivity in the SIZ of the SO we hypothesised thatchanges in the SAM could also elicit changes in the compo-sition of the phytoplankton community To test this hypothe-sis we conducted a scanning electron microscopic survey ofhard-shelled phytoplankton in surface waters of the AntarcticSIZ using samples collected between October and Februaryeach springndashsummer over 11 consecutive years (2002ndash2003to 2012ndash2013) We then related the composition of thesecommunities to environmental variables including the SAM

2 Methods

A total of 52 surface-water samples were collected from theseasonal ice zone (SIZ) of the Southern Ocean (SO) across11 consecutive austral springndashsummers from 2002ndash2003 to2012ndash2013 The samples were collected aboard the Frenchre-supply vessel MV LrsquoAstrolabe during resupply voyagesbetween Hobart Australia and Dumont drsquoUrville Antarc-tica between 20 October and 28 February Most sampleswere collected from ice-free water although some were col-lected south of the receding ice edge (Fig 1a)

The sampled area was in the Indian sector of the SO span-ning 270 km of latitude between 62 and 645 S and 625 kmof longitude between 136 and 148 E (Fig 2 inset) The arealies gt 100 km north of the Antarctic continental shelf breakin waters gt 3000 m depth

Samples were obtained from the clean seawater line ofthe re-supply vessel from around 3 m depth Each samplerepresented 250 mL of seawater filtered through a 25 mmdiameter polycarbonate-membrane filter with 08 microm pores(Poretics) The filter was then rinsed with two additions ofapproximately 2 mL of Milli-Q water to remove salt thenair dried and stored in a sealed container containing sil-ica gel desiccant Samples were prepared for scanning elec-tron microscope (SEM) survey by mounting each filter ontoa metal stub and sputter coating with 15 nm gold or plat-inum Only organisms possessing hard siliceous or calcare-ous shells were sufficiently well preserved through the sam-ple preparation technique that they could be identified bySEM and these included diatoms coccolithophores sili-coflagellates Pterosperma Parmales radiolarians and ar-moured dinoflagellates

21 Phytoplankton relative abundance

The composition of the phytoplankton community of eachsample was determined from times400 magnification imagescaptured using a JEOL JSM 840 Field Emission SEM Cell

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3818 B L Greaves et al SAM influences phytoplankton in SIZ

Figure 1 (a) Latitude and timing of samples (black filled circles) and sea ice extent at 143 E (grey solid line) (b) monthly total chlorophyll(Acker and Leptoukh 2007 GMAO 2017) across the sampled area (longitude 1357ndash1478 E) northern extent (latitude minus62 N lightgreen solid circles) and southern extent (latitudeminus645 N olive-green open circles) and (c) monthly average of daily SAM (NOAA 2017)

Figure 2 Example of phytoplankton identification on a single SEM image representing 00348 mL of seawater Overlying letters are taxacodes for individual phytoplankton taxa considered in the analysis (listed in Table 3) codes in parenthesis are rare taxa (see text) Insetsampling area in relation to southern Australia and the Antarctic coastline with sample locations indicated as open circles

Biogeosciences 17 3815ndash3835 2020 httpsdoiorg105194bg-17-3815-2020

B L Greaves et al SAM influences phytoplankton in SIZ 3819

numbers for each phytoplankton taxon were counted in arandom selection of captured images taken of each sam-ple Each captured image (Fig 2) represented an area of301 micromtimes 227 microm (area 0068 mm2) of each sample filterwhich was captured at a resolution of 85 pixels per microme-tre A minimum of three SEM images were assessed for eachsample with more images assessed when cell densities werelower ndash individual images were considered as incrementalincreases in the area of a sample covered and not samplingreplicates On average 387 cells were counted for each sam-ple Taxa were classified with the aid of Scott and Marchant(2005) Tomas (1997) and expert opinion Cell counts persample were converted to volume-specific abundances (cellsper mL) by dividing total counts by the number of imagesassessed multiplied by 00348 mL of seawater represented byeach captured image

A total of 48 phytoplankton taxa were identified many tospecies level Because the diatoms Fragilariopsis curta andF cylindrus could not be reliably discriminated at the micro-scope resolution employed they were pooled into a singletaxa group Other taxa were also grouped namely Nitzschiaacicularis with N decipiens to a single group and discoidcentric diatoms of the genera Thalassiosira Actinocyclusand Porosira to another Rare species with maximum rela-tive abundance lt 2 were removed from the data prior toanalysis as they were not considered to be sufficiently abun-dant to warrant further analysis (Webb and Bryson 1972Taylor and Sjunneskog 2002 Swiło et al 2016) After pool-ing taxa and deleting rare taxa 22 taxa and taxonomic-groups (species groups of species and families) remainedto describe the composition of the phytoplankton commu-nity A total of 19 499 phytoplankton organisms were identi-fied and counted 18 878 diatoms 322 Parmales 173 coccol-ithophores 81 silicoflagellates and 45 Petasaria

Phytoplankton abundance data were converted to relativeabundance by dividing each value by the total abundanceof the 22 taxa groups in the sample This was to alleviateany variation among samples resulting from dilution a phe-nomenon whereby the abundance of cells in surface waterscan be reduced in a matter of hours by an abrupt increase inwind speed and associated increase in the mixed layer depth(Carranza and Gille 2015) diluting near-surface cells into agreater water volume However relative abundance has thedisadvantage that blooming of one species will cause a re-duction in relative abundance of other present species whentheir absolute abundances may not have changed

22 Environmental covariates

Phytoplankton abundances were related to a range of envi-ronmental covariates available at the time of sampling Theseincluded the SAM sea surface temperature (SST) salinity(S) time since sea ice cover (DSSI defined below) mini-mum latitude of sea ice in the preceding winter latitude andlongitude of sample collection (LATS and LONGE respec-

tively) the days since 1st October that a sample was collected(D) the year of sampling (Y being the year that each springndashsummer sampling season began) the time of day that a sam-ple was collected and satellite-derived total chlorophyll con-tent Macronutrient concentrations phosphate (PO4) silicate(SiO4) and nitrate+ nitrite (hereafter nitrate NOx) were in-cluded as indicators of nutrient drawdown as a proxy for phy-toplankton productivity (Arrigo et al 1999)

We obtained daily estimates of the SAM from the USNWS Climate Prediction Center (NOAA 2017) This datasetuses the principal component method definition of the SAM(Mo 2000) rather than the simple zonal-mean normalisedpressure difference technique (Gong and Wang 1999) Weused these estimates principally because daily values werereadily available other available estimates were largely sea-sonal averages only (Ho et al 2012) Water samples for dis-solved macronutrients were collected frozen on the ship andlater analysed at the Commonwealth Scientific and IndustrialResearch Organisation in Hobart Australia using standardspectrophotometric methods (Hydes et al 2010) The vari-able DSSI was defined as the time since sea ice had meltedto 20 cover after Wright et al (2010) as determined fromdaily Special Sensor MicrowaveImager (SSMI) sea ice con-centration data distributed by the University of Hamburg(Spreen et al 2008) Total chlorophyll content was estimatedfor each sample location by estimating the total chlorophyllcontent over a 20 kmtimes 20 km area centred at each samplelocation for all available times from 31 August to 1 Mayin the year of sampling (monthly observations) (Acker andLeptoukh 2007 GMAO 2017) and interpolating betweenobservations to estimate total chlorophyll content on the datesampled (some examples are reproduced in Fig S3) By thismethod total chlorophyll was estimated for 49 of the 52 sam-ples the remainder of samples having a paucity of data whichprecluded estimation

23 Statistical analysis

Three statistical analyses were undertaken to explore the hy-pothesis (i) constrained analysis of principal coordinates(CAP Anderson and Willis 2003 also known as distance-based redundancy analysis Legendre and Anderson 1999)was used to estimate the influence of multiple environmentalcovariates in simultaneously explaining community compo-sition (ii) clustering techniques were used to explore similar-ities in phytoplankton community composition among sam-ples independently of environmental information to definesignificantly different groups of samples with similar phyto-plankton community composition and (iii) correlation anal-ysis was used to support observed relationships between phy-toplankton community composition and environmental co-variates

For CAP and cluster analysis relative abundance datawere square-root-transformed to reduce possible dominanceof the analysis by a few abundant taxa The BrayndashCurtis dis-

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3820 B L Greaves et al SAM influences phytoplankton in SIZ

Figure 3 Variance in phytoplankton community composition explained by the SAM versus timing and length of the averaged range ofdaily SAM values Response surfaces relate the fraction of total variance in phytoplankton community composition attributable to the SAMversus the number of days in the range of the averaged daily SAM (vertical axis) and the timing of the centre of the range of the averageddaily SAM (horizontal axis) The horizontal axis is expressed as (a) the time through the calendar year of the middle of the range and (b) thenumber of days before a sample was collected to the middle of the range Three obvious maxima are identified with crosses (SAMautumnSAMspring and SAMprior)

similarity index (Bray and Curtis 1957) was used to calcu-late the resemblance of samples based on their communitystructure The advantage of this index for the cell count datawas that similarity among samples was not strongly affectedby the absence of taxa

CAP was applied to the BrayndashCurtis resemblance matrixto partition total variance in community composition into un-constrained and constrained components with the latter rep-resenting the variation due to the environmental covariatesCAP is an example of a constrained ordination method inwhich the typical samplendashspecies matrix of abundances (asused in redundancy analysis) is replaced with a symmetricmatrix of pairwise sample similarities The advantage of thisdistance-based approach to redundancy analysis is that anyecologically relevant distance measure may be used herewe use the BrayndashCurtis metric because it discounts jointabsences between samples when determining similarity Aforward selection strategy was used to choose the optimummodel containing the minimum subset of constraints requiredto explain the most variation in phytoplankton communitystructure (Legendre et al 2011) Linear projections of sig-nificant covariates were plotted as arrows in the ordinationdiagram indicating the direction and magnitude of environ-mental gradients that were correlated with changes in thephytoplankton community (Davidson et al 2016) The vari-ance in phytoplankton community structure (as determinedfrom the ordination) explained by each environmental co-variate was calculated according to the procedure outlined inTer Braak and Verdonschot (1995) and attributed to Dargie(1984) Taxa were added to the CAP plots as weighted site

averages for each species thereby indicating the relative in-fluence of the fitted environmental constraints on each phy-toplankton taxa group

Hierarchical agglomerative clustering based on averagelinkage was performed on the BrayndashCurtis resemblance ma-trix Significant differences among sample clusters were de-termined according to the similarity profile (SIMPROF) per-mutation method of Clarke et al (2008) based on α = 005and 1000 permutations Clustering can identify the presenceof significant differences between the community composi-tion of the samples but clustering cannot identify an effect ofthe SAM at least not directly since environmental covariatesare not included in the cluster analysis

Pair-wise correlation analyses were performed using Pear-sonrsquos correlation coefficient r to explore the relationshipsamong environmental variables and between these environ-mental variables and the relative abundances of phytoplank-ton taxa (Rodgers and Nicewander 1988) Given the largenumber of pair-wise correlations considered we applied aBonferroni correction to give consideration to the family-wise error rate by setting alpha which is usually α = 005(Gibbons and Pratt 1975 Cohen 1990) to αm where mis the total number of correlations considered Recognisingthat αm may be conservative (Nakagawa 2004) we indi-cated when calculated correlations were significant at bothα lt 005 and at Bonferroni-corrected α lt 005m

Response surfaces were used to display the variance ex-plained from individual CAP analyses according to the num-ber of days averaged and the mid-point (or lagged mid-point) of the range of days averaged for each aggregated

Biogeosciences 17 3815ndash3835 2020 httpsdoiorg105194bg-17-3815-2020

B L Greaves et al SAM influences phytoplankton in SIZ 3821

Table 1 Variance in the community composition of 22 phytoplankton taxa groups attributable to constraining environmental covariables inthe CAP analysis

CAP analysis Variance Covariate Variance Fraction p

category of totalvariance

D 061 154 lt 0001SST 057 146 lt 0001SAMautumn 052 133 lt 0001LONGE 047 119 lt 0001

(a) Variables fit individually as SAMspring 041 103 lt 0001the only constraining covariate SAMprior 039 99 lt 0001

DSSI 023 59 0004S 018 47 0018Y 013 34 0086LATS 010 25 0228Minimum latitude of sea ice the previous winter 006 16 0537

Variance explained by all constraining covariables 148 375 lt 0001

(b) Optimum Individual D 061 154 lt 0001multi-covariate constraining SAMautumn 050 126 lt 0001model covariables LONGE 021 52 lt 0001

SAMprior 017 43 0006

Unexplained residual 246 625 Total variance in taxa composition between samples 394 100

SAM index These allowed identification of maxima in cor-relation between the SAM and phytoplankton communitystructure Response surfaces were derived by evaluating sep-arate CAP analyses for each combination of (i) the tempo-ral positioning of the daily-SAM averaging range and (ii) thelength of the daily-SAM averaging range In constructing theresponse surfaces the range of the averaged daily SAM wascentred on (i) each calendar day individually (1 Januaryndash31 December) through the year associated with each sam-ple and alternatively (ii) relative to the time of sampling andlagged from 1 to 365 d prior to each sample collection datein 1 d increments The length of the SAM averaging rangewas varied in 2 d increments from zero to plus and minus182 d from the centre of the range Similar response surfaceswere constructed relating the correlation between the aver-aged daily SAM and (i) total chlorophyll and (ii) [PO4]

Data management and manipulation summary statisticscorrelation analyses and scatter plots were undertaken in Mi-crosoft Excel (2016) and R (R Core Team 2016) Clusteranalysis and SIMPROF were undertaken using the R pack-age clustsig (Whitaker and Christman 2014) CAP analyseswere conducted using the capscale function in the R packagevegan (Dixon 2003)

3 Results

31 The influence of the SAM on phytoplanktoncommunity composition

CAP analysis and pairwise correlation analysis both indi-cated the presence of a relationship between the SAM andphytoplankton community composition Clustering analysisshowed there to be sufficient and systematic variation in phy-toplankton community composition between samples thatsamples could be grouped

Empirical identification of the time between variation inthe SAM and the manifestation of this variation in the phyto-plankton community structure revealed three maxima in phy-toplankton community composition explained by the SAMThe first of the maxima was an autumn seasonal SAM in-dex (SAMautumn) which was determined to be the average of57 daily SAM estimates centred on the preceding 11 March(11 Februaryndash8 April) SAMautumn explained up to 133 of the variance in phytoplankton community composition es-timated through CAP analysis (Fig 3a Table 1a) The sec-ond of the maxima was a spring seasonal index (SAMspring)which was determined to be the average of 75 daily SAMestimates centred on 25 October (20 Septemberndash3 Decem-ber) SAMspring explained up to 103 of variance in phyto-plankton community composition (Fig 3a Table 1a) Unlikethe other maxima that were related to the time of year thethird of the maxima was timed relative to the date of sample

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3822 B L Greaves et al SAM influences phytoplankton in SIZ

Table 2 (a) Summary statistics for environmental variables (b) correlations between taxa group relative abundances and environmental vari-ables (c) correlations among environmental variables (d) correlations between macronutrient concentrations and environmental variables(e) as in (f) but involving only the 50 of samples collected latest in the springndashsummer Correlations significant at α le 005 are in italicand correlations significant after Bonferroni adjustment are also underlined (α lt 00519 for correlations among environmental variablesα lt 00520 for correlations with taxa group relative abundance)

Environmental variables

D SAM

autu

mn

SAM

prio

r

SAM

spri

ng

LO

NGE

DSS

I

SST

S Y tota

lchl

orop

hyll

(a) Statistics for environmental covariables

Unit days index index index E days C PSU year mg mminus3

Average 96 minus02 01 04 142 65 06 337 ndash 029Min 20 minus08 minus13 minus15 136 minus26 minus18 332 2002 007Max 151 06 20 100 148 gt 365 30 341 2012 070n 52 11 52 11 52 52 5 52 11 49Average standard error of estimate ndash 014 013 014 ndash ndash ndash ndash ndash ndash

(b) Correlations with taxa group relative abundance

Chaetoceros atlanticus minus015 055 057 063 020 minus001 minus020 022 013 037Chaetoceros concavicorniscurvatus 037 036 027 035 minus007 027 025 minus014 011 025Chaetoceros castracanei minus036 minus002 026 020 041 minus012 minus036 minus007 minus007 020Chaetoceros dichaeta 048 038 031 029 minus013 037 035 minus017 020 036Chaetoceros neglectus minus070 minus006 042 024 048 minus040 minus069 056 minus004 033Cylindrotheca closterium 013 009 minus010 minus003 002 032 012 002 minus011 003Dactyliosolen antarcticus 018 037 034 027 minus006 018 013 minus008 006 037Dactyliosolen tenuijunctus minus018 minus044 minus008 minus016 016 minus019 minus017 023 minus002 minus010Dictyocha speculum (silicoflagellate) minus078 minus017 030 014 068 minus041 minus075 036 minus014 017discoid centric diatoms minus057 015 006 024 052 minus011 minus057 021 minus015 021Emiliania huxleyi (haptophyte) minus028 minus038 minus042 minus038 021 012 minus025 minus001 minus037 minus024Fragilariopsis cylindruscurta 026 minus006 minus008 minus009 minus058 minus008 035 minus012 024 minus015Fragilariopsis kerguelensis 023 052 016 025 minus007 019 022 minus046 minus005 007Fragilariopsis pseudonana minus013 022 minus002 022 minus010 minus005 minus003 012 022 002Fragilariopsis rhombica 016 minus039 minus058 minus057 minus013 013 022 minus012 minus024 minus059Fragilariopsis ritscheri 011 minus010 000 minus003 minus002 002 010 minus003 003 minus001Guinardia cylindrus 009 012 minus006 minus006 005 017 010 minus003 minus002 012Nitzschia acicularisdecipiens minus047 minus045 minus029 minus031 042 minus032 minus046 009 minus022 minus019Parmales spp (chrysophyte) minus060 minus029 015 minus009 042 minus042 minus065 036 minus028 016Petasaria heterolepis minus025 minus013 minus027 minus008 015 minus017 minus025 002 minus002 minus004Pseudo-nitzschia lineola minus035 039 019 037 036 minus009 minus035 018 001 026Thalassiothrix antarctica minus016 032 012 016 015 minus011 minus011 minus019 minus015 000

(c) Correlations among environmental variables

SAMautumn 032SAMprior minus006 051SAMspring 004 056 083LONGE minus063 minus017 010 005DSSI 056 018 minus003 007 minus027SST 092 027 minus014 minus003 minus068 060S minus043 minus014 031 021 023 minus013 minus041Y 018 027 035 032 minus024 002 027 minus006total chlorophyll minus002 050 072 069 011 minus008 minus015 014 043

Biogeosciences 17 3815ndash3835 2020 httpsdoiorg105194bg-17-3815-2020

B L Greaves et al SAM influences phytoplankton in SIZ 3823

Table 2 Continued

Environmental variables

D SAM

autu

mn

SAM

prio

r

SAM

spri

ng

LO

NGE

DSS

I

SST

S Y tota

lchl

orop

hyll

(d) Correlations with macronutrients (n= 51)

[NOx ] minus 077 -039 023 004 053 minus 043 minus 072 054 minus014 012[PO4] minus 073 minus 056 minus007 minus026 062 minus 052 minus 070 039 minus013 minus010[SiO4] minus 056 minus 042 026 minus005 040 minus 049 minus 063 039 009 022

(e) Correlations with macronutrients (n= 26 later-in-season 50 of samples)

[NOx ] minus018 minus 058 minus005 minus025 minus023 minus019 002 027 minus017 ndash[PO4] minus013 minus 074 minus051 minus 068 009 minus031 minus001 003 minus002 ndash[SiO4] minus010 minus051 minus004 minus031 minus016 minus035 minus044 minus005 034 ndash

Figure 4 Maxima of SAM influence on phytoplankton community composition SAMprior was determined relative to sample collection thedepicted solid line represents the average temporal location of the 97 d period and the broken lines represent the earliest and latest extent ofthe range associated with the earliest and latest samples

collection for each sample and comprised the average of the97 daily SAM estimates centred 102 d prior to each samplecollection date It explained 99 of the variance in phy-toplankton composition (SAMprior Fig 3b Table 1a) Notethat SAMprior and SAMspring temporally overlapped to vary-ing extents across the 52 samples (Fig 4) and so were notentirely independent covariates for example a sample col-lected in the summer had previous days contributing to bothSAMprior and SAMspring

The optimum CAP model contained four covariates thatexplained the variance in phytoplankton community com-position among samples (Table 1b) While four CAP axeswere statistically significant (p lt 005) the first two axes to-gether explained a total of 311 of the variance in phyto-plankton community composition and the third and fourthaxes together only explained a further 64 (not tabu-lated) Thus Fig 6a illustrates most of the variance explainedby the CAP analysis SAMautumn explained the most vari-ance in community composition (126 ) and SAMprior ex-plained a further 43 of variance (Table 1b) These twoSAM indices were moderately and significantly positively

correlated (r = 051 Table 2c p lt 0001) Both showedsimilar negative correlations (Table 2b) with the relativeabundances of the small diatoms Fragilariopsis rhombica(Fig 5a) and Nitzschia acicularisdecipiens and the coc-colithophorid Emiliana huxleyi and similar positive cor-relations with the abundances of larger diatoms Chaeto-ceros atlanticus Chaetoceros dichaeta and Dactyliosolenantarcticus A further six taxa showed a correlation withSAMautumn but not SAMprior namely positive correla-tions with Chaetoceros concavicorniscurvatus Fragilari-opsis kerguelensis (Fig 5b) Pseudo-nitzschia lineola andThalassiothrix antarctica and negative correlations withDactyliosolen tenuijunctus and the Parmales Three taxashowed correlations with SAMprior but not SAMautumnnamely positive correlations with Chaetoceros neglectus andthe silicoflagellate Dictyocha speculum and a negative cor-relation with Petasaria heterolepis

In total 15 of the 22 taxa groups showed significantpairwise correlations (p lt 005) with one or more of theSAM indices with SAMautumn being the most influential (Ta-ble 2b) showing significant correlation with 12 of the 22 taxa

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3824 B L Greaves et al SAM influences phytoplankton in SIZ

Table3Identifiedtaxa

groupstaxataxacodecellscountedcellsm

easuredaverageindividualcellvolum

eabundance(averagem

inimum

andm

aximum

)averagerelative

abundanceaverage

totalvolumeaverage

relativevolum

eandpercentage

ofsamples

inw

hicheach

taxagroup

was

identified

TaxonTaxa

codeC

ellsC

ellsA

verageA

bundanceR

elativeA

verageA

veragevolum

eSam

plescounted

measured

individualabundance

totalfraction

ofw

ithtaxon

cellvolume

averagevolum

etotalcellvolum

e

Average

Min

Max

Num

berN

umber

microm3

cellsmLminus

1cellsm

Lminus

1cellsm

Lminus

1microm

3m

Lminus

1

Chaetoceros

atlanticusca

356479

131651

0364

22

81382

14

90

Chaetoceros

castracaneicca

4834

9406

038

03

18616

04

48

Chaetoceros

concavicorniscurvatuscc

120200

344320

0135

07

78443

14

77

Chaetoceros

dichaetacd

25631943

491423

02503

13

145999

29

94

Chaetoceros

neglectuscn

634488

17683

0697

35

11906

02

81

Cylindrotheca

closteriumcyc

12250

12117

079

07

410601

77

D

actyliosolenantarcticus

da277

472(61

899)44

0195

16

1860

68027

98

D

actyliosolentenuijunctus

dt1981

13503828

2967

131599

895

36716

100

D

ictyochaspeculum

(silicoflagellate)ds

8184

492010

069

05

99301

15

48

discoidcentric

diatoms

dcx965

12808572

13312

69652

437

55673

100

E

miliania

huxleyi(haptophyte)ehu

17370

6524

0192

08

355201

58

Fragilariopsis

cylindruscurtafcx

39873013

70632

08796

17

44167

09

98

Fragilariopsiskerguelensis

fk1031

40553748

1670

105458

369

49265

98

Fragilariopsis

pseudonanafps

170115

35526

0201

09

1899904

69

Fragilariopsis

rhombica

fr4542

346936

65829

207022

23359

06

100

Fragilariopsisritscheri

fri46

19572

70

8602

11

02002

35

G

uinardiacylindrus

guc110

8110

40515

079

06

225921

41

67

Nitzschia

acicularisdecipiensnix

1133509

251162

0977

57

46705

10

98

Parmales

spp(chrysophyte)parm

3222

838

0668

17

33400

27

Petasaria

heterolepis(other)

pet45

ndash(65)

70

18703

2667

01

6

Pseudonitzschia

lineolapsl

681403

109391

4376

41

8446015

100

Thalassiothrix

antarcticata

112269

(63000)

130

17206

314

42448

85

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B L Greaves et al SAM influences phytoplankton in SIZ 3825

Figure 5 Scatter-plots (a b) examples of phytoplankton taxon relative abundance versus SAMautumn (c) LONGE of sample collectionversus D and (d) [PO4] versus SAMautumn Each figure shows r2 and p associated with the relationship A line of least-squares best fit isprovided to give an indication of trend

groups When applying the conservative Bonferroni-adjustedα = 00025 seven taxa groups showed significant correlation(p lt 00025) with any SAM index and four with SAMautumn

SAMprior and SAMspring represented a similar time span inthe spring immediately prior to sampling (Fig 4) and werestrongly and significantly correlated (r = 083 Table 2cp lt 0001) Samples were collected over a calendar rangeof 140 d (20 Octoberndash28 February Table 2a) and thus the97 d period represented by SAMprior varied in its positionin the calendar across the 140 d spread of the 52 samples(Fig 4) SAMprior and SAMspring also showed similar corre-lation signs with taxa group relative abundances (Table 2b)It was not possible however to determine whether the pre-season SAM influence was a spring effect or a prior-to-sampling effect and whilst both appear to be important ex-planatory terms only SAMprior was retained in the optimumCAP model (Table 1b)

In the optimum multi-covariate CAP model D explainedthe greatest proportion of the observed variance in phyto-plankton community composition (Table 1b) D was signif-icantly correlated (p lt 00025) with SST S and DSSI andthe variable singly captured the most variation in phytoplank-ton community composition associated with seasonal suc-cession Alone it explained 154 of the total variance (Ta-

ble 1b) with its effect on the phytoplankton community be-ing approximately orthogonal to that of the SAM (Fig 6a) Aweak positive relationship detected between SAMautumn andD indicated a weak trend of sampling later in the springndashsummer period in years with a higher autumn SAM (r =032 Table 2c p = 002) but otherwise the SAM indicesand D were un-related

A total of 10 taxa groups showed significant correlation(p lt 005) between their relative abundance and D (Ta-ble 2b) Chaetoceros castracanei C neglectus D specu-lum E huxleyi N acicularisdecipiens Parmales P line-ola and the discoid centric diatoms showed negative relative-abundance correlations with D indicating greatest relativeabundance early in the springndashsummer while C concavicor-niscurvatus and C dichaeta showed greater relative abun-dance later in the springndashsummer A negative correlation(minus063 p lt 0001) was detected between the longitude ofindividual sample collection (LONGE) and D indicatingthat samples collected later in the springndashsummer were morelikely to have been collected towards the west in the sampledregion (Table 2c Fig 5c)

Following cluster analysis similarity profile (SIMPROF)permutation analysis identified seven significantly differentgroups (p lt 005) with samples loosely grouped on the ba-

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3826 B L Greaves et al SAM influences phytoplankton in SIZ

Figure 6 (a) CAP analysis of phytoplankton community composition Dots represent individual samples with colours corresponding tosignificant clusters (Fig 6b) The 22 phytoplankton taxagroups are overlain as weighted averages of their sample scores (red abbreviationsafter Fig 2) with positions plotted with a 3-times-larger distance from the origin to more easily visualise their relationships with constrainingenvironmental variables Linear projections of the significant constraining environmental covariates appear as blue arrows the length andangle of which represent the magnitude and direction of influence of each variable on community composition The inset shows the taxalocated close to the origin diatoms fri and cyc collocating (b) Cluster analysis dendrogram of the 52 samples based on similarities inphytoplankton community structure using colour to show seven significantly different groups (numbered 1ndash7 solid lines α = 005) Samplelabels contain season and voyage (eg 0809v2b= austral springndashsummer over 2008ndash2009 voyage designation 2 sample b is the secondsample obtained from the SIZ during that voyage) SAMautumn value SAMprior value and the D value

sis of their within-season successional maturity (D) and theSAM (Fig 6b) and demonstrated that there were signifi-cant differences between the community composition of thesamples The group structure determined by cluster analy-sis was displayed in the CAP ordination (using colour) todemonstrate that samples that clustered together were indeedclose to one another in the two-dimensional (2D) ordina-tion (Fig 6a) with their positioning further indicating theinfluences of D and the SAM on cluster groupings This lentconfidence that the 2D ordination was a reasonable approx-imation to the full high-dimensional structure As we knewthe values for the environmental covariates for each sam-ple it was possible to determine the correlation between the2D CAP solution and each environmental covariate We dis-played these correlations as a projected vector (arrow) wheredirection indicates the sign and length indicates strengthThis showed samples in clusters 3 and 4 (Fig 6b) were com-monly associated with a more positive SAM while those inclusters 5 6 and 7 were commonly associated with morenegative SAM values Samples in clusters 2 and 5 were com-

monly collected earlier in the springndashsummer period (lowerD) while those in clusters 1 4 6 and 7 were commonly col-lected later (Fig 6)

Other considered environmental covariates that did notsignificantly influence community composition were thetime of the day that a sample was collected and the mini-mum latitude reached by sea ice cover in the previous winter(Supplement Table S1)

These analyses were also undertaken using phytoplanktonabsolute abundances rather than with relative abundances asreported above The analysis of absolute abundance showedsimilar temporal peaks in variance explained (SupplementFig S4) although it explained less variance (SAMautumn ex-plaining 109 SAMspring 91 and SAMprior 92 ) (Ta-ble S3) Individual taxa correlations with SAM indices (Ta-ble S4) showed a similar pattern to those estimated using rel-ative abundances (Table 2b)

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B L Greaves et al SAM influences phytoplankton in SIZ 3827

32 Influence of the SAM on phytoplanktonproductivity

Two indicators of the influence of the SAM on phytoplank-ton productivity were obtained (i) the influence of the SAMon satellite-derived total chlorophyll and (ii) the influence ofthe SAM on macronutrient concentrations indicating nutri-ent drawdown associated with productivity Using the timesand locations of the 52 samples over the 11 years of ourstudy satellite-derived total chlorophyll showed positive cor-relation with all SAM indices r = 050 (p lt 0001) withSAMautumn r = 072 (p lt 0001) with SAMprior and r =069 (p lt 0001) with SAMspring (Table 2c) Peaks in thecorrelation of total chlorophyll with the SAM were evidentin the preceding autumn and spring and prior to sampling inresponse surfaces for NASA satellite total chlorophyll alongwith a peak in early winter (Fig S1) While further data arerequired to confirm this correlation the results obtained inthis study supported the presence of a positive relationshipbetween productivity and the SAM

The observed concentrations of the macronutrients NOx PO4 and SiO4 showed significant negative correlationswith SAMautumn (r =minus039 minus056 minus042 respectively Ta-ble 2d p 0005 lt 0001 0002 respectively) The concen-trations of these nutrients showed stronger negative correla-tions with SAMautumn when the 50 of samples collectedlatest in the springndashsummer season was considered (r =minus058 minus074 minus051 Table 2e p 0002 lt 0001 0008respectively) Macronutrient concentrations were unrelatedto either SAMprior or SAMspring (Table 2d) Peaks in neg-ative correlation of the SAM on [PO4] were evident in thepreceding autumn and spring prior to sampling in responsesurfaces with the peaks being more negative when only the50 of samples collected later in the springndashsummer wereconsidered (Fig S2) The concentrations of macronutrientsalso showed expected decline through the springndashsummercorrelations between [NOx] [PO4] and [SiO4] withD wereminus077minus073 andminus056 respectively (Table 2d p lt 0001lt 0001 lt 0001 respectively)

33 Observed occurrence and abundance

Abundance of individual taxa groups averaged 133 cells permillilitre and ranged to a maximum of 8796 cells per mL (Ta-ble 3) Individual cell volume ranged from 8 microm3 for the Par-males spp to gt 60 000 microm3 for the diatoms Dactyliosolenantarcticus and Thalassiothrix antarctica Average relativeabundance ranged from 02 for the diatom Fragilariopsisritscheri to 17 for the combined taxa group Fragilariop-sis cylindruscurta Of the 22 taxa groups resolved in thisstudy four taxa groups were identified in all 52 samples and11 taxa groups were identified in more than 90 of samples(Table 3)

4 Discussion

41 The SAM and phytoplankton communitycomposition

Our results show that the SAM shows a relationship withthe community composition of phytoplankton in the sea-sonal ice zone (SIZ) of the Southern Ocean (SO) This con-clusion was supported by a combination of three analyses(i) Permutation-based analyses of cluster structure demon-strated that the 52 samples were separable into seven statisti-cally different groups on the basis of community abundancecomposition of the 22 taxa groups (Fig 6b) and thus thatthere was variation between samples that might be explain-able with known environmental variables if clustering hadrevealed few or no clusters it would have been indicative oflevels of community variance (either high or low) unlikelyto be systematically explainable with the environmental vari-ables (ii) CAP analysis identified the SAM as a significantexplanatory variable on the structure of the phytoplanktoncommunity (Table 1b) and showed that groups identified incluster analysis were generally distinguished by the SAMand the D that a sample was collected (Fig 6) (iii) 15 ofthe 22 taxa groups resolved showed significant pairwise cor-relations (p lt 005) between relative abundance and at leastone of the three derived SAM indices (Table 2b)

The derived SAM index with greatest influence on phy-toplankton community composition SAMautumn (Figs 3 4)explained 126 of the variance of phytoplankton commu-nity composition in the optimum multi-variable CAP model(Table 1b) SAMautumn represented the average SAM aroundthe time that sea ice was extending northward through theSIZ (Fig 1a) At this time phytoplankton productivity inthe SIZ would have declined to around 30 of its mid-summer maximum (Moore and Abbott 2000 Arrigo et al2008 Constable et al 2014) and phytoplankton would bepreparing for winter by variously producing energy stor-age products producing resting spores or cysts reducingmetabolic rate and engaging in heterotrophic consumptionfor energy (Fryxell 1989 McMinn and Martin 2013) Theformation of sea ice reduces available light by as much as999 (McMinn et al 1999) severely limiting light forphytoplankton for around half of each year at the rangeof longitude sampled latitude 64 S was covered in seaice for half the time across the sampled years (Fig 1a)Windier conditions associated with a more positive SAM inautumn may delay the consolidation of sea ice into largerfloes (Roach et al 2018) extending the phytoplankton grow-ing season and possibly increasing the relative abundanceof taxa that occur later in the springndashsummer season Thequantity of phytoplankton that survive the Antarctic winteris extremely low (McMinn and Martin 2013) and the abun-dance of taxa present and their metabolic condition whenthe autumn sea ice forms may strongly influence their vi-ability relative vigour and availability to seed the subse-

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3828 B L Greaves et al SAM influences phytoplankton in SIZ

quent post-winter bloom This possibility was supported bythe observation that the only two taxa groups observed tohave significantly (p lt 005) higher relative abundance laterin the springndashsummer the Chaetoceros species C dichaetaand C concavicorniscurvatus were both observed to alsoshow significantly higher relative abundances when the pre-ceding SAMautumn was more positive (Table 2b) Thus SAM-induced effects on phytoplankton in the autumn could wellinfluence the phytoplankton community structure in the fol-lowing post-winter productive season

Extending the springndashsummer productive season by de-laying the autumn consolidation of sea ice may result inmore prolonged declines in relative abundance of taxa thatare more prolific earlier in the springndashsummer and may thusreduce the population from which the following post-winterbloom is initiated Of the eight taxa groups showing sta-tistically higher relative abundance earlier in the springndashsummer (p lt 005) three showed corresponding statisticallylower relative abundances with higher preceding SAMautumn(Emiliana huxleyi Nitzschia acicularisdecipiens and Par-males spp p lt 005 Table 2b) supporting this conjec-ture Of the remaining five taxa groups of the eight fourshowed no detectable relationship with SAMautumn and one(Pseudonitzschia lineola) showed a positive relationship

Two other derived SAM indices were found to influencephytoplankton SAMspring and SAMprior These indices weredifficult to distinguish due to their largely overlapping timeperiods (Fig 4) and they were strongly correlated (r = 083p lt 005 Table 2c) with similar influence on taxonomicabundances (Table 2b) SAMprior was the preferred parame-ter for the multiparameter CAP model in which it explained43 of total variance Windier and stormier conditions as-sociated with a higher SAM in the months prior to sam-pling would increase nutrient input to the euphotic zone fromdeeper waters (Lovenduski and Gruber 2005) promotingproductivity whilst at the same time episodically dilutingsurface phytoplankton through deeper mixing More stormyconditions may also have brought about a faster break-upof winter sea ice promoting earlier spring phytoplanktongrowth Conversely windier conditions would also restrictstratification of the surface ocean precluding phytoplanktonbloom formation lessening productivity (Fitch and Moore2007) and reducing the abundance of early blooming taxaThis may explain the responses of Emiliania huxleyi and thecombined Nitzschia acicularisdecipiens group which bothshowed early maximum abundances (r =minus028 and minus047respectively with D p lt 005 Table 2b) and also nega-tive correlations with SAMspring and SAMprior (r =minus029to minus042 p lt 005 Table 2b) Five other taxa groups withearly maximum abundance (negative correlation with Dp lt 005) showed no detectable correlation with SAMspringand one (Pseudonitzschia lineola) showed a positive rela-tionship indicating that their abundances were determinedby environmental factors that prevail early in the season butnot those factors altered by variations in the SAM Histori-

cally the variance in the SAM is lower in the spring quar-ter than in other quarters (NOAA 2005) perhaps explainingwhy SAMspring and SAMprior explained less variance in com-munity composition than SAMautumn

We expected the SAM prior to sampling (SAMprior andSAMspring) would show a relationship with phytoplanktoncomposition and a lesser relationship of the SAM in thewinter is plausible because the surface of the ocean is in-sulated from atmospheric conditions by sea ice The relation-ship with the SAM the previous autumn was not expected butis also plausible as it coincides with the time when sea ice isforming and thus a critical time for phytoplankton preparingto hibernate the half-year of sea ice cover We also observeda similar relationship between SAMautumn and (i) NASAsatellite total chlorophyll and (ii) macronutrient concentra-tions across all samples as well as (iii) a stronger correla-tion with macronutrient concentrations when only the sam-ples collected in the latter half of the season were considered(Table 2c d and e respectively) We also observed maximain the autumn SAM relationship in response-surface analy-ses of the correlation between the SAM and (i) NASA satel-lite total chlorophyll and (ii) [PO4] in all samples as well as(iii) a stronger maxima with [PO4] when only the samplescollected later in the season were considered (Figs S1 andS2) Both total chlorophyll and [PO4] were observationallyindependent of the taxonomic cell counts and whilst [PO4]was estimated from parallel samples as the taxonomic analy-sis NASA satellite total chlorophyll had no material connec-tion with collected samples being linked only geographicallyand temporally and thus offers independent support for theunexpected observation that phytoplankton community com-position in the springndashsummer is related to the SAM in theprevious autumn The empirically defined SAMautumn alsoshowed significant (p lt 005) pairwise correlations with 12of the 22 taxa groups resolved (Table 2b)

42 Effect of the SAM on phytoplankton taxa

Nothing has been previously reported with respect to the cli-matic preferences of the majority of taxa identified in thisstudy and only 10 of the 22 taxa groups considered in ourresearch had data records in the Ocean Biogeographic In-formation System (OBIS 2020) Some of the observed taxahave been reported to show various relationships with en-vironmental factors including sea-surface temperature timethrough the season and latitude but often at the taxonomiclevel of genera rather than at a species level (Burckle et al1987 Chiba et al 2000 Waters et al 2000 Green and Sam-brotto 2006 Gomi et al 2007) We however observed dif-fering responses to environmental variables among closelyrelated taxa This was exemplified by the opposite correla-tions of Chaetoceros species C dicheata and C neglectuswith D (048 and minus070 respectively p lt 00025 Table 2b)and the opposite correlations of Fragilariopsis species Frhombica and F kerguelensis with SAMautumn (minus039 and

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B L Greaves et al SAM influences phytoplankton in SIZ 3829

052 respectively p lt 005 Table 2b Fig 5a b) The strongand opposite response to these variables by species belong-ing to the same genus indicates the importance of species-level observation in detecting subtle changes in pelagic phy-toplankton communities

A third of analysed taxa comprising 7 taxa and 23 of all counted cells showed no detectable relationship withthe SAM This could be due to large errors associated withlow counts of rarer taxa because unaccounted variation wasmasking any relationship or because the taxa were insensi-tive to the SAM There is less chance of detecting relation-ships between taxa and environment variables when fewerindividuals are counted however some less represented taxadid show relationships with SAM indices (eg Emilianiahuxleyi |r|gt 038 Table 2b) Of the 22 taxa resolved 5showed no significant relationships with either the SAM orD All were comparatively scarce and together representedonly 2 of all cells counted Assessing species composi-tions across a greater fraction of each sample and thus count-ing more of the scarcer taxa may have revealed relationshipsbetween these rarer taxa and environmental variables (Nak-agawa and Cuthill 2007) Yet it remains possible that thesetaxa are actually unaffected by seasonal succession and theSAM instead responding to other environmental variablesthat were not measured as part of this study or that they re-main as persistent but relatively rare background taxa withrespect to the overall phytoplankton assemblage

This is the first study to show a link between variationin the SAM and the composition of phytoplankton commu-nities in the SO although similar findings have been re-ported for other major climatic phenomena in other partsof the globe The climatically similar Northern HemisphereAnnular Mode (NAM) causes increased westerly winds anddeeper mixed layers at middle to high northern latitudes inits positive phase (Nehring 1998 Thompson et al 2003Kahru et al 2011) The NAM has been related to the tim-ing abundance and biomass of phytoplankton taxa at highnorthern latitudes (Nehring 1998 Belgrano et al 1999 Ot-tersen et al 2001 Blenckner and Hillebrand 2002) andto the delayed occurrence of maximum chlorophyll in theNorth Atlantic Summer (Kahru et al 2011) Similarly theEl NintildeondashSouthern Oscillation (ENSO) equatorial mode hasbeen shown to influence the distribution and abundance ofphytoplankton in the tropical oceans (Blanchot et al 1992)

Phytoplankton are the pastures of the oceans and it is plau-sible that the climate in both autumn and spring influencethe phytoplankton community composition of phytoplank-ton and their ecological progression through the productivespringndashsummer period in the SIZ Climate change impactshave now been documented across every type of ecosystemon Earth (Scheffers et al 2016 Harris et al 2018) and thedistribution abundance phenology and productivity of phy-toplankton communities throughout the world are changingin response to warming acidifying and stratifying oceans(Hoegh-Guldberg and Bruno 2010) We have detected an

association between variation in phytoplankton communitycomposition and variation in the SAM over a relatively brief11-year monitoring period despite all the other environmen-tal factors that elicit variability in phytoplankton communi-ties in the SIZ of the SO

43 The effects of the SAM on productivity andbiomass

A positive SAM has previously been shown to be associ-ated with increased standing stocks and productivity of phy-toplankton in the SIZ of the SO (Arrigo et al 2008 Boyce etal 2010 Soppa et al 2016) In the SIZ above the AntarcticDivergence nutrients are replenished from the deeper oceanthrough the unproductive winter and the levels of nutritionremaining at the end of summer integrate the total draw-down of nutrients by phytoplankton production over the en-tire springndashsummer growing season (Arrigo et al 1999) Weobserved this nutrient drawdown through the springndashsummeras the negative correlation between all macronutrient con-centrations and D (Table 2d) We also observed a nega-tive relationship between all macronutrient concentrations inthe springndashsummer and the previous SAMautumn (Table 2dFig 5d) suggesting that an elevated SAM in autumn leadsto greater productivity and thus greater nutrient drawdownduring the following springndashsummer The nutrient concen-trations at the end of the springndashsummer productive seasonwould be expected to best represent the total productivityover the season we observed that the correlation between nu-trient concentrations and SAMautumn were higher when onlythe 50 of samples collected later in the springndashsummerwere considered (Table 2e) further supporting the conjec-ture that a higher SAM in the autumn is linked with greaterproductivity through the following springndashsummer

The observed positive relationship between total chloro-phyll and all the SAM indices (r = 05 to 072 p lt 00025Table 2c) and the presence of apparent spring and autumnmaxima in the response surfaces of the variance in totalchlorophyll explained by the SAM (Fig S1) further sup-port the conjecture that a more positive SAM is linked withgreater total chlorophyll and thus greater total productivityin the SIZ The total chlorophyll data considered were limitedto the 52 samples collected that is estimated for the timesand locations of each sample collection Estimates werecoarsely determined as interpolations of available monthlypredictions (Fig S3) and estimates could be thus obtainedfor only 49 of the 52 samples Yet there are indicators of re-liability in the sparse information the diatom Fragilariopsisrhombica is always relatively small (Table 3) and when therelative abundance of this taxon was high total chlorophyllwas lower (r =minus059 p lt 00025 Table 2b) and when therelative abundance of larger diatoms were high total chloro-phyll was also often high (eg Dactyliosolen antarcticusr = 037 p lt 005 Table 2b)

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3830 B L Greaves et al SAM influences phytoplankton in SIZ

44 Implications

The SIZ is a productive region of the SO (Moore and Abbott2000) and changes to the SIZ phytoplankton communityhave potentially far-reaching implications for the ecosystemservices these organisms provide including carbon exportto the deep ocean and supporting the productivity of almostall Antarctic life Increases in the relative abundance of thelarger Chaetoceros spp diatoms would favour grazing bylarge metazooplankton especially krill (Boyd et al 1984Kawaguchi et al 1999 Moline et al 2004) which linkphytoplankton to whales seabirds seals and most higherAntarctic life forms (Smetacek 2008) Such changes wouldalso increase the efficiency of the biological pump as thelarger phytoplankton sink more rapidly than small phyto-plankton (Alldredge and Gotschalk 1989) and increasedgrazing by krill would reparcel some phytoplankton biomassinto faeces that would also sink more rapidly (Cadeacutee etal 1992) Such changes in carbon flux and trophodynam-ics would act as a negative feedback on climate change byspeeding the sequestration of carbon to the deep ocean

The SAM is predicted to become increasingly positivein the future (Arblaster and Meehl 2006 Swart and Fyfe2012 Gillett and Fyfe 2013 Abram et al 2014 Solomonet al 2016) Our results cannot necessarily be extrapolatedto infer changes that will likely occur as the SAM contin-ues to increase as evolutionary responses can partly miti-gate adverse effects on phytoplankton of longer-term climatechange and future changes in climate are likely to imposeother co-stressors on phytoplankton inhabiting these waters(Lohbeck et al 2014 Schluumlter et al 2014 Deppeler andDavidson 2017) Our study showed that some of the vari-ation in the phytoplankton composition in the seasonal icezone was significantly related to variation in the SAM andthat the sign and magnitude of the correlation with the SAMdiffered among species

5 Conclusions

Statistical analyses indicated that together the autumn andspring SAM explained a higher percentage (179 ) of thevariation in phytoplankton community composition than anyvariable mostly due to the autumn SAM (up to 133 ) Intotal this exceeded the variance explained by any other vari-able even that attributable to the time of the season thatthe sample was collected (154 ) or other critical phys-ical variables such as temperature salinity and latitudeFurthermore 15 of the 22 phytoplankton taxa identified inthis study showed significant correlation with the SAM andthere were indications that a more positive SAM was relatedto increased phytoplankton productivity in the SIZ Whilethis study was limited in both timespan (11 austral springndashsummers) and the overall variance in phytoplankton compo-sition explained by all the constraining variables (375 ) it

suggests that the phytoplankton of the SIZ are indeed sensi-tive to changes in the SAM and thus possibly responsive toclimate change

Data availability The dataset used in this paper is available athttpsdoiorg10261795d9181f7308bd (Greaves et al 2019)

Supplement The supplement related to this article is available on-line at httpsdoiorg105194bg-17-3815-2020-supplement

Author contributions Author contributions BLG contributed toconceptualisation data curation formal analysis investigationmethodology software and supervision validation visualisationwriting of the original draft writing and review and editing ATDcontributed to conceptualisation funding acquisition formal anal-ysis methodology project administration resources supervisionwriting and review and editing ADF contributed to formal analy-sis methodology resources writing and review and editing JPMcontributed to formal analysis methodology software writing andreview and editing AM contributed to project administration su-pervision writing and review and editing AMcM contributed tofunding acquisition project administration resources writing andreview and editing SWM contributed to conceptualisation fund-ing acquisition formal analysis writing and review and editing

Competing interests The authors declare that they have no conflictof interest

Acknowledgements Sampling on Astrolabe was supported bya FrenchndashAustralian research collaboration The Institut PolaireFranccedilais Paul-Eacutemile-Victor supported access to the ship and fieldoperations The biogeochemical data collection was coordinatedby Alain Poisson and Nicolas Metzl Sorbonne Universiteacute andBronte Tilbrook CSIRO Oceans and Atmosphere Steve Rintoul(CSIRO) and Rose Morrow (LEGOS) coordinated the collection ofsalinity and temperature data The Antarctic Climate and Ecosys-tems CRC and the Integrated Marine Observing System are thankedfor supporting the operation of sensors the collection of water sam-ples and nutrient analyses reported in this study Alan Poole MattSherlock John Akl Kate Berry Lesley Clementson Brian Grif-fiths (CSIRO) Rick van den Enden Rob Johnson (AAD) and themany dedicated volunteers and shipsrsquo officers and crew are thankedfor their important contributions to the field efforts and data man-agement We thank the University of Tasmania and the AustralianAntarctic Division for the space and resources needed to undertakethis work Thanks to Nathaniel Bindoff and Simon Wotherspoon fortheir consideration of parts of the paper Thanks are due to the re-viewer Damiano Righetti for the valuable input he provided in par-ticular for pointing out ambiguities and small errors and improvingthe clarity of the paper and an anonymous reviewer for the struc-tural and theoretical considerations Total chlorophyll data used inthis paper were produced with the Giovanni online data system de-veloped and maintained by the NASA GES DISC

Biogeosciences 17 3815ndash3835 2020 httpsdoiorg105194bg-17-3815-2020

B L Greaves et al SAM influences phytoplankton in SIZ 3831

Financial support This research has been supported by the Uni-versity of Tasmania (Institute of Marine and Antarctic Studies) bythe Australian Governmentrsquos Cooperative Research Centre programthrough the Antarctic Climate and Ecosystems CRC the AustralianAntarctic Division (projects 40 and 4107) and by the Australian Re-search Councilrsquos Special Research Initiative for Antarctic GatewayPartnership (project no SR140300001)

Review statement This paper was edited by Julia Uitz and re-viewed by Damiano Righetti and one anonymous referee

References

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Turner J Summerhayes C Sparrow M Mayewski P ConveyP di Prisco G Gutt J Hodgson D Speich S Worby TBo S and Klepikov A Antarctic climate change and the envi-ronment ndash 2015 update Antarctic Treaty Consultative MeetingSofia Bulgaria June 2015 IP 92 2015

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httpsdoiorg105194bg-17-3815-2020 Biogeosciences 17 3815ndash3835 2020

  • Abstract
  • Introduction
    • Importance of the SIZ phytoplankton bloom
    • The Southern Annular Mode
    • The hypothesis
      • Methods
        • Phytoplankton relative abundance
        • Environmental covariates
        • Statistical analysis
          • Results
            • The influence of the SAM on phytoplankton community composition
            • Influence of the SAM on phytoplankton productivity
            • Observed occurrence and abundance
              • Discussion
                • The SAM and phytoplankton community composition
                • Effect of the SAM on phytoplankton taxa
                • The effects of the SAM on productivity and biomass
                • Implications
                  • Conclusions
                  • Data availability
                  • Supplement
                  • Author contributions
                  • Competing interests
                  • Acknowledgements
                  • Financial support
                  • Review statement
                  • References

    3816 B L Greaves et al SAM influences phytoplankton in SIZ

    1 Introduction

    Phytoplankton are the primary producers that feed almost alllife in the oceans In the Southern Ocean (SO) defined asthe southern portions of the Atlantic Ocean Indian Oceanand Pacific Ocean south of 60 S (Arndt et al 2013) springndashsummer phytoplankton blooms in the seasonal ice zone (SIZ)feed swarms of krill which in turn are key food for sea-birds fish whales and almost all Antarctic life (Smetacek2008 Cavicchioli et al 2019) Phytoplankton also play acritical role in ameliorating global climate change by captur-ing carbon through photosynthesis Around one-third of thecarbon fixed by phytoplankton in SIZ of the SO sinks out ofthe surface ocean (Henson et al 2015) more than the globalocean average of around 20 (Boyd and Trull 2007 Ciais etal 2013 Henson et al 2015) With total productivity withinthe SIZ of the SO estimated at 68ndash107 Tg C yrminus1 (Arrigo etal 2008) this equates to 23ndash36 Tg C yrminus1 around 02 ndash03 of the estimated annual global marine biota export of13 Pg (Ciais et al 2013) being sequestered to the deeperocean for climatically significant periods of time likely hun-dreds to thousands of years (Lampitt and Antia 1997) Evenso the SIZ of the SO shows a net release of CO2 fromthe ocean to the atmosphere due to off-gassing of carbon-rich deep-ocean water upwelling at the Antarctic Divergence(Takahashi et al 2009) Thus any changes in the composi-tion and abundance of phytoplankton in the SIZ are likely toinfluence both the trophodynamics of the SO and the contri-bution of the region to oceanicndashatmospheric carbon flux

    Global standing stocks of phytoplankton are estimated tohave been declining by as much as 1 per year a declinelargely attributed to rising surface ocean temperature (Boyceet al 2010 2011 Mackas 2011) Furthermore global phy-toplankton productivity is predicted to drop by as much as9 from the years 1990 to 2090 (RCP85 ldquobusiness asusualrdquo) with a decline across most of the Earthrsquos ocean area(Bopp et al 2013) In contrast higher latitudes includingthe SIZ of the SO are predicted to experience an increasein phytoplankton productivity due to changes to seasonal iceextent and duration (Parkinson 2019 Turner et al 2013)andor increased upwelling of nutrient-rich deep ocean waterat the Antarctic Divergence (Steinacher et al 2010 Bopp etal 2013 Carranza and Gille 2015)

    11 Importance of the SIZ phytoplankton bloom

    The Antarctic SIZ is one of the most productive parts of theSO (Carranza and Gille 2015) It is also a significant com-ponent of the global carbon cycle by virtue of both carbonsequestration by phytoplankton (Henson et al 2015) as wellas upwelling and off-gassing of carbon-rich deep ocean wa-ter (Takahashi et al 2009) It is one of the largest and mostvariable biomes on Earth with sea ice extent varying fromaround 20 million km2 during winter to only 4 million km2

    in summer (Turner et al 2015 Massom and Stammerjohn

    2010 Parkinson 2019) The most macronutrient-rich surfacewaters of the SIZ occur over the Antarctic Divergence a cir-cumpolar region of the SO located at around 63 S wherecarbon- and nutrient-rich water upwells to the surface sup-plying the nutrients that drive much of the phytoplanktonproduction in the SO (Lovenduski and Gruber 2005 Car-ranza and Gille 2015)

    In winter phytoplankton growth is limited by light avail-ability and temperature In spring and summer phytoplank-ton can proliferate in the high-light high-nutrient waters thattrail the southward retreat of sea ice (Fig 1a b) (Wilson etal 1986 Smetacek and Nicol 2005 Lannuzel et al 2007Saenz and Arrigo 2014 Rigual-Hernaacutendez et al 2015)The SIZ supports high phytoplankton standing stocks andproductivity and phytoplankton abundance in blooms candouble every few days (Wilson et al 1986 Sarthou et al2005) Wind speed is a primary determinant of phytoplank-ton bloom development in the SIZ with calmer conditionsfostering shallow mixed depths that maintain phytoplanktoncells in a high-light environment and maximise productivity(Savidge et al 1996 Fitch and Moore 2007) Phytoplank-ton populations are characterised by large-scale spatial andtemporal variability (Martin et al 2012) with only 17 ndash24 of ice edge waters experiencing phytoplankton bloomsin any springndashsummer period (Fitch and Moore 2007)

    12 The Southern Annular Mode

    The Southern Annular Mode (SAM) which is also variouslyalso called the High-Latitude Mode and the Antarctic Oscil-lation is well-represented by two alternative definitions (a)the normalised zonal mean sea-level pressure at 40 S mi-nus that at 65 S (Gong and Wang 1999 Marshall 2003)or (b) the principal mode of atmospheric circulation at highlatitudes of the Southern Hemisphere The SAM reflects theposition and intensity of a zonally symmetric structure of at-mospheric circulation in the Southern Hemisphere circlingthe Earth (annular) at around 50 S and it has been defined asthe alternating pattern of strengthening and weakening west-erly winds in conjunction with high- to low-pressure bands(Ho et al 2012) Variation in the SAM typically describesaround 35 of total Southern Hemisphere climate variabil-ity (Marshall 2007) and the SAM is currently the dominantlarge-scale mode through which climate change is expressedat SO latitudes (Thompson and Solomon 2002 Lenton andMatear 2007 Lovenduski et al 2007 Swart et al 2015)Between 1979 and 2017 the value of daily SAM averaged004 index points ranged fromminus513 to 464 and had a stan-dard deviation of 138 (after data by NOAA 2017) Averagemonthly SAM varied from minus27 to 25 index points over the11 years studied (Fig 1c)

    There was a trend toward more positive SAM from 1979to 2017 of 0011 index points per year (NOAA 2017) at-tributed to both ozone depletion (Thompson and Solomon2002 Arblaster and Meehl 2006 Gillett and Fyfe 2013

    Biogeosciences 17 3815ndash3835 2020 httpsdoiorg105194bg-17-3815-2020

    B L Greaves et al SAM influences phytoplankton in SIZ 3817

    Jones et al 2016) and increasing atmospheric greenhousegas concentrations (Thompson et al 2011) The long-termaverage SAM is now at its most positive level for at least thepast 1000 years (Abram et al 2014) Continuing increases inatmospheric greenhouse gases are expected to drive a furtherpositive increase in the SAM in all seasons (Arblaster andMeehl 2006 Swart and Fyfe 2012 Gillett and Fyfe 2013)despite the expected recovery in stratospheric ozone concen-trations to pre-ozone hole values by around 2065 (Son et al2009 Schiermeier 2009 Thompson et al 2011 Solomon etal 2016)

    A more positive SAM indicates the occurrence of astrengthening circumpolar vortex (Marshall 2003 Ho etal 2012) leading to stronger westerly winds and increasedstorminess at high latitudes (Hall and Visbeck 2002 Kwokand Comiso 2002 Lovenduski and Gruber 2005 Arblasterand Meehl 2006) These changes are particularly markedsouth of 60 S in the atmospheric Southern CircumpolarTrough (Hines et al 2000 Mackintosh et al 2017) a re-gion characterised by strong winds with variable direction(Taljaard 1967) Stronger winds associated with more pos-itive SAM may result in increased transport of surface wa-ter northward from the Antarctic Divergence by Ekman drift(Lovenduski and Gruber 2005 DiFiore et al 2006) poten-tially driving increased upwelling of nutrient- and carbon-rich deep ocean water at the Antarctic Divergence (Hall andVisbeck 2002) More positive SAM is also associated withreduced near-surface air temperature over the SIZ due to anincreased frequency of strong southerly winds and increasedcloud cover (Lefebvre et al 2004 Sen Gupta and England2006 Marshall 2007) Sea ice extent around the Antarcticcontinent shows zonal relationships with the SAM with pos-itive relationships between the SAM and sea ice extent inthe western Pacific and Indian sectors of the SO and nega-tive or non-existent relationships in other sectors (Kohyamaand Hartmann 2016) Wind also affects the nature of the seaice breaking up floes via wave interactions increasing flood-ing and changing pack ice density (compressing or openingup the pack) and contributing to ice formation by generatingfrazil ice (Massom and Stammerjohn 2010 Squire 2020)Lower sea-surface temperatures have been observed to lagpositive SAM events by 1 to 4 months (Lefebvre et al 2004Meredith et al 2008) and changes in the SAM may takeweeks to months to be manifested in phytoplankton commu-nities (Sen Gupta and England 2006 Meredith et al 2008)Extreme SAM events might also impact phytoplankton com-munities for multiple years (Ottersen et al 2001)

    By modulating upwelling ocean mixed depth air temper-ature and sea ice characteristics and duration it is likely thata more positive SAM will affect the composition and abun-dance of phytoplankton in the SIZ of the SO Lovenduski andGruber (2005) predicted that more positive SAM would sup-port higher phytoplankton productivity and subsequent anal-yses by Arrigo et al (2008) Boyce et al (2010) and Soppaet al (2016) have confirmed a positive relationship between

    the SAM and phytoplankton standing stocks and productivitysouth of 60 S in the SIZ

    13 The hypothesis

    Based on the predicted and observed positive relationshipsbetween the SAM and phytoplankton standing stocks andproductivity in the SIZ of the SO we hypothesised thatchanges in the SAM could also elicit changes in the compo-sition of the phytoplankton community To test this hypothe-sis we conducted a scanning electron microscopic survey ofhard-shelled phytoplankton in surface waters of the AntarcticSIZ using samples collected between October and Februaryeach springndashsummer over 11 consecutive years (2002ndash2003to 2012ndash2013) We then related the composition of thesecommunities to environmental variables including the SAM

    2 Methods

    A total of 52 surface-water samples were collected from theseasonal ice zone (SIZ) of the Southern Ocean (SO) across11 consecutive austral springndashsummers from 2002ndash2003 to2012ndash2013 The samples were collected aboard the Frenchre-supply vessel MV LrsquoAstrolabe during resupply voyagesbetween Hobart Australia and Dumont drsquoUrville Antarc-tica between 20 October and 28 February Most sampleswere collected from ice-free water although some were col-lected south of the receding ice edge (Fig 1a)

    The sampled area was in the Indian sector of the SO span-ning 270 km of latitude between 62 and 645 S and 625 kmof longitude between 136 and 148 E (Fig 2 inset) The arealies gt 100 km north of the Antarctic continental shelf breakin waters gt 3000 m depth

    Samples were obtained from the clean seawater line ofthe re-supply vessel from around 3 m depth Each samplerepresented 250 mL of seawater filtered through a 25 mmdiameter polycarbonate-membrane filter with 08 microm pores(Poretics) The filter was then rinsed with two additions ofapproximately 2 mL of Milli-Q water to remove salt thenair dried and stored in a sealed container containing sil-ica gel desiccant Samples were prepared for scanning elec-tron microscope (SEM) survey by mounting each filter ontoa metal stub and sputter coating with 15 nm gold or plat-inum Only organisms possessing hard siliceous or calcare-ous shells were sufficiently well preserved through the sam-ple preparation technique that they could be identified bySEM and these included diatoms coccolithophores sili-coflagellates Pterosperma Parmales radiolarians and ar-moured dinoflagellates

    21 Phytoplankton relative abundance

    The composition of the phytoplankton community of eachsample was determined from times400 magnification imagescaptured using a JEOL JSM 840 Field Emission SEM Cell

    httpsdoiorg105194bg-17-3815-2020 Biogeosciences 17 3815ndash3835 2020

    3818 B L Greaves et al SAM influences phytoplankton in SIZ

    Figure 1 (a) Latitude and timing of samples (black filled circles) and sea ice extent at 143 E (grey solid line) (b) monthly total chlorophyll(Acker and Leptoukh 2007 GMAO 2017) across the sampled area (longitude 1357ndash1478 E) northern extent (latitude minus62 N lightgreen solid circles) and southern extent (latitudeminus645 N olive-green open circles) and (c) monthly average of daily SAM (NOAA 2017)

    Figure 2 Example of phytoplankton identification on a single SEM image representing 00348 mL of seawater Overlying letters are taxacodes for individual phytoplankton taxa considered in the analysis (listed in Table 3) codes in parenthesis are rare taxa (see text) Insetsampling area in relation to southern Australia and the Antarctic coastline with sample locations indicated as open circles

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    B L Greaves et al SAM influences phytoplankton in SIZ 3819

    numbers for each phytoplankton taxon were counted in arandom selection of captured images taken of each sam-ple Each captured image (Fig 2) represented an area of301 micromtimes 227 microm (area 0068 mm2) of each sample filterwhich was captured at a resolution of 85 pixels per microme-tre A minimum of three SEM images were assessed for eachsample with more images assessed when cell densities werelower ndash individual images were considered as incrementalincreases in the area of a sample covered and not samplingreplicates On average 387 cells were counted for each sam-ple Taxa were classified with the aid of Scott and Marchant(2005) Tomas (1997) and expert opinion Cell counts persample were converted to volume-specific abundances (cellsper mL) by dividing total counts by the number of imagesassessed multiplied by 00348 mL of seawater represented byeach captured image

    A total of 48 phytoplankton taxa were identified many tospecies level Because the diatoms Fragilariopsis curta andF cylindrus could not be reliably discriminated at the micro-scope resolution employed they were pooled into a singletaxa group Other taxa were also grouped namely Nitzschiaacicularis with N decipiens to a single group and discoidcentric diatoms of the genera Thalassiosira Actinocyclusand Porosira to another Rare species with maximum rela-tive abundance lt 2 were removed from the data prior toanalysis as they were not considered to be sufficiently abun-dant to warrant further analysis (Webb and Bryson 1972Taylor and Sjunneskog 2002 Swiło et al 2016) After pool-ing taxa and deleting rare taxa 22 taxa and taxonomic-groups (species groups of species and families) remainedto describe the composition of the phytoplankton commu-nity A total of 19 499 phytoplankton organisms were identi-fied and counted 18 878 diatoms 322 Parmales 173 coccol-ithophores 81 silicoflagellates and 45 Petasaria

    Phytoplankton abundance data were converted to relativeabundance by dividing each value by the total abundanceof the 22 taxa groups in the sample This was to alleviateany variation among samples resulting from dilution a phe-nomenon whereby the abundance of cells in surface waterscan be reduced in a matter of hours by an abrupt increase inwind speed and associated increase in the mixed layer depth(Carranza and Gille 2015) diluting near-surface cells into agreater water volume However relative abundance has thedisadvantage that blooming of one species will cause a re-duction in relative abundance of other present species whentheir absolute abundances may not have changed

    22 Environmental covariates

    Phytoplankton abundances were related to a range of envi-ronmental covariates available at the time of sampling Theseincluded the SAM sea surface temperature (SST) salinity(S) time since sea ice cover (DSSI defined below) mini-mum latitude of sea ice in the preceding winter latitude andlongitude of sample collection (LATS and LONGE respec-

    tively) the days since 1st October that a sample was collected(D) the year of sampling (Y being the year that each springndashsummer sampling season began) the time of day that a sam-ple was collected and satellite-derived total chlorophyll con-tent Macronutrient concentrations phosphate (PO4) silicate(SiO4) and nitrate+ nitrite (hereafter nitrate NOx) were in-cluded as indicators of nutrient drawdown as a proxy for phy-toplankton productivity (Arrigo et al 1999)

    We obtained daily estimates of the SAM from the USNWS Climate Prediction Center (NOAA 2017) This datasetuses the principal component method definition of the SAM(Mo 2000) rather than the simple zonal-mean normalisedpressure difference technique (Gong and Wang 1999) Weused these estimates principally because daily values werereadily available other available estimates were largely sea-sonal averages only (Ho et al 2012) Water samples for dis-solved macronutrients were collected frozen on the ship andlater analysed at the Commonwealth Scientific and IndustrialResearch Organisation in Hobart Australia using standardspectrophotometric methods (Hydes et al 2010) The vari-able DSSI was defined as the time since sea ice had meltedto 20 cover after Wright et al (2010) as determined fromdaily Special Sensor MicrowaveImager (SSMI) sea ice con-centration data distributed by the University of Hamburg(Spreen et al 2008) Total chlorophyll content was estimatedfor each sample location by estimating the total chlorophyllcontent over a 20 kmtimes 20 km area centred at each samplelocation for all available times from 31 August to 1 Mayin the year of sampling (monthly observations) (Acker andLeptoukh 2007 GMAO 2017) and interpolating betweenobservations to estimate total chlorophyll content on the datesampled (some examples are reproduced in Fig S3) By thismethod total chlorophyll was estimated for 49 of the 52 sam-ples the remainder of samples having a paucity of data whichprecluded estimation

    23 Statistical analysis

    Three statistical analyses were undertaken to explore the hy-pothesis (i) constrained analysis of principal coordinates(CAP Anderson and Willis 2003 also known as distance-based redundancy analysis Legendre and Anderson 1999)was used to estimate the influence of multiple environmentalcovariates in simultaneously explaining community compo-sition (ii) clustering techniques were used to explore similar-ities in phytoplankton community composition among sam-ples independently of environmental information to definesignificantly different groups of samples with similar phyto-plankton community composition and (iii) correlation anal-ysis was used to support observed relationships between phy-toplankton community composition and environmental co-variates

    For CAP and cluster analysis relative abundance datawere square-root-transformed to reduce possible dominanceof the analysis by a few abundant taxa The BrayndashCurtis dis-

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    3820 B L Greaves et al SAM influences phytoplankton in SIZ

    Figure 3 Variance in phytoplankton community composition explained by the SAM versus timing and length of the averaged range ofdaily SAM values Response surfaces relate the fraction of total variance in phytoplankton community composition attributable to the SAMversus the number of days in the range of the averaged daily SAM (vertical axis) and the timing of the centre of the range of the averageddaily SAM (horizontal axis) The horizontal axis is expressed as (a) the time through the calendar year of the middle of the range and (b) thenumber of days before a sample was collected to the middle of the range Three obvious maxima are identified with crosses (SAMautumnSAMspring and SAMprior)

    similarity index (Bray and Curtis 1957) was used to calcu-late the resemblance of samples based on their communitystructure The advantage of this index for the cell count datawas that similarity among samples was not strongly affectedby the absence of taxa

    CAP was applied to the BrayndashCurtis resemblance matrixto partition total variance in community composition into un-constrained and constrained components with the latter rep-resenting the variation due to the environmental covariatesCAP is an example of a constrained ordination method inwhich the typical samplendashspecies matrix of abundances (asused in redundancy analysis) is replaced with a symmetricmatrix of pairwise sample similarities The advantage of thisdistance-based approach to redundancy analysis is that anyecologically relevant distance measure may be used herewe use the BrayndashCurtis metric because it discounts jointabsences between samples when determining similarity Aforward selection strategy was used to choose the optimummodel containing the minimum subset of constraints requiredto explain the most variation in phytoplankton communitystructure (Legendre et al 2011) Linear projections of sig-nificant covariates were plotted as arrows in the ordinationdiagram indicating the direction and magnitude of environ-mental gradients that were correlated with changes in thephytoplankton community (Davidson et al 2016) The vari-ance in phytoplankton community structure (as determinedfrom the ordination) explained by each environmental co-variate was calculated according to the procedure outlined inTer Braak and Verdonschot (1995) and attributed to Dargie(1984) Taxa were added to the CAP plots as weighted site

    averages for each species thereby indicating the relative in-fluence of the fitted environmental constraints on each phy-toplankton taxa group

    Hierarchical agglomerative clustering based on averagelinkage was performed on the BrayndashCurtis resemblance ma-trix Significant differences among sample clusters were de-termined according to the similarity profile (SIMPROF) per-mutation method of Clarke et al (2008) based on α = 005and 1000 permutations Clustering can identify the presenceof significant differences between the community composi-tion of the samples but clustering cannot identify an effect ofthe SAM at least not directly since environmental covariatesare not included in the cluster analysis

    Pair-wise correlation analyses were performed using Pear-sonrsquos correlation coefficient r to explore the relationshipsamong environmental variables and between these environ-mental variables and the relative abundances of phytoplank-ton taxa (Rodgers and Nicewander 1988) Given the largenumber of pair-wise correlations considered we applied aBonferroni correction to give consideration to the family-wise error rate by setting alpha which is usually α = 005(Gibbons and Pratt 1975 Cohen 1990) to αm where mis the total number of correlations considered Recognisingthat αm may be conservative (Nakagawa 2004) we indi-cated when calculated correlations were significant at bothα lt 005 and at Bonferroni-corrected α lt 005m

    Response surfaces were used to display the variance ex-plained from individual CAP analyses according to the num-ber of days averaged and the mid-point (or lagged mid-point) of the range of days averaged for each aggregated

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    B L Greaves et al SAM influences phytoplankton in SIZ 3821

    Table 1 Variance in the community composition of 22 phytoplankton taxa groups attributable to constraining environmental covariables inthe CAP analysis

    CAP analysis Variance Covariate Variance Fraction p

    category of totalvariance

    D 061 154 lt 0001SST 057 146 lt 0001SAMautumn 052 133 lt 0001LONGE 047 119 lt 0001

    (a) Variables fit individually as SAMspring 041 103 lt 0001the only constraining covariate SAMprior 039 99 lt 0001

    DSSI 023 59 0004S 018 47 0018Y 013 34 0086LATS 010 25 0228Minimum latitude of sea ice the previous winter 006 16 0537

    Variance explained by all constraining covariables 148 375 lt 0001

    (b) Optimum Individual D 061 154 lt 0001multi-covariate constraining SAMautumn 050 126 lt 0001model covariables LONGE 021 52 lt 0001

    SAMprior 017 43 0006

    Unexplained residual 246 625 Total variance in taxa composition between samples 394 100

    SAM index These allowed identification of maxima in cor-relation between the SAM and phytoplankton communitystructure Response surfaces were derived by evaluating sep-arate CAP analyses for each combination of (i) the tempo-ral positioning of the daily-SAM averaging range and (ii) thelength of the daily-SAM averaging range In constructing theresponse surfaces the range of the averaged daily SAM wascentred on (i) each calendar day individually (1 Januaryndash31 December) through the year associated with each sam-ple and alternatively (ii) relative to the time of sampling andlagged from 1 to 365 d prior to each sample collection datein 1 d increments The length of the SAM averaging rangewas varied in 2 d increments from zero to plus and minus182 d from the centre of the range Similar response surfaceswere constructed relating the correlation between the aver-aged daily SAM and (i) total chlorophyll and (ii) [PO4]

    Data management and manipulation summary statisticscorrelation analyses and scatter plots were undertaken in Mi-crosoft Excel (2016) and R (R Core Team 2016) Clusteranalysis and SIMPROF were undertaken using the R pack-age clustsig (Whitaker and Christman 2014) CAP analyseswere conducted using the capscale function in the R packagevegan (Dixon 2003)

    3 Results

    31 The influence of the SAM on phytoplanktoncommunity composition

    CAP analysis and pairwise correlation analysis both indi-cated the presence of a relationship between the SAM andphytoplankton community composition Clustering analysisshowed there to be sufficient and systematic variation in phy-toplankton community composition between samples thatsamples could be grouped

    Empirical identification of the time between variation inthe SAM and the manifestation of this variation in the phyto-plankton community structure revealed three maxima in phy-toplankton community composition explained by the SAMThe first of the maxima was an autumn seasonal SAM in-dex (SAMautumn) which was determined to be the average of57 daily SAM estimates centred on the preceding 11 March(11 Februaryndash8 April) SAMautumn explained up to 133 of the variance in phytoplankton community composition es-timated through CAP analysis (Fig 3a Table 1a) The sec-ond of the maxima was a spring seasonal index (SAMspring)which was determined to be the average of 75 daily SAMestimates centred on 25 October (20 Septemberndash3 Decem-ber) SAMspring explained up to 103 of variance in phyto-plankton community composition (Fig 3a Table 1a) Unlikethe other maxima that were related to the time of year thethird of the maxima was timed relative to the date of sample

    httpsdoiorg105194bg-17-3815-2020 Biogeosciences 17 3815ndash3835 2020

    3822 B L Greaves et al SAM influences phytoplankton in SIZ

    Table 2 (a) Summary statistics for environmental variables (b) correlations between taxa group relative abundances and environmental vari-ables (c) correlations among environmental variables (d) correlations between macronutrient concentrations and environmental variables(e) as in (f) but involving only the 50 of samples collected latest in the springndashsummer Correlations significant at α le 005 are in italicand correlations significant after Bonferroni adjustment are also underlined (α lt 00519 for correlations among environmental variablesα lt 00520 for correlations with taxa group relative abundance)

    Environmental variables

    D SAM

    autu

    mn

    SAM

    prio

    r

    SAM

    spri

    ng

    LO

    NGE

    DSS

    I

    SST

    S Y tota

    lchl

    orop

    hyll

    (a) Statistics for environmental covariables

    Unit days index index index E days C PSU year mg mminus3

    Average 96 minus02 01 04 142 65 06 337 ndash 029Min 20 minus08 minus13 minus15 136 minus26 minus18 332 2002 007Max 151 06 20 100 148 gt 365 30 341 2012 070n 52 11 52 11 52 52 5 52 11 49Average standard error of estimate ndash 014 013 014 ndash ndash ndash ndash ndash ndash

    (b) Correlations with taxa group relative abundance

    Chaetoceros atlanticus minus015 055 057 063 020 minus001 minus020 022 013 037Chaetoceros concavicorniscurvatus 037 036 027 035 minus007 027 025 minus014 011 025Chaetoceros castracanei minus036 minus002 026 020 041 minus012 minus036 minus007 minus007 020Chaetoceros dichaeta 048 038 031 029 minus013 037 035 minus017 020 036Chaetoceros neglectus minus070 minus006 042 024 048 minus040 minus069 056 minus004 033Cylindrotheca closterium 013 009 minus010 minus003 002 032 012 002 minus011 003Dactyliosolen antarcticus 018 037 034 027 minus006 018 013 minus008 006 037Dactyliosolen tenuijunctus minus018 minus044 minus008 minus016 016 minus019 minus017 023 minus002 minus010Dictyocha speculum (silicoflagellate) minus078 minus017 030 014 068 minus041 minus075 036 minus014 017discoid centric diatoms minus057 015 006 024 052 minus011 minus057 021 minus015 021Emiliania huxleyi (haptophyte) minus028 minus038 minus042 minus038 021 012 minus025 minus001 minus037 minus024Fragilariopsis cylindruscurta 026 minus006 minus008 minus009 minus058 minus008 035 minus012 024 minus015Fragilariopsis kerguelensis 023 052 016 025 minus007 019 022 minus046 minus005 007Fragilariopsis pseudonana minus013 022 minus002 022 minus010 minus005 minus003 012 022 002Fragilariopsis rhombica 016 minus039 minus058 minus057 minus013 013 022 minus012 minus024 minus059Fragilariopsis ritscheri 011 minus010 000 minus003 minus002 002 010 minus003 003 minus001Guinardia cylindrus 009 012 minus006 minus006 005 017 010 minus003 minus002 012Nitzschia acicularisdecipiens minus047 minus045 minus029 minus031 042 minus032 minus046 009 minus022 minus019Parmales spp (chrysophyte) minus060 minus029 015 minus009 042 minus042 minus065 036 minus028 016Petasaria heterolepis minus025 minus013 minus027 minus008 015 minus017 minus025 002 minus002 minus004Pseudo-nitzschia lineola minus035 039 019 037 036 minus009 minus035 018 001 026Thalassiothrix antarctica minus016 032 012 016 015 minus011 minus011 minus019 minus015 000

    (c) Correlations among environmental variables

    SAMautumn 032SAMprior minus006 051SAMspring 004 056 083LONGE minus063 minus017 010 005DSSI 056 018 minus003 007 minus027SST 092 027 minus014 minus003 minus068 060S minus043 minus014 031 021 023 minus013 minus041Y 018 027 035 032 minus024 002 027 minus006total chlorophyll minus002 050 072 069 011 minus008 minus015 014 043

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    B L Greaves et al SAM influences phytoplankton in SIZ 3823

    Table 2 Continued

    Environmental variables

    D SAM

    autu

    mn

    SAM

    prio

    r

    SAM

    spri

    ng

    LO

    NGE

    DSS

    I

    SST

    S Y tota

    lchl

    orop

    hyll

    (d) Correlations with macronutrients (n= 51)

    [NOx ] minus 077 -039 023 004 053 minus 043 minus 072 054 minus014 012[PO4] minus 073 minus 056 minus007 minus026 062 minus 052 minus 070 039 minus013 minus010[SiO4] minus 056 minus 042 026 minus005 040 minus 049 minus 063 039 009 022

    (e) Correlations with macronutrients (n= 26 later-in-season 50 of samples)

    [NOx ] minus018 minus 058 minus005 minus025 minus023 minus019 002 027 minus017 ndash[PO4] minus013 minus 074 minus051 minus 068 009 minus031 minus001 003 minus002 ndash[SiO4] minus010 minus051 minus004 minus031 minus016 minus035 minus044 minus005 034 ndash

    Figure 4 Maxima of SAM influence on phytoplankton community composition SAMprior was determined relative to sample collection thedepicted solid line represents the average temporal location of the 97 d period and the broken lines represent the earliest and latest extent ofthe range associated with the earliest and latest samples

    collection for each sample and comprised the average of the97 daily SAM estimates centred 102 d prior to each samplecollection date It explained 99 of the variance in phy-toplankton composition (SAMprior Fig 3b Table 1a) Notethat SAMprior and SAMspring temporally overlapped to vary-ing extents across the 52 samples (Fig 4) and so were notentirely independent covariates for example a sample col-lected in the summer had previous days contributing to bothSAMprior and SAMspring

    The optimum CAP model contained four covariates thatexplained the variance in phytoplankton community com-position among samples (Table 1b) While four CAP axeswere statistically significant (p lt 005) the first two axes to-gether explained a total of 311 of the variance in phyto-plankton community composition and the third and fourthaxes together only explained a further 64 (not tabu-lated) Thus Fig 6a illustrates most of the variance explainedby the CAP analysis SAMautumn explained the most vari-ance in community composition (126 ) and SAMprior ex-plained a further 43 of variance (Table 1b) These twoSAM indices were moderately and significantly positively

    correlated (r = 051 Table 2c p lt 0001) Both showedsimilar negative correlations (Table 2b) with the relativeabundances of the small diatoms Fragilariopsis rhombica(Fig 5a) and Nitzschia acicularisdecipiens and the coc-colithophorid Emiliana huxleyi and similar positive cor-relations with the abundances of larger diatoms Chaeto-ceros atlanticus Chaetoceros dichaeta and Dactyliosolenantarcticus A further six taxa showed a correlation withSAMautumn but not SAMprior namely positive correla-tions with Chaetoceros concavicorniscurvatus Fragilari-opsis kerguelensis (Fig 5b) Pseudo-nitzschia lineola andThalassiothrix antarctica and negative correlations withDactyliosolen tenuijunctus and the Parmales Three taxashowed correlations with SAMprior but not SAMautumnnamely positive correlations with Chaetoceros neglectus andthe silicoflagellate Dictyocha speculum and a negative cor-relation with Petasaria heterolepis

    In total 15 of the 22 taxa groups showed significantpairwise correlations (p lt 005) with one or more of theSAM indices with SAMautumn being the most influential (Ta-ble 2b) showing significant correlation with 12 of the 22 taxa

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    3824 B L Greaves et al SAM influences phytoplankton in SIZ

    Table3Identifiedtaxa

    groupstaxataxacodecellscountedcellsm

    easuredaverageindividualcellvolum

    eabundance(averagem

    inimum

    andm

    aximum

    )averagerelative

    abundanceaverage

    totalvolumeaverage

    relativevolum

    eandpercentage

    ofsamples

    inw

    hicheach

    taxagroup

    was

    identified

    TaxonTaxa

    codeC

    ellsC

    ellsA

    verageA

    bundanceR

    elativeA

    verageA

    veragevolum

    eSam

    plescounted

    measured

    individualabundance

    totalfraction

    ofw

    ithtaxon

    cellvolume

    averagevolum

    etotalcellvolum

    e

    Average

    Min

    Max

    Num

    berN

    umber

    microm3

    cellsmLminus

    1cellsm

    Lminus

    1cellsm

    Lminus

    1microm

    3m

    Lminus

    1

    Chaetoceros

    atlanticusca

    356479

    131651

    0364

    22

    81382

    14

    90

    Chaetoceros

    castracaneicca

    4834

    9406

    038

    03

    18616

    04

    48

    Chaetoceros

    concavicorniscurvatuscc

    120200

    344320

    0135

    07

    78443

    14

    77

    Chaetoceros

    dichaetacd

    25631943

    491423

    02503

    13

    145999

    29

    94

    Chaetoceros

    neglectuscn

    634488

    17683

    0697

    35

    11906

    02

    81

    Cylindrotheca

    closteriumcyc

    12250

    12117

    079

    07

    410601

    77

    D

    actyliosolenantarcticus

    da277

    472(61

    899)44

    0195

    16

    1860

    68027

    98

    D

    actyliosolentenuijunctus

    dt1981

    13503828

    2967

    131599

    895

    36716

    100

    D

    ictyochaspeculum

    (silicoflagellate)ds

    8184

    492010

    069

    05

    99301

    15

    48

    discoidcentric

    diatoms

    dcx965

    12808572

    13312

    69652

    437

    55673

    100

    E

    miliania

    huxleyi(haptophyte)ehu

    17370

    6524

    0192

    08

    355201

    58

    Fragilariopsis

    cylindruscurtafcx

    39873013

    70632

    08796

    17

    44167

    09

    98

    Fragilariopsiskerguelensis

    fk1031

    40553748

    1670

    105458

    369

    49265

    98

    Fragilariopsis

    pseudonanafps

    170115

    35526

    0201

    09

    1899904

    69

    Fragilariopsis

    rhombica

    fr4542

    346936

    65829

    207022

    23359

    06

    100

    Fragilariopsisritscheri

    fri46

    19572

    70

    8602

    11

    02002

    35

    G

    uinardiacylindrus

    guc110

    8110

    40515

    079

    06

    225921

    41

    67

    Nitzschia

    acicularisdecipiensnix

    1133509

    251162

    0977

    57

    46705

    10

    98

    Parmales

    spp(chrysophyte)parm

    3222

    838

    0668

    17

    33400

    27

    Petasaria

    heterolepis(other)

    pet45

    ndash(65)

    70

    18703

    2667

    01

    6

    Pseudonitzschia

    lineolapsl

    681403

    109391

    4376

    41

    8446015

    100

    Thalassiothrix

    antarcticata

    112269

    (63000)

    130

    17206

    314

    42448

    85

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    B L Greaves et al SAM influences phytoplankton in SIZ 3825

    Figure 5 Scatter-plots (a b) examples of phytoplankton taxon relative abundance versus SAMautumn (c) LONGE of sample collectionversus D and (d) [PO4] versus SAMautumn Each figure shows r2 and p associated with the relationship A line of least-squares best fit isprovided to give an indication of trend

    groups When applying the conservative Bonferroni-adjustedα = 00025 seven taxa groups showed significant correlation(p lt 00025) with any SAM index and four with SAMautumn

    SAMprior and SAMspring represented a similar time span inthe spring immediately prior to sampling (Fig 4) and werestrongly and significantly correlated (r = 083 Table 2cp lt 0001) Samples were collected over a calendar rangeof 140 d (20 Octoberndash28 February Table 2a) and thus the97 d period represented by SAMprior varied in its positionin the calendar across the 140 d spread of the 52 samples(Fig 4) SAMprior and SAMspring also showed similar corre-lation signs with taxa group relative abundances (Table 2b)It was not possible however to determine whether the pre-season SAM influence was a spring effect or a prior-to-sampling effect and whilst both appear to be important ex-planatory terms only SAMprior was retained in the optimumCAP model (Table 1b)

    In the optimum multi-covariate CAP model D explainedthe greatest proportion of the observed variance in phyto-plankton community composition (Table 1b) D was signif-icantly correlated (p lt 00025) with SST S and DSSI andthe variable singly captured the most variation in phytoplank-ton community composition associated with seasonal suc-cession Alone it explained 154 of the total variance (Ta-

    ble 1b) with its effect on the phytoplankton community be-ing approximately orthogonal to that of the SAM (Fig 6a) Aweak positive relationship detected between SAMautumn andD indicated a weak trend of sampling later in the springndashsummer period in years with a higher autumn SAM (r =032 Table 2c p = 002) but otherwise the SAM indicesand D were un-related

    A total of 10 taxa groups showed significant correlation(p lt 005) between their relative abundance and D (Ta-ble 2b) Chaetoceros castracanei C neglectus D specu-lum E huxleyi N acicularisdecipiens Parmales P line-ola and the discoid centric diatoms showed negative relative-abundance correlations with D indicating greatest relativeabundance early in the springndashsummer while C concavicor-niscurvatus and C dichaeta showed greater relative abun-dance later in the springndashsummer A negative correlation(minus063 p lt 0001) was detected between the longitude ofindividual sample collection (LONGE) and D indicatingthat samples collected later in the springndashsummer were morelikely to have been collected towards the west in the sampledregion (Table 2c Fig 5c)

    Following cluster analysis similarity profile (SIMPROF)permutation analysis identified seven significantly differentgroups (p lt 005) with samples loosely grouped on the ba-

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    3826 B L Greaves et al SAM influences phytoplankton in SIZ

    Figure 6 (a) CAP analysis of phytoplankton community composition Dots represent individual samples with colours corresponding tosignificant clusters (Fig 6b) The 22 phytoplankton taxagroups are overlain as weighted averages of their sample scores (red abbreviationsafter Fig 2) with positions plotted with a 3-times-larger distance from the origin to more easily visualise their relationships with constrainingenvironmental variables Linear projections of the significant constraining environmental covariates appear as blue arrows the length andangle of which represent the magnitude and direction of influence of each variable on community composition The inset shows the taxalocated close to the origin diatoms fri and cyc collocating (b) Cluster analysis dendrogram of the 52 samples based on similarities inphytoplankton community structure using colour to show seven significantly different groups (numbered 1ndash7 solid lines α = 005) Samplelabels contain season and voyage (eg 0809v2b= austral springndashsummer over 2008ndash2009 voyage designation 2 sample b is the secondsample obtained from the SIZ during that voyage) SAMautumn value SAMprior value and the D value

    sis of their within-season successional maturity (D) and theSAM (Fig 6b) and demonstrated that there were signifi-cant differences between the community composition of thesamples The group structure determined by cluster analy-sis was displayed in the CAP ordination (using colour) todemonstrate that samples that clustered together were indeedclose to one another in the two-dimensional (2D) ordina-tion (Fig 6a) with their positioning further indicating theinfluences of D and the SAM on cluster groupings This lentconfidence that the 2D ordination was a reasonable approx-imation to the full high-dimensional structure As we knewthe values for the environmental covariates for each sam-ple it was possible to determine the correlation between the2D CAP solution and each environmental covariate We dis-played these correlations as a projected vector (arrow) wheredirection indicates the sign and length indicates strengthThis showed samples in clusters 3 and 4 (Fig 6b) were com-monly associated with a more positive SAM while those inclusters 5 6 and 7 were commonly associated with morenegative SAM values Samples in clusters 2 and 5 were com-

    monly collected earlier in the springndashsummer period (lowerD) while those in clusters 1 4 6 and 7 were commonly col-lected later (Fig 6)

    Other considered environmental covariates that did notsignificantly influence community composition were thetime of the day that a sample was collected and the mini-mum latitude reached by sea ice cover in the previous winter(Supplement Table S1)

    These analyses were also undertaken using phytoplanktonabsolute abundances rather than with relative abundances asreported above The analysis of absolute abundance showedsimilar temporal peaks in variance explained (SupplementFig S4) although it explained less variance (SAMautumn ex-plaining 109 SAMspring 91 and SAMprior 92 ) (Ta-ble S3) Individual taxa correlations with SAM indices (Ta-ble S4) showed a similar pattern to those estimated using rel-ative abundances (Table 2b)

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    B L Greaves et al SAM influences phytoplankton in SIZ 3827

    32 Influence of the SAM on phytoplanktonproductivity

    Two indicators of the influence of the SAM on phytoplank-ton productivity were obtained (i) the influence of the SAMon satellite-derived total chlorophyll and (ii) the influence ofthe SAM on macronutrient concentrations indicating nutri-ent drawdown associated with productivity Using the timesand locations of the 52 samples over the 11 years of ourstudy satellite-derived total chlorophyll showed positive cor-relation with all SAM indices r = 050 (p lt 0001) withSAMautumn r = 072 (p lt 0001) with SAMprior and r =069 (p lt 0001) with SAMspring (Table 2c) Peaks in thecorrelation of total chlorophyll with the SAM were evidentin the preceding autumn and spring and prior to sampling inresponse surfaces for NASA satellite total chlorophyll alongwith a peak in early winter (Fig S1) While further data arerequired to confirm this correlation the results obtained inthis study supported the presence of a positive relationshipbetween productivity and the SAM

    The observed concentrations of the macronutrients NOx PO4 and SiO4 showed significant negative correlationswith SAMautumn (r =minus039 minus056 minus042 respectively Ta-ble 2d p 0005 lt 0001 0002 respectively) The concen-trations of these nutrients showed stronger negative correla-tions with SAMautumn when the 50 of samples collectedlatest in the springndashsummer season was considered (r =minus058 minus074 minus051 Table 2e p 0002 lt 0001 0008respectively) Macronutrient concentrations were unrelatedto either SAMprior or SAMspring (Table 2d) Peaks in neg-ative correlation of the SAM on [PO4] were evident in thepreceding autumn and spring prior to sampling in responsesurfaces with the peaks being more negative when only the50 of samples collected later in the springndashsummer wereconsidered (Fig S2) The concentrations of macronutrientsalso showed expected decline through the springndashsummercorrelations between [NOx] [PO4] and [SiO4] withD wereminus077minus073 andminus056 respectively (Table 2d p lt 0001lt 0001 lt 0001 respectively)

    33 Observed occurrence and abundance

    Abundance of individual taxa groups averaged 133 cells permillilitre and ranged to a maximum of 8796 cells per mL (Ta-ble 3) Individual cell volume ranged from 8 microm3 for the Par-males spp to gt 60 000 microm3 for the diatoms Dactyliosolenantarcticus and Thalassiothrix antarctica Average relativeabundance ranged from 02 for the diatom Fragilariopsisritscheri to 17 for the combined taxa group Fragilariop-sis cylindruscurta Of the 22 taxa groups resolved in thisstudy four taxa groups were identified in all 52 samples and11 taxa groups were identified in more than 90 of samples(Table 3)

    4 Discussion

    41 The SAM and phytoplankton communitycomposition

    Our results show that the SAM shows a relationship withthe community composition of phytoplankton in the sea-sonal ice zone (SIZ) of the Southern Ocean (SO) This con-clusion was supported by a combination of three analyses(i) Permutation-based analyses of cluster structure demon-strated that the 52 samples were separable into seven statisti-cally different groups on the basis of community abundancecomposition of the 22 taxa groups (Fig 6b) and thus thatthere was variation between samples that might be explain-able with known environmental variables if clustering hadrevealed few or no clusters it would have been indicative oflevels of community variance (either high or low) unlikelyto be systematically explainable with the environmental vari-ables (ii) CAP analysis identified the SAM as a significantexplanatory variable on the structure of the phytoplanktoncommunity (Table 1b) and showed that groups identified incluster analysis were generally distinguished by the SAMand the D that a sample was collected (Fig 6) (iii) 15 ofthe 22 taxa groups resolved showed significant pairwise cor-relations (p lt 005) between relative abundance and at leastone of the three derived SAM indices (Table 2b)

    The derived SAM index with greatest influence on phy-toplankton community composition SAMautumn (Figs 3 4)explained 126 of the variance of phytoplankton commu-nity composition in the optimum multi-variable CAP model(Table 1b) SAMautumn represented the average SAM aroundthe time that sea ice was extending northward through theSIZ (Fig 1a) At this time phytoplankton productivity inthe SIZ would have declined to around 30 of its mid-summer maximum (Moore and Abbott 2000 Arrigo et al2008 Constable et al 2014) and phytoplankton would bepreparing for winter by variously producing energy stor-age products producing resting spores or cysts reducingmetabolic rate and engaging in heterotrophic consumptionfor energy (Fryxell 1989 McMinn and Martin 2013) Theformation of sea ice reduces available light by as much as999 (McMinn et al 1999) severely limiting light forphytoplankton for around half of each year at the rangeof longitude sampled latitude 64 S was covered in seaice for half the time across the sampled years (Fig 1a)Windier conditions associated with a more positive SAM inautumn may delay the consolidation of sea ice into largerfloes (Roach et al 2018) extending the phytoplankton grow-ing season and possibly increasing the relative abundanceof taxa that occur later in the springndashsummer season Thequantity of phytoplankton that survive the Antarctic winteris extremely low (McMinn and Martin 2013) and the abun-dance of taxa present and their metabolic condition whenthe autumn sea ice forms may strongly influence their vi-ability relative vigour and availability to seed the subse-

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    3828 B L Greaves et al SAM influences phytoplankton in SIZ

    quent post-winter bloom This possibility was supported bythe observation that the only two taxa groups observed tohave significantly (p lt 005) higher relative abundance laterin the springndashsummer the Chaetoceros species C dichaetaand C concavicorniscurvatus were both observed to alsoshow significantly higher relative abundances when the pre-ceding SAMautumn was more positive (Table 2b) Thus SAM-induced effects on phytoplankton in the autumn could wellinfluence the phytoplankton community structure in the fol-lowing post-winter productive season

    Extending the springndashsummer productive season by de-laying the autumn consolidation of sea ice may result inmore prolonged declines in relative abundance of taxa thatare more prolific earlier in the springndashsummer and may thusreduce the population from which the following post-winterbloom is initiated Of the eight taxa groups showing sta-tistically higher relative abundance earlier in the springndashsummer (p lt 005) three showed corresponding statisticallylower relative abundances with higher preceding SAMautumn(Emiliana huxleyi Nitzschia acicularisdecipiens and Par-males spp p lt 005 Table 2b) supporting this conjec-ture Of the remaining five taxa groups of the eight fourshowed no detectable relationship with SAMautumn and one(Pseudonitzschia lineola) showed a positive relationship

    Two other derived SAM indices were found to influencephytoplankton SAMspring and SAMprior These indices weredifficult to distinguish due to their largely overlapping timeperiods (Fig 4) and they were strongly correlated (r = 083p lt 005 Table 2c) with similar influence on taxonomicabundances (Table 2b) SAMprior was the preferred parame-ter for the multiparameter CAP model in which it explained43 of total variance Windier and stormier conditions as-sociated with a higher SAM in the months prior to sam-pling would increase nutrient input to the euphotic zone fromdeeper waters (Lovenduski and Gruber 2005) promotingproductivity whilst at the same time episodically dilutingsurface phytoplankton through deeper mixing More stormyconditions may also have brought about a faster break-upof winter sea ice promoting earlier spring phytoplanktongrowth Conversely windier conditions would also restrictstratification of the surface ocean precluding phytoplanktonbloom formation lessening productivity (Fitch and Moore2007) and reducing the abundance of early blooming taxaThis may explain the responses of Emiliania huxleyi and thecombined Nitzschia acicularisdecipiens group which bothshowed early maximum abundances (r =minus028 and minus047respectively with D p lt 005 Table 2b) and also nega-tive correlations with SAMspring and SAMprior (r =minus029to minus042 p lt 005 Table 2b) Five other taxa groups withearly maximum abundance (negative correlation with Dp lt 005) showed no detectable correlation with SAMspringand one (Pseudonitzschia lineola) showed a positive rela-tionship indicating that their abundances were determinedby environmental factors that prevail early in the season butnot those factors altered by variations in the SAM Histori-

    cally the variance in the SAM is lower in the spring quar-ter than in other quarters (NOAA 2005) perhaps explainingwhy SAMspring and SAMprior explained less variance in com-munity composition than SAMautumn

    We expected the SAM prior to sampling (SAMprior andSAMspring) would show a relationship with phytoplanktoncomposition and a lesser relationship of the SAM in thewinter is plausible because the surface of the ocean is in-sulated from atmospheric conditions by sea ice The relation-ship with the SAM the previous autumn was not expected butis also plausible as it coincides with the time when sea ice isforming and thus a critical time for phytoplankton preparingto hibernate the half-year of sea ice cover We also observeda similar relationship between SAMautumn and (i) NASAsatellite total chlorophyll and (ii) macronutrient concentra-tions across all samples as well as (iii) a stronger correla-tion with macronutrient concentrations when only the sam-ples collected in the latter half of the season were considered(Table 2c d and e respectively) We also observed maximain the autumn SAM relationship in response-surface analy-ses of the correlation between the SAM and (i) NASA satel-lite total chlorophyll and (ii) [PO4] in all samples as well as(iii) a stronger maxima with [PO4] when only the samplescollected later in the season were considered (Figs S1 andS2) Both total chlorophyll and [PO4] were observationallyindependent of the taxonomic cell counts and whilst [PO4]was estimated from parallel samples as the taxonomic analy-sis NASA satellite total chlorophyll had no material connec-tion with collected samples being linked only geographicallyand temporally and thus offers independent support for theunexpected observation that phytoplankton community com-position in the springndashsummer is related to the SAM in theprevious autumn The empirically defined SAMautumn alsoshowed significant (p lt 005) pairwise correlations with 12of the 22 taxa groups resolved (Table 2b)

    42 Effect of the SAM on phytoplankton taxa

    Nothing has been previously reported with respect to the cli-matic preferences of the majority of taxa identified in thisstudy and only 10 of the 22 taxa groups considered in ourresearch had data records in the Ocean Biogeographic In-formation System (OBIS 2020) Some of the observed taxahave been reported to show various relationships with en-vironmental factors including sea-surface temperature timethrough the season and latitude but often at the taxonomiclevel of genera rather than at a species level (Burckle et al1987 Chiba et al 2000 Waters et al 2000 Green and Sam-brotto 2006 Gomi et al 2007) We however observed dif-fering responses to environmental variables among closelyrelated taxa This was exemplified by the opposite correla-tions of Chaetoceros species C dicheata and C neglectuswith D (048 and minus070 respectively p lt 00025 Table 2b)and the opposite correlations of Fragilariopsis species Frhombica and F kerguelensis with SAMautumn (minus039 and

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    B L Greaves et al SAM influences phytoplankton in SIZ 3829

    052 respectively p lt 005 Table 2b Fig 5a b) The strongand opposite response to these variables by species belong-ing to the same genus indicates the importance of species-level observation in detecting subtle changes in pelagic phy-toplankton communities

    A third of analysed taxa comprising 7 taxa and 23 of all counted cells showed no detectable relationship withthe SAM This could be due to large errors associated withlow counts of rarer taxa because unaccounted variation wasmasking any relationship or because the taxa were insensi-tive to the SAM There is less chance of detecting relation-ships between taxa and environment variables when fewerindividuals are counted however some less represented taxadid show relationships with SAM indices (eg Emilianiahuxleyi |r|gt 038 Table 2b) Of the 22 taxa resolved 5showed no significant relationships with either the SAM orD All were comparatively scarce and together representedonly 2 of all cells counted Assessing species composi-tions across a greater fraction of each sample and thus count-ing more of the scarcer taxa may have revealed relationshipsbetween these rarer taxa and environmental variables (Nak-agawa and Cuthill 2007) Yet it remains possible that thesetaxa are actually unaffected by seasonal succession and theSAM instead responding to other environmental variablesthat were not measured as part of this study or that they re-main as persistent but relatively rare background taxa withrespect to the overall phytoplankton assemblage

    This is the first study to show a link between variationin the SAM and the composition of phytoplankton commu-nities in the SO although similar findings have been re-ported for other major climatic phenomena in other partsof the globe The climatically similar Northern HemisphereAnnular Mode (NAM) causes increased westerly winds anddeeper mixed layers at middle to high northern latitudes inits positive phase (Nehring 1998 Thompson et al 2003Kahru et al 2011) The NAM has been related to the tim-ing abundance and biomass of phytoplankton taxa at highnorthern latitudes (Nehring 1998 Belgrano et al 1999 Ot-tersen et al 2001 Blenckner and Hillebrand 2002) andto the delayed occurrence of maximum chlorophyll in theNorth Atlantic Summer (Kahru et al 2011) Similarly theEl NintildeondashSouthern Oscillation (ENSO) equatorial mode hasbeen shown to influence the distribution and abundance ofphytoplankton in the tropical oceans (Blanchot et al 1992)

    Phytoplankton are the pastures of the oceans and it is plau-sible that the climate in both autumn and spring influencethe phytoplankton community composition of phytoplank-ton and their ecological progression through the productivespringndashsummer period in the SIZ Climate change impactshave now been documented across every type of ecosystemon Earth (Scheffers et al 2016 Harris et al 2018) and thedistribution abundance phenology and productivity of phy-toplankton communities throughout the world are changingin response to warming acidifying and stratifying oceans(Hoegh-Guldberg and Bruno 2010) We have detected an

    association between variation in phytoplankton communitycomposition and variation in the SAM over a relatively brief11-year monitoring period despite all the other environmen-tal factors that elicit variability in phytoplankton communi-ties in the SIZ of the SO

    43 The effects of the SAM on productivity andbiomass

    A positive SAM has previously been shown to be associ-ated with increased standing stocks and productivity of phy-toplankton in the SIZ of the SO (Arrigo et al 2008 Boyce etal 2010 Soppa et al 2016) In the SIZ above the AntarcticDivergence nutrients are replenished from the deeper oceanthrough the unproductive winter and the levels of nutritionremaining at the end of summer integrate the total draw-down of nutrients by phytoplankton production over the en-tire springndashsummer growing season (Arrigo et al 1999) Weobserved this nutrient drawdown through the springndashsummeras the negative correlation between all macronutrient con-centrations and D (Table 2d) We also observed a nega-tive relationship between all macronutrient concentrations inthe springndashsummer and the previous SAMautumn (Table 2dFig 5d) suggesting that an elevated SAM in autumn leadsto greater productivity and thus greater nutrient drawdownduring the following springndashsummer The nutrient concen-trations at the end of the springndashsummer productive seasonwould be expected to best represent the total productivityover the season we observed that the correlation between nu-trient concentrations and SAMautumn were higher when onlythe 50 of samples collected later in the springndashsummerwere considered (Table 2e) further supporting the conjec-ture that a higher SAM in the autumn is linked with greaterproductivity through the following springndashsummer

    The observed positive relationship between total chloro-phyll and all the SAM indices (r = 05 to 072 p lt 00025Table 2c) and the presence of apparent spring and autumnmaxima in the response surfaces of the variance in totalchlorophyll explained by the SAM (Fig S1) further sup-port the conjecture that a more positive SAM is linked withgreater total chlorophyll and thus greater total productivityin the SIZ The total chlorophyll data considered were limitedto the 52 samples collected that is estimated for the timesand locations of each sample collection Estimates werecoarsely determined as interpolations of available monthlypredictions (Fig S3) and estimates could be thus obtainedfor only 49 of the 52 samples Yet there are indicators of re-liability in the sparse information the diatom Fragilariopsisrhombica is always relatively small (Table 3) and when therelative abundance of this taxon was high total chlorophyllwas lower (r =minus059 p lt 00025 Table 2b) and when therelative abundance of larger diatoms were high total chloro-phyll was also often high (eg Dactyliosolen antarcticusr = 037 p lt 005 Table 2b)

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    3830 B L Greaves et al SAM influences phytoplankton in SIZ

    44 Implications

    The SIZ is a productive region of the SO (Moore and Abbott2000) and changes to the SIZ phytoplankton communityhave potentially far-reaching implications for the ecosystemservices these organisms provide including carbon exportto the deep ocean and supporting the productivity of almostall Antarctic life Increases in the relative abundance of thelarger Chaetoceros spp diatoms would favour grazing bylarge metazooplankton especially krill (Boyd et al 1984Kawaguchi et al 1999 Moline et al 2004) which linkphytoplankton to whales seabirds seals and most higherAntarctic life forms (Smetacek 2008) Such changes wouldalso increase the efficiency of the biological pump as thelarger phytoplankton sink more rapidly than small phyto-plankton (Alldredge and Gotschalk 1989) and increasedgrazing by krill would reparcel some phytoplankton biomassinto faeces that would also sink more rapidly (Cadeacutee etal 1992) Such changes in carbon flux and trophodynam-ics would act as a negative feedback on climate change byspeeding the sequestration of carbon to the deep ocean

    The SAM is predicted to become increasingly positivein the future (Arblaster and Meehl 2006 Swart and Fyfe2012 Gillett and Fyfe 2013 Abram et al 2014 Solomonet al 2016) Our results cannot necessarily be extrapolatedto infer changes that will likely occur as the SAM contin-ues to increase as evolutionary responses can partly miti-gate adverse effects on phytoplankton of longer-term climatechange and future changes in climate are likely to imposeother co-stressors on phytoplankton inhabiting these waters(Lohbeck et al 2014 Schluumlter et al 2014 Deppeler andDavidson 2017) Our study showed that some of the vari-ation in the phytoplankton composition in the seasonal icezone was significantly related to variation in the SAM andthat the sign and magnitude of the correlation with the SAMdiffered among species

    5 Conclusions

    Statistical analyses indicated that together the autumn andspring SAM explained a higher percentage (179 ) of thevariation in phytoplankton community composition than anyvariable mostly due to the autumn SAM (up to 133 ) Intotal this exceeded the variance explained by any other vari-able even that attributable to the time of the season thatthe sample was collected (154 ) or other critical phys-ical variables such as temperature salinity and latitudeFurthermore 15 of the 22 phytoplankton taxa identified inthis study showed significant correlation with the SAM andthere were indications that a more positive SAM was relatedto increased phytoplankton productivity in the SIZ Whilethis study was limited in both timespan (11 austral springndashsummers) and the overall variance in phytoplankton compo-sition explained by all the constraining variables (375 ) it

    suggests that the phytoplankton of the SIZ are indeed sensi-tive to changes in the SAM and thus possibly responsive toclimate change

    Data availability The dataset used in this paper is available athttpsdoiorg10261795d9181f7308bd (Greaves et al 2019)

    Supplement The supplement related to this article is available on-line at httpsdoiorg105194bg-17-3815-2020-supplement

    Author contributions Author contributions BLG contributed toconceptualisation data curation formal analysis investigationmethodology software and supervision validation visualisationwriting of the original draft writing and review and editing ATDcontributed to conceptualisation funding acquisition formal anal-ysis methodology project administration resources supervisionwriting and review and editing ADF contributed to formal analy-sis methodology resources writing and review and editing JPMcontributed to formal analysis methodology software writing andreview and editing AM contributed to project administration su-pervision writing and review and editing AMcM contributed tofunding acquisition project administration resources writing andreview and editing SWM contributed to conceptualisation fund-ing acquisition formal analysis writing and review and editing

    Competing interests The authors declare that they have no conflictof interest

    Acknowledgements Sampling on Astrolabe was supported bya FrenchndashAustralian research collaboration The Institut PolaireFranccedilais Paul-Eacutemile-Victor supported access to the ship and fieldoperations The biogeochemical data collection was coordinatedby Alain Poisson and Nicolas Metzl Sorbonne Universiteacute andBronte Tilbrook CSIRO Oceans and Atmosphere Steve Rintoul(CSIRO) and Rose Morrow (LEGOS) coordinated the collection ofsalinity and temperature data The Antarctic Climate and Ecosys-tems CRC and the Integrated Marine Observing System are thankedfor supporting the operation of sensors the collection of water sam-ples and nutrient analyses reported in this study Alan Poole MattSherlock John Akl Kate Berry Lesley Clementson Brian Grif-fiths (CSIRO) Rick van den Enden Rob Johnson (AAD) and themany dedicated volunteers and shipsrsquo officers and crew are thankedfor their important contributions to the field efforts and data man-agement We thank the University of Tasmania and the AustralianAntarctic Division for the space and resources needed to undertakethis work Thanks to Nathaniel Bindoff and Simon Wotherspoon fortheir consideration of parts of the paper Thanks are due to the re-viewer Damiano Righetti for the valuable input he provided in par-ticular for pointing out ambiguities and small errors and improvingthe clarity of the paper and an anonymous reviewer for the struc-tural and theoretical considerations Total chlorophyll data used inthis paper were produced with the Giovanni online data system de-veloped and maintained by the NASA GES DISC

    Biogeosciences 17 3815ndash3835 2020 httpsdoiorg105194bg-17-3815-2020

    B L Greaves et al SAM influences phytoplankton in SIZ 3831

    Financial support This research has been supported by the Uni-versity of Tasmania (Institute of Marine and Antarctic Studies) bythe Australian Governmentrsquos Cooperative Research Centre programthrough the Antarctic Climate and Ecosystems CRC the AustralianAntarctic Division (projects 40 and 4107) and by the Australian Re-search Councilrsquos Special Research Initiative for Antarctic GatewayPartnership (project no SR140300001)

    Review statement This paper was edited by Julia Uitz and re-viewed by Damiano Righetti and one anonymous referee

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    Turner J Bracegirdle T J Phillips T Marshall G J and Hosk-ing J S An initial assessment of Antarctic sea ice extent in theCMIP5 models J Clim 26 1473ndash1484 2013

    Turner J Summerhayes C Sparrow M Mayewski P ConveyP di Prisco G Gutt J Hodgson D Speich S Worby TBo S and Klepikov A Antarctic climate change and the envi-ronment ndash 2015 update Antarctic Treaty Consultative MeetingSofia Bulgaria June 2015 IP 92 2015

    Waters R L Van Den Enden R and Marchant H J Summer mi-crobial ecology off East Antarctica (80ndash150 E) protistan com-munity structure and bacterial abundance Deep-Sea Res Pt II47 2401ndash2435 httpsdoiorg101016S0967-0645(00)00030-8 2000

    Webb T and Bryson R A Late-and postglacial climatic changein the northern Midwest USA quantitative estimates derivedfrom fossil pollen spectra by multivariate statistical analy-sis Quaternary Res 2 70ndash115 httpsdoiorg1010160033-5894(72)90005-1 1972

    Whitaker D and Christman M clustsig Significant Cluster Anal-ysis R package version 11 2014

    Wilson D L Smith Jr W O and Nelson D M Phytoplanktonbloom dynamics of the western Ross Sea ice edge ndash I Primaryproductivity and species-specific production Deep-Sea Res PtI 33 1375ndash1387 httpsdoiorg1010160198-0149(86)90041-5 1986

    Wright S W van den Enden R L Pearce I David-son A T Scott F J and Westwood K J Phyto-plankton community structure and stocks in the SouthernOcean (30ndash80 E) determined by CHEMTAX analysis ofHPLC pigment signatures Deep-Sea Res Pt II 57 758ndash778httpsdoiorg101016jdsr2200906015 2010

    httpsdoiorg105194bg-17-3815-2020 Biogeosciences 17 3815ndash3835 2020

    • Abstract
    • Introduction
      • Importance of the SIZ phytoplankton bloom
      • The Southern Annular Mode
      • The hypothesis
        • Methods
          • Phytoplankton relative abundance
          • Environmental covariates
          • Statistical analysis
            • Results
              • The influence of the SAM on phytoplankton community composition
              • Influence of the SAM on phytoplankton productivity
              • Observed occurrence and abundance
                • Discussion
                  • The SAM and phytoplankton community composition
                  • Effect of the SAM on phytoplankton taxa
                  • The effects of the SAM on productivity and biomass
                  • Implications
                    • Conclusions
                    • Data availability
                    • Supplement
                    • Author contributions
                    • Competing interests
                    • Acknowledgements
                    • Financial support
                    • Review statement
                    • References

      B L Greaves et al SAM influences phytoplankton in SIZ 3817

      Jones et al 2016) and increasing atmospheric greenhousegas concentrations (Thompson et al 2011) The long-termaverage SAM is now at its most positive level for at least thepast 1000 years (Abram et al 2014) Continuing increases inatmospheric greenhouse gases are expected to drive a furtherpositive increase in the SAM in all seasons (Arblaster andMeehl 2006 Swart and Fyfe 2012 Gillett and Fyfe 2013)despite the expected recovery in stratospheric ozone concen-trations to pre-ozone hole values by around 2065 (Son et al2009 Schiermeier 2009 Thompson et al 2011 Solomon etal 2016)

      A more positive SAM indicates the occurrence of astrengthening circumpolar vortex (Marshall 2003 Ho etal 2012) leading to stronger westerly winds and increasedstorminess at high latitudes (Hall and Visbeck 2002 Kwokand Comiso 2002 Lovenduski and Gruber 2005 Arblasterand Meehl 2006) These changes are particularly markedsouth of 60 S in the atmospheric Southern CircumpolarTrough (Hines et al 2000 Mackintosh et al 2017) a re-gion characterised by strong winds with variable direction(Taljaard 1967) Stronger winds associated with more pos-itive SAM may result in increased transport of surface wa-ter northward from the Antarctic Divergence by Ekman drift(Lovenduski and Gruber 2005 DiFiore et al 2006) poten-tially driving increased upwelling of nutrient- and carbon-rich deep ocean water at the Antarctic Divergence (Hall andVisbeck 2002) More positive SAM is also associated withreduced near-surface air temperature over the SIZ due to anincreased frequency of strong southerly winds and increasedcloud cover (Lefebvre et al 2004 Sen Gupta and England2006 Marshall 2007) Sea ice extent around the Antarcticcontinent shows zonal relationships with the SAM with pos-itive relationships between the SAM and sea ice extent inthe western Pacific and Indian sectors of the SO and nega-tive or non-existent relationships in other sectors (Kohyamaand Hartmann 2016) Wind also affects the nature of the seaice breaking up floes via wave interactions increasing flood-ing and changing pack ice density (compressing or openingup the pack) and contributing to ice formation by generatingfrazil ice (Massom and Stammerjohn 2010 Squire 2020)Lower sea-surface temperatures have been observed to lagpositive SAM events by 1 to 4 months (Lefebvre et al 2004Meredith et al 2008) and changes in the SAM may takeweeks to months to be manifested in phytoplankton commu-nities (Sen Gupta and England 2006 Meredith et al 2008)Extreme SAM events might also impact phytoplankton com-munities for multiple years (Ottersen et al 2001)

      By modulating upwelling ocean mixed depth air temper-ature and sea ice characteristics and duration it is likely thata more positive SAM will affect the composition and abun-dance of phytoplankton in the SIZ of the SO Lovenduski andGruber (2005) predicted that more positive SAM would sup-port higher phytoplankton productivity and subsequent anal-yses by Arrigo et al (2008) Boyce et al (2010) and Soppaet al (2016) have confirmed a positive relationship between

      the SAM and phytoplankton standing stocks and productivitysouth of 60 S in the SIZ

      13 The hypothesis

      Based on the predicted and observed positive relationshipsbetween the SAM and phytoplankton standing stocks andproductivity in the SIZ of the SO we hypothesised thatchanges in the SAM could also elicit changes in the compo-sition of the phytoplankton community To test this hypothe-sis we conducted a scanning electron microscopic survey ofhard-shelled phytoplankton in surface waters of the AntarcticSIZ using samples collected between October and Februaryeach springndashsummer over 11 consecutive years (2002ndash2003to 2012ndash2013) We then related the composition of thesecommunities to environmental variables including the SAM

      2 Methods

      A total of 52 surface-water samples were collected from theseasonal ice zone (SIZ) of the Southern Ocean (SO) across11 consecutive austral springndashsummers from 2002ndash2003 to2012ndash2013 The samples were collected aboard the Frenchre-supply vessel MV LrsquoAstrolabe during resupply voyagesbetween Hobart Australia and Dumont drsquoUrville Antarc-tica between 20 October and 28 February Most sampleswere collected from ice-free water although some were col-lected south of the receding ice edge (Fig 1a)

      The sampled area was in the Indian sector of the SO span-ning 270 km of latitude between 62 and 645 S and 625 kmof longitude between 136 and 148 E (Fig 2 inset) The arealies gt 100 km north of the Antarctic continental shelf breakin waters gt 3000 m depth

      Samples were obtained from the clean seawater line ofthe re-supply vessel from around 3 m depth Each samplerepresented 250 mL of seawater filtered through a 25 mmdiameter polycarbonate-membrane filter with 08 microm pores(Poretics) The filter was then rinsed with two additions ofapproximately 2 mL of Milli-Q water to remove salt thenair dried and stored in a sealed container containing sil-ica gel desiccant Samples were prepared for scanning elec-tron microscope (SEM) survey by mounting each filter ontoa metal stub and sputter coating with 15 nm gold or plat-inum Only organisms possessing hard siliceous or calcare-ous shells were sufficiently well preserved through the sam-ple preparation technique that they could be identified bySEM and these included diatoms coccolithophores sili-coflagellates Pterosperma Parmales radiolarians and ar-moured dinoflagellates

      21 Phytoplankton relative abundance

      The composition of the phytoplankton community of eachsample was determined from times400 magnification imagescaptured using a JEOL JSM 840 Field Emission SEM Cell

      httpsdoiorg105194bg-17-3815-2020 Biogeosciences 17 3815ndash3835 2020

      3818 B L Greaves et al SAM influences phytoplankton in SIZ

      Figure 1 (a) Latitude and timing of samples (black filled circles) and sea ice extent at 143 E (grey solid line) (b) monthly total chlorophyll(Acker and Leptoukh 2007 GMAO 2017) across the sampled area (longitude 1357ndash1478 E) northern extent (latitude minus62 N lightgreen solid circles) and southern extent (latitudeminus645 N olive-green open circles) and (c) monthly average of daily SAM (NOAA 2017)

      Figure 2 Example of phytoplankton identification on a single SEM image representing 00348 mL of seawater Overlying letters are taxacodes for individual phytoplankton taxa considered in the analysis (listed in Table 3) codes in parenthesis are rare taxa (see text) Insetsampling area in relation to southern Australia and the Antarctic coastline with sample locations indicated as open circles

      Biogeosciences 17 3815ndash3835 2020 httpsdoiorg105194bg-17-3815-2020

      B L Greaves et al SAM influences phytoplankton in SIZ 3819

      numbers for each phytoplankton taxon were counted in arandom selection of captured images taken of each sam-ple Each captured image (Fig 2) represented an area of301 micromtimes 227 microm (area 0068 mm2) of each sample filterwhich was captured at a resolution of 85 pixels per microme-tre A minimum of three SEM images were assessed for eachsample with more images assessed when cell densities werelower ndash individual images were considered as incrementalincreases in the area of a sample covered and not samplingreplicates On average 387 cells were counted for each sam-ple Taxa were classified with the aid of Scott and Marchant(2005) Tomas (1997) and expert opinion Cell counts persample were converted to volume-specific abundances (cellsper mL) by dividing total counts by the number of imagesassessed multiplied by 00348 mL of seawater represented byeach captured image

      A total of 48 phytoplankton taxa were identified many tospecies level Because the diatoms Fragilariopsis curta andF cylindrus could not be reliably discriminated at the micro-scope resolution employed they were pooled into a singletaxa group Other taxa were also grouped namely Nitzschiaacicularis with N decipiens to a single group and discoidcentric diatoms of the genera Thalassiosira Actinocyclusand Porosira to another Rare species with maximum rela-tive abundance lt 2 were removed from the data prior toanalysis as they were not considered to be sufficiently abun-dant to warrant further analysis (Webb and Bryson 1972Taylor and Sjunneskog 2002 Swiło et al 2016) After pool-ing taxa and deleting rare taxa 22 taxa and taxonomic-groups (species groups of species and families) remainedto describe the composition of the phytoplankton commu-nity A total of 19 499 phytoplankton organisms were identi-fied and counted 18 878 diatoms 322 Parmales 173 coccol-ithophores 81 silicoflagellates and 45 Petasaria

      Phytoplankton abundance data were converted to relativeabundance by dividing each value by the total abundanceof the 22 taxa groups in the sample This was to alleviateany variation among samples resulting from dilution a phe-nomenon whereby the abundance of cells in surface waterscan be reduced in a matter of hours by an abrupt increase inwind speed and associated increase in the mixed layer depth(Carranza and Gille 2015) diluting near-surface cells into agreater water volume However relative abundance has thedisadvantage that blooming of one species will cause a re-duction in relative abundance of other present species whentheir absolute abundances may not have changed

      22 Environmental covariates

      Phytoplankton abundances were related to a range of envi-ronmental covariates available at the time of sampling Theseincluded the SAM sea surface temperature (SST) salinity(S) time since sea ice cover (DSSI defined below) mini-mum latitude of sea ice in the preceding winter latitude andlongitude of sample collection (LATS and LONGE respec-

      tively) the days since 1st October that a sample was collected(D) the year of sampling (Y being the year that each springndashsummer sampling season began) the time of day that a sam-ple was collected and satellite-derived total chlorophyll con-tent Macronutrient concentrations phosphate (PO4) silicate(SiO4) and nitrate+ nitrite (hereafter nitrate NOx) were in-cluded as indicators of nutrient drawdown as a proxy for phy-toplankton productivity (Arrigo et al 1999)

      We obtained daily estimates of the SAM from the USNWS Climate Prediction Center (NOAA 2017) This datasetuses the principal component method definition of the SAM(Mo 2000) rather than the simple zonal-mean normalisedpressure difference technique (Gong and Wang 1999) Weused these estimates principally because daily values werereadily available other available estimates were largely sea-sonal averages only (Ho et al 2012) Water samples for dis-solved macronutrients were collected frozen on the ship andlater analysed at the Commonwealth Scientific and IndustrialResearch Organisation in Hobart Australia using standardspectrophotometric methods (Hydes et al 2010) The vari-able DSSI was defined as the time since sea ice had meltedto 20 cover after Wright et al (2010) as determined fromdaily Special Sensor MicrowaveImager (SSMI) sea ice con-centration data distributed by the University of Hamburg(Spreen et al 2008) Total chlorophyll content was estimatedfor each sample location by estimating the total chlorophyllcontent over a 20 kmtimes 20 km area centred at each samplelocation for all available times from 31 August to 1 Mayin the year of sampling (monthly observations) (Acker andLeptoukh 2007 GMAO 2017) and interpolating betweenobservations to estimate total chlorophyll content on the datesampled (some examples are reproduced in Fig S3) By thismethod total chlorophyll was estimated for 49 of the 52 sam-ples the remainder of samples having a paucity of data whichprecluded estimation

      23 Statistical analysis

      Three statistical analyses were undertaken to explore the hy-pothesis (i) constrained analysis of principal coordinates(CAP Anderson and Willis 2003 also known as distance-based redundancy analysis Legendre and Anderson 1999)was used to estimate the influence of multiple environmentalcovariates in simultaneously explaining community compo-sition (ii) clustering techniques were used to explore similar-ities in phytoplankton community composition among sam-ples independently of environmental information to definesignificantly different groups of samples with similar phyto-plankton community composition and (iii) correlation anal-ysis was used to support observed relationships between phy-toplankton community composition and environmental co-variates

      For CAP and cluster analysis relative abundance datawere square-root-transformed to reduce possible dominanceof the analysis by a few abundant taxa The BrayndashCurtis dis-

      httpsdoiorg105194bg-17-3815-2020 Biogeosciences 17 3815ndash3835 2020

      3820 B L Greaves et al SAM influences phytoplankton in SIZ

      Figure 3 Variance in phytoplankton community composition explained by the SAM versus timing and length of the averaged range ofdaily SAM values Response surfaces relate the fraction of total variance in phytoplankton community composition attributable to the SAMversus the number of days in the range of the averaged daily SAM (vertical axis) and the timing of the centre of the range of the averageddaily SAM (horizontal axis) The horizontal axis is expressed as (a) the time through the calendar year of the middle of the range and (b) thenumber of days before a sample was collected to the middle of the range Three obvious maxima are identified with crosses (SAMautumnSAMspring and SAMprior)

      similarity index (Bray and Curtis 1957) was used to calcu-late the resemblance of samples based on their communitystructure The advantage of this index for the cell count datawas that similarity among samples was not strongly affectedby the absence of taxa

      CAP was applied to the BrayndashCurtis resemblance matrixto partition total variance in community composition into un-constrained and constrained components with the latter rep-resenting the variation due to the environmental covariatesCAP is an example of a constrained ordination method inwhich the typical samplendashspecies matrix of abundances (asused in redundancy analysis) is replaced with a symmetricmatrix of pairwise sample similarities The advantage of thisdistance-based approach to redundancy analysis is that anyecologically relevant distance measure may be used herewe use the BrayndashCurtis metric because it discounts jointabsences between samples when determining similarity Aforward selection strategy was used to choose the optimummodel containing the minimum subset of constraints requiredto explain the most variation in phytoplankton communitystructure (Legendre et al 2011) Linear projections of sig-nificant covariates were plotted as arrows in the ordinationdiagram indicating the direction and magnitude of environ-mental gradients that were correlated with changes in thephytoplankton community (Davidson et al 2016) The vari-ance in phytoplankton community structure (as determinedfrom the ordination) explained by each environmental co-variate was calculated according to the procedure outlined inTer Braak and Verdonschot (1995) and attributed to Dargie(1984) Taxa were added to the CAP plots as weighted site

      averages for each species thereby indicating the relative in-fluence of the fitted environmental constraints on each phy-toplankton taxa group

      Hierarchical agglomerative clustering based on averagelinkage was performed on the BrayndashCurtis resemblance ma-trix Significant differences among sample clusters were de-termined according to the similarity profile (SIMPROF) per-mutation method of Clarke et al (2008) based on α = 005and 1000 permutations Clustering can identify the presenceof significant differences between the community composi-tion of the samples but clustering cannot identify an effect ofthe SAM at least not directly since environmental covariatesare not included in the cluster analysis

      Pair-wise correlation analyses were performed using Pear-sonrsquos correlation coefficient r to explore the relationshipsamong environmental variables and between these environ-mental variables and the relative abundances of phytoplank-ton taxa (Rodgers and Nicewander 1988) Given the largenumber of pair-wise correlations considered we applied aBonferroni correction to give consideration to the family-wise error rate by setting alpha which is usually α = 005(Gibbons and Pratt 1975 Cohen 1990) to αm where mis the total number of correlations considered Recognisingthat αm may be conservative (Nakagawa 2004) we indi-cated when calculated correlations were significant at bothα lt 005 and at Bonferroni-corrected α lt 005m

      Response surfaces were used to display the variance ex-plained from individual CAP analyses according to the num-ber of days averaged and the mid-point (or lagged mid-point) of the range of days averaged for each aggregated

      Biogeosciences 17 3815ndash3835 2020 httpsdoiorg105194bg-17-3815-2020

      B L Greaves et al SAM influences phytoplankton in SIZ 3821

      Table 1 Variance in the community composition of 22 phytoplankton taxa groups attributable to constraining environmental covariables inthe CAP analysis

      CAP analysis Variance Covariate Variance Fraction p

      category of totalvariance

      D 061 154 lt 0001SST 057 146 lt 0001SAMautumn 052 133 lt 0001LONGE 047 119 lt 0001

      (a) Variables fit individually as SAMspring 041 103 lt 0001the only constraining covariate SAMprior 039 99 lt 0001

      DSSI 023 59 0004S 018 47 0018Y 013 34 0086LATS 010 25 0228Minimum latitude of sea ice the previous winter 006 16 0537

      Variance explained by all constraining covariables 148 375 lt 0001

      (b) Optimum Individual D 061 154 lt 0001multi-covariate constraining SAMautumn 050 126 lt 0001model covariables LONGE 021 52 lt 0001

      SAMprior 017 43 0006

      Unexplained residual 246 625 Total variance in taxa composition between samples 394 100

      SAM index These allowed identification of maxima in cor-relation between the SAM and phytoplankton communitystructure Response surfaces were derived by evaluating sep-arate CAP analyses for each combination of (i) the tempo-ral positioning of the daily-SAM averaging range and (ii) thelength of the daily-SAM averaging range In constructing theresponse surfaces the range of the averaged daily SAM wascentred on (i) each calendar day individually (1 Januaryndash31 December) through the year associated with each sam-ple and alternatively (ii) relative to the time of sampling andlagged from 1 to 365 d prior to each sample collection datein 1 d increments The length of the SAM averaging rangewas varied in 2 d increments from zero to plus and minus182 d from the centre of the range Similar response surfaceswere constructed relating the correlation between the aver-aged daily SAM and (i) total chlorophyll and (ii) [PO4]

      Data management and manipulation summary statisticscorrelation analyses and scatter plots were undertaken in Mi-crosoft Excel (2016) and R (R Core Team 2016) Clusteranalysis and SIMPROF were undertaken using the R pack-age clustsig (Whitaker and Christman 2014) CAP analyseswere conducted using the capscale function in the R packagevegan (Dixon 2003)

      3 Results

      31 The influence of the SAM on phytoplanktoncommunity composition

      CAP analysis and pairwise correlation analysis both indi-cated the presence of a relationship between the SAM andphytoplankton community composition Clustering analysisshowed there to be sufficient and systematic variation in phy-toplankton community composition between samples thatsamples could be grouped

      Empirical identification of the time between variation inthe SAM and the manifestation of this variation in the phyto-plankton community structure revealed three maxima in phy-toplankton community composition explained by the SAMThe first of the maxima was an autumn seasonal SAM in-dex (SAMautumn) which was determined to be the average of57 daily SAM estimates centred on the preceding 11 March(11 Februaryndash8 April) SAMautumn explained up to 133 of the variance in phytoplankton community composition es-timated through CAP analysis (Fig 3a Table 1a) The sec-ond of the maxima was a spring seasonal index (SAMspring)which was determined to be the average of 75 daily SAMestimates centred on 25 October (20 Septemberndash3 Decem-ber) SAMspring explained up to 103 of variance in phyto-plankton community composition (Fig 3a Table 1a) Unlikethe other maxima that were related to the time of year thethird of the maxima was timed relative to the date of sample

      httpsdoiorg105194bg-17-3815-2020 Biogeosciences 17 3815ndash3835 2020

      3822 B L Greaves et al SAM influences phytoplankton in SIZ

      Table 2 (a) Summary statistics for environmental variables (b) correlations between taxa group relative abundances and environmental vari-ables (c) correlations among environmental variables (d) correlations between macronutrient concentrations and environmental variables(e) as in (f) but involving only the 50 of samples collected latest in the springndashsummer Correlations significant at α le 005 are in italicand correlations significant after Bonferroni adjustment are also underlined (α lt 00519 for correlations among environmental variablesα lt 00520 for correlations with taxa group relative abundance)

      Environmental variables

      D SAM

      autu

      mn

      SAM

      prio

      r

      SAM

      spri

      ng

      LO

      NGE

      DSS

      I

      SST

      S Y tota

      lchl

      orop

      hyll

      (a) Statistics for environmental covariables

      Unit days index index index E days C PSU year mg mminus3

      Average 96 minus02 01 04 142 65 06 337 ndash 029Min 20 minus08 minus13 minus15 136 minus26 minus18 332 2002 007Max 151 06 20 100 148 gt 365 30 341 2012 070n 52 11 52 11 52 52 5 52 11 49Average standard error of estimate ndash 014 013 014 ndash ndash ndash ndash ndash ndash

      (b) Correlations with taxa group relative abundance

      Chaetoceros atlanticus minus015 055 057 063 020 minus001 minus020 022 013 037Chaetoceros concavicorniscurvatus 037 036 027 035 minus007 027 025 minus014 011 025Chaetoceros castracanei minus036 minus002 026 020 041 minus012 minus036 minus007 minus007 020Chaetoceros dichaeta 048 038 031 029 minus013 037 035 minus017 020 036Chaetoceros neglectus minus070 minus006 042 024 048 minus040 minus069 056 minus004 033Cylindrotheca closterium 013 009 minus010 minus003 002 032 012 002 minus011 003Dactyliosolen antarcticus 018 037 034 027 minus006 018 013 minus008 006 037Dactyliosolen tenuijunctus minus018 minus044 minus008 minus016 016 minus019 minus017 023 minus002 minus010Dictyocha speculum (silicoflagellate) minus078 minus017 030 014 068 minus041 minus075 036 minus014 017discoid centric diatoms minus057 015 006 024 052 minus011 minus057 021 minus015 021Emiliania huxleyi (haptophyte) minus028 minus038 minus042 minus038 021 012 minus025 minus001 minus037 minus024Fragilariopsis cylindruscurta 026 minus006 minus008 minus009 minus058 minus008 035 minus012 024 minus015Fragilariopsis kerguelensis 023 052 016 025 minus007 019 022 minus046 minus005 007Fragilariopsis pseudonana minus013 022 minus002 022 minus010 minus005 minus003 012 022 002Fragilariopsis rhombica 016 minus039 minus058 minus057 minus013 013 022 minus012 minus024 minus059Fragilariopsis ritscheri 011 minus010 000 minus003 minus002 002 010 minus003 003 minus001Guinardia cylindrus 009 012 minus006 minus006 005 017 010 minus003 minus002 012Nitzschia acicularisdecipiens minus047 minus045 minus029 minus031 042 minus032 minus046 009 minus022 minus019Parmales spp (chrysophyte) minus060 minus029 015 minus009 042 minus042 minus065 036 minus028 016Petasaria heterolepis minus025 minus013 minus027 minus008 015 minus017 minus025 002 minus002 minus004Pseudo-nitzschia lineola minus035 039 019 037 036 minus009 minus035 018 001 026Thalassiothrix antarctica minus016 032 012 016 015 minus011 minus011 minus019 minus015 000

      (c) Correlations among environmental variables

      SAMautumn 032SAMprior minus006 051SAMspring 004 056 083LONGE minus063 minus017 010 005DSSI 056 018 minus003 007 minus027SST 092 027 minus014 minus003 minus068 060S minus043 minus014 031 021 023 minus013 minus041Y 018 027 035 032 minus024 002 027 minus006total chlorophyll minus002 050 072 069 011 minus008 minus015 014 043

      Biogeosciences 17 3815ndash3835 2020 httpsdoiorg105194bg-17-3815-2020

      B L Greaves et al SAM influences phytoplankton in SIZ 3823

      Table 2 Continued

      Environmental variables

      D SAM

      autu

      mn

      SAM

      prio

      r

      SAM

      spri

      ng

      LO

      NGE

      DSS

      I

      SST

      S Y tota

      lchl

      orop

      hyll

      (d) Correlations with macronutrients (n= 51)

      [NOx ] minus 077 -039 023 004 053 minus 043 minus 072 054 minus014 012[PO4] minus 073 minus 056 minus007 minus026 062 minus 052 minus 070 039 minus013 minus010[SiO4] minus 056 minus 042 026 minus005 040 minus 049 minus 063 039 009 022

      (e) Correlations with macronutrients (n= 26 later-in-season 50 of samples)

      [NOx ] minus018 minus 058 minus005 minus025 minus023 minus019 002 027 minus017 ndash[PO4] minus013 minus 074 minus051 minus 068 009 minus031 minus001 003 minus002 ndash[SiO4] minus010 minus051 minus004 minus031 minus016 minus035 minus044 minus005 034 ndash

      Figure 4 Maxima of SAM influence on phytoplankton community composition SAMprior was determined relative to sample collection thedepicted solid line represents the average temporal location of the 97 d period and the broken lines represent the earliest and latest extent ofthe range associated with the earliest and latest samples

      collection for each sample and comprised the average of the97 daily SAM estimates centred 102 d prior to each samplecollection date It explained 99 of the variance in phy-toplankton composition (SAMprior Fig 3b Table 1a) Notethat SAMprior and SAMspring temporally overlapped to vary-ing extents across the 52 samples (Fig 4) and so were notentirely independent covariates for example a sample col-lected in the summer had previous days contributing to bothSAMprior and SAMspring

      The optimum CAP model contained four covariates thatexplained the variance in phytoplankton community com-position among samples (Table 1b) While four CAP axeswere statistically significant (p lt 005) the first two axes to-gether explained a total of 311 of the variance in phyto-plankton community composition and the third and fourthaxes together only explained a further 64 (not tabu-lated) Thus Fig 6a illustrates most of the variance explainedby the CAP analysis SAMautumn explained the most vari-ance in community composition (126 ) and SAMprior ex-plained a further 43 of variance (Table 1b) These twoSAM indices were moderately and significantly positively

      correlated (r = 051 Table 2c p lt 0001) Both showedsimilar negative correlations (Table 2b) with the relativeabundances of the small diatoms Fragilariopsis rhombica(Fig 5a) and Nitzschia acicularisdecipiens and the coc-colithophorid Emiliana huxleyi and similar positive cor-relations with the abundances of larger diatoms Chaeto-ceros atlanticus Chaetoceros dichaeta and Dactyliosolenantarcticus A further six taxa showed a correlation withSAMautumn but not SAMprior namely positive correla-tions with Chaetoceros concavicorniscurvatus Fragilari-opsis kerguelensis (Fig 5b) Pseudo-nitzschia lineola andThalassiothrix antarctica and negative correlations withDactyliosolen tenuijunctus and the Parmales Three taxashowed correlations with SAMprior but not SAMautumnnamely positive correlations with Chaetoceros neglectus andthe silicoflagellate Dictyocha speculum and a negative cor-relation with Petasaria heterolepis

      In total 15 of the 22 taxa groups showed significantpairwise correlations (p lt 005) with one or more of theSAM indices with SAMautumn being the most influential (Ta-ble 2b) showing significant correlation with 12 of the 22 taxa

      httpsdoiorg105194bg-17-3815-2020 Biogeosciences 17 3815ndash3835 2020

      3824 B L Greaves et al SAM influences phytoplankton in SIZ

      Table3Identifiedtaxa

      groupstaxataxacodecellscountedcellsm

      easuredaverageindividualcellvolum

      eabundance(averagem

      inimum

      andm

      aximum

      )averagerelative

      abundanceaverage

      totalvolumeaverage

      relativevolum

      eandpercentage

      ofsamples

      inw

      hicheach

      taxagroup

      was

      identified

      TaxonTaxa

      codeC

      ellsC

      ellsA

      verageA

      bundanceR

      elativeA

      verageA

      veragevolum

      eSam

      plescounted

      measured

      individualabundance

      totalfraction

      ofw

      ithtaxon

      cellvolume

      averagevolum

      etotalcellvolum

      e

      Average

      Min

      Max

      Num

      berN

      umber

      microm3

      cellsmLminus

      1cellsm

      Lminus

      1cellsm

      Lminus

      1microm

      3m

      Lminus

      1

      Chaetoceros

      atlanticusca

      356479

      131651

      0364

      22

      81382

      14

      90

      Chaetoceros

      castracaneicca

      4834

      9406

      038

      03

      18616

      04

      48

      Chaetoceros

      concavicorniscurvatuscc

      120200

      344320

      0135

      07

      78443

      14

      77

      Chaetoceros

      dichaetacd

      25631943

      491423

      02503

      13

      145999

      29

      94

      Chaetoceros

      neglectuscn

      634488

      17683

      0697

      35

      11906

      02

      81

      Cylindrotheca

      closteriumcyc

      12250

      12117

      079

      07

      410601

      77

      D

      actyliosolenantarcticus

      da277

      472(61

      899)44

      0195

      16

      1860

      68027

      98

      D

      actyliosolentenuijunctus

      dt1981

      13503828

      2967

      131599

      895

      36716

      100

      D

      ictyochaspeculum

      (silicoflagellate)ds

      8184

      492010

      069

      05

      99301

      15

      48

      discoidcentric

      diatoms

      dcx965

      12808572

      13312

      69652

      437

      55673

      100

      E

      miliania

      huxleyi(haptophyte)ehu

      17370

      6524

      0192

      08

      355201

      58

      Fragilariopsis

      cylindruscurtafcx

      39873013

      70632

      08796

      17

      44167

      09

      98

      Fragilariopsiskerguelensis

      fk1031

      40553748

      1670

      105458

      369

      49265

      98

      Fragilariopsis

      pseudonanafps

      170115

      35526

      0201

      09

      1899904

      69

      Fragilariopsis

      rhombica

      fr4542

      346936

      65829

      207022

      23359

      06

      100

      Fragilariopsisritscheri

      fri46

      19572

      70

      8602

      11

      02002

      35

      G

      uinardiacylindrus

      guc110

      8110

      40515

      079

      06

      225921

      41

      67

      Nitzschia

      acicularisdecipiensnix

      1133509

      251162

      0977

      57

      46705

      10

      98

      Parmales

      spp(chrysophyte)parm

      3222

      838

      0668

      17

      33400

      27

      Petasaria

      heterolepis(other)

      pet45

      ndash(65)

      70

      18703

      2667

      01

      6

      Pseudonitzschia

      lineolapsl

      681403

      109391

      4376

      41

      8446015

      100

      Thalassiothrix

      antarcticata

      112269

      (63000)

      130

      17206

      314

      42448

      85

      Biogeosciences 17 3815ndash3835 2020 httpsdoiorg105194bg-17-3815-2020

      B L Greaves et al SAM influences phytoplankton in SIZ 3825

      Figure 5 Scatter-plots (a b) examples of phytoplankton taxon relative abundance versus SAMautumn (c) LONGE of sample collectionversus D and (d) [PO4] versus SAMautumn Each figure shows r2 and p associated with the relationship A line of least-squares best fit isprovided to give an indication of trend

      groups When applying the conservative Bonferroni-adjustedα = 00025 seven taxa groups showed significant correlation(p lt 00025) with any SAM index and four with SAMautumn

      SAMprior and SAMspring represented a similar time span inthe spring immediately prior to sampling (Fig 4) and werestrongly and significantly correlated (r = 083 Table 2cp lt 0001) Samples were collected over a calendar rangeof 140 d (20 Octoberndash28 February Table 2a) and thus the97 d period represented by SAMprior varied in its positionin the calendar across the 140 d spread of the 52 samples(Fig 4) SAMprior and SAMspring also showed similar corre-lation signs with taxa group relative abundances (Table 2b)It was not possible however to determine whether the pre-season SAM influence was a spring effect or a prior-to-sampling effect and whilst both appear to be important ex-planatory terms only SAMprior was retained in the optimumCAP model (Table 1b)

      In the optimum multi-covariate CAP model D explainedthe greatest proportion of the observed variance in phyto-plankton community composition (Table 1b) D was signif-icantly correlated (p lt 00025) with SST S and DSSI andthe variable singly captured the most variation in phytoplank-ton community composition associated with seasonal suc-cession Alone it explained 154 of the total variance (Ta-

      ble 1b) with its effect on the phytoplankton community be-ing approximately orthogonal to that of the SAM (Fig 6a) Aweak positive relationship detected between SAMautumn andD indicated a weak trend of sampling later in the springndashsummer period in years with a higher autumn SAM (r =032 Table 2c p = 002) but otherwise the SAM indicesand D were un-related

      A total of 10 taxa groups showed significant correlation(p lt 005) between their relative abundance and D (Ta-ble 2b) Chaetoceros castracanei C neglectus D specu-lum E huxleyi N acicularisdecipiens Parmales P line-ola and the discoid centric diatoms showed negative relative-abundance correlations with D indicating greatest relativeabundance early in the springndashsummer while C concavicor-niscurvatus and C dichaeta showed greater relative abun-dance later in the springndashsummer A negative correlation(minus063 p lt 0001) was detected between the longitude ofindividual sample collection (LONGE) and D indicatingthat samples collected later in the springndashsummer were morelikely to have been collected towards the west in the sampledregion (Table 2c Fig 5c)

      Following cluster analysis similarity profile (SIMPROF)permutation analysis identified seven significantly differentgroups (p lt 005) with samples loosely grouped on the ba-

      httpsdoiorg105194bg-17-3815-2020 Biogeosciences 17 3815ndash3835 2020

      3826 B L Greaves et al SAM influences phytoplankton in SIZ

      Figure 6 (a) CAP analysis of phytoplankton community composition Dots represent individual samples with colours corresponding tosignificant clusters (Fig 6b) The 22 phytoplankton taxagroups are overlain as weighted averages of their sample scores (red abbreviationsafter Fig 2) with positions plotted with a 3-times-larger distance from the origin to more easily visualise their relationships with constrainingenvironmental variables Linear projections of the significant constraining environmental covariates appear as blue arrows the length andangle of which represent the magnitude and direction of influence of each variable on community composition The inset shows the taxalocated close to the origin diatoms fri and cyc collocating (b) Cluster analysis dendrogram of the 52 samples based on similarities inphytoplankton community structure using colour to show seven significantly different groups (numbered 1ndash7 solid lines α = 005) Samplelabels contain season and voyage (eg 0809v2b= austral springndashsummer over 2008ndash2009 voyage designation 2 sample b is the secondsample obtained from the SIZ during that voyage) SAMautumn value SAMprior value and the D value

      sis of their within-season successional maturity (D) and theSAM (Fig 6b) and demonstrated that there were signifi-cant differences between the community composition of thesamples The group structure determined by cluster analy-sis was displayed in the CAP ordination (using colour) todemonstrate that samples that clustered together were indeedclose to one another in the two-dimensional (2D) ordina-tion (Fig 6a) with their positioning further indicating theinfluences of D and the SAM on cluster groupings This lentconfidence that the 2D ordination was a reasonable approx-imation to the full high-dimensional structure As we knewthe values for the environmental covariates for each sam-ple it was possible to determine the correlation between the2D CAP solution and each environmental covariate We dis-played these correlations as a projected vector (arrow) wheredirection indicates the sign and length indicates strengthThis showed samples in clusters 3 and 4 (Fig 6b) were com-monly associated with a more positive SAM while those inclusters 5 6 and 7 were commonly associated with morenegative SAM values Samples in clusters 2 and 5 were com-

      monly collected earlier in the springndashsummer period (lowerD) while those in clusters 1 4 6 and 7 were commonly col-lected later (Fig 6)

      Other considered environmental covariates that did notsignificantly influence community composition were thetime of the day that a sample was collected and the mini-mum latitude reached by sea ice cover in the previous winter(Supplement Table S1)

      These analyses were also undertaken using phytoplanktonabsolute abundances rather than with relative abundances asreported above The analysis of absolute abundance showedsimilar temporal peaks in variance explained (SupplementFig S4) although it explained less variance (SAMautumn ex-plaining 109 SAMspring 91 and SAMprior 92 ) (Ta-ble S3) Individual taxa correlations with SAM indices (Ta-ble S4) showed a similar pattern to those estimated using rel-ative abundances (Table 2b)

      Biogeosciences 17 3815ndash3835 2020 httpsdoiorg105194bg-17-3815-2020

      B L Greaves et al SAM influences phytoplankton in SIZ 3827

      32 Influence of the SAM on phytoplanktonproductivity

      Two indicators of the influence of the SAM on phytoplank-ton productivity were obtained (i) the influence of the SAMon satellite-derived total chlorophyll and (ii) the influence ofthe SAM on macronutrient concentrations indicating nutri-ent drawdown associated with productivity Using the timesand locations of the 52 samples over the 11 years of ourstudy satellite-derived total chlorophyll showed positive cor-relation with all SAM indices r = 050 (p lt 0001) withSAMautumn r = 072 (p lt 0001) with SAMprior and r =069 (p lt 0001) with SAMspring (Table 2c) Peaks in thecorrelation of total chlorophyll with the SAM were evidentin the preceding autumn and spring and prior to sampling inresponse surfaces for NASA satellite total chlorophyll alongwith a peak in early winter (Fig S1) While further data arerequired to confirm this correlation the results obtained inthis study supported the presence of a positive relationshipbetween productivity and the SAM

      The observed concentrations of the macronutrients NOx PO4 and SiO4 showed significant negative correlationswith SAMautumn (r =minus039 minus056 minus042 respectively Ta-ble 2d p 0005 lt 0001 0002 respectively) The concen-trations of these nutrients showed stronger negative correla-tions with SAMautumn when the 50 of samples collectedlatest in the springndashsummer season was considered (r =minus058 minus074 minus051 Table 2e p 0002 lt 0001 0008respectively) Macronutrient concentrations were unrelatedto either SAMprior or SAMspring (Table 2d) Peaks in neg-ative correlation of the SAM on [PO4] were evident in thepreceding autumn and spring prior to sampling in responsesurfaces with the peaks being more negative when only the50 of samples collected later in the springndashsummer wereconsidered (Fig S2) The concentrations of macronutrientsalso showed expected decline through the springndashsummercorrelations between [NOx] [PO4] and [SiO4] withD wereminus077minus073 andminus056 respectively (Table 2d p lt 0001lt 0001 lt 0001 respectively)

      33 Observed occurrence and abundance

      Abundance of individual taxa groups averaged 133 cells permillilitre and ranged to a maximum of 8796 cells per mL (Ta-ble 3) Individual cell volume ranged from 8 microm3 for the Par-males spp to gt 60 000 microm3 for the diatoms Dactyliosolenantarcticus and Thalassiothrix antarctica Average relativeabundance ranged from 02 for the diatom Fragilariopsisritscheri to 17 for the combined taxa group Fragilariop-sis cylindruscurta Of the 22 taxa groups resolved in thisstudy four taxa groups were identified in all 52 samples and11 taxa groups were identified in more than 90 of samples(Table 3)

      4 Discussion

      41 The SAM and phytoplankton communitycomposition

      Our results show that the SAM shows a relationship withthe community composition of phytoplankton in the sea-sonal ice zone (SIZ) of the Southern Ocean (SO) This con-clusion was supported by a combination of three analyses(i) Permutation-based analyses of cluster structure demon-strated that the 52 samples were separable into seven statisti-cally different groups on the basis of community abundancecomposition of the 22 taxa groups (Fig 6b) and thus thatthere was variation between samples that might be explain-able with known environmental variables if clustering hadrevealed few or no clusters it would have been indicative oflevels of community variance (either high or low) unlikelyto be systematically explainable with the environmental vari-ables (ii) CAP analysis identified the SAM as a significantexplanatory variable on the structure of the phytoplanktoncommunity (Table 1b) and showed that groups identified incluster analysis were generally distinguished by the SAMand the D that a sample was collected (Fig 6) (iii) 15 ofthe 22 taxa groups resolved showed significant pairwise cor-relations (p lt 005) between relative abundance and at leastone of the three derived SAM indices (Table 2b)

      The derived SAM index with greatest influence on phy-toplankton community composition SAMautumn (Figs 3 4)explained 126 of the variance of phytoplankton commu-nity composition in the optimum multi-variable CAP model(Table 1b) SAMautumn represented the average SAM aroundthe time that sea ice was extending northward through theSIZ (Fig 1a) At this time phytoplankton productivity inthe SIZ would have declined to around 30 of its mid-summer maximum (Moore and Abbott 2000 Arrigo et al2008 Constable et al 2014) and phytoplankton would bepreparing for winter by variously producing energy stor-age products producing resting spores or cysts reducingmetabolic rate and engaging in heterotrophic consumptionfor energy (Fryxell 1989 McMinn and Martin 2013) Theformation of sea ice reduces available light by as much as999 (McMinn et al 1999) severely limiting light forphytoplankton for around half of each year at the rangeof longitude sampled latitude 64 S was covered in seaice for half the time across the sampled years (Fig 1a)Windier conditions associated with a more positive SAM inautumn may delay the consolidation of sea ice into largerfloes (Roach et al 2018) extending the phytoplankton grow-ing season and possibly increasing the relative abundanceof taxa that occur later in the springndashsummer season Thequantity of phytoplankton that survive the Antarctic winteris extremely low (McMinn and Martin 2013) and the abun-dance of taxa present and their metabolic condition whenthe autumn sea ice forms may strongly influence their vi-ability relative vigour and availability to seed the subse-

      httpsdoiorg105194bg-17-3815-2020 Biogeosciences 17 3815ndash3835 2020

      3828 B L Greaves et al SAM influences phytoplankton in SIZ

      quent post-winter bloom This possibility was supported bythe observation that the only two taxa groups observed tohave significantly (p lt 005) higher relative abundance laterin the springndashsummer the Chaetoceros species C dichaetaand C concavicorniscurvatus were both observed to alsoshow significantly higher relative abundances when the pre-ceding SAMautumn was more positive (Table 2b) Thus SAM-induced effects on phytoplankton in the autumn could wellinfluence the phytoplankton community structure in the fol-lowing post-winter productive season

      Extending the springndashsummer productive season by de-laying the autumn consolidation of sea ice may result inmore prolonged declines in relative abundance of taxa thatare more prolific earlier in the springndashsummer and may thusreduce the population from which the following post-winterbloom is initiated Of the eight taxa groups showing sta-tistically higher relative abundance earlier in the springndashsummer (p lt 005) three showed corresponding statisticallylower relative abundances with higher preceding SAMautumn(Emiliana huxleyi Nitzschia acicularisdecipiens and Par-males spp p lt 005 Table 2b) supporting this conjec-ture Of the remaining five taxa groups of the eight fourshowed no detectable relationship with SAMautumn and one(Pseudonitzschia lineola) showed a positive relationship

      Two other derived SAM indices were found to influencephytoplankton SAMspring and SAMprior These indices weredifficult to distinguish due to their largely overlapping timeperiods (Fig 4) and they were strongly correlated (r = 083p lt 005 Table 2c) with similar influence on taxonomicabundances (Table 2b) SAMprior was the preferred parame-ter for the multiparameter CAP model in which it explained43 of total variance Windier and stormier conditions as-sociated with a higher SAM in the months prior to sam-pling would increase nutrient input to the euphotic zone fromdeeper waters (Lovenduski and Gruber 2005) promotingproductivity whilst at the same time episodically dilutingsurface phytoplankton through deeper mixing More stormyconditions may also have brought about a faster break-upof winter sea ice promoting earlier spring phytoplanktongrowth Conversely windier conditions would also restrictstratification of the surface ocean precluding phytoplanktonbloom formation lessening productivity (Fitch and Moore2007) and reducing the abundance of early blooming taxaThis may explain the responses of Emiliania huxleyi and thecombined Nitzschia acicularisdecipiens group which bothshowed early maximum abundances (r =minus028 and minus047respectively with D p lt 005 Table 2b) and also nega-tive correlations with SAMspring and SAMprior (r =minus029to minus042 p lt 005 Table 2b) Five other taxa groups withearly maximum abundance (negative correlation with Dp lt 005) showed no detectable correlation with SAMspringand one (Pseudonitzschia lineola) showed a positive rela-tionship indicating that their abundances were determinedby environmental factors that prevail early in the season butnot those factors altered by variations in the SAM Histori-

      cally the variance in the SAM is lower in the spring quar-ter than in other quarters (NOAA 2005) perhaps explainingwhy SAMspring and SAMprior explained less variance in com-munity composition than SAMautumn

      We expected the SAM prior to sampling (SAMprior andSAMspring) would show a relationship with phytoplanktoncomposition and a lesser relationship of the SAM in thewinter is plausible because the surface of the ocean is in-sulated from atmospheric conditions by sea ice The relation-ship with the SAM the previous autumn was not expected butis also plausible as it coincides with the time when sea ice isforming and thus a critical time for phytoplankton preparingto hibernate the half-year of sea ice cover We also observeda similar relationship between SAMautumn and (i) NASAsatellite total chlorophyll and (ii) macronutrient concentra-tions across all samples as well as (iii) a stronger correla-tion with macronutrient concentrations when only the sam-ples collected in the latter half of the season were considered(Table 2c d and e respectively) We also observed maximain the autumn SAM relationship in response-surface analy-ses of the correlation between the SAM and (i) NASA satel-lite total chlorophyll and (ii) [PO4] in all samples as well as(iii) a stronger maxima with [PO4] when only the samplescollected later in the season were considered (Figs S1 andS2) Both total chlorophyll and [PO4] were observationallyindependent of the taxonomic cell counts and whilst [PO4]was estimated from parallel samples as the taxonomic analy-sis NASA satellite total chlorophyll had no material connec-tion with collected samples being linked only geographicallyand temporally and thus offers independent support for theunexpected observation that phytoplankton community com-position in the springndashsummer is related to the SAM in theprevious autumn The empirically defined SAMautumn alsoshowed significant (p lt 005) pairwise correlations with 12of the 22 taxa groups resolved (Table 2b)

      42 Effect of the SAM on phytoplankton taxa

      Nothing has been previously reported with respect to the cli-matic preferences of the majority of taxa identified in thisstudy and only 10 of the 22 taxa groups considered in ourresearch had data records in the Ocean Biogeographic In-formation System (OBIS 2020) Some of the observed taxahave been reported to show various relationships with en-vironmental factors including sea-surface temperature timethrough the season and latitude but often at the taxonomiclevel of genera rather than at a species level (Burckle et al1987 Chiba et al 2000 Waters et al 2000 Green and Sam-brotto 2006 Gomi et al 2007) We however observed dif-fering responses to environmental variables among closelyrelated taxa This was exemplified by the opposite correla-tions of Chaetoceros species C dicheata and C neglectuswith D (048 and minus070 respectively p lt 00025 Table 2b)and the opposite correlations of Fragilariopsis species Frhombica and F kerguelensis with SAMautumn (minus039 and

      Biogeosciences 17 3815ndash3835 2020 httpsdoiorg105194bg-17-3815-2020

      B L Greaves et al SAM influences phytoplankton in SIZ 3829

      052 respectively p lt 005 Table 2b Fig 5a b) The strongand opposite response to these variables by species belong-ing to the same genus indicates the importance of species-level observation in detecting subtle changes in pelagic phy-toplankton communities

      A third of analysed taxa comprising 7 taxa and 23 of all counted cells showed no detectable relationship withthe SAM This could be due to large errors associated withlow counts of rarer taxa because unaccounted variation wasmasking any relationship or because the taxa were insensi-tive to the SAM There is less chance of detecting relation-ships between taxa and environment variables when fewerindividuals are counted however some less represented taxadid show relationships with SAM indices (eg Emilianiahuxleyi |r|gt 038 Table 2b) Of the 22 taxa resolved 5showed no significant relationships with either the SAM orD All were comparatively scarce and together representedonly 2 of all cells counted Assessing species composi-tions across a greater fraction of each sample and thus count-ing more of the scarcer taxa may have revealed relationshipsbetween these rarer taxa and environmental variables (Nak-agawa and Cuthill 2007) Yet it remains possible that thesetaxa are actually unaffected by seasonal succession and theSAM instead responding to other environmental variablesthat were not measured as part of this study or that they re-main as persistent but relatively rare background taxa withrespect to the overall phytoplankton assemblage

      This is the first study to show a link between variationin the SAM and the composition of phytoplankton commu-nities in the SO although similar findings have been re-ported for other major climatic phenomena in other partsof the globe The climatically similar Northern HemisphereAnnular Mode (NAM) causes increased westerly winds anddeeper mixed layers at middle to high northern latitudes inits positive phase (Nehring 1998 Thompson et al 2003Kahru et al 2011) The NAM has been related to the tim-ing abundance and biomass of phytoplankton taxa at highnorthern latitudes (Nehring 1998 Belgrano et al 1999 Ot-tersen et al 2001 Blenckner and Hillebrand 2002) andto the delayed occurrence of maximum chlorophyll in theNorth Atlantic Summer (Kahru et al 2011) Similarly theEl NintildeondashSouthern Oscillation (ENSO) equatorial mode hasbeen shown to influence the distribution and abundance ofphytoplankton in the tropical oceans (Blanchot et al 1992)

      Phytoplankton are the pastures of the oceans and it is plau-sible that the climate in both autumn and spring influencethe phytoplankton community composition of phytoplank-ton and their ecological progression through the productivespringndashsummer period in the SIZ Climate change impactshave now been documented across every type of ecosystemon Earth (Scheffers et al 2016 Harris et al 2018) and thedistribution abundance phenology and productivity of phy-toplankton communities throughout the world are changingin response to warming acidifying and stratifying oceans(Hoegh-Guldberg and Bruno 2010) We have detected an

      association between variation in phytoplankton communitycomposition and variation in the SAM over a relatively brief11-year monitoring period despite all the other environmen-tal factors that elicit variability in phytoplankton communi-ties in the SIZ of the SO

      43 The effects of the SAM on productivity andbiomass

      A positive SAM has previously been shown to be associ-ated with increased standing stocks and productivity of phy-toplankton in the SIZ of the SO (Arrigo et al 2008 Boyce etal 2010 Soppa et al 2016) In the SIZ above the AntarcticDivergence nutrients are replenished from the deeper oceanthrough the unproductive winter and the levels of nutritionremaining at the end of summer integrate the total draw-down of nutrients by phytoplankton production over the en-tire springndashsummer growing season (Arrigo et al 1999) Weobserved this nutrient drawdown through the springndashsummeras the negative correlation between all macronutrient con-centrations and D (Table 2d) We also observed a nega-tive relationship between all macronutrient concentrations inthe springndashsummer and the previous SAMautumn (Table 2dFig 5d) suggesting that an elevated SAM in autumn leadsto greater productivity and thus greater nutrient drawdownduring the following springndashsummer The nutrient concen-trations at the end of the springndashsummer productive seasonwould be expected to best represent the total productivityover the season we observed that the correlation between nu-trient concentrations and SAMautumn were higher when onlythe 50 of samples collected later in the springndashsummerwere considered (Table 2e) further supporting the conjec-ture that a higher SAM in the autumn is linked with greaterproductivity through the following springndashsummer

      The observed positive relationship between total chloro-phyll and all the SAM indices (r = 05 to 072 p lt 00025Table 2c) and the presence of apparent spring and autumnmaxima in the response surfaces of the variance in totalchlorophyll explained by the SAM (Fig S1) further sup-port the conjecture that a more positive SAM is linked withgreater total chlorophyll and thus greater total productivityin the SIZ The total chlorophyll data considered were limitedto the 52 samples collected that is estimated for the timesand locations of each sample collection Estimates werecoarsely determined as interpolations of available monthlypredictions (Fig S3) and estimates could be thus obtainedfor only 49 of the 52 samples Yet there are indicators of re-liability in the sparse information the diatom Fragilariopsisrhombica is always relatively small (Table 3) and when therelative abundance of this taxon was high total chlorophyllwas lower (r =minus059 p lt 00025 Table 2b) and when therelative abundance of larger diatoms were high total chloro-phyll was also often high (eg Dactyliosolen antarcticusr = 037 p lt 005 Table 2b)

      httpsdoiorg105194bg-17-3815-2020 Biogeosciences 17 3815ndash3835 2020

      3830 B L Greaves et al SAM influences phytoplankton in SIZ

      44 Implications

      The SIZ is a productive region of the SO (Moore and Abbott2000) and changes to the SIZ phytoplankton communityhave potentially far-reaching implications for the ecosystemservices these organisms provide including carbon exportto the deep ocean and supporting the productivity of almostall Antarctic life Increases in the relative abundance of thelarger Chaetoceros spp diatoms would favour grazing bylarge metazooplankton especially krill (Boyd et al 1984Kawaguchi et al 1999 Moline et al 2004) which linkphytoplankton to whales seabirds seals and most higherAntarctic life forms (Smetacek 2008) Such changes wouldalso increase the efficiency of the biological pump as thelarger phytoplankton sink more rapidly than small phyto-plankton (Alldredge and Gotschalk 1989) and increasedgrazing by krill would reparcel some phytoplankton biomassinto faeces that would also sink more rapidly (Cadeacutee etal 1992) Such changes in carbon flux and trophodynam-ics would act as a negative feedback on climate change byspeeding the sequestration of carbon to the deep ocean

      The SAM is predicted to become increasingly positivein the future (Arblaster and Meehl 2006 Swart and Fyfe2012 Gillett and Fyfe 2013 Abram et al 2014 Solomonet al 2016) Our results cannot necessarily be extrapolatedto infer changes that will likely occur as the SAM contin-ues to increase as evolutionary responses can partly miti-gate adverse effects on phytoplankton of longer-term climatechange and future changes in climate are likely to imposeother co-stressors on phytoplankton inhabiting these waters(Lohbeck et al 2014 Schluumlter et al 2014 Deppeler andDavidson 2017) Our study showed that some of the vari-ation in the phytoplankton composition in the seasonal icezone was significantly related to variation in the SAM andthat the sign and magnitude of the correlation with the SAMdiffered among species

      5 Conclusions

      Statistical analyses indicated that together the autumn andspring SAM explained a higher percentage (179 ) of thevariation in phytoplankton community composition than anyvariable mostly due to the autumn SAM (up to 133 ) Intotal this exceeded the variance explained by any other vari-able even that attributable to the time of the season thatthe sample was collected (154 ) or other critical phys-ical variables such as temperature salinity and latitudeFurthermore 15 of the 22 phytoplankton taxa identified inthis study showed significant correlation with the SAM andthere were indications that a more positive SAM was relatedto increased phytoplankton productivity in the SIZ Whilethis study was limited in both timespan (11 austral springndashsummers) and the overall variance in phytoplankton compo-sition explained by all the constraining variables (375 ) it

      suggests that the phytoplankton of the SIZ are indeed sensi-tive to changes in the SAM and thus possibly responsive toclimate change

      Data availability The dataset used in this paper is available athttpsdoiorg10261795d9181f7308bd (Greaves et al 2019)

      Supplement The supplement related to this article is available on-line at httpsdoiorg105194bg-17-3815-2020-supplement

      Author contributions Author contributions BLG contributed toconceptualisation data curation formal analysis investigationmethodology software and supervision validation visualisationwriting of the original draft writing and review and editing ATDcontributed to conceptualisation funding acquisition formal anal-ysis methodology project administration resources supervisionwriting and review and editing ADF contributed to formal analy-sis methodology resources writing and review and editing JPMcontributed to formal analysis methodology software writing andreview and editing AM contributed to project administration su-pervision writing and review and editing AMcM contributed tofunding acquisition project administration resources writing andreview and editing SWM contributed to conceptualisation fund-ing acquisition formal analysis writing and review and editing

      Competing interests The authors declare that they have no conflictof interest

      Acknowledgements Sampling on Astrolabe was supported bya FrenchndashAustralian research collaboration The Institut PolaireFranccedilais Paul-Eacutemile-Victor supported access to the ship and fieldoperations The biogeochemical data collection was coordinatedby Alain Poisson and Nicolas Metzl Sorbonne Universiteacute andBronte Tilbrook CSIRO Oceans and Atmosphere Steve Rintoul(CSIRO) and Rose Morrow (LEGOS) coordinated the collection ofsalinity and temperature data The Antarctic Climate and Ecosys-tems CRC and the Integrated Marine Observing System are thankedfor supporting the operation of sensors the collection of water sam-ples and nutrient analyses reported in this study Alan Poole MattSherlock John Akl Kate Berry Lesley Clementson Brian Grif-fiths (CSIRO) Rick van den Enden Rob Johnson (AAD) and themany dedicated volunteers and shipsrsquo officers and crew are thankedfor their important contributions to the field efforts and data man-agement We thank the University of Tasmania and the AustralianAntarctic Division for the space and resources needed to undertakethis work Thanks to Nathaniel Bindoff and Simon Wotherspoon fortheir consideration of parts of the paper Thanks are due to the re-viewer Damiano Righetti for the valuable input he provided in par-ticular for pointing out ambiguities and small errors and improvingthe clarity of the paper and an anonymous reviewer for the struc-tural and theoretical considerations Total chlorophyll data used inthis paper were produced with the Giovanni online data system de-veloped and maintained by the NASA GES DISC

      Biogeosciences 17 3815ndash3835 2020 httpsdoiorg105194bg-17-3815-2020

      B L Greaves et al SAM influences phytoplankton in SIZ 3831

      Financial support This research has been supported by the Uni-versity of Tasmania (Institute of Marine and Antarctic Studies) bythe Australian Governmentrsquos Cooperative Research Centre programthrough the Antarctic Climate and Ecosystems CRC the AustralianAntarctic Division (projects 40 and 4107) and by the Australian Re-search Councilrsquos Special Research Initiative for Antarctic GatewayPartnership (project no SR140300001)

      Review statement This paper was edited by Julia Uitz and re-viewed by Damiano Righetti and one anonymous referee

      References

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      Acker J G and Leptoukh G Online analysis enhances use ofNASA earth science data Eos Transactions American Geophys-ical Union 88 14ndash17 https1010292007EO020003 2007

      Alldredge A L and Gotschalk C C Direct observations of themass flocculation of diatom blooms characteristics settling ve-locities and formation of diatom aggregates Deep-Sea Res PtI 36 159ndash171 httpsdoiorg1010160198-0149(89)90131-31989

      Anderson M J and Willis T J Canonical analysis of prin-cipal coordinates a useful method of constrained ordinationfor ecology Ecology 84 511ndash525 httpsdoiorg1018900012-9658(2003)084[0511CAOPCA]20CO2 2003

      Arblaster J M and Meehl G A Contributions of external forc-ings to southern annular mode trends J Clim 19 2896ndash2905httpsdoiorg101175JCLI37741 2006

      Arndt JE Schenke HW Jakobsson M Nitsche FO Buys GGoleby B Rebesco M Bohoyo F Hong J Black J andGreku R The International Bathymetric Chart of the South-ern Ocean (IBCSO) Version 10 ndash A new bathymetric compila-tion covering circum-Antarctic waters Geophys Res Lett 403111ndash3117 httpsdoiorg101002grl50413 2013

      Arrigo K R Robinson D H Worthen D Dunbar R BDiTullio G R VanWoert M and Lizotte M P Phyto-plankton Community Structure and the Drawdown of Nutri-ents and CO2 in the Southern Ocean Science 283 365ndash367httpsdoiorg101126science2835400365 1999

      Arrigo K R van Dijken G L and Bushinsky SPrimary production in the Southern Ocean 1997ndash2006 J Geophys Res-Ocean 113 1997ndash2006httpsdoiorg1010292007JC004551 2008

      Belgrano A Lindahl O and Hernroth B North Atlantic Oscil-lation primary productivity and toxic phytoplankton in the Gull-mar Fjord Sweden (1985ndash1996) P Roy Soc B 266 425ndash430httpsdoiorg101098rspb19990655 1999

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      Chiba S Hirawake T Ushio S Horimoto N Satoh R Naka-jima Y Ishimaru T and Yamaguchi Y An overview of thebiologicaloceanographic survey by the RTV Umitaka-Maru IIIoff Adelie Land Antarctica in JanuaryndashFebruary 1996 Deep-Sea Res Pt II 47 2589ndash2613 httpsdoiorg101016S0967-0645(00)00037-0 2000

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      Greaves B L Davidson A T and Fraser A D The SouthernAnnular Mode (SAM) influences phytoplankton communities inthe seasonal ice zone of the Southern Ocean Ver 1 Australian

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      Hall A and Visbeck M Synchronous variabil-ity in the Southern Hemisphere atmosphere seaice and ocean resulting from the annular mode JClim 15 3043ndash3057 httpsdoiorg1011751520-0442(2002)015lt3043SVITSHgt20CO2 2002

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      Kwok R and Comiso J C Southern Ocean climate andsea ice anomalies associated with the Southern Oscilla-tion J Clim 15 487ndash501 httpsdoiorg1011751520-0442(2002)015lt0487SOCASIgt20CO2 2002

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      Lefebvre W Goosse H Timmermann R and FichefetT Influence of the Southern Annular Mode on the seaice-ocean system J Geophys Res-Ocean 109 1ndash12httpsdoiorg1010292004JC002403 2004

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      Lohbeck K T Riebesell U and Reusch T B H Gene expres-sion changes in the coccolithophore Emiliania huxleyi after 500generations of selection to ocean acidification P Roy Soc B281 1ndash7 httpsdoiorg101098rspb20140003 2014

      Lovenduski N S Gruber N Doney S C and Lima I D En-hanced CO2 outgassing in the Southern Ocean from a positivephase of the Southern Annular Mode Global Biogeochem Cy21 1ndash14 httpsdoiorg1010292006GB002900 2007

      Lovenduski N S and Gruber N Impact of the Southern AnnularMode on Southern Ocean circulation and biology Geophys ResLett 32 1ndash4 httpsdoiorg1010292005GL022727 2005

      Mackas D L Does blending of chlorophylldata bias temporal trend Nature 472 E4ndashE5httpsdoiorg101038nature09951 2011

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      Marshall G J Trends in the Southern Annu-lar Mode from Observations and Reanalyses JClim 16 4134ndash4143 httpsdoiorg1011751520-0442(2003)016lt4134TITSAMgt20CO2 2003

      Marshall G J Half-century seasonal relationships between theSouthern Annular mode and Antarctic temperatures Int J Cli-matol 27 373ndash383 httpsdoiorg101002joc1407 2007

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      Massom R A and Stammerjohn S E Antarctic sea ice changeand variability ndash Physical and ecological implications Polar Sci4 149ndash186 httpsdoiorg101016jpolar201005001 2010

      McMinn A Ashworth C and Ryan K Growth and Productivityof Antarctic Sea Ice Algae under PAR and UV Irradiances BotMar 42 401ndash407 httpsdoiorg101515BOT1999046 1999

      McMinn A and Martin A Dark survival in awarming world P Roy Soc B 280 20122909httpsdoiorg101098rspb20122909 2013

      Meredith M P Murphy E J Hawker E J King JC and Wallace M I On the interannual variability ofocean temperatures around South Georgia Southern OceanForcing by El NintildeoSouthern Oscillation and the South-ern Annular Mode Deep-Sea Res Pt II 55 2007ndash2022httpsdoiorg101016jdsr2200805020 2008

      Mo K C Relationships between low-frequency variability inthe Southern Hemisphere and sea surface temperature anoma-lies J Clim 13 3599ndash3610 httpsdoiorg1011751520-0442(2000)013lt3599rblfvigt20co2 2000

      Moline M A Claustre H Frazer T K Schofield O andVernet M Alteration of the food web along the Antarc-tic Peninsula in response to a regional warming trend GlobChange Biol 10 1973ndash1980 httpsdoiorg101111j1365-2486200400825x 2004

      Moore J K and Abbott M R Phytoplankton chloro-phyll distributions and primary production in the South-ern Ocean J Geophys Res-Ocean 105 28709ndash28722httpsdoiorg1010291999JC000043 2000

      Nakagawa S A farewell to Bonferroni the problems of low sta-tistical power and publication bias Behav Ecol 15 1044ndash1045httpsdoiorg101093behecoarh107 2004

      Nakagawa S and Cuthill I C Effect size confidence inter-val and statistical significance a practical guide for biolo-gists Biol Rev 82 591ndash605 httpsdoiorg101111j1469-185X200700027x 2007

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      NOAA Teleconnection Pattern Calculation ProceduresClimate Prediction Center Internet Team available athttpswwwcpcncepnoaagovproductsprecipCWlinkdaily_ao_indexhistorymethodshtmlvar (last access 15 June 2017)2005

      NOAA NCEP-DOE Reanalysis 2 data provided by theNOAAOARESRL PSD Boulder Colorado USA available athttpswwwcpcncepnoaagovproductsprecipCWlinkENSOverfnewaaoshtml last access 25 June 2017

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      3834 B L Greaves et al SAM influences phytoplankton in SIZ

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      R Core Team R A Language and Environment for Statistical Com-puting R Foundation for Statistical Computing Vienna Austria2016

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      Sen Gupta A and England M H Coupled oceanndashatmospherendashiceresponse to variations in the Southern Annular Mode J Clim19 4457ndash4486 httpsdoiorg101175JCLI38431 2006

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      Smetacek V Are declining krill stocks a result of global warmingor of the decimation of the whales in Impacts of global warmingon polar systems Fundacioacuten BBVA edited by Duarte C MBilbao 47ndash83 2008

      Solomon S Ivy D J Kinnison D Mills M J Neely R R andSchmidt A Emergence of healing in the Antarctic ozone layerScience 353 269ndash274 httpsdoiorg101126scienceaae00612016

      Son S W Tandon N F Polvani L M and Waugh D W Ozonehole and Southern Hemisphere climate change Geophys ResLett 36 1ndash5 httpsdoiorg1010292009GL038671 2009

      Soppa M Voumllker C and Bracher A Diatom Phenol-ogy in the Southern Ocean Mean Patterns Trends andthe Role of Climate Oscillations Remote Sens 8 1ndash7httpsdoiorg103390rs8050420 2016

      Spreen G Kaleschke L and Heygster G Sea ice remote sensingusing AMSR-E 89-GHz channels J Geophys Res-Ocean 113C02S03 httpsdoiorg1010292005JC003384 2008

      Squire V A Ocean wave interactions with sea icea reappraisal Annu Rev Fluid Mech 52 37ndash60httpsdoiorg101146annurev-fluid-010719-060301 2020

      Steinacher M Joos F Froumllicher T L Bopp L Cadule PCocco V Doney S C Gehlen M Lindsay K Moore J KSchneider B and Segschneider J Projected 21st century de-crease in marine productivity a multi-model analysis Biogeo-sciences 7 979ndash1005 httpsdoiorg105194bg-7-979-20102010

      Swart N C and Fyfe J C Observed and simulated changes inthe Southern Hemisphere surface westerly wind-stress GeophysRes Lett 39 1ndash6 httpsdoiorg1010292012GL0528102012

      Swart N C Fyfe J C Gillett N and Marshall G J Compar-ing Trends in the Southern Annular Mode and Surface WesterlyJet J Clim 28 8840ndash8859 httpsdoiorg101175JCLI-D-15-03341 2015

      Swiło M Majewski W Minzoni R T and Ander-son J B Diatom assemblages from coastal settingsof West Antarctica Mar Micropaleontol 125 95ndash109httpsdoiorg101016jmarmicro201604001 2016

      Takahashi T Sutherland S C Wanninkhof R Sweeney CFeely R A Chipman D W Hales B Friederich G ChavezF Sabine C Watson A Bakker D C E Schuster U MetzlN Yoshikawa-Inoue H Ishii M Midorikawa T Nojiri YKoumlrtzinger A Steinhoff T Hoppema M Olafsson J Arnar-son T S Tilbrook B Johannessen T Olsen A Bellerby RWong C S Delille B Bates N R and de Baar H J W Cli-matological mean and decadal change in surface ocean pCO2and net seandashair CO2 flux over the global oceans Deep-Sea ResPt II 56 554ndash577 httpsdoiorg101016jdsr22008120092009

      Taljaard J J Development Distribution and Move-ment of Cyclones and Anticyclones in the South-ern Hemisphere During the IGY J Appl Me-teorol 6 973ndash987 httpsdoiorg1011751520-0450(1967)006lt0973DDAMOCgt20CO2 1967

      Taylor F and Sjunneskog C Postglacial marine diatom recordof the Palmer Deep Antarctic Peninsula (ODP Leg 178 Site1098) 2 Diatom assemblages Paleoceanography 17 1ndash12httpsdoiorg1010292000PA000564 2002

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      B L Greaves et al SAM influences phytoplankton in SIZ 3835

      Ter Braak C J and Verdonschot P F Canonical correspondenceanalysis and related multivariate methods in aquatic ecologyAquat Sci 57 255ndash289 httpsdoiorg101007BF008774301995

      Thompson D W Lee S and Baldwin M P Atmospheric pro-cesses governing the northern hemisphere annular modeNorthAtlantic oscillation Geoph Monog Series 134 81ndash112 2003

      Thompson D W Solomon S Kushner P J England M HGrise K M and Karoly D J Signatures of the Antarcticozone hole in Southern Hemisphere surface climate change NatGeosci 4 741ndash749 2011

      Thompson D W J and Solomon S Interpretation of RecentSouthern Hemisphere Climate Change Science 296 895ndash899httpsdoiorg101126science1069270 2002

      Tomas C R (Ed) Identifying marine phytoplankton Academicpress San Diego California 858 pp 1997

      Turner J Bracegirdle T J Phillips T Marshall G J and Hosk-ing J S An initial assessment of Antarctic sea ice extent in theCMIP5 models J Clim 26 1473ndash1484 2013

      Turner J Summerhayes C Sparrow M Mayewski P ConveyP di Prisco G Gutt J Hodgson D Speich S Worby TBo S and Klepikov A Antarctic climate change and the envi-ronment ndash 2015 update Antarctic Treaty Consultative MeetingSofia Bulgaria June 2015 IP 92 2015

      Waters R L Van Den Enden R and Marchant H J Summer mi-crobial ecology off East Antarctica (80ndash150 E) protistan com-munity structure and bacterial abundance Deep-Sea Res Pt II47 2401ndash2435 httpsdoiorg101016S0967-0645(00)00030-8 2000

      Webb T and Bryson R A Late-and postglacial climatic changein the northern Midwest USA quantitative estimates derivedfrom fossil pollen spectra by multivariate statistical analy-sis Quaternary Res 2 70ndash115 httpsdoiorg1010160033-5894(72)90005-1 1972

      Whitaker D and Christman M clustsig Significant Cluster Anal-ysis R package version 11 2014

      Wilson D L Smith Jr W O and Nelson D M Phytoplanktonbloom dynamics of the western Ross Sea ice edge ndash I Primaryproductivity and species-specific production Deep-Sea Res PtI 33 1375ndash1387 httpsdoiorg1010160198-0149(86)90041-5 1986

      Wright S W van den Enden R L Pearce I David-son A T Scott F J and Westwood K J Phyto-plankton community structure and stocks in the SouthernOcean (30ndash80 E) determined by CHEMTAX analysis ofHPLC pigment signatures Deep-Sea Res Pt II 57 758ndash778httpsdoiorg101016jdsr2200906015 2010

      httpsdoiorg105194bg-17-3815-2020 Biogeosciences 17 3815ndash3835 2020

      • Abstract
      • Introduction
        • Importance of the SIZ phytoplankton bloom
        • The Southern Annular Mode
        • The hypothesis
          • Methods
            • Phytoplankton relative abundance
            • Environmental covariates
            • Statistical analysis
              • Results
                • The influence of the SAM on phytoplankton community composition
                • Influence of the SAM on phytoplankton productivity
                • Observed occurrence and abundance
                  • Discussion
                    • The SAM and phytoplankton community composition
                    • Effect of the SAM on phytoplankton taxa
                    • The effects of the SAM on productivity and biomass
                    • Implications
                      • Conclusions
                      • Data availability
                      • Supplement
                      • Author contributions
                      • Competing interests
                      • Acknowledgements
                      • Financial support
                      • Review statement
                      • References

        3818 B L Greaves et al SAM influences phytoplankton in SIZ

        Figure 1 (a) Latitude and timing of samples (black filled circles) and sea ice extent at 143 E (grey solid line) (b) monthly total chlorophyll(Acker and Leptoukh 2007 GMAO 2017) across the sampled area (longitude 1357ndash1478 E) northern extent (latitude minus62 N lightgreen solid circles) and southern extent (latitudeminus645 N olive-green open circles) and (c) monthly average of daily SAM (NOAA 2017)

        Figure 2 Example of phytoplankton identification on a single SEM image representing 00348 mL of seawater Overlying letters are taxacodes for individual phytoplankton taxa considered in the analysis (listed in Table 3) codes in parenthesis are rare taxa (see text) Insetsampling area in relation to southern Australia and the Antarctic coastline with sample locations indicated as open circles

        Biogeosciences 17 3815ndash3835 2020 httpsdoiorg105194bg-17-3815-2020

        B L Greaves et al SAM influences phytoplankton in SIZ 3819

        numbers for each phytoplankton taxon were counted in arandom selection of captured images taken of each sam-ple Each captured image (Fig 2) represented an area of301 micromtimes 227 microm (area 0068 mm2) of each sample filterwhich was captured at a resolution of 85 pixels per microme-tre A minimum of three SEM images were assessed for eachsample with more images assessed when cell densities werelower ndash individual images were considered as incrementalincreases in the area of a sample covered and not samplingreplicates On average 387 cells were counted for each sam-ple Taxa were classified with the aid of Scott and Marchant(2005) Tomas (1997) and expert opinion Cell counts persample were converted to volume-specific abundances (cellsper mL) by dividing total counts by the number of imagesassessed multiplied by 00348 mL of seawater represented byeach captured image

        A total of 48 phytoplankton taxa were identified many tospecies level Because the diatoms Fragilariopsis curta andF cylindrus could not be reliably discriminated at the micro-scope resolution employed they were pooled into a singletaxa group Other taxa were also grouped namely Nitzschiaacicularis with N decipiens to a single group and discoidcentric diatoms of the genera Thalassiosira Actinocyclusand Porosira to another Rare species with maximum rela-tive abundance lt 2 were removed from the data prior toanalysis as they were not considered to be sufficiently abun-dant to warrant further analysis (Webb and Bryson 1972Taylor and Sjunneskog 2002 Swiło et al 2016) After pool-ing taxa and deleting rare taxa 22 taxa and taxonomic-groups (species groups of species and families) remainedto describe the composition of the phytoplankton commu-nity A total of 19 499 phytoplankton organisms were identi-fied and counted 18 878 diatoms 322 Parmales 173 coccol-ithophores 81 silicoflagellates and 45 Petasaria

        Phytoplankton abundance data were converted to relativeabundance by dividing each value by the total abundanceof the 22 taxa groups in the sample This was to alleviateany variation among samples resulting from dilution a phe-nomenon whereby the abundance of cells in surface waterscan be reduced in a matter of hours by an abrupt increase inwind speed and associated increase in the mixed layer depth(Carranza and Gille 2015) diluting near-surface cells into agreater water volume However relative abundance has thedisadvantage that blooming of one species will cause a re-duction in relative abundance of other present species whentheir absolute abundances may not have changed

        22 Environmental covariates

        Phytoplankton abundances were related to a range of envi-ronmental covariates available at the time of sampling Theseincluded the SAM sea surface temperature (SST) salinity(S) time since sea ice cover (DSSI defined below) mini-mum latitude of sea ice in the preceding winter latitude andlongitude of sample collection (LATS and LONGE respec-

        tively) the days since 1st October that a sample was collected(D) the year of sampling (Y being the year that each springndashsummer sampling season began) the time of day that a sam-ple was collected and satellite-derived total chlorophyll con-tent Macronutrient concentrations phosphate (PO4) silicate(SiO4) and nitrate+ nitrite (hereafter nitrate NOx) were in-cluded as indicators of nutrient drawdown as a proxy for phy-toplankton productivity (Arrigo et al 1999)

        We obtained daily estimates of the SAM from the USNWS Climate Prediction Center (NOAA 2017) This datasetuses the principal component method definition of the SAM(Mo 2000) rather than the simple zonal-mean normalisedpressure difference technique (Gong and Wang 1999) Weused these estimates principally because daily values werereadily available other available estimates were largely sea-sonal averages only (Ho et al 2012) Water samples for dis-solved macronutrients were collected frozen on the ship andlater analysed at the Commonwealth Scientific and IndustrialResearch Organisation in Hobart Australia using standardspectrophotometric methods (Hydes et al 2010) The vari-able DSSI was defined as the time since sea ice had meltedto 20 cover after Wright et al (2010) as determined fromdaily Special Sensor MicrowaveImager (SSMI) sea ice con-centration data distributed by the University of Hamburg(Spreen et al 2008) Total chlorophyll content was estimatedfor each sample location by estimating the total chlorophyllcontent over a 20 kmtimes 20 km area centred at each samplelocation for all available times from 31 August to 1 Mayin the year of sampling (monthly observations) (Acker andLeptoukh 2007 GMAO 2017) and interpolating betweenobservations to estimate total chlorophyll content on the datesampled (some examples are reproduced in Fig S3) By thismethod total chlorophyll was estimated for 49 of the 52 sam-ples the remainder of samples having a paucity of data whichprecluded estimation

        23 Statistical analysis

        Three statistical analyses were undertaken to explore the hy-pothesis (i) constrained analysis of principal coordinates(CAP Anderson and Willis 2003 also known as distance-based redundancy analysis Legendre and Anderson 1999)was used to estimate the influence of multiple environmentalcovariates in simultaneously explaining community compo-sition (ii) clustering techniques were used to explore similar-ities in phytoplankton community composition among sam-ples independently of environmental information to definesignificantly different groups of samples with similar phyto-plankton community composition and (iii) correlation anal-ysis was used to support observed relationships between phy-toplankton community composition and environmental co-variates

        For CAP and cluster analysis relative abundance datawere square-root-transformed to reduce possible dominanceof the analysis by a few abundant taxa The BrayndashCurtis dis-

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        3820 B L Greaves et al SAM influences phytoplankton in SIZ

        Figure 3 Variance in phytoplankton community composition explained by the SAM versus timing and length of the averaged range ofdaily SAM values Response surfaces relate the fraction of total variance in phytoplankton community composition attributable to the SAMversus the number of days in the range of the averaged daily SAM (vertical axis) and the timing of the centre of the range of the averageddaily SAM (horizontal axis) The horizontal axis is expressed as (a) the time through the calendar year of the middle of the range and (b) thenumber of days before a sample was collected to the middle of the range Three obvious maxima are identified with crosses (SAMautumnSAMspring and SAMprior)

        similarity index (Bray and Curtis 1957) was used to calcu-late the resemblance of samples based on their communitystructure The advantage of this index for the cell count datawas that similarity among samples was not strongly affectedby the absence of taxa

        CAP was applied to the BrayndashCurtis resemblance matrixto partition total variance in community composition into un-constrained and constrained components with the latter rep-resenting the variation due to the environmental covariatesCAP is an example of a constrained ordination method inwhich the typical samplendashspecies matrix of abundances (asused in redundancy analysis) is replaced with a symmetricmatrix of pairwise sample similarities The advantage of thisdistance-based approach to redundancy analysis is that anyecologically relevant distance measure may be used herewe use the BrayndashCurtis metric because it discounts jointabsences between samples when determining similarity Aforward selection strategy was used to choose the optimummodel containing the minimum subset of constraints requiredto explain the most variation in phytoplankton communitystructure (Legendre et al 2011) Linear projections of sig-nificant covariates were plotted as arrows in the ordinationdiagram indicating the direction and magnitude of environ-mental gradients that were correlated with changes in thephytoplankton community (Davidson et al 2016) The vari-ance in phytoplankton community structure (as determinedfrom the ordination) explained by each environmental co-variate was calculated according to the procedure outlined inTer Braak and Verdonschot (1995) and attributed to Dargie(1984) Taxa were added to the CAP plots as weighted site

        averages for each species thereby indicating the relative in-fluence of the fitted environmental constraints on each phy-toplankton taxa group

        Hierarchical agglomerative clustering based on averagelinkage was performed on the BrayndashCurtis resemblance ma-trix Significant differences among sample clusters were de-termined according to the similarity profile (SIMPROF) per-mutation method of Clarke et al (2008) based on α = 005and 1000 permutations Clustering can identify the presenceof significant differences between the community composi-tion of the samples but clustering cannot identify an effect ofthe SAM at least not directly since environmental covariatesare not included in the cluster analysis

        Pair-wise correlation analyses were performed using Pear-sonrsquos correlation coefficient r to explore the relationshipsamong environmental variables and between these environ-mental variables and the relative abundances of phytoplank-ton taxa (Rodgers and Nicewander 1988) Given the largenumber of pair-wise correlations considered we applied aBonferroni correction to give consideration to the family-wise error rate by setting alpha which is usually α = 005(Gibbons and Pratt 1975 Cohen 1990) to αm where mis the total number of correlations considered Recognisingthat αm may be conservative (Nakagawa 2004) we indi-cated when calculated correlations were significant at bothα lt 005 and at Bonferroni-corrected α lt 005m

        Response surfaces were used to display the variance ex-plained from individual CAP analyses according to the num-ber of days averaged and the mid-point (or lagged mid-point) of the range of days averaged for each aggregated

        Biogeosciences 17 3815ndash3835 2020 httpsdoiorg105194bg-17-3815-2020

        B L Greaves et al SAM influences phytoplankton in SIZ 3821

        Table 1 Variance in the community composition of 22 phytoplankton taxa groups attributable to constraining environmental covariables inthe CAP analysis

        CAP analysis Variance Covariate Variance Fraction p

        category of totalvariance

        D 061 154 lt 0001SST 057 146 lt 0001SAMautumn 052 133 lt 0001LONGE 047 119 lt 0001

        (a) Variables fit individually as SAMspring 041 103 lt 0001the only constraining covariate SAMprior 039 99 lt 0001

        DSSI 023 59 0004S 018 47 0018Y 013 34 0086LATS 010 25 0228Minimum latitude of sea ice the previous winter 006 16 0537

        Variance explained by all constraining covariables 148 375 lt 0001

        (b) Optimum Individual D 061 154 lt 0001multi-covariate constraining SAMautumn 050 126 lt 0001model covariables LONGE 021 52 lt 0001

        SAMprior 017 43 0006

        Unexplained residual 246 625 Total variance in taxa composition between samples 394 100

        SAM index These allowed identification of maxima in cor-relation between the SAM and phytoplankton communitystructure Response surfaces were derived by evaluating sep-arate CAP analyses for each combination of (i) the tempo-ral positioning of the daily-SAM averaging range and (ii) thelength of the daily-SAM averaging range In constructing theresponse surfaces the range of the averaged daily SAM wascentred on (i) each calendar day individually (1 Januaryndash31 December) through the year associated with each sam-ple and alternatively (ii) relative to the time of sampling andlagged from 1 to 365 d prior to each sample collection datein 1 d increments The length of the SAM averaging rangewas varied in 2 d increments from zero to plus and minus182 d from the centre of the range Similar response surfaceswere constructed relating the correlation between the aver-aged daily SAM and (i) total chlorophyll and (ii) [PO4]

        Data management and manipulation summary statisticscorrelation analyses and scatter plots were undertaken in Mi-crosoft Excel (2016) and R (R Core Team 2016) Clusteranalysis and SIMPROF were undertaken using the R pack-age clustsig (Whitaker and Christman 2014) CAP analyseswere conducted using the capscale function in the R packagevegan (Dixon 2003)

        3 Results

        31 The influence of the SAM on phytoplanktoncommunity composition

        CAP analysis and pairwise correlation analysis both indi-cated the presence of a relationship between the SAM andphytoplankton community composition Clustering analysisshowed there to be sufficient and systematic variation in phy-toplankton community composition between samples thatsamples could be grouped

        Empirical identification of the time between variation inthe SAM and the manifestation of this variation in the phyto-plankton community structure revealed three maxima in phy-toplankton community composition explained by the SAMThe first of the maxima was an autumn seasonal SAM in-dex (SAMautumn) which was determined to be the average of57 daily SAM estimates centred on the preceding 11 March(11 Februaryndash8 April) SAMautumn explained up to 133 of the variance in phytoplankton community composition es-timated through CAP analysis (Fig 3a Table 1a) The sec-ond of the maxima was a spring seasonal index (SAMspring)which was determined to be the average of 75 daily SAMestimates centred on 25 October (20 Septemberndash3 Decem-ber) SAMspring explained up to 103 of variance in phyto-plankton community composition (Fig 3a Table 1a) Unlikethe other maxima that were related to the time of year thethird of the maxima was timed relative to the date of sample

        httpsdoiorg105194bg-17-3815-2020 Biogeosciences 17 3815ndash3835 2020

        3822 B L Greaves et al SAM influences phytoplankton in SIZ

        Table 2 (a) Summary statistics for environmental variables (b) correlations between taxa group relative abundances and environmental vari-ables (c) correlations among environmental variables (d) correlations between macronutrient concentrations and environmental variables(e) as in (f) but involving only the 50 of samples collected latest in the springndashsummer Correlations significant at α le 005 are in italicand correlations significant after Bonferroni adjustment are also underlined (α lt 00519 for correlations among environmental variablesα lt 00520 for correlations with taxa group relative abundance)

        Environmental variables

        D SAM

        autu

        mn

        SAM

        prio

        r

        SAM

        spri

        ng

        LO

        NGE

        DSS

        I

        SST

        S Y tota

        lchl

        orop

        hyll

        (a) Statistics for environmental covariables

        Unit days index index index E days C PSU year mg mminus3

        Average 96 minus02 01 04 142 65 06 337 ndash 029Min 20 minus08 minus13 minus15 136 minus26 minus18 332 2002 007Max 151 06 20 100 148 gt 365 30 341 2012 070n 52 11 52 11 52 52 5 52 11 49Average standard error of estimate ndash 014 013 014 ndash ndash ndash ndash ndash ndash

        (b) Correlations with taxa group relative abundance

        Chaetoceros atlanticus minus015 055 057 063 020 minus001 minus020 022 013 037Chaetoceros concavicorniscurvatus 037 036 027 035 minus007 027 025 minus014 011 025Chaetoceros castracanei minus036 minus002 026 020 041 minus012 minus036 minus007 minus007 020Chaetoceros dichaeta 048 038 031 029 minus013 037 035 minus017 020 036Chaetoceros neglectus minus070 minus006 042 024 048 minus040 minus069 056 minus004 033Cylindrotheca closterium 013 009 minus010 minus003 002 032 012 002 minus011 003Dactyliosolen antarcticus 018 037 034 027 minus006 018 013 minus008 006 037Dactyliosolen tenuijunctus minus018 minus044 minus008 minus016 016 minus019 minus017 023 minus002 minus010Dictyocha speculum (silicoflagellate) minus078 minus017 030 014 068 minus041 minus075 036 minus014 017discoid centric diatoms minus057 015 006 024 052 minus011 minus057 021 minus015 021Emiliania huxleyi (haptophyte) minus028 minus038 minus042 minus038 021 012 minus025 minus001 minus037 minus024Fragilariopsis cylindruscurta 026 minus006 minus008 minus009 minus058 minus008 035 minus012 024 minus015Fragilariopsis kerguelensis 023 052 016 025 minus007 019 022 minus046 minus005 007Fragilariopsis pseudonana minus013 022 minus002 022 minus010 minus005 minus003 012 022 002Fragilariopsis rhombica 016 minus039 minus058 minus057 minus013 013 022 minus012 minus024 minus059Fragilariopsis ritscheri 011 minus010 000 minus003 minus002 002 010 minus003 003 minus001Guinardia cylindrus 009 012 minus006 minus006 005 017 010 minus003 minus002 012Nitzschia acicularisdecipiens minus047 minus045 minus029 minus031 042 minus032 minus046 009 minus022 minus019Parmales spp (chrysophyte) minus060 minus029 015 minus009 042 minus042 minus065 036 minus028 016Petasaria heterolepis minus025 minus013 minus027 minus008 015 minus017 minus025 002 minus002 minus004Pseudo-nitzschia lineola minus035 039 019 037 036 minus009 minus035 018 001 026Thalassiothrix antarctica minus016 032 012 016 015 minus011 minus011 minus019 minus015 000

        (c) Correlations among environmental variables

        SAMautumn 032SAMprior minus006 051SAMspring 004 056 083LONGE minus063 minus017 010 005DSSI 056 018 minus003 007 minus027SST 092 027 minus014 minus003 minus068 060S minus043 minus014 031 021 023 minus013 minus041Y 018 027 035 032 minus024 002 027 minus006total chlorophyll minus002 050 072 069 011 minus008 minus015 014 043

        Biogeosciences 17 3815ndash3835 2020 httpsdoiorg105194bg-17-3815-2020

        B L Greaves et al SAM influences phytoplankton in SIZ 3823

        Table 2 Continued

        Environmental variables

        D SAM

        autu

        mn

        SAM

        prio

        r

        SAM

        spri

        ng

        LO

        NGE

        DSS

        I

        SST

        S Y tota

        lchl

        orop

        hyll

        (d) Correlations with macronutrients (n= 51)

        [NOx ] minus 077 -039 023 004 053 minus 043 minus 072 054 minus014 012[PO4] minus 073 minus 056 minus007 minus026 062 minus 052 minus 070 039 minus013 minus010[SiO4] minus 056 minus 042 026 minus005 040 minus 049 minus 063 039 009 022

        (e) Correlations with macronutrients (n= 26 later-in-season 50 of samples)

        [NOx ] minus018 minus 058 minus005 minus025 minus023 minus019 002 027 minus017 ndash[PO4] minus013 minus 074 minus051 minus 068 009 minus031 minus001 003 minus002 ndash[SiO4] minus010 minus051 minus004 minus031 minus016 minus035 minus044 minus005 034 ndash

        Figure 4 Maxima of SAM influence on phytoplankton community composition SAMprior was determined relative to sample collection thedepicted solid line represents the average temporal location of the 97 d period and the broken lines represent the earliest and latest extent ofthe range associated with the earliest and latest samples

        collection for each sample and comprised the average of the97 daily SAM estimates centred 102 d prior to each samplecollection date It explained 99 of the variance in phy-toplankton composition (SAMprior Fig 3b Table 1a) Notethat SAMprior and SAMspring temporally overlapped to vary-ing extents across the 52 samples (Fig 4) and so were notentirely independent covariates for example a sample col-lected in the summer had previous days contributing to bothSAMprior and SAMspring

        The optimum CAP model contained four covariates thatexplained the variance in phytoplankton community com-position among samples (Table 1b) While four CAP axeswere statistically significant (p lt 005) the first two axes to-gether explained a total of 311 of the variance in phyto-plankton community composition and the third and fourthaxes together only explained a further 64 (not tabu-lated) Thus Fig 6a illustrates most of the variance explainedby the CAP analysis SAMautumn explained the most vari-ance in community composition (126 ) and SAMprior ex-plained a further 43 of variance (Table 1b) These twoSAM indices were moderately and significantly positively

        correlated (r = 051 Table 2c p lt 0001) Both showedsimilar negative correlations (Table 2b) with the relativeabundances of the small diatoms Fragilariopsis rhombica(Fig 5a) and Nitzschia acicularisdecipiens and the coc-colithophorid Emiliana huxleyi and similar positive cor-relations with the abundances of larger diatoms Chaeto-ceros atlanticus Chaetoceros dichaeta and Dactyliosolenantarcticus A further six taxa showed a correlation withSAMautumn but not SAMprior namely positive correla-tions with Chaetoceros concavicorniscurvatus Fragilari-opsis kerguelensis (Fig 5b) Pseudo-nitzschia lineola andThalassiothrix antarctica and negative correlations withDactyliosolen tenuijunctus and the Parmales Three taxashowed correlations with SAMprior but not SAMautumnnamely positive correlations with Chaetoceros neglectus andthe silicoflagellate Dictyocha speculum and a negative cor-relation with Petasaria heterolepis

        In total 15 of the 22 taxa groups showed significantpairwise correlations (p lt 005) with one or more of theSAM indices with SAMautumn being the most influential (Ta-ble 2b) showing significant correlation with 12 of the 22 taxa

        httpsdoiorg105194bg-17-3815-2020 Biogeosciences 17 3815ndash3835 2020

        3824 B L Greaves et al SAM influences phytoplankton in SIZ

        Table3Identifiedtaxa

        groupstaxataxacodecellscountedcellsm

        easuredaverageindividualcellvolum

        eabundance(averagem

        inimum

        andm

        aximum

        )averagerelative

        abundanceaverage

        totalvolumeaverage

        relativevolum

        eandpercentage

        ofsamples

        inw

        hicheach

        taxagroup

        was

        identified

        TaxonTaxa

        codeC

        ellsC

        ellsA

        verageA

        bundanceR

        elativeA

        verageA

        veragevolum

        eSam

        plescounted

        measured

        individualabundance

        totalfraction

        ofw

        ithtaxon

        cellvolume

        averagevolum

        etotalcellvolum

        e

        Average

        Min

        Max

        Num

        berN

        umber

        microm3

        cellsmLminus

        1cellsm

        Lminus

        1cellsm

        Lminus

        1microm

        3m

        Lminus

        1

        Chaetoceros

        atlanticusca

        356479

        131651

        0364

        22

        81382

        14

        90

        Chaetoceros

        castracaneicca

        4834

        9406

        038

        03

        18616

        04

        48

        Chaetoceros

        concavicorniscurvatuscc

        120200

        344320

        0135

        07

        78443

        14

        77

        Chaetoceros

        dichaetacd

        25631943

        491423

        02503

        13

        145999

        29

        94

        Chaetoceros

        neglectuscn

        634488

        17683

        0697

        35

        11906

        02

        81

        Cylindrotheca

        closteriumcyc

        12250

        12117

        079

        07

        410601

        77

        D

        actyliosolenantarcticus

        da277

        472(61

        899)44

        0195

        16

        1860

        68027

        98

        D

        actyliosolentenuijunctus

        dt1981

        13503828

        2967

        131599

        895

        36716

        100

        D

        ictyochaspeculum

        (silicoflagellate)ds

        8184

        492010

        069

        05

        99301

        15

        48

        discoidcentric

        diatoms

        dcx965

        12808572

        13312

        69652

        437

        55673

        100

        E

        miliania

        huxleyi(haptophyte)ehu

        17370

        6524

        0192

        08

        355201

        58

        Fragilariopsis

        cylindruscurtafcx

        39873013

        70632

        08796

        17

        44167

        09

        98

        Fragilariopsiskerguelensis

        fk1031

        40553748

        1670

        105458

        369

        49265

        98

        Fragilariopsis

        pseudonanafps

        170115

        35526

        0201

        09

        1899904

        69

        Fragilariopsis

        rhombica

        fr4542

        346936

        65829

        207022

        23359

        06

        100

        Fragilariopsisritscheri

        fri46

        19572

        70

        8602

        11

        02002

        35

        G

        uinardiacylindrus

        guc110

        8110

        40515

        079

        06

        225921

        41

        67

        Nitzschia

        acicularisdecipiensnix

        1133509

        251162

        0977

        57

        46705

        10

        98

        Parmales

        spp(chrysophyte)parm

        3222

        838

        0668

        17

        33400

        27

        Petasaria

        heterolepis(other)

        pet45

        ndash(65)

        70

        18703

        2667

        01

        6

        Pseudonitzschia

        lineolapsl

        681403

        109391

        4376

        41

        8446015

        100

        Thalassiothrix

        antarcticata

        112269

        (63000)

        130

        17206

        314

        42448

        85

        Biogeosciences 17 3815ndash3835 2020 httpsdoiorg105194bg-17-3815-2020

        B L Greaves et al SAM influences phytoplankton in SIZ 3825

        Figure 5 Scatter-plots (a b) examples of phytoplankton taxon relative abundance versus SAMautumn (c) LONGE of sample collectionversus D and (d) [PO4] versus SAMautumn Each figure shows r2 and p associated with the relationship A line of least-squares best fit isprovided to give an indication of trend

        groups When applying the conservative Bonferroni-adjustedα = 00025 seven taxa groups showed significant correlation(p lt 00025) with any SAM index and four with SAMautumn

        SAMprior and SAMspring represented a similar time span inthe spring immediately prior to sampling (Fig 4) and werestrongly and significantly correlated (r = 083 Table 2cp lt 0001) Samples were collected over a calendar rangeof 140 d (20 Octoberndash28 February Table 2a) and thus the97 d period represented by SAMprior varied in its positionin the calendar across the 140 d spread of the 52 samples(Fig 4) SAMprior and SAMspring also showed similar corre-lation signs with taxa group relative abundances (Table 2b)It was not possible however to determine whether the pre-season SAM influence was a spring effect or a prior-to-sampling effect and whilst both appear to be important ex-planatory terms only SAMprior was retained in the optimumCAP model (Table 1b)

        In the optimum multi-covariate CAP model D explainedthe greatest proportion of the observed variance in phyto-plankton community composition (Table 1b) D was signif-icantly correlated (p lt 00025) with SST S and DSSI andthe variable singly captured the most variation in phytoplank-ton community composition associated with seasonal suc-cession Alone it explained 154 of the total variance (Ta-

        ble 1b) with its effect on the phytoplankton community be-ing approximately orthogonal to that of the SAM (Fig 6a) Aweak positive relationship detected between SAMautumn andD indicated a weak trend of sampling later in the springndashsummer period in years with a higher autumn SAM (r =032 Table 2c p = 002) but otherwise the SAM indicesand D were un-related

        A total of 10 taxa groups showed significant correlation(p lt 005) between their relative abundance and D (Ta-ble 2b) Chaetoceros castracanei C neglectus D specu-lum E huxleyi N acicularisdecipiens Parmales P line-ola and the discoid centric diatoms showed negative relative-abundance correlations with D indicating greatest relativeabundance early in the springndashsummer while C concavicor-niscurvatus and C dichaeta showed greater relative abun-dance later in the springndashsummer A negative correlation(minus063 p lt 0001) was detected between the longitude ofindividual sample collection (LONGE) and D indicatingthat samples collected later in the springndashsummer were morelikely to have been collected towards the west in the sampledregion (Table 2c Fig 5c)

        Following cluster analysis similarity profile (SIMPROF)permutation analysis identified seven significantly differentgroups (p lt 005) with samples loosely grouped on the ba-

        httpsdoiorg105194bg-17-3815-2020 Biogeosciences 17 3815ndash3835 2020

        3826 B L Greaves et al SAM influences phytoplankton in SIZ

        Figure 6 (a) CAP analysis of phytoplankton community composition Dots represent individual samples with colours corresponding tosignificant clusters (Fig 6b) The 22 phytoplankton taxagroups are overlain as weighted averages of their sample scores (red abbreviationsafter Fig 2) with positions plotted with a 3-times-larger distance from the origin to more easily visualise their relationships with constrainingenvironmental variables Linear projections of the significant constraining environmental covariates appear as blue arrows the length andangle of which represent the magnitude and direction of influence of each variable on community composition The inset shows the taxalocated close to the origin diatoms fri and cyc collocating (b) Cluster analysis dendrogram of the 52 samples based on similarities inphytoplankton community structure using colour to show seven significantly different groups (numbered 1ndash7 solid lines α = 005) Samplelabels contain season and voyage (eg 0809v2b= austral springndashsummer over 2008ndash2009 voyage designation 2 sample b is the secondsample obtained from the SIZ during that voyage) SAMautumn value SAMprior value and the D value

        sis of their within-season successional maturity (D) and theSAM (Fig 6b) and demonstrated that there were signifi-cant differences between the community composition of thesamples The group structure determined by cluster analy-sis was displayed in the CAP ordination (using colour) todemonstrate that samples that clustered together were indeedclose to one another in the two-dimensional (2D) ordina-tion (Fig 6a) with their positioning further indicating theinfluences of D and the SAM on cluster groupings This lentconfidence that the 2D ordination was a reasonable approx-imation to the full high-dimensional structure As we knewthe values for the environmental covariates for each sam-ple it was possible to determine the correlation between the2D CAP solution and each environmental covariate We dis-played these correlations as a projected vector (arrow) wheredirection indicates the sign and length indicates strengthThis showed samples in clusters 3 and 4 (Fig 6b) were com-monly associated with a more positive SAM while those inclusters 5 6 and 7 were commonly associated with morenegative SAM values Samples in clusters 2 and 5 were com-

        monly collected earlier in the springndashsummer period (lowerD) while those in clusters 1 4 6 and 7 were commonly col-lected later (Fig 6)

        Other considered environmental covariates that did notsignificantly influence community composition were thetime of the day that a sample was collected and the mini-mum latitude reached by sea ice cover in the previous winter(Supplement Table S1)

        These analyses were also undertaken using phytoplanktonabsolute abundances rather than with relative abundances asreported above The analysis of absolute abundance showedsimilar temporal peaks in variance explained (SupplementFig S4) although it explained less variance (SAMautumn ex-plaining 109 SAMspring 91 and SAMprior 92 ) (Ta-ble S3) Individual taxa correlations with SAM indices (Ta-ble S4) showed a similar pattern to those estimated using rel-ative abundances (Table 2b)

        Biogeosciences 17 3815ndash3835 2020 httpsdoiorg105194bg-17-3815-2020

        B L Greaves et al SAM influences phytoplankton in SIZ 3827

        32 Influence of the SAM on phytoplanktonproductivity

        Two indicators of the influence of the SAM on phytoplank-ton productivity were obtained (i) the influence of the SAMon satellite-derived total chlorophyll and (ii) the influence ofthe SAM on macronutrient concentrations indicating nutri-ent drawdown associated with productivity Using the timesand locations of the 52 samples over the 11 years of ourstudy satellite-derived total chlorophyll showed positive cor-relation with all SAM indices r = 050 (p lt 0001) withSAMautumn r = 072 (p lt 0001) with SAMprior and r =069 (p lt 0001) with SAMspring (Table 2c) Peaks in thecorrelation of total chlorophyll with the SAM were evidentin the preceding autumn and spring and prior to sampling inresponse surfaces for NASA satellite total chlorophyll alongwith a peak in early winter (Fig S1) While further data arerequired to confirm this correlation the results obtained inthis study supported the presence of a positive relationshipbetween productivity and the SAM

        The observed concentrations of the macronutrients NOx PO4 and SiO4 showed significant negative correlationswith SAMautumn (r =minus039 minus056 minus042 respectively Ta-ble 2d p 0005 lt 0001 0002 respectively) The concen-trations of these nutrients showed stronger negative correla-tions with SAMautumn when the 50 of samples collectedlatest in the springndashsummer season was considered (r =minus058 minus074 minus051 Table 2e p 0002 lt 0001 0008respectively) Macronutrient concentrations were unrelatedto either SAMprior or SAMspring (Table 2d) Peaks in neg-ative correlation of the SAM on [PO4] were evident in thepreceding autumn and spring prior to sampling in responsesurfaces with the peaks being more negative when only the50 of samples collected later in the springndashsummer wereconsidered (Fig S2) The concentrations of macronutrientsalso showed expected decline through the springndashsummercorrelations between [NOx] [PO4] and [SiO4] withD wereminus077minus073 andminus056 respectively (Table 2d p lt 0001lt 0001 lt 0001 respectively)

        33 Observed occurrence and abundance

        Abundance of individual taxa groups averaged 133 cells permillilitre and ranged to a maximum of 8796 cells per mL (Ta-ble 3) Individual cell volume ranged from 8 microm3 for the Par-males spp to gt 60 000 microm3 for the diatoms Dactyliosolenantarcticus and Thalassiothrix antarctica Average relativeabundance ranged from 02 for the diatom Fragilariopsisritscheri to 17 for the combined taxa group Fragilariop-sis cylindruscurta Of the 22 taxa groups resolved in thisstudy four taxa groups were identified in all 52 samples and11 taxa groups were identified in more than 90 of samples(Table 3)

        4 Discussion

        41 The SAM and phytoplankton communitycomposition

        Our results show that the SAM shows a relationship withthe community composition of phytoplankton in the sea-sonal ice zone (SIZ) of the Southern Ocean (SO) This con-clusion was supported by a combination of three analyses(i) Permutation-based analyses of cluster structure demon-strated that the 52 samples were separable into seven statisti-cally different groups on the basis of community abundancecomposition of the 22 taxa groups (Fig 6b) and thus thatthere was variation between samples that might be explain-able with known environmental variables if clustering hadrevealed few or no clusters it would have been indicative oflevels of community variance (either high or low) unlikelyto be systematically explainable with the environmental vari-ables (ii) CAP analysis identified the SAM as a significantexplanatory variable on the structure of the phytoplanktoncommunity (Table 1b) and showed that groups identified incluster analysis were generally distinguished by the SAMand the D that a sample was collected (Fig 6) (iii) 15 ofthe 22 taxa groups resolved showed significant pairwise cor-relations (p lt 005) between relative abundance and at leastone of the three derived SAM indices (Table 2b)

        The derived SAM index with greatest influence on phy-toplankton community composition SAMautumn (Figs 3 4)explained 126 of the variance of phytoplankton commu-nity composition in the optimum multi-variable CAP model(Table 1b) SAMautumn represented the average SAM aroundthe time that sea ice was extending northward through theSIZ (Fig 1a) At this time phytoplankton productivity inthe SIZ would have declined to around 30 of its mid-summer maximum (Moore and Abbott 2000 Arrigo et al2008 Constable et al 2014) and phytoplankton would bepreparing for winter by variously producing energy stor-age products producing resting spores or cysts reducingmetabolic rate and engaging in heterotrophic consumptionfor energy (Fryxell 1989 McMinn and Martin 2013) Theformation of sea ice reduces available light by as much as999 (McMinn et al 1999) severely limiting light forphytoplankton for around half of each year at the rangeof longitude sampled latitude 64 S was covered in seaice for half the time across the sampled years (Fig 1a)Windier conditions associated with a more positive SAM inautumn may delay the consolidation of sea ice into largerfloes (Roach et al 2018) extending the phytoplankton grow-ing season and possibly increasing the relative abundanceof taxa that occur later in the springndashsummer season Thequantity of phytoplankton that survive the Antarctic winteris extremely low (McMinn and Martin 2013) and the abun-dance of taxa present and their metabolic condition whenthe autumn sea ice forms may strongly influence their vi-ability relative vigour and availability to seed the subse-

        httpsdoiorg105194bg-17-3815-2020 Biogeosciences 17 3815ndash3835 2020

        3828 B L Greaves et al SAM influences phytoplankton in SIZ

        quent post-winter bloom This possibility was supported bythe observation that the only two taxa groups observed tohave significantly (p lt 005) higher relative abundance laterin the springndashsummer the Chaetoceros species C dichaetaand C concavicorniscurvatus were both observed to alsoshow significantly higher relative abundances when the pre-ceding SAMautumn was more positive (Table 2b) Thus SAM-induced effects on phytoplankton in the autumn could wellinfluence the phytoplankton community structure in the fol-lowing post-winter productive season

        Extending the springndashsummer productive season by de-laying the autumn consolidation of sea ice may result inmore prolonged declines in relative abundance of taxa thatare more prolific earlier in the springndashsummer and may thusreduce the population from which the following post-winterbloom is initiated Of the eight taxa groups showing sta-tistically higher relative abundance earlier in the springndashsummer (p lt 005) three showed corresponding statisticallylower relative abundances with higher preceding SAMautumn(Emiliana huxleyi Nitzschia acicularisdecipiens and Par-males spp p lt 005 Table 2b) supporting this conjec-ture Of the remaining five taxa groups of the eight fourshowed no detectable relationship with SAMautumn and one(Pseudonitzschia lineola) showed a positive relationship

        Two other derived SAM indices were found to influencephytoplankton SAMspring and SAMprior These indices weredifficult to distinguish due to their largely overlapping timeperiods (Fig 4) and they were strongly correlated (r = 083p lt 005 Table 2c) with similar influence on taxonomicabundances (Table 2b) SAMprior was the preferred parame-ter for the multiparameter CAP model in which it explained43 of total variance Windier and stormier conditions as-sociated with a higher SAM in the months prior to sam-pling would increase nutrient input to the euphotic zone fromdeeper waters (Lovenduski and Gruber 2005) promotingproductivity whilst at the same time episodically dilutingsurface phytoplankton through deeper mixing More stormyconditions may also have brought about a faster break-upof winter sea ice promoting earlier spring phytoplanktongrowth Conversely windier conditions would also restrictstratification of the surface ocean precluding phytoplanktonbloom formation lessening productivity (Fitch and Moore2007) and reducing the abundance of early blooming taxaThis may explain the responses of Emiliania huxleyi and thecombined Nitzschia acicularisdecipiens group which bothshowed early maximum abundances (r =minus028 and minus047respectively with D p lt 005 Table 2b) and also nega-tive correlations with SAMspring and SAMprior (r =minus029to minus042 p lt 005 Table 2b) Five other taxa groups withearly maximum abundance (negative correlation with Dp lt 005) showed no detectable correlation with SAMspringand one (Pseudonitzschia lineola) showed a positive rela-tionship indicating that their abundances were determinedby environmental factors that prevail early in the season butnot those factors altered by variations in the SAM Histori-

        cally the variance in the SAM is lower in the spring quar-ter than in other quarters (NOAA 2005) perhaps explainingwhy SAMspring and SAMprior explained less variance in com-munity composition than SAMautumn

        We expected the SAM prior to sampling (SAMprior andSAMspring) would show a relationship with phytoplanktoncomposition and a lesser relationship of the SAM in thewinter is plausible because the surface of the ocean is in-sulated from atmospheric conditions by sea ice The relation-ship with the SAM the previous autumn was not expected butis also plausible as it coincides with the time when sea ice isforming and thus a critical time for phytoplankton preparingto hibernate the half-year of sea ice cover We also observeda similar relationship between SAMautumn and (i) NASAsatellite total chlorophyll and (ii) macronutrient concentra-tions across all samples as well as (iii) a stronger correla-tion with macronutrient concentrations when only the sam-ples collected in the latter half of the season were considered(Table 2c d and e respectively) We also observed maximain the autumn SAM relationship in response-surface analy-ses of the correlation between the SAM and (i) NASA satel-lite total chlorophyll and (ii) [PO4] in all samples as well as(iii) a stronger maxima with [PO4] when only the samplescollected later in the season were considered (Figs S1 andS2) Both total chlorophyll and [PO4] were observationallyindependent of the taxonomic cell counts and whilst [PO4]was estimated from parallel samples as the taxonomic analy-sis NASA satellite total chlorophyll had no material connec-tion with collected samples being linked only geographicallyand temporally and thus offers independent support for theunexpected observation that phytoplankton community com-position in the springndashsummer is related to the SAM in theprevious autumn The empirically defined SAMautumn alsoshowed significant (p lt 005) pairwise correlations with 12of the 22 taxa groups resolved (Table 2b)

        42 Effect of the SAM on phytoplankton taxa

        Nothing has been previously reported with respect to the cli-matic preferences of the majority of taxa identified in thisstudy and only 10 of the 22 taxa groups considered in ourresearch had data records in the Ocean Biogeographic In-formation System (OBIS 2020) Some of the observed taxahave been reported to show various relationships with en-vironmental factors including sea-surface temperature timethrough the season and latitude but often at the taxonomiclevel of genera rather than at a species level (Burckle et al1987 Chiba et al 2000 Waters et al 2000 Green and Sam-brotto 2006 Gomi et al 2007) We however observed dif-fering responses to environmental variables among closelyrelated taxa This was exemplified by the opposite correla-tions of Chaetoceros species C dicheata and C neglectuswith D (048 and minus070 respectively p lt 00025 Table 2b)and the opposite correlations of Fragilariopsis species Frhombica and F kerguelensis with SAMautumn (minus039 and

        Biogeosciences 17 3815ndash3835 2020 httpsdoiorg105194bg-17-3815-2020

        B L Greaves et al SAM influences phytoplankton in SIZ 3829

        052 respectively p lt 005 Table 2b Fig 5a b) The strongand opposite response to these variables by species belong-ing to the same genus indicates the importance of species-level observation in detecting subtle changes in pelagic phy-toplankton communities

        A third of analysed taxa comprising 7 taxa and 23 of all counted cells showed no detectable relationship withthe SAM This could be due to large errors associated withlow counts of rarer taxa because unaccounted variation wasmasking any relationship or because the taxa were insensi-tive to the SAM There is less chance of detecting relation-ships between taxa and environment variables when fewerindividuals are counted however some less represented taxadid show relationships with SAM indices (eg Emilianiahuxleyi |r|gt 038 Table 2b) Of the 22 taxa resolved 5showed no significant relationships with either the SAM orD All were comparatively scarce and together representedonly 2 of all cells counted Assessing species composi-tions across a greater fraction of each sample and thus count-ing more of the scarcer taxa may have revealed relationshipsbetween these rarer taxa and environmental variables (Nak-agawa and Cuthill 2007) Yet it remains possible that thesetaxa are actually unaffected by seasonal succession and theSAM instead responding to other environmental variablesthat were not measured as part of this study or that they re-main as persistent but relatively rare background taxa withrespect to the overall phytoplankton assemblage

        This is the first study to show a link between variationin the SAM and the composition of phytoplankton commu-nities in the SO although similar findings have been re-ported for other major climatic phenomena in other partsof the globe The climatically similar Northern HemisphereAnnular Mode (NAM) causes increased westerly winds anddeeper mixed layers at middle to high northern latitudes inits positive phase (Nehring 1998 Thompson et al 2003Kahru et al 2011) The NAM has been related to the tim-ing abundance and biomass of phytoplankton taxa at highnorthern latitudes (Nehring 1998 Belgrano et al 1999 Ot-tersen et al 2001 Blenckner and Hillebrand 2002) andto the delayed occurrence of maximum chlorophyll in theNorth Atlantic Summer (Kahru et al 2011) Similarly theEl NintildeondashSouthern Oscillation (ENSO) equatorial mode hasbeen shown to influence the distribution and abundance ofphytoplankton in the tropical oceans (Blanchot et al 1992)

        Phytoplankton are the pastures of the oceans and it is plau-sible that the climate in both autumn and spring influencethe phytoplankton community composition of phytoplank-ton and their ecological progression through the productivespringndashsummer period in the SIZ Climate change impactshave now been documented across every type of ecosystemon Earth (Scheffers et al 2016 Harris et al 2018) and thedistribution abundance phenology and productivity of phy-toplankton communities throughout the world are changingin response to warming acidifying and stratifying oceans(Hoegh-Guldberg and Bruno 2010) We have detected an

        association between variation in phytoplankton communitycomposition and variation in the SAM over a relatively brief11-year monitoring period despite all the other environmen-tal factors that elicit variability in phytoplankton communi-ties in the SIZ of the SO

        43 The effects of the SAM on productivity andbiomass

        A positive SAM has previously been shown to be associ-ated with increased standing stocks and productivity of phy-toplankton in the SIZ of the SO (Arrigo et al 2008 Boyce etal 2010 Soppa et al 2016) In the SIZ above the AntarcticDivergence nutrients are replenished from the deeper oceanthrough the unproductive winter and the levels of nutritionremaining at the end of summer integrate the total draw-down of nutrients by phytoplankton production over the en-tire springndashsummer growing season (Arrigo et al 1999) Weobserved this nutrient drawdown through the springndashsummeras the negative correlation between all macronutrient con-centrations and D (Table 2d) We also observed a nega-tive relationship between all macronutrient concentrations inthe springndashsummer and the previous SAMautumn (Table 2dFig 5d) suggesting that an elevated SAM in autumn leadsto greater productivity and thus greater nutrient drawdownduring the following springndashsummer The nutrient concen-trations at the end of the springndashsummer productive seasonwould be expected to best represent the total productivityover the season we observed that the correlation between nu-trient concentrations and SAMautumn were higher when onlythe 50 of samples collected later in the springndashsummerwere considered (Table 2e) further supporting the conjec-ture that a higher SAM in the autumn is linked with greaterproductivity through the following springndashsummer

        The observed positive relationship between total chloro-phyll and all the SAM indices (r = 05 to 072 p lt 00025Table 2c) and the presence of apparent spring and autumnmaxima in the response surfaces of the variance in totalchlorophyll explained by the SAM (Fig S1) further sup-port the conjecture that a more positive SAM is linked withgreater total chlorophyll and thus greater total productivityin the SIZ The total chlorophyll data considered were limitedto the 52 samples collected that is estimated for the timesand locations of each sample collection Estimates werecoarsely determined as interpolations of available monthlypredictions (Fig S3) and estimates could be thus obtainedfor only 49 of the 52 samples Yet there are indicators of re-liability in the sparse information the diatom Fragilariopsisrhombica is always relatively small (Table 3) and when therelative abundance of this taxon was high total chlorophyllwas lower (r =minus059 p lt 00025 Table 2b) and when therelative abundance of larger diatoms were high total chloro-phyll was also often high (eg Dactyliosolen antarcticusr = 037 p lt 005 Table 2b)

        httpsdoiorg105194bg-17-3815-2020 Biogeosciences 17 3815ndash3835 2020

        3830 B L Greaves et al SAM influences phytoplankton in SIZ

        44 Implications

        The SIZ is a productive region of the SO (Moore and Abbott2000) and changes to the SIZ phytoplankton communityhave potentially far-reaching implications for the ecosystemservices these organisms provide including carbon exportto the deep ocean and supporting the productivity of almostall Antarctic life Increases in the relative abundance of thelarger Chaetoceros spp diatoms would favour grazing bylarge metazooplankton especially krill (Boyd et al 1984Kawaguchi et al 1999 Moline et al 2004) which linkphytoplankton to whales seabirds seals and most higherAntarctic life forms (Smetacek 2008) Such changes wouldalso increase the efficiency of the biological pump as thelarger phytoplankton sink more rapidly than small phyto-plankton (Alldredge and Gotschalk 1989) and increasedgrazing by krill would reparcel some phytoplankton biomassinto faeces that would also sink more rapidly (Cadeacutee etal 1992) Such changes in carbon flux and trophodynam-ics would act as a negative feedback on climate change byspeeding the sequestration of carbon to the deep ocean

        The SAM is predicted to become increasingly positivein the future (Arblaster and Meehl 2006 Swart and Fyfe2012 Gillett and Fyfe 2013 Abram et al 2014 Solomonet al 2016) Our results cannot necessarily be extrapolatedto infer changes that will likely occur as the SAM contin-ues to increase as evolutionary responses can partly miti-gate adverse effects on phytoplankton of longer-term climatechange and future changes in climate are likely to imposeother co-stressors on phytoplankton inhabiting these waters(Lohbeck et al 2014 Schluumlter et al 2014 Deppeler andDavidson 2017) Our study showed that some of the vari-ation in the phytoplankton composition in the seasonal icezone was significantly related to variation in the SAM andthat the sign and magnitude of the correlation with the SAMdiffered among species

        5 Conclusions

        Statistical analyses indicated that together the autumn andspring SAM explained a higher percentage (179 ) of thevariation in phytoplankton community composition than anyvariable mostly due to the autumn SAM (up to 133 ) Intotal this exceeded the variance explained by any other vari-able even that attributable to the time of the season thatthe sample was collected (154 ) or other critical phys-ical variables such as temperature salinity and latitudeFurthermore 15 of the 22 phytoplankton taxa identified inthis study showed significant correlation with the SAM andthere were indications that a more positive SAM was relatedto increased phytoplankton productivity in the SIZ Whilethis study was limited in both timespan (11 austral springndashsummers) and the overall variance in phytoplankton compo-sition explained by all the constraining variables (375 ) it

        suggests that the phytoplankton of the SIZ are indeed sensi-tive to changes in the SAM and thus possibly responsive toclimate change

        Data availability The dataset used in this paper is available athttpsdoiorg10261795d9181f7308bd (Greaves et al 2019)

        Supplement The supplement related to this article is available on-line at httpsdoiorg105194bg-17-3815-2020-supplement

        Author contributions Author contributions BLG contributed toconceptualisation data curation formal analysis investigationmethodology software and supervision validation visualisationwriting of the original draft writing and review and editing ATDcontributed to conceptualisation funding acquisition formal anal-ysis methodology project administration resources supervisionwriting and review and editing ADF contributed to formal analy-sis methodology resources writing and review and editing JPMcontributed to formal analysis methodology software writing andreview and editing AM contributed to project administration su-pervision writing and review and editing AMcM contributed tofunding acquisition project administration resources writing andreview and editing SWM contributed to conceptualisation fund-ing acquisition formal analysis writing and review and editing

        Competing interests The authors declare that they have no conflictof interest

        Acknowledgements Sampling on Astrolabe was supported bya FrenchndashAustralian research collaboration The Institut PolaireFranccedilais Paul-Eacutemile-Victor supported access to the ship and fieldoperations The biogeochemical data collection was coordinatedby Alain Poisson and Nicolas Metzl Sorbonne Universiteacute andBronte Tilbrook CSIRO Oceans and Atmosphere Steve Rintoul(CSIRO) and Rose Morrow (LEGOS) coordinated the collection ofsalinity and temperature data The Antarctic Climate and Ecosys-tems CRC and the Integrated Marine Observing System are thankedfor supporting the operation of sensors the collection of water sam-ples and nutrient analyses reported in this study Alan Poole MattSherlock John Akl Kate Berry Lesley Clementson Brian Grif-fiths (CSIRO) Rick van den Enden Rob Johnson (AAD) and themany dedicated volunteers and shipsrsquo officers and crew are thankedfor their important contributions to the field efforts and data man-agement We thank the University of Tasmania and the AustralianAntarctic Division for the space and resources needed to undertakethis work Thanks to Nathaniel Bindoff and Simon Wotherspoon fortheir consideration of parts of the paper Thanks are due to the re-viewer Damiano Righetti for the valuable input he provided in par-ticular for pointing out ambiguities and small errors and improvingthe clarity of the paper and an anonymous reviewer for the struc-tural and theoretical considerations Total chlorophyll data used inthis paper were produced with the Giovanni online data system de-veloped and maintained by the NASA GES DISC

        Biogeosciences 17 3815ndash3835 2020 httpsdoiorg105194bg-17-3815-2020

        B L Greaves et al SAM influences phytoplankton in SIZ 3831

        Financial support This research has been supported by the Uni-versity of Tasmania (Institute of Marine and Antarctic Studies) bythe Australian Governmentrsquos Cooperative Research Centre programthrough the Antarctic Climate and Ecosystems CRC the AustralianAntarctic Division (projects 40 and 4107) and by the Australian Re-search Councilrsquos Special Research Initiative for Antarctic GatewayPartnership (project no SR140300001)

        Review statement This paper was edited by Julia Uitz and re-viewed by Damiano Righetti and one anonymous referee

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        Gong D and Wang S Definition of Antarctic os-cillation index Geophys Res Lett 26 459ndash462httpsdoiorg1010291999GL900003 1999

        Greaves B L Davidson A T and Fraser A D The SouthernAnnular Mode (SAM) influences phytoplankton communities inthe seasonal ice zone of the Southern Ocean Ver 1 Australian

        Antarctic Data Centre httpsdoiorg10261795d9181f7308bd2019

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        Harris R M B Beaumont L J Vance T R Tozer C R Re-menyi T A Perkins-Kirkpatrick S E Mitchell PJ NicotraAB McGregor S Andrew NR Letnic M Kearney M RWernberg T Hutley L B Chambers L E Fletcher M-SKeatley M R Woodward C A Williamson G Duke N Cand Bowman D M J S Biological responses to the press andpulse of climate trends and extreme events Nat Clim Change8 579ndash587 httpsdoiorg101038s41558-018-0187-9 2018

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        Ho M Kiem A S and Verdon-Kidd D C The Southern An-nular Mode a comparison of indices Hydrol Earth Syst Sci16 967ndash982 httpshttpsdoiorg105194hess-16-967-20122012

        Hoegh-Guldberg O and Bruno J F The impact of climate changeon the worldrsquos marine ecosystems Science 328 1523ndash1528httpsdoiorg101126science1189930 2010

        Hydes D J Aoyama M Aminot A Bakker K Becker S Cov-erly S Daniel A Dickson A G Grosso O Kerouel Rvan Ooijen J Sato K Tanhua T Woodward E M S andZhang J Z Determination of Dissolved Nutrients (N P SI)in Seawater With High Precision and Inter-Comparability Us-ing Gas-Segmented Continuous Flow Analysers in The GO-SHIP repeat hydrography manual a collection of expert re-ports and guidelines edited by Hood E M Sabine C Land Sloyan B M IOCCP report number 14 ICPO publicationseries number 134 UNESCO-IOC Paris France available athttpwwwgo-shiporgHydroManhtml (last access 15 January2020) 2010

        Clem K R Crosta X de Lavergne C Eisenman I Eng-land M H Fogt R L Frankcombe L M MarshallG J Masson-Delmotte V Morrison A K Orsi A JRaphael M N Renwick J A Schneider D P Simp-kins G R Steig E J Stenni B Swingedouw D andVance T R Assessing recent trends in high-latitude SouthernHemisphere surface climate Nat Clim Change 6 917ndash926httpsdoiorg101038nclimate3103 2016

        Kahru M Brotas V Manzano-Sarabia M and Mitchell B GAre phytoplankton blooms occurring earlier in the Arctic GlobChange Biol 17 1733ndash1739 httpsdoiorg101111j1365-2486201002312x 2011

        Biogeosciences 17 3815ndash3835 2020 httpsdoiorg105194bg-17-3815-2020

        B L Greaves et al SAM influences phytoplankton in SIZ 3833

        Kawaguchi S Ichii T and Naganobu M Green krill the indi-cator of micro-and nano-size phytoplankton availability to krillPolar Biol 22 133ndash136 1999

        Kohyama T and Hartmann D L Antarctic sea ice response toweather and climate modes of variability J Clime 29 721ndash741httpsdoiorg101175JCLI-D-15-03011 2016

        Kwok R and Comiso J C Southern Ocean climate andsea ice anomalies associated with the Southern Oscilla-tion J Clim 15 487ndash501 httpsdoiorg1011751520-0442(2002)015lt0487SOCASIgt20CO2 2002

        Lampitt R S and Antia A N Particle flux in deep seas Regionalcharacteristics and temporal variability Deep-Sea Res Pt I44 1377ndash1403 httpsdoiorg101016S0967-0637(97)00020-4 1997

        Lannuzel D Schoemann V de Jong J Tison J L andChou L Distribution and biogeochemical behaviour of ironin the East Antarctic sea ice Mar Chem 106 18ndash32httpsdoiorg101016jmarchem200606010 2007

        Lefebvre W Goosse H Timmermann R and FichefetT Influence of the Southern Annular Mode on the seaice-ocean system J Geophys Res-Ocean 109 1ndash12httpsdoiorg1010292004JC002403 2004

        Legendre P and Anderson M J Distance-based re-dundancy analysis testing multispecies responsesin multifactorial ecological experiments EcolMonogr 69 1ndash24 httpsdoiorg1018900012-9615(1999)069[0001DBRATM]20CO2 1999

        Legendre P Oksanen J and ter Braak C J Testing thesignificance of canonical axes in redundancy analysis Meth-ods Ecol Evol 2 269ndash277 httpsdoiorg101111j2041-210X201000078x 2011

        Lenton A and Matear R J Role of the Southern Annular Mode(SAM) in Southern Ocean CO2 uptake Global Biogeochem Cy21 1-17 httpsdoiorg1010292006GB002714 2007

        Lohbeck K T Riebesell U and Reusch T B H Gene expres-sion changes in the coccolithophore Emiliania huxleyi after 500generations of selection to ocean acidification P Roy Soc B281 1ndash7 httpsdoiorg101098rspb20140003 2014

        Lovenduski N S Gruber N Doney S C and Lima I D En-hanced CO2 outgassing in the Southern Ocean from a positivephase of the Southern Annular Mode Global Biogeochem Cy21 1ndash14 httpsdoiorg1010292006GB002900 2007

        Lovenduski N S and Gruber N Impact of the Southern AnnularMode on Southern Ocean circulation and biology Geophys ResLett 32 1ndash4 httpsdoiorg1010292005GL022727 2005

        Mackas D L Does blending of chlorophylldata bias temporal trend Nature 472 E4ndashE5httpsdoiorg101038nature09951 2011

        Mackintosh A N Anderson B M Lorrey A M Renwick JA Frei P and Dean S M Regional cooling caused recentNew Zealand glacier advances in a period of global warmingNat Commun 8 1ndash13 httpsdoiorg101038ncomms142022017

        Marshall G J Trends in the Southern Annu-lar Mode from Observations and Reanalyses JClim 16 4134ndash4143 httpsdoiorg1011751520-0442(2003)016lt4134TITSAMgt20CO2 2003

        Marshall G J Half-century seasonal relationships between theSouthern Annular mode and Antarctic temperatures Int J Cli-matol 27 373ndash383 httpsdoiorg101002joc1407 2007

        Martin A McMinn A Heath M Hegseth E N and Ryan KG The physiological response to increased temperature in over-wintering sea ice algae and phytoplankton in McMurdo SoundAntarctica and Tromsoslash Sound Norway J Exp Mar Biol Ecol428 57ndash66 httpsdoiorg101016jjembe201206006 2012

        Massom R A and Stammerjohn S E Antarctic sea ice changeand variability ndash Physical and ecological implications Polar Sci4 149ndash186 httpsdoiorg101016jpolar201005001 2010

        McMinn A Ashworth C and Ryan K Growth and Productivityof Antarctic Sea Ice Algae under PAR and UV Irradiances BotMar 42 401ndash407 httpsdoiorg101515BOT1999046 1999

        McMinn A and Martin A Dark survival in awarming world P Roy Soc B 280 20122909httpsdoiorg101098rspb20122909 2013

        Meredith M P Murphy E J Hawker E J King JC and Wallace M I On the interannual variability ofocean temperatures around South Georgia Southern OceanForcing by El NintildeoSouthern Oscillation and the South-ern Annular Mode Deep-Sea Res Pt II 55 2007ndash2022httpsdoiorg101016jdsr2200805020 2008

        Mo K C Relationships between low-frequency variability inthe Southern Hemisphere and sea surface temperature anoma-lies J Clim 13 3599ndash3610 httpsdoiorg1011751520-0442(2000)013lt3599rblfvigt20co2 2000

        Moline M A Claustre H Frazer T K Schofield O andVernet M Alteration of the food web along the Antarc-tic Peninsula in response to a regional warming trend GlobChange Biol 10 1973ndash1980 httpsdoiorg101111j1365-2486200400825x 2004

        Moore J K and Abbott M R Phytoplankton chloro-phyll distributions and primary production in the South-ern Ocean J Geophys Res-Ocean 105 28709ndash28722httpsdoiorg1010291999JC000043 2000

        Nakagawa S A farewell to Bonferroni the problems of low sta-tistical power and publication bias Behav Ecol 15 1044ndash1045httpsdoiorg101093behecoarh107 2004

        Nakagawa S and Cuthill I C Effect size confidence inter-val and statistical significance a practical guide for biolo-gists Biol Rev 82 591ndash605 httpsdoiorg101111j1469-185X200700027x 2007

        Nehring S Establishment of thermophilic phytoplankton speciesin the North Sea biological indicators of climatic changesShort communication ICES J Mar Sci 55 818ndash823httpsdoiorg101006jmsc19980389 1998

        NOAA Teleconnection Pattern Calculation ProceduresClimate Prediction Center Internet Team available athttpswwwcpcncepnoaagovproductsprecipCWlinkdaily_ao_indexhistorymethodshtmlvar (last access 15 June 2017)2005

        NOAA NCEP-DOE Reanalysis 2 data provided by theNOAAOARESRL PSD Boulder Colorado USA available athttpswwwcpcncepnoaagovproductsprecipCWlinkENSOverfnewaaoshtml last access 25 June 2017

        OBIS Ocean Biogeographic Information System Intergovernmen-tal Oceanographic Commission of UNESCO available at httpwwwiobisorg last access 18 February 2020

        httpsdoiorg105194bg-17-3815-2020 Biogeosciences 17 3815ndash3835 2020

        3834 B L Greaves et al SAM influences phytoplankton in SIZ

        Ottersen G Planque B Belgrano A Post E ReidP C and Stenseth N C Ecological effects of theNorth Atlantic Oscillation Oecologia 128 1ndash14httpsdoiorg101007s004420100655 2001

        Parkinson C L A 40-y record reveals gradual Antarctic sea iceincreases followed by decreases at rates far exceeding the ratesseen in the Arctic P Natl Acad Sci USA 116 14414ndash14423httpsdoiorg101073pnas1906556116 2019

        R Core Team R A Language and Environment for Statistical Com-puting R Foundation for Statistical Computing Vienna Austria2016

        Rigual-Hernaacutendez A S Trull T W Bray S G Closset Iand Armand L K Seasonal dynamics in diatom and par-ticulate export fluxes to the deep sea in the Australian sec-tor of the southern Antarctic Zone J Mar Syst 142 62ndash74httpsdoiorg101016jjmarsys201410002 2015

        Roach L A Smith M M and Dean S M Quantify-ing growth of pancake sea ice floes using images fromdrifting buoys J Geophys Res-Ocean 123 2851ndash2866httpsdoiorg1010022017JC013693 2018

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        Saenz B T and Arrigo K R Annual primary produc-tion in Antarctic sea ice during 2005-2006 from a sea icestate estimate J Geophys Res-Ocean 119 3645ndash3678httpsdoiorg1010022013JC009677 2014

        Sarthou G Timmermans K R Blain S and Treacuteguer P Growthphysiology and fate of diatoms in the ocean a review J Sea Res53 25ndash42 httpsdoiorg101016jseares200401007 2005

        Savidge G Priddle J Gilpin L C Bathmann U Murphy EJ Owens N J P Pollard R T Turner D R Veth C andBoyd P An assessment of the role of the marginal ice zone inthe carbon cycle of the Southern Ocean Antarct Sci 8 349ndash358 httpsdoiorg101017S0954102096000521 1996

        Scheffers B R De Meester L Bridge T C L HoffmannA A Pandolfi J M Corlett R T Butchart S H MPearce-Kelly P Kovacs K M Dudgeon D Pacifici MRondinini C Foden W B Martin T G Mora C Bick-ford D and Watson J E M The broad footprint of climatechange from genes to biomes to people Science 354 aaf7671httpsdoiorg101126scienceaaf7671 2016

        Schiermeier Q Atmospheric science fixing the sky Nature 460792ndash795 httpsdoiorg101038460792a 2009

        Schluumlter L Lohbeck K T Gutowska M A Groumlger J P Riebe-sell U and Reusch T B H Adaptation of a globally importantcoccolithophore to ocean warming and acidification Nat ClimChange 4 1024ndash1030 httpsdoiorg101038nclimate23792014

        Scott F J and Marchant H J (Eds) Antarctic marine protistsAustralian Biological Resources Study Canberra and HobartAustralia 541 pp httpsdoiorg101017s00322474052448192005

        Sen Gupta A and England M H Coupled oceanndashatmospherendashiceresponse to variations in the Southern Annular Mode J Clim19 4457ndash4486 httpsdoiorg101175JCLI38431 2006

        Smetacek V and Nicol S Polar ocean ecosys-tems in a changing world Nature 437 362ndash368httpsdoiorg101038nature04161 2005

        Smetacek V Are declining krill stocks a result of global warmingor of the decimation of the whales in Impacts of global warmingon polar systems Fundacioacuten BBVA edited by Duarte C MBilbao 47ndash83 2008

        Solomon S Ivy D J Kinnison D Mills M J Neely R R andSchmidt A Emergence of healing in the Antarctic ozone layerScience 353 269ndash274 httpsdoiorg101126scienceaae00612016

        Son S W Tandon N F Polvani L M and Waugh D W Ozonehole and Southern Hemisphere climate change Geophys ResLett 36 1ndash5 httpsdoiorg1010292009GL038671 2009

        Soppa M Voumllker C and Bracher A Diatom Phenol-ogy in the Southern Ocean Mean Patterns Trends andthe Role of Climate Oscillations Remote Sens 8 1ndash7httpsdoiorg103390rs8050420 2016

        Spreen G Kaleschke L and Heygster G Sea ice remote sensingusing AMSR-E 89-GHz channels J Geophys Res-Ocean 113C02S03 httpsdoiorg1010292005JC003384 2008

        Squire V A Ocean wave interactions with sea icea reappraisal Annu Rev Fluid Mech 52 37ndash60httpsdoiorg101146annurev-fluid-010719-060301 2020

        Steinacher M Joos F Froumllicher T L Bopp L Cadule PCocco V Doney S C Gehlen M Lindsay K Moore J KSchneider B and Segschneider J Projected 21st century de-crease in marine productivity a multi-model analysis Biogeo-sciences 7 979ndash1005 httpsdoiorg105194bg-7-979-20102010

        Swart N C and Fyfe J C Observed and simulated changes inthe Southern Hemisphere surface westerly wind-stress GeophysRes Lett 39 1ndash6 httpsdoiorg1010292012GL0528102012

        Swart N C Fyfe J C Gillett N and Marshall G J Compar-ing Trends in the Southern Annular Mode and Surface WesterlyJet J Clim 28 8840ndash8859 httpsdoiorg101175JCLI-D-15-03341 2015

        Swiło M Majewski W Minzoni R T and Ander-son J B Diatom assemblages from coastal settingsof West Antarctica Mar Micropaleontol 125 95ndash109httpsdoiorg101016jmarmicro201604001 2016

        Takahashi T Sutherland S C Wanninkhof R Sweeney CFeely R A Chipman D W Hales B Friederich G ChavezF Sabine C Watson A Bakker D C E Schuster U MetzlN Yoshikawa-Inoue H Ishii M Midorikawa T Nojiri YKoumlrtzinger A Steinhoff T Hoppema M Olafsson J Arnar-son T S Tilbrook B Johannessen T Olsen A Bellerby RWong C S Delille B Bates N R and de Baar H J W Cli-matological mean and decadal change in surface ocean pCO2and net seandashair CO2 flux over the global oceans Deep-Sea ResPt II 56 554ndash577 httpsdoiorg101016jdsr22008120092009

        Taljaard J J Development Distribution and Move-ment of Cyclones and Anticyclones in the South-ern Hemisphere During the IGY J Appl Me-teorol 6 973ndash987 httpsdoiorg1011751520-0450(1967)006lt0973DDAMOCgt20CO2 1967

        Taylor F and Sjunneskog C Postglacial marine diatom recordof the Palmer Deep Antarctic Peninsula (ODP Leg 178 Site1098) 2 Diatom assemblages Paleoceanography 17 1ndash12httpsdoiorg1010292000PA000564 2002

        Biogeosciences 17 3815ndash3835 2020 httpsdoiorg105194bg-17-3815-2020

        B L Greaves et al SAM influences phytoplankton in SIZ 3835

        Ter Braak C J and Verdonschot P F Canonical correspondenceanalysis and related multivariate methods in aquatic ecologyAquat Sci 57 255ndash289 httpsdoiorg101007BF008774301995

        Thompson D W Lee S and Baldwin M P Atmospheric pro-cesses governing the northern hemisphere annular modeNorthAtlantic oscillation Geoph Monog Series 134 81ndash112 2003

        Thompson D W Solomon S Kushner P J England M HGrise K M and Karoly D J Signatures of the Antarcticozone hole in Southern Hemisphere surface climate change NatGeosci 4 741ndash749 2011

        Thompson D W J and Solomon S Interpretation of RecentSouthern Hemisphere Climate Change Science 296 895ndash899httpsdoiorg101126science1069270 2002

        Tomas C R (Ed) Identifying marine phytoplankton Academicpress San Diego California 858 pp 1997

        Turner J Bracegirdle T J Phillips T Marshall G J and Hosk-ing J S An initial assessment of Antarctic sea ice extent in theCMIP5 models J Clim 26 1473ndash1484 2013

        Turner J Summerhayes C Sparrow M Mayewski P ConveyP di Prisco G Gutt J Hodgson D Speich S Worby TBo S and Klepikov A Antarctic climate change and the envi-ronment ndash 2015 update Antarctic Treaty Consultative MeetingSofia Bulgaria June 2015 IP 92 2015

        Waters R L Van Den Enden R and Marchant H J Summer mi-crobial ecology off East Antarctica (80ndash150 E) protistan com-munity structure and bacterial abundance Deep-Sea Res Pt II47 2401ndash2435 httpsdoiorg101016S0967-0645(00)00030-8 2000

        Webb T and Bryson R A Late-and postglacial climatic changein the northern Midwest USA quantitative estimates derivedfrom fossil pollen spectra by multivariate statistical analy-sis Quaternary Res 2 70ndash115 httpsdoiorg1010160033-5894(72)90005-1 1972

        Whitaker D and Christman M clustsig Significant Cluster Anal-ysis R package version 11 2014

        Wilson D L Smith Jr W O and Nelson D M Phytoplanktonbloom dynamics of the western Ross Sea ice edge ndash I Primaryproductivity and species-specific production Deep-Sea Res PtI 33 1375ndash1387 httpsdoiorg1010160198-0149(86)90041-5 1986

        Wright S W van den Enden R L Pearce I David-son A T Scott F J and Westwood K J Phyto-plankton community structure and stocks in the SouthernOcean (30ndash80 E) determined by CHEMTAX analysis ofHPLC pigment signatures Deep-Sea Res Pt II 57 758ndash778httpsdoiorg101016jdsr2200906015 2010

        httpsdoiorg105194bg-17-3815-2020 Biogeosciences 17 3815ndash3835 2020

        • Abstract
        • Introduction
          • Importance of the SIZ phytoplankton bloom
          • The Southern Annular Mode
          • The hypothesis
            • Methods
              • Phytoplankton relative abundance
              • Environmental covariates
              • Statistical analysis
                • Results
                  • The influence of the SAM on phytoplankton community composition
                  • Influence of the SAM on phytoplankton productivity
                  • Observed occurrence and abundance
                    • Discussion
                      • The SAM and phytoplankton community composition
                      • Effect of the SAM on phytoplankton taxa
                      • The effects of the SAM on productivity and biomass
                      • Implications
                        • Conclusions
                        • Data availability
                        • Supplement
                        • Author contributions
                        • Competing interests
                        • Acknowledgements
                        • Financial support
                        • Review statement
                        • References

          B L Greaves et al SAM influences phytoplankton in SIZ 3819

          numbers for each phytoplankton taxon were counted in arandom selection of captured images taken of each sam-ple Each captured image (Fig 2) represented an area of301 micromtimes 227 microm (area 0068 mm2) of each sample filterwhich was captured at a resolution of 85 pixels per microme-tre A minimum of three SEM images were assessed for eachsample with more images assessed when cell densities werelower ndash individual images were considered as incrementalincreases in the area of a sample covered and not samplingreplicates On average 387 cells were counted for each sam-ple Taxa were classified with the aid of Scott and Marchant(2005) Tomas (1997) and expert opinion Cell counts persample were converted to volume-specific abundances (cellsper mL) by dividing total counts by the number of imagesassessed multiplied by 00348 mL of seawater represented byeach captured image

          A total of 48 phytoplankton taxa were identified many tospecies level Because the diatoms Fragilariopsis curta andF cylindrus could not be reliably discriminated at the micro-scope resolution employed they were pooled into a singletaxa group Other taxa were also grouped namely Nitzschiaacicularis with N decipiens to a single group and discoidcentric diatoms of the genera Thalassiosira Actinocyclusand Porosira to another Rare species with maximum rela-tive abundance lt 2 were removed from the data prior toanalysis as they were not considered to be sufficiently abun-dant to warrant further analysis (Webb and Bryson 1972Taylor and Sjunneskog 2002 Swiło et al 2016) After pool-ing taxa and deleting rare taxa 22 taxa and taxonomic-groups (species groups of species and families) remainedto describe the composition of the phytoplankton commu-nity A total of 19 499 phytoplankton organisms were identi-fied and counted 18 878 diatoms 322 Parmales 173 coccol-ithophores 81 silicoflagellates and 45 Petasaria

          Phytoplankton abundance data were converted to relativeabundance by dividing each value by the total abundanceof the 22 taxa groups in the sample This was to alleviateany variation among samples resulting from dilution a phe-nomenon whereby the abundance of cells in surface waterscan be reduced in a matter of hours by an abrupt increase inwind speed and associated increase in the mixed layer depth(Carranza and Gille 2015) diluting near-surface cells into agreater water volume However relative abundance has thedisadvantage that blooming of one species will cause a re-duction in relative abundance of other present species whentheir absolute abundances may not have changed

          22 Environmental covariates

          Phytoplankton abundances were related to a range of envi-ronmental covariates available at the time of sampling Theseincluded the SAM sea surface temperature (SST) salinity(S) time since sea ice cover (DSSI defined below) mini-mum latitude of sea ice in the preceding winter latitude andlongitude of sample collection (LATS and LONGE respec-

          tively) the days since 1st October that a sample was collected(D) the year of sampling (Y being the year that each springndashsummer sampling season began) the time of day that a sam-ple was collected and satellite-derived total chlorophyll con-tent Macronutrient concentrations phosphate (PO4) silicate(SiO4) and nitrate+ nitrite (hereafter nitrate NOx) were in-cluded as indicators of nutrient drawdown as a proxy for phy-toplankton productivity (Arrigo et al 1999)

          We obtained daily estimates of the SAM from the USNWS Climate Prediction Center (NOAA 2017) This datasetuses the principal component method definition of the SAM(Mo 2000) rather than the simple zonal-mean normalisedpressure difference technique (Gong and Wang 1999) Weused these estimates principally because daily values werereadily available other available estimates were largely sea-sonal averages only (Ho et al 2012) Water samples for dis-solved macronutrients were collected frozen on the ship andlater analysed at the Commonwealth Scientific and IndustrialResearch Organisation in Hobart Australia using standardspectrophotometric methods (Hydes et al 2010) The vari-able DSSI was defined as the time since sea ice had meltedto 20 cover after Wright et al (2010) as determined fromdaily Special Sensor MicrowaveImager (SSMI) sea ice con-centration data distributed by the University of Hamburg(Spreen et al 2008) Total chlorophyll content was estimatedfor each sample location by estimating the total chlorophyllcontent over a 20 kmtimes 20 km area centred at each samplelocation for all available times from 31 August to 1 Mayin the year of sampling (monthly observations) (Acker andLeptoukh 2007 GMAO 2017) and interpolating betweenobservations to estimate total chlorophyll content on the datesampled (some examples are reproduced in Fig S3) By thismethod total chlorophyll was estimated for 49 of the 52 sam-ples the remainder of samples having a paucity of data whichprecluded estimation

          23 Statistical analysis

          Three statistical analyses were undertaken to explore the hy-pothesis (i) constrained analysis of principal coordinates(CAP Anderson and Willis 2003 also known as distance-based redundancy analysis Legendre and Anderson 1999)was used to estimate the influence of multiple environmentalcovariates in simultaneously explaining community compo-sition (ii) clustering techniques were used to explore similar-ities in phytoplankton community composition among sam-ples independently of environmental information to definesignificantly different groups of samples with similar phyto-plankton community composition and (iii) correlation anal-ysis was used to support observed relationships between phy-toplankton community composition and environmental co-variates

          For CAP and cluster analysis relative abundance datawere square-root-transformed to reduce possible dominanceof the analysis by a few abundant taxa The BrayndashCurtis dis-

          httpsdoiorg105194bg-17-3815-2020 Biogeosciences 17 3815ndash3835 2020

          3820 B L Greaves et al SAM influences phytoplankton in SIZ

          Figure 3 Variance in phytoplankton community composition explained by the SAM versus timing and length of the averaged range ofdaily SAM values Response surfaces relate the fraction of total variance in phytoplankton community composition attributable to the SAMversus the number of days in the range of the averaged daily SAM (vertical axis) and the timing of the centre of the range of the averageddaily SAM (horizontal axis) The horizontal axis is expressed as (a) the time through the calendar year of the middle of the range and (b) thenumber of days before a sample was collected to the middle of the range Three obvious maxima are identified with crosses (SAMautumnSAMspring and SAMprior)

          similarity index (Bray and Curtis 1957) was used to calcu-late the resemblance of samples based on their communitystructure The advantage of this index for the cell count datawas that similarity among samples was not strongly affectedby the absence of taxa

          CAP was applied to the BrayndashCurtis resemblance matrixto partition total variance in community composition into un-constrained and constrained components with the latter rep-resenting the variation due to the environmental covariatesCAP is an example of a constrained ordination method inwhich the typical samplendashspecies matrix of abundances (asused in redundancy analysis) is replaced with a symmetricmatrix of pairwise sample similarities The advantage of thisdistance-based approach to redundancy analysis is that anyecologically relevant distance measure may be used herewe use the BrayndashCurtis metric because it discounts jointabsences between samples when determining similarity Aforward selection strategy was used to choose the optimummodel containing the minimum subset of constraints requiredto explain the most variation in phytoplankton communitystructure (Legendre et al 2011) Linear projections of sig-nificant covariates were plotted as arrows in the ordinationdiagram indicating the direction and magnitude of environ-mental gradients that were correlated with changes in thephytoplankton community (Davidson et al 2016) The vari-ance in phytoplankton community structure (as determinedfrom the ordination) explained by each environmental co-variate was calculated according to the procedure outlined inTer Braak and Verdonschot (1995) and attributed to Dargie(1984) Taxa were added to the CAP plots as weighted site

          averages for each species thereby indicating the relative in-fluence of the fitted environmental constraints on each phy-toplankton taxa group

          Hierarchical agglomerative clustering based on averagelinkage was performed on the BrayndashCurtis resemblance ma-trix Significant differences among sample clusters were de-termined according to the similarity profile (SIMPROF) per-mutation method of Clarke et al (2008) based on α = 005and 1000 permutations Clustering can identify the presenceof significant differences between the community composi-tion of the samples but clustering cannot identify an effect ofthe SAM at least not directly since environmental covariatesare not included in the cluster analysis

          Pair-wise correlation analyses were performed using Pear-sonrsquos correlation coefficient r to explore the relationshipsamong environmental variables and between these environ-mental variables and the relative abundances of phytoplank-ton taxa (Rodgers and Nicewander 1988) Given the largenumber of pair-wise correlations considered we applied aBonferroni correction to give consideration to the family-wise error rate by setting alpha which is usually α = 005(Gibbons and Pratt 1975 Cohen 1990) to αm where mis the total number of correlations considered Recognisingthat αm may be conservative (Nakagawa 2004) we indi-cated when calculated correlations were significant at bothα lt 005 and at Bonferroni-corrected α lt 005m

          Response surfaces were used to display the variance ex-plained from individual CAP analyses according to the num-ber of days averaged and the mid-point (or lagged mid-point) of the range of days averaged for each aggregated

          Biogeosciences 17 3815ndash3835 2020 httpsdoiorg105194bg-17-3815-2020

          B L Greaves et al SAM influences phytoplankton in SIZ 3821

          Table 1 Variance in the community composition of 22 phytoplankton taxa groups attributable to constraining environmental covariables inthe CAP analysis

          CAP analysis Variance Covariate Variance Fraction p

          category of totalvariance

          D 061 154 lt 0001SST 057 146 lt 0001SAMautumn 052 133 lt 0001LONGE 047 119 lt 0001

          (a) Variables fit individually as SAMspring 041 103 lt 0001the only constraining covariate SAMprior 039 99 lt 0001

          DSSI 023 59 0004S 018 47 0018Y 013 34 0086LATS 010 25 0228Minimum latitude of sea ice the previous winter 006 16 0537

          Variance explained by all constraining covariables 148 375 lt 0001

          (b) Optimum Individual D 061 154 lt 0001multi-covariate constraining SAMautumn 050 126 lt 0001model covariables LONGE 021 52 lt 0001

          SAMprior 017 43 0006

          Unexplained residual 246 625 Total variance in taxa composition between samples 394 100

          SAM index These allowed identification of maxima in cor-relation between the SAM and phytoplankton communitystructure Response surfaces were derived by evaluating sep-arate CAP analyses for each combination of (i) the tempo-ral positioning of the daily-SAM averaging range and (ii) thelength of the daily-SAM averaging range In constructing theresponse surfaces the range of the averaged daily SAM wascentred on (i) each calendar day individually (1 Januaryndash31 December) through the year associated with each sam-ple and alternatively (ii) relative to the time of sampling andlagged from 1 to 365 d prior to each sample collection datein 1 d increments The length of the SAM averaging rangewas varied in 2 d increments from zero to plus and minus182 d from the centre of the range Similar response surfaceswere constructed relating the correlation between the aver-aged daily SAM and (i) total chlorophyll and (ii) [PO4]

          Data management and manipulation summary statisticscorrelation analyses and scatter plots were undertaken in Mi-crosoft Excel (2016) and R (R Core Team 2016) Clusteranalysis and SIMPROF were undertaken using the R pack-age clustsig (Whitaker and Christman 2014) CAP analyseswere conducted using the capscale function in the R packagevegan (Dixon 2003)

          3 Results

          31 The influence of the SAM on phytoplanktoncommunity composition

          CAP analysis and pairwise correlation analysis both indi-cated the presence of a relationship between the SAM andphytoplankton community composition Clustering analysisshowed there to be sufficient and systematic variation in phy-toplankton community composition between samples thatsamples could be grouped

          Empirical identification of the time between variation inthe SAM and the manifestation of this variation in the phyto-plankton community structure revealed three maxima in phy-toplankton community composition explained by the SAMThe first of the maxima was an autumn seasonal SAM in-dex (SAMautumn) which was determined to be the average of57 daily SAM estimates centred on the preceding 11 March(11 Februaryndash8 April) SAMautumn explained up to 133 of the variance in phytoplankton community composition es-timated through CAP analysis (Fig 3a Table 1a) The sec-ond of the maxima was a spring seasonal index (SAMspring)which was determined to be the average of 75 daily SAMestimates centred on 25 October (20 Septemberndash3 Decem-ber) SAMspring explained up to 103 of variance in phyto-plankton community composition (Fig 3a Table 1a) Unlikethe other maxima that were related to the time of year thethird of the maxima was timed relative to the date of sample

          httpsdoiorg105194bg-17-3815-2020 Biogeosciences 17 3815ndash3835 2020

          3822 B L Greaves et al SAM influences phytoplankton in SIZ

          Table 2 (a) Summary statistics for environmental variables (b) correlations between taxa group relative abundances and environmental vari-ables (c) correlations among environmental variables (d) correlations between macronutrient concentrations and environmental variables(e) as in (f) but involving only the 50 of samples collected latest in the springndashsummer Correlations significant at α le 005 are in italicand correlations significant after Bonferroni adjustment are also underlined (α lt 00519 for correlations among environmental variablesα lt 00520 for correlations with taxa group relative abundance)

          Environmental variables

          D SAM

          autu

          mn

          SAM

          prio

          r

          SAM

          spri

          ng

          LO

          NGE

          DSS

          I

          SST

          S Y tota

          lchl

          orop

          hyll

          (a) Statistics for environmental covariables

          Unit days index index index E days C PSU year mg mminus3

          Average 96 minus02 01 04 142 65 06 337 ndash 029Min 20 minus08 minus13 minus15 136 minus26 minus18 332 2002 007Max 151 06 20 100 148 gt 365 30 341 2012 070n 52 11 52 11 52 52 5 52 11 49Average standard error of estimate ndash 014 013 014 ndash ndash ndash ndash ndash ndash

          (b) Correlations with taxa group relative abundance

          Chaetoceros atlanticus minus015 055 057 063 020 minus001 minus020 022 013 037Chaetoceros concavicorniscurvatus 037 036 027 035 minus007 027 025 minus014 011 025Chaetoceros castracanei minus036 minus002 026 020 041 minus012 minus036 minus007 minus007 020Chaetoceros dichaeta 048 038 031 029 minus013 037 035 minus017 020 036Chaetoceros neglectus minus070 minus006 042 024 048 minus040 minus069 056 minus004 033Cylindrotheca closterium 013 009 minus010 minus003 002 032 012 002 minus011 003Dactyliosolen antarcticus 018 037 034 027 minus006 018 013 minus008 006 037Dactyliosolen tenuijunctus minus018 minus044 minus008 minus016 016 minus019 minus017 023 minus002 minus010Dictyocha speculum (silicoflagellate) minus078 minus017 030 014 068 minus041 minus075 036 minus014 017discoid centric diatoms minus057 015 006 024 052 minus011 minus057 021 minus015 021Emiliania huxleyi (haptophyte) minus028 minus038 minus042 minus038 021 012 minus025 minus001 minus037 minus024Fragilariopsis cylindruscurta 026 minus006 minus008 minus009 minus058 minus008 035 minus012 024 minus015Fragilariopsis kerguelensis 023 052 016 025 minus007 019 022 minus046 minus005 007Fragilariopsis pseudonana minus013 022 minus002 022 minus010 minus005 minus003 012 022 002Fragilariopsis rhombica 016 minus039 minus058 minus057 minus013 013 022 minus012 minus024 minus059Fragilariopsis ritscheri 011 minus010 000 minus003 minus002 002 010 minus003 003 minus001Guinardia cylindrus 009 012 minus006 minus006 005 017 010 minus003 minus002 012Nitzschia acicularisdecipiens minus047 minus045 minus029 minus031 042 minus032 minus046 009 minus022 minus019Parmales spp (chrysophyte) minus060 minus029 015 minus009 042 minus042 minus065 036 minus028 016Petasaria heterolepis minus025 minus013 minus027 minus008 015 minus017 minus025 002 minus002 minus004Pseudo-nitzschia lineola minus035 039 019 037 036 minus009 minus035 018 001 026Thalassiothrix antarctica minus016 032 012 016 015 minus011 minus011 minus019 minus015 000

          (c) Correlations among environmental variables

          SAMautumn 032SAMprior minus006 051SAMspring 004 056 083LONGE minus063 minus017 010 005DSSI 056 018 minus003 007 minus027SST 092 027 minus014 minus003 minus068 060S minus043 minus014 031 021 023 minus013 minus041Y 018 027 035 032 minus024 002 027 minus006total chlorophyll minus002 050 072 069 011 minus008 minus015 014 043

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          B L Greaves et al SAM influences phytoplankton in SIZ 3823

          Table 2 Continued

          Environmental variables

          D SAM

          autu

          mn

          SAM

          prio

          r

          SAM

          spri

          ng

          LO

          NGE

          DSS

          I

          SST

          S Y tota

          lchl

          orop

          hyll

          (d) Correlations with macronutrients (n= 51)

          [NOx ] minus 077 -039 023 004 053 minus 043 minus 072 054 minus014 012[PO4] minus 073 minus 056 minus007 minus026 062 minus 052 minus 070 039 minus013 minus010[SiO4] minus 056 minus 042 026 minus005 040 minus 049 minus 063 039 009 022

          (e) Correlations with macronutrients (n= 26 later-in-season 50 of samples)

          [NOx ] minus018 minus 058 minus005 minus025 minus023 minus019 002 027 minus017 ndash[PO4] minus013 minus 074 minus051 minus 068 009 minus031 minus001 003 minus002 ndash[SiO4] minus010 minus051 minus004 minus031 minus016 minus035 minus044 minus005 034 ndash

          Figure 4 Maxima of SAM influence on phytoplankton community composition SAMprior was determined relative to sample collection thedepicted solid line represents the average temporal location of the 97 d period and the broken lines represent the earliest and latest extent ofthe range associated with the earliest and latest samples

          collection for each sample and comprised the average of the97 daily SAM estimates centred 102 d prior to each samplecollection date It explained 99 of the variance in phy-toplankton composition (SAMprior Fig 3b Table 1a) Notethat SAMprior and SAMspring temporally overlapped to vary-ing extents across the 52 samples (Fig 4) and so were notentirely independent covariates for example a sample col-lected in the summer had previous days contributing to bothSAMprior and SAMspring

          The optimum CAP model contained four covariates thatexplained the variance in phytoplankton community com-position among samples (Table 1b) While four CAP axeswere statistically significant (p lt 005) the first two axes to-gether explained a total of 311 of the variance in phyto-plankton community composition and the third and fourthaxes together only explained a further 64 (not tabu-lated) Thus Fig 6a illustrates most of the variance explainedby the CAP analysis SAMautumn explained the most vari-ance in community composition (126 ) and SAMprior ex-plained a further 43 of variance (Table 1b) These twoSAM indices were moderately and significantly positively

          correlated (r = 051 Table 2c p lt 0001) Both showedsimilar negative correlations (Table 2b) with the relativeabundances of the small diatoms Fragilariopsis rhombica(Fig 5a) and Nitzschia acicularisdecipiens and the coc-colithophorid Emiliana huxleyi and similar positive cor-relations with the abundances of larger diatoms Chaeto-ceros atlanticus Chaetoceros dichaeta and Dactyliosolenantarcticus A further six taxa showed a correlation withSAMautumn but not SAMprior namely positive correla-tions with Chaetoceros concavicorniscurvatus Fragilari-opsis kerguelensis (Fig 5b) Pseudo-nitzschia lineola andThalassiothrix antarctica and negative correlations withDactyliosolen tenuijunctus and the Parmales Three taxashowed correlations with SAMprior but not SAMautumnnamely positive correlations with Chaetoceros neglectus andthe silicoflagellate Dictyocha speculum and a negative cor-relation with Petasaria heterolepis

          In total 15 of the 22 taxa groups showed significantpairwise correlations (p lt 005) with one or more of theSAM indices with SAMautumn being the most influential (Ta-ble 2b) showing significant correlation with 12 of the 22 taxa

          httpsdoiorg105194bg-17-3815-2020 Biogeosciences 17 3815ndash3835 2020

          3824 B L Greaves et al SAM influences phytoplankton in SIZ

          Table3Identifiedtaxa

          groupstaxataxacodecellscountedcellsm

          easuredaverageindividualcellvolum

          eabundance(averagem

          inimum

          andm

          aximum

          )averagerelative

          abundanceaverage

          totalvolumeaverage

          relativevolum

          eandpercentage

          ofsamples

          inw

          hicheach

          taxagroup

          was

          identified

          TaxonTaxa

          codeC

          ellsC

          ellsA

          verageA

          bundanceR

          elativeA

          verageA

          veragevolum

          eSam

          plescounted

          measured

          individualabundance

          totalfraction

          ofw

          ithtaxon

          cellvolume

          averagevolum

          etotalcellvolum

          e

          Average

          Min

          Max

          Num

          berN

          umber

          microm3

          cellsmLminus

          1cellsm

          Lminus

          1cellsm

          Lminus

          1microm

          3m

          Lminus

          1

          Chaetoceros

          atlanticusca

          356479

          131651

          0364

          22

          81382

          14

          90

          Chaetoceros

          castracaneicca

          4834

          9406

          038

          03

          18616

          04

          48

          Chaetoceros

          concavicorniscurvatuscc

          120200

          344320

          0135

          07

          78443

          14

          77

          Chaetoceros

          dichaetacd

          25631943

          491423

          02503

          13

          145999

          29

          94

          Chaetoceros

          neglectuscn

          634488

          17683

          0697

          35

          11906

          02

          81

          Cylindrotheca

          closteriumcyc

          12250

          12117

          079

          07

          410601

          77

          D

          actyliosolenantarcticus

          da277

          472(61

          899)44

          0195

          16

          1860

          68027

          98

          D

          actyliosolentenuijunctus

          dt1981

          13503828

          2967

          131599

          895

          36716

          100

          D

          ictyochaspeculum

          (silicoflagellate)ds

          8184

          492010

          069

          05

          99301

          15

          48

          discoidcentric

          diatoms

          dcx965

          12808572

          13312

          69652

          437

          55673

          100

          E

          miliania

          huxleyi(haptophyte)ehu

          17370

          6524

          0192

          08

          355201

          58

          Fragilariopsis

          cylindruscurtafcx

          39873013

          70632

          08796

          17

          44167

          09

          98

          Fragilariopsiskerguelensis

          fk1031

          40553748

          1670

          105458

          369

          49265

          98

          Fragilariopsis

          pseudonanafps

          170115

          35526

          0201

          09

          1899904

          69

          Fragilariopsis

          rhombica

          fr4542

          346936

          65829

          207022

          23359

          06

          100

          Fragilariopsisritscheri

          fri46

          19572

          70

          8602

          11

          02002

          35

          G

          uinardiacylindrus

          guc110

          8110

          40515

          079

          06

          225921

          41

          67

          Nitzschia

          acicularisdecipiensnix

          1133509

          251162

          0977

          57

          46705

          10

          98

          Parmales

          spp(chrysophyte)parm

          3222

          838

          0668

          17

          33400

          27

          Petasaria

          heterolepis(other)

          pet45

          ndash(65)

          70

          18703

          2667

          01

          6

          Pseudonitzschia

          lineolapsl

          681403

          109391

          4376

          41

          8446015

          100

          Thalassiothrix

          antarcticata

          112269

          (63000)

          130

          17206

          314

          42448

          85

          Biogeosciences 17 3815ndash3835 2020 httpsdoiorg105194bg-17-3815-2020

          B L Greaves et al SAM influences phytoplankton in SIZ 3825

          Figure 5 Scatter-plots (a b) examples of phytoplankton taxon relative abundance versus SAMautumn (c) LONGE of sample collectionversus D and (d) [PO4] versus SAMautumn Each figure shows r2 and p associated with the relationship A line of least-squares best fit isprovided to give an indication of trend

          groups When applying the conservative Bonferroni-adjustedα = 00025 seven taxa groups showed significant correlation(p lt 00025) with any SAM index and four with SAMautumn

          SAMprior and SAMspring represented a similar time span inthe spring immediately prior to sampling (Fig 4) and werestrongly and significantly correlated (r = 083 Table 2cp lt 0001) Samples were collected over a calendar rangeof 140 d (20 Octoberndash28 February Table 2a) and thus the97 d period represented by SAMprior varied in its positionin the calendar across the 140 d spread of the 52 samples(Fig 4) SAMprior and SAMspring also showed similar corre-lation signs with taxa group relative abundances (Table 2b)It was not possible however to determine whether the pre-season SAM influence was a spring effect or a prior-to-sampling effect and whilst both appear to be important ex-planatory terms only SAMprior was retained in the optimumCAP model (Table 1b)

          In the optimum multi-covariate CAP model D explainedthe greatest proportion of the observed variance in phyto-plankton community composition (Table 1b) D was signif-icantly correlated (p lt 00025) with SST S and DSSI andthe variable singly captured the most variation in phytoplank-ton community composition associated with seasonal suc-cession Alone it explained 154 of the total variance (Ta-

          ble 1b) with its effect on the phytoplankton community be-ing approximately orthogonal to that of the SAM (Fig 6a) Aweak positive relationship detected between SAMautumn andD indicated a weak trend of sampling later in the springndashsummer period in years with a higher autumn SAM (r =032 Table 2c p = 002) but otherwise the SAM indicesand D were un-related

          A total of 10 taxa groups showed significant correlation(p lt 005) between their relative abundance and D (Ta-ble 2b) Chaetoceros castracanei C neglectus D specu-lum E huxleyi N acicularisdecipiens Parmales P line-ola and the discoid centric diatoms showed negative relative-abundance correlations with D indicating greatest relativeabundance early in the springndashsummer while C concavicor-niscurvatus and C dichaeta showed greater relative abun-dance later in the springndashsummer A negative correlation(minus063 p lt 0001) was detected between the longitude ofindividual sample collection (LONGE) and D indicatingthat samples collected later in the springndashsummer were morelikely to have been collected towards the west in the sampledregion (Table 2c Fig 5c)

          Following cluster analysis similarity profile (SIMPROF)permutation analysis identified seven significantly differentgroups (p lt 005) with samples loosely grouped on the ba-

          httpsdoiorg105194bg-17-3815-2020 Biogeosciences 17 3815ndash3835 2020

          3826 B L Greaves et al SAM influences phytoplankton in SIZ

          Figure 6 (a) CAP analysis of phytoplankton community composition Dots represent individual samples with colours corresponding tosignificant clusters (Fig 6b) The 22 phytoplankton taxagroups are overlain as weighted averages of their sample scores (red abbreviationsafter Fig 2) with positions plotted with a 3-times-larger distance from the origin to more easily visualise their relationships with constrainingenvironmental variables Linear projections of the significant constraining environmental covariates appear as blue arrows the length andangle of which represent the magnitude and direction of influence of each variable on community composition The inset shows the taxalocated close to the origin diatoms fri and cyc collocating (b) Cluster analysis dendrogram of the 52 samples based on similarities inphytoplankton community structure using colour to show seven significantly different groups (numbered 1ndash7 solid lines α = 005) Samplelabels contain season and voyage (eg 0809v2b= austral springndashsummer over 2008ndash2009 voyage designation 2 sample b is the secondsample obtained from the SIZ during that voyage) SAMautumn value SAMprior value and the D value

          sis of their within-season successional maturity (D) and theSAM (Fig 6b) and demonstrated that there were signifi-cant differences between the community composition of thesamples The group structure determined by cluster analy-sis was displayed in the CAP ordination (using colour) todemonstrate that samples that clustered together were indeedclose to one another in the two-dimensional (2D) ordina-tion (Fig 6a) with their positioning further indicating theinfluences of D and the SAM on cluster groupings This lentconfidence that the 2D ordination was a reasonable approx-imation to the full high-dimensional structure As we knewthe values for the environmental covariates for each sam-ple it was possible to determine the correlation between the2D CAP solution and each environmental covariate We dis-played these correlations as a projected vector (arrow) wheredirection indicates the sign and length indicates strengthThis showed samples in clusters 3 and 4 (Fig 6b) were com-monly associated with a more positive SAM while those inclusters 5 6 and 7 were commonly associated with morenegative SAM values Samples in clusters 2 and 5 were com-

          monly collected earlier in the springndashsummer period (lowerD) while those in clusters 1 4 6 and 7 were commonly col-lected later (Fig 6)

          Other considered environmental covariates that did notsignificantly influence community composition were thetime of the day that a sample was collected and the mini-mum latitude reached by sea ice cover in the previous winter(Supplement Table S1)

          These analyses were also undertaken using phytoplanktonabsolute abundances rather than with relative abundances asreported above The analysis of absolute abundance showedsimilar temporal peaks in variance explained (SupplementFig S4) although it explained less variance (SAMautumn ex-plaining 109 SAMspring 91 and SAMprior 92 ) (Ta-ble S3) Individual taxa correlations with SAM indices (Ta-ble S4) showed a similar pattern to those estimated using rel-ative abundances (Table 2b)

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          B L Greaves et al SAM influences phytoplankton in SIZ 3827

          32 Influence of the SAM on phytoplanktonproductivity

          Two indicators of the influence of the SAM on phytoplank-ton productivity were obtained (i) the influence of the SAMon satellite-derived total chlorophyll and (ii) the influence ofthe SAM on macronutrient concentrations indicating nutri-ent drawdown associated with productivity Using the timesand locations of the 52 samples over the 11 years of ourstudy satellite-derived total chlorophyll showed positive cor-relation with all SAM indices r = 050 (p lt 0001) withSAMautumn r = 072 (p lt 0001) with SAMprior and r =069 (p lt 0001) with SAMspring (Table 2c) Peaks in thecorrelation of total chlorophyll with the SAM were evidentin the preceding autumn and spring and prior to sampling inresponse surfaces for NASA satellite total chlorophyll alongwith a peak in early winter (Fig S1) While further data arerequired to confirm this correlation the results obtained inthis study supported the presence of a positive relationshipbetween productivity and the SAM

          The observed concentrations of the macronutrients NOx PO4 and SiO4 showed significant negative correlationswith SAMautumn (r =minus039 minus056 minus042 respectively Ta-ble 2d p 0005 lt 0001 0002 respectively) The concen-trations of these nutrients showed stronger negative correla-tions with SAMautumn when the 50 of samples collectedlatest in the springndashsummer season was considered (r =minus058 minus074 minus051 Table 2e p 0002 lt 0001 0008respectively) Macronutrient concentrations were unrelatedto either SAMprior or SAMspring (Table 2d) Peaks in neg-ative correlation of the SAM on [PO4] were evident in thepreceding autumn and spring prior to sampling in responsesurfaces with the peaks being more negative when only the50 of samples collected later in the springndashsummer wereconsidered (Fig S2) The concentrations of macronutrientsalso showed expected decline through the springndashsummercorrelations between [NOx] [PO4] and [SiO4] withD wereminus077minus073 andminus056 respectively (Table 2d p lt 0001lt 0001 lt 0001 respectively)

          33 Observed occurrence and abundance

          Abundance of individual taxa groups averaged 133 cells permillilitre and ranged to a maximum of 8796 cells per mL (Ta-ble 3) Individual cell volume ranged from 8 microm3 for the Par-males spp to gt 60 000 microm3 for the diatoms Dactyliosolenantarcticus and Thalassiothrix antarctica Average relativeabundance ranged from 02 for the diatom Fragilariopsisritscheri to 17 for the combined taxa group Fragilariop-sis cylindruscurta Of the 22 taxa groups resolved in thisstudy four taxa groups were identified in all 52 samples and11 taxa groups were identified in more than 90 of samples(Table 3)

          4 Discussion

          41 The SAM and phytoplankton communitycomposition

          Our results show that the SAM shows a relationship withthe community composition of phytoplankton in the sea-sonal ice zone (SIZ) of the Southern Ocean (SO) This con-clusion was supported by a combination of three analyses(i) Permutation-based analyses of cluster structure demon-strated that the 52 samples were separable into seven statisti-cally different groups on the basis of community abundancecomposition of the 22 taxa groups (Fig 6b) and thus thatthere was variation between samples that might be explain-able with known environmental variables if clustering hadrevealed few or no clusters it would have been indicative oflevels of community variance (either high or low) unlikelyto be systematically explainable with the environmental vari-ables (ii) CAP analysis identified the SAM as a significantexplanatory variable on the structure of the phytoplanktoncommunity (Table 1b) and showed that groups identified incluster analysis were generally distinguished by the SAMand the D that a sample was collected (Fig 6) (iii) 15 ofthe 22 taxa groups resolved showed significant pairwise cor-relations (p lt 005) between relative abundance and at leastone of the three derived SAM indices (Table 2b)

          The derived SAM index with greatest influence on phy-toplankton community composition SAMautumn (Figs 3 4)explained 126 of the variance of phytoplankton commu-nity composition in the optimum multi-variable CAP model(Table 1b) SAMautumn represented the average SAM aroundthe time that sea ice was extending northward through theSIZ (Fig 1a) At this time phytoplankton productivity inthe SIZ would have declined to around 30 of its mid-summer maximum (Moore and Abbott 2000 Arrigo et al2008 Constable et al 2014) and phytoplankton would bepreparing for winter by variously producing energy stor-age products producing resting spores or cysts reducingmetabolic rate and engaging in heterotrophic consumptionfor energy (Fryxell 1989 McMinn and Martin 2013) Theformation of sea ice reduces available light by as much as999 (McMinn et al 1999) severely limiting light forphytoplankton for around half of each year at the rangeof longitude sampled latitude 64 S was covered in seaice for half the time across the sampled years (Fig 1a)Windier conditions associated with a more positive SAM inautumn may delay the consolidation of sea ice into largerfloes (Roach et al 2018) extending the phytoplankton grow-ing season and possibly increasing the relative abundanceof taxa that occur later in the springndashsummer season Thequantity of phytoplankton that survive the Antarctic winteris extremely low (McMinn and Martin 2013) and the abun-dance of taxa present and their metabolic condition whenthe autumn sea ice forms may strongly influence their vi-ability relative vigour and availability to seed the subse-

          httpsdoiorg105194bg-17-3815-2020 Biogeosciences 17 3815ndash3835 2020

          3828 B L Greaves et al SAM influences phytoplankton in SIZ

          quent post-winter bloom This possibility was supported bythe observation that the only two taxa groups observed tohave significantly (p lt 005) higher relative abundance laterin the springndashsummer the Chaetoceros species C dichaetaand C concavicorniscurvatus were both observed to alsoshow significantly higher relative abundances when the pre-ceding SAMautumn was more positive (Table 2b) Thus SAM-induced effects on phytoplankton in the autumn could wellinfluence the phytoplankton community structure in the fol-lowing post-winter productive season

          Extending the springndashsummer productive season by de-laying the autumn consolidation of sea ice may result inmore prolonged declines in relative abundance of taxa thatare more prolific earlier in the springndashsummer and may thusreduce the population from which the following post-winterbloom is initiated Of the eight taxa groups showing sta-tistically higher relative abundance earlier in the springndashsummer (p lt 005) three showed corresponding statisticallylower relative abundances with higher preceding SAMautumn(Emiliana huxleyi Nitzschia acicularisdecipiens and Par-males spp p lt 005 Table 2b) supporting this conjec-ture Of the remaining five taxa groups of the eight fourshowed no detectable relationship with SAMautumn and one(Pseudonitzschia lineola) showed a positive relationship

          Two other derived SAM indices were found to influencephytoplankton SAMspring and SAMprior These indices weredifficult to distinguish due to their largely overlapping timeperiods (Fig 4) and they were strongly correlated (r = 083p lt 005 Table 2c) with similar influence on taxonomicabundances (Table 2b) SAMprior was the preferred parame-ter for the multiparameter CAP model in which it explained43 of total variance Windier and stormier conditions as-sociated with a higher SAM in the months prior to sam-pling would increase nutrient input to the euphotic zone fromdeeper waters (Lovenduski and Gruber 2005) promotingproductivity whilst at the same time episodically dilutingsurface phytoplankton through deeper mixing More stormyconditions may also have brought about a faster break-upof winter sea ice promoting earlier spring phytoplanktongrowth Conversely windier conditions would also restrictstratification of the surface ocean precluding phytoplanktonbloom formation lessening productivity (Fitch and Moore2007) and reducing the abundance of early blooming taxaThis may explain the responses of Emiliania huxleyi and thecombined Nitzschia acicularisdecipiens group which bothshowed early maximum abundances (r =minus028 and minus047respectively with D p lt 005 Table 2b) and also nega-tive correlations with SAMspring and SAMprior (r =minus029to minus042 p lt 005 Table 2b) Five other taxa groups withearly maximum abundance (negative correlation with Dp lt 005) showed no detectable correlation with SAMspringand one (Pseudonitzschia lineola) showed a positive rela-tionship indicating that their abundances were determinedby environmental factors that prevail early in the season butnot those factors altered by variations in the SAM Histori-

          cally the variance in the SAM is lower in the spring quar-ter than in other quarters (NOAA 2005) perhaps explainingwhy SAMspring and SAMprior explained less variance in com-munity composition than SAMautumn

          We expected the SAM prior to sampling (SAMprior andSAMspring) would show a relationship with phytoplanktoncomposition and a lesser relationship of the SAM in thewinter is plausible because the surface of the ocean is in-sulated from atmospheric conditions by sea ice The relation-ship with the SAM the previous autumn was not expected butis also plausible as it coincides with the time when sea ice isforming and thus a critical time for phytoplankton preparingto hibernate the half-year of sea ice cover We also observeda similar relationship between SAMautumn and (i) NASAsatellite total chlorophyll and (ii) macronutrient concentra-tions across all samples as well as (iii) a stronger correla-tion with macronutrient concentrations when only the sam-ples collected in the latter half of the season were considered(Table 2c d and e respectively) We also observed maximain the autumn SAM relationship in response-surface analy-ses of the correlation between the SAM and (i) NASA satel-lite total chlorophyll and (ii) [PO4] in all samples as well as(iii) a stronger maxima with [PO4] when only the samplescollected later in the season were considered (Figs S1 andS2) Both total chlorophyll and [PO4] were observationallyindependent of the taxonomic cell counts and whilst [PO4]was estimated from parallel samples as the taxonomic analy-sis NASA satellite total chlorophyll had no material connec-tion with collected samples being linked only geographicallyand temporally and thus offers independent support for theunexpected observation that phytoplankton community com-position in the springndashsummer is related to the SAM in theprevious autumn The empirically defined SAMautumn alsoshowed significant (p lt 005) pairwise correlations with 12of the 22 taxa groups resolved (Table 2b)

          42 Effect of the SAM on phytoplankton taxa

          Nothing has been previously reported with respect to the cli-matic preferences of the majority of taxa identified in thisstudy and only 10 of the 22 taxa groups considered in ourresearch had data records in the Ocean Biogeographic In-formation System (OBIS 2020) Some of the observed taxahave been reported to show various relationships with en-vironmental factors including sea-surface temperature timethrough the season and latitude but often at the taxonomiclevel of genera rather than at a species level (Burckle et al1987 Chiba et al 2000 Waters et al 2000 Green and Sam-brotto 2006 Gomi et al 2007) We however observed dif-fering responses to environmental variables among closelyrelated taxa This was exemplified by the opposite correla-tions of Chaetoceros species C dicheata and C neglectuswith D (048 and minus070 respectively p lt 00025 Table 2b)and the opposite correlations of Fragilariopsis species Frhombica and F kerguelensis with SAMautumn (minus039 and

          Biogeosciences 17 3815ndash3835 2020 httpsdoiorg105194bg-17-3815-2020

          B L Greaves et al SAM influences phytoplankton in SIZ 3829

          052 respectively p lt 005 Table 2b Fig 5a b) The strongand opposite response to these variables by species belong-ing to the same genus indicates the importance of species-level observation in detecting subtle changes in pelagic phy-toplankton communities

          A third of analysed taxa comprising 7 taxa and 23 of all counted cells showed no detectable relationship withthe SAM This could be due to large errors associated withlow counts of rarer taxa because unaccounted variation wasmasking any relationship or because the taxa were insensi-tive to the SAM There is less chance of detecting relation-ships between taxa and environment variables when fewerindividuals are counted however some less represented taxadid show relationships with SAM indices (eg Emilianiahuxleyi |r|gt 038 Table 2b) Of the 22 taxa resolved 5showed no significant relationships with either the SAM orD All were comparatively scarce and together representedonly 2 of all cells counted Assessing species composi-tions across a greater fraction of each sample and thus count-ing more of the scarcer taxa may have revealed relationshipsbetween these rarer taxa and environmental variables (Nak-agawa and Cuthill 2007) Yet it remains possible that thesetaxa are actually unaffected by seasonal succession and theSAM instead responding to other environmental variablesthat were not measured as part of this study or that they re-main as persistent but relatively rare background taxa withrespect to the overall phytoplankton assemblage

          This is the first study to show a link between variationin the SAM and the composition of phytoplankton commu-nities in the SO although similar findings have been re-ported for other major climatic phenomena in other partsof the globe The climatically similar Northern HemisphereAnnular Mode (NAM) causes increased westerly winds anddeeper mixed layers at middle to high northern latitudes inits positive phase (Nehring 1998 Thompson et al 2003Kahru et al 2011) The NAM has been related to the tim-ing abundance and biomass of phytoplankton taxa at highnorthern latitudes (Nehring 1998 Belgrano et al 1999 Ot-tersen et al 2001 Blenckner and Hillebrand 2002) andto the delayed occurrence of maximum chlorophyll in theNorth Atlantic Summer (Kahru et al 2011) Similarly theEl NintildeondashSouthern Oscillation (ENSO) equatorial mode hasbeen shown to influence the distribution and abundance ofphytoplankton in the tropical oceans (Blanchot et al 1992)

          Phytoplankton are the pastures of the oceans and it is plau-sible that the climate in both autumn and spring influencethe phytoplankton community composition of phytoplank-ton and their ecological progression through the productivespringndashsummer period in the SIZ Climate change impactshave now been documented across every type of ecosystemon Earth (Scheffers et al 2016 Harris et al 2018) and thedistribution abundance phenology and productivity of phy-toplankton communities throughout the world are changingin response to warming acidifying and stratifying oceans(Hoegh-Guldberg and Bruno 2010) We have detected an

          association between variation in phytoplankton communitycomposition and variation in the SAM over a relatively brief11-year monitoring period despite all the other environmen-tal factors that elicit variability in phytoplankton communi-ties in the SIZ of the SO

          43 The effects of the SAM on productivity andbiomass

          A positive SAM has previously been shown to be associ-ated with increased standing stocks and productivity of phy-toplankton in the SIZ of the SO (Arrigo et al 2008 Boyce etal 2010 Soppa et al 2016) In the SIZ above the AntarcticDivergence nutrients are replenished from the deeper oceanthrough the unproductive winter and the levels of nutritionremaining at the end of summer integrate the total draw-down of nutrients by phytoplankton production over the en-tire springndashsummer growing season (Arrigo et al 1999) Weobserved this nutrient drawdown through the springndashsummeras the negative correlation between all macronutrient con-centrations and D (Table 2d) We also observed a nega-tive relationship between all macronutrient concentrations inthe springndashsummer and the previous SAMautumn (Table 2dFig 5d) suggesting that an elevated SAM in autumn leadsto greater productivity and thus greater nutrient drawdownduring the following springndashsummer The nutrient concen-trations at the end of the springndashsummer productive seasonwould be expected to best represent the total productivityover the season we observed that the correlation between nu-trient concentrations and SAMautumn were higher when onlythe 50 of samples collected later in the springndashsummerwere considered (Table 2e) further supporting the conjec-ture that a higher SAM in the autumn is linked with greaterproductivity through the following springndashsummer

          The observed positive relationship between total chloro-phyll and all the SAM indices (r = 05 to 072 p lt 00025Table 2c) and the presence of apparent spring and autumnmaxima in the response surfaces of the variance in totalchlorophyll explained by the SAM (Fig S1) further sup-port the conjecture that a more positive SAM is linked withgreater total chlorophyll and thus greater total productivityin the SIZ The total chlorophyll data considered were limitedto the 52 samples collected that is estimated for the timesand locations of each sample collection Estimates werecoarsely determined as interpolations of available monthlypredictions (Fig S3) and estimates could be thus obtainedfor only 49 of the 52 samples Yet there are indicators of re-liability in the sparse information the diatom Fragilariopsisrhombica is always relatively small (Table 3) and when therelative abundance of this taxon was high total chlorophyllwas lower (r =minus059 p lt 00025 Table 2b) and when therelative abundance of larger diatoms were high total chloro-phyll was also often high (eg Dactyliosolen antarcticusr = 037 p lt 005 Table 2b)

          httpsdoiorg105194bg-17-3815-2020 Biogeosciences 17 3815ndash3835 2020

          3830 B L Greaves et al SAM influences phytoplankton in SIZ

          44 Implications

          The SIZ is a productive region of the SO (Moore and Abbott2000) and changes to the SIZ phytoplankton communityhave potentially far-reaching implications for the ecosystemservices these organisms provide including carbon exportto the deep ocean and supporting the productivity of almostall Antarctic life Increases in the relative abundance of thelarger Chaetoceros spp diatoms would favour grazing bylarge metazooplankton especially krill (Boyd et al 1984Kawaguchi et al 1999 Moline et al 2004) which linkphytoplankton to whales seabirds seals and most higherAntarctic life forms (Smetacek 2008) Such changes wouldalso increase the efficiency of the biological pump as thelarger phytoplankton sink more rapidly than small phyto-plankton (Alldredge and Gotschalk 1989) and increasedgrazing by krill would reparcel some phytoplankton biomassinto faeces that would also sink more rapidly (Cadeacutee etal 1992) Such changes in carbon flux and trophodynam-ics would act as a negative feedback on climate change byspeeding the sequestration of carbon to the deep ocean

          The SAM is predicted to become increasingly positivein the future (Arblaster and Meehl 2006 Swart and Fyfe2012 Gillett and Fyfe 2013 Abram et al 2014 Solomonet al 2016) Our results cannot necessarily be extrapolatedto infer changes that will likely occur as the SAM contin-ues to increase as evolutionary responses can partly miti-gate adverse effects on phytoplankton of longer-term climatechange and future changes in climate are likely to imposeother co-stressors on phytoplankton inhabiting these waters(Lohbeck et al 2014 Schluumlter et al 2014 Deppeler andDavidson 2017) Our study showed that some of the vari-ation in the phytoplankton composition in the seasonal icezone was significantly related to variation in the SAM andthat the sign and magnitude of the correlation with the SAMdiffered among species

          5 Conclusions

          Statistical analyses indicated that together the autumn andspring SAM explained a higher percentage (179 ) of thevariation in phytoplankton community composition than anyvariable mostly due to the autumn SAM (up to 133 ) Intotal this exceeded the variance explained by any other vari-able even that attributable to the time of the season thatthe sample was collected (154 ) or other critical phys-ical variables such as temperature salinity and latitudeFurthermore 15 of the 22 phytoplankton taxa identified inthis study showed significant correlation with the SAM andthere were indications that a more positive SAM was relatedto increased phytoplankton productivity in the SIZ Whilethis study was limited in both timespan (11 austral springndashsummers) and the overall variance in phytoplankton compo-sition explained by all the constraining variables (375 ) it

          suggests that the phytoplankton of the SIZ are indeed sensi-tive to changes in the SAM and thus possibly responsive toclimate change

          Data availability The dataset used in this paper is available athttpsdoiorg10261795d9181f7308bd (Greaves et al 2019)

          Supplement The supplement related to this article is available on-line at httpsdoiorg105194bg-17-3815-2020-supplement

          Author contributions Author contributions BLG contributed toconceptualisation data curation formal analysis investigationmethodology software and supervision validation visualisationwriting of the original draft writing and review and editing ATDcontributed to conceptualisation funding acquisition formal anal-ysis methodology project administration resources supervisionwriting and review and editing ADF contributed to formal analy-sis methodology resources writing and review and editing JPMcontributed to formal analysis methodology software writing andreview and editing AM contributed to project administration su-pervision writing and review and editing AMcM contributed tofunding acquisition project administration resources writing andreview and editing SWM contributed to conceptualisation fund-ing acquisition formal analysis writing and review and editing

          Competing interests The authors declare that they have no conflictof interest

          Acknowledgements Sampling on Astrolabe was supported bya FrenchndashAustralian research collaboration The Institut PolaireFranccedilais Paul-Eacutemile-Victor supported access to the ship and fieldoperations The biogeochemical data collection was coordinatedby Alain Poisson and Nicolas Metzl Sorbonne Universiteacute andBronte Tilbrook CSIRO Oceans and Atmosphere Steve Rintoul(CSIRO) and Rose Morrow (LEGOS) coordinated the collection ofsalinity and temperature data The Antarctic Climate and Ecosys-tems CRC and the Integrated Marine Observing System are thankedfor supporting the operation of sensors the collection of water sam-ples and nutrient analyses reported in this study Alan Poole MattSherlock John Akl Kate Berry Lesley Clementson Brian Grif-fiths (CSIRO) Rick van den Enden Rob Johnson (AAD) and themany dedicated volunteers and shipsrsquo officers and crew are thankedfor their important contributions to the field efforts and data man-agement We thank the University of Tasmania and the AustralianAntarctic Division for the space and resources needed to undertakethis work Thanks to Nathaniel Bindoff and Simon Wotherspoon fortheir consideration of parts of the paper Thanks are due to the re-viewer Damiano Righetti for the valuable input he provided in par-ticular for pointing out ambiguities and small errors and improvingthe clarity of the paper and an anonymous reviewer for the struc-tural and theoretical considerations Total chlorophyll data used inthis paper were produced with the Giovanni online data system de-veloped and maintained by the NASA GES DISC

          Biogeosciences 17 3815ndash3835 2020 httpsdoiorg105194bg-17-3815-2020

          B L Greaves et al SAM influences phytoplankton in SIZ 3831

          Financial support This research has been supported by the Uni-versity of Tasmania (Institute of Marine and Antarctic Studies) bythe Australian Governmentrsquos Cooperative Research Centre programthrough the Antarctic Climate and Ecosystems CRC the AustralianAntarctic Division (projects 40 and 4107) and by the Australian Re-search Councilrsquos Special Research Initiative for Antarctic GatewayPartnership (project no SR140300001)

          Review statement This paper was edited by Julia Uitz and re-viewed by Damiano Righetti and one anonymous referee

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          Saenz B T and Arrigo K R Annual primary produc-tion in Antarctic sea ice during 2005-2006 from a sea icestate estimate J Geophys Res-Ocean 119 3645ndash3678httpsdoiorg1010022013JC009677 2014

          Sarthou G Timmermans K R Blain S and Treacuteguer P Growthphysiology and fate of diatoms in the ocean a review J Sea Res53 25ndash42 httpsdoiorg101016jseares200401007 2005

          Savidge G Priddle J Gilpin L C Bathmann U Murphy EJ Owens N J P Pollard R T Turner D R Veth C andBoyd P An assessment of the role of the marginal ice zone inthe carbon cycle of the Southern Ocean Antarct Sci 8 349ndash358 httpsdoiorg101017S0954102096000521 1996

          Scheffers B R De Meester L Bridge T C L HoffmannA A Pandolfi J M Corlett R T Butchart S H MPearce-Kelly P Kovacs K M Dudgeon D Pacifici MRondinini C Foden W B Martin T G Mora C Bick-ford D and Watson J E M The broad footprint of climatechange from genes to biomes to people Science 354 aaf7671httpsdoiorg101126scienceaaf7671 2016

          Schiermeier Q Atmospheric science fixing the sky Nature 460792ndash795 httpsdoiorg101038460792a 2009

          Schluumlter L Lohbeck K T Gutowska M A Groumlger J P Riebe-sell U and Reusch T B H Adaptation of a globally importantcoccolithophore to ocean warming and acidification Nat ClimChange 4 1024ndash1030 httpsdoiorg101038nclimate23792014

          Scott F J and Marchant H J (Eds) Antarctic marine protistsAustralian Biological Resources Study Canberra and HobartAustralia 541 pp httpsdoiorg101017s00322474052448192005

          Sen Gupta A and England M H Coupled oceanndashatmospherendashiceresponse to variations in the Southern Annular Mode J Clim19 4457ndash4486 httpsdoiorg101175JCLI38431 2006

          Smetacek V and Nicol S Polar ocean ecosys-tems in a changing world Nature 437 362ndash368httpsdoiorg101038nature04161 2005

          Smetacek V Are declining krill stocks a result of global warmingor of the decimation of the whales in Impacts of global warmingon polar systems Fundacioacuten BBVA edited by Duarte C MBilbao 47ndash83 2008

          Solomon S Ivy D J Kinnison D Mills M J Neely R R andSchmidt A Emergence of healing in the Antarctic ozone layerScience 353 269ndash274 httpsdoiorg101126scienceaae00612016

          Son S W Tandon N F Polvani L M and Waugh D W Ozonehole and Southern Hemisphere climate change Geophys ResLett 36 1ndash5 httpsdoiorg1010292009GL038671 2009

          Soppa M Voumllker C and Bracher A Diatom Phenol-ogy in the Southern Ocean Mean Patterns Trends andthe Role of Climate Oscillations Remote Sens 8 1ndash7httpsdoiorg103390rs8050420 2016

          Spreen G Kaleschke L and Heygster G Sea ice remote sensingusing AMSR-E 89-GHz channels J Geophys Res-Ocean 113C02S03 httpsdoiorg1010292005JC003384 2008

          Squire V A Ocean wave interactions with sea icea reappraisal Annu Rev Fluid Mech 52 37ndash60httpsdoiorg101146annurev-fluid-010719-060301 2020

          Steinacher M Joos F Froumllicher T L Bopp L Cadule PCocco V Doney S C Gehlen M Lindsay K Moore J KSchneider B and Segschneider J Projected 21st century de-crease in marine productivity a multi-model analysis Biogeo-sciences 7 979ndash1005 httpsdoiorg105194bg-7-979-20102010

          Swart N C and Fyfe J C Observed and simulated changes inthe Southern Hemisphere surface westerly wind-stress GeophysRes Lett 39 1ndash6 httpsdoiorg1010292012GL0528102012

          Swart N C Fyfe J C Gillett N and Marshall G J Compar-ing Trends in the Southern Annular Mode and Surface WesterlyJet J Clim 28 8840ndash8859 httpsdoiorg101175JCLI-D-15-03341 2015

          Swiło M Majewski W Minzoni R T and Ander-son J B Diatom assemblages from coastal settingsof West Antarctica Mar Micropaleontol 125 95ndash109httpsdoiorg101016jmarmicro201604001 2016

          Takahashi T Sutherland S C Wanninkhof R Sweeney CFeely R A Chipman D W Hales B Friederich G ChavezF Sabine C Watson A Bakker D C E Schuster U MetzlN Yoshikawa-Inoue H Ishii M Midorikawa T Nojiri YKoumlrtzinger A Steinhoff T Hoppema M Olafsson J Arnar-son T S Tilbrook B Johannessen T Olsen A Bellerby RWong C S Delille B Bates N R and de Baar H J W Cli-matological mean and decadal change in surface ocean pCO2and net seandashair CO2 flux over the global oceans Deep-Sea ResPt II 56 554ndash577 httpsdoiorg101016jdsr22008120092009

          Taljaard J J Development Distribution and Move-ment of Cyclones and Anticyclones in the South-ern Hemisphere During the IGY J Appl Me-teorol 6 973ndash987 httpsdoiorg1011751520-0450(1967)006lt0973DDAMOCgt20CO2 1967

          Taylor F and Sjunneskog C Postglacial marine diatom recordof the Palmer Deep Antarctic Peninsula (ODP Leg 178 Site1098) 2 Diatom assemblages Paleoceanography 17 1ndash12httpsdoiorg1010292000PA000564 2002

          Biogeosciences 17 3815ndash3835 2020 httpsdoiorg105194bg-17-3815-2020

          B L Greaves et al SAM influences phytoplankton in SIZ 3835

          Ter Braak C J and Verdonschot P F Canonical correspondenceanalysis and related multivariate methods in aquatic ecologyAquat Sci 57 255ndash289 httpsdoiorg101007BF008774301995

          Thompson D W Lee S and Baldwin M P Atmospheric pro-cesses governing the northern hemisphere annular modeNorthAtlantic oscillation Geoph Monog Series 134 81ndash112 2003

          Thompson D W Solomon S Kushner P J England M HGrise K M and Karoly D J Signatures of the Antarcticozone hole in Southern Hemisphere surface climate change NatGeosci 4 741ndash749 2011

          Thompson D W J and Solomon S Interpretation of RecentSouthern Hemisphere Climate Change Science 296 895ndash899httpsdoiorg101126science1069270 2002

          Tomas C R (Ed) Identifying marine phytoplankton Academicpress San Diego California 858 pp 1997

          Turner J Bracegirdle T J Phillips T Marshall G J and Hosk-ing J S An initial assessment of Antarctic sea ice extent in theCMIP5 models J Clim 26 1473ndash1484 2013

          Turner J Summerhayes C Sparrow M Mayewski P ConveyP di Prisco G Gutt J Hodgson D Speich S Worby TBo S and Klepikov A Antarctic climate change and the envi-ronment ndash 2015 update Antarctic Treaty Consultative MeetingSofia Bulgaria June 2015 IP 92 2015

          Waters R L Van Den Enden R and Marchant H J Summer mi-crobial ecology off East Antarctica (80ndash150 E) protistan com-munity structure and bacterial abundance Deep-Sea Res Pt II47 2401ndash2435 httpsdoiorg101016S0967-0645(00)00030-8 2000

          Webb T and Bryson R A Late-and postglacial climatic changein the northern Midwest USA quantitative estimates derivedfrom fossil pollen spectra by multivariate statistical analy-sis Quaternary Res 2 70ndash115 httpsdoiorg1010160033-5894(72)90005-1 1972

          Whitaker D and Christman M clustsig Significant Cluster Anal-ysis R package version 11 2014

          Wilson D L Smith Jr W O and Nelson D M Phytoplanktonbloom dynamics of the western Ross Sea ice edge ndash I Primaryproductivity and species-specific production Deep-Sea Res PtI 33 1375ndash1387 httpsdoiorg1010160198-0149(86)90041-5 1986

          Wright S W van den Enden R L Pearce I David-son A T Scott F J and Westwood K J Phyto-plankton community structure and stocks in the SouthernOcean (30ndash80 E) determined by CHEMTAX analysis ofHPLC pigment signatures Deep-Sea Res Pt II 57 758ndash778httpsdoiorg101016jdsr2200906015 2010

          httpsdoiorg105194bg-17-3815-2020 Biogeosciences 17 3815ndash3835 2020

          • Abstract
          • Introduction
            • Importance of the SIZ phytoplankton bloom
            • The Southern Annular Mode
            • The hypothesis
              • Methods
                • Phytoplankton relative abundance
                • Environmental covariates
                • Statistical analysis
                  • Results
                    • The influence of the SAM on phytoplankton community composition
                    • Influence of the SAM on phytoplankton productivity
                    • Observed occurrence and abundance
                      • Discussion
                        • The SAM and phytoplankton community composition
                        • Effect of the SAM on phytoplankton taxa
                        • The effects of the SAM on productivity and biomass
                        • Implications
                          • Conclusions
                          • Data availability
                          • Supplement
                          • Author contributions
                          • Competing interests
                          • Acknowledgements
                          • Financial support
                          • Review statement
                          • References

            3820 B L Greaves et al SAM influences phytoplankton in SIZ

            Figure 3 Variance in phytoplankton community composition explained by the SAM versus timing and length of the averaged range ofdaily SAM values Response surfaces relate the fraction of total variance in phytoplankton community composition attributable to the SAMversus the number of days in the range of the averaged daily SAM (vertical axis) and the timing of the centre of the range of the averageddaily SAM (horizontal axis) The horizontal axis is expressed as (a) the time through the calendar year of the middle of the range and (b) thenumber of days before a sample was collected to the middle of the range Three obvious maxima are identified with crosses (SAMautumnSAMspring and SAMprior)

            similarity index (Bray and Curtis 1957) was used to calcu-late the resemblance of samples based on their communitystructure The advantage of this index for the cell count datawas that similarity among samples was not strongly affectedby the absence of taxa

            CAP was applied to the BrayndashCurtis resemblance matrixto partition total variance in community composition into un-constrained and constrained components with the latter rep-resenting the variation due to the environmental covariatesCAP is an example of a constrained ordination method inwhich the typical samplendashspecies matrix of abundances (asused in redundancy analysis) is replaced with a symmetricmatrix of pairwise sample similarities The advantage of thisdistance-based approach to redundancy analysis is that anyecologically relevant distance measure may be used herewe use the BrayndashCurtis metric because it discounts jointabsences between samples when determining similarity Aforward selection strategy was used to choose the optimummodel containing the minimum subset of constraints requiredto explain the most variation in phytoplankton communitystructure (Legendre et al 2011) Linear projections of sig-nificant covariates were plotted as arrows in the ordinationdiagram indicating the direction and magnitude of environ-mental gradients that were correlated with changes in thephytoplankton community (Davidson et al 2016) The vari-ance in phytoplankton community structure (as determinedfrom the ordination) explained by each environmental co-variate was calculated according to the procedure outlined inTer Braak and Verdonschot (1995) and attributed to Dargie(1984) Taxa were added to the CAP plots as weighted site

            averages for each species thereby indicating the relative in-fluence of the fitted environmental constraints on each phy-toplankton taxa group

            Hierarchical agglomerative clustering based on averagelinkage was performed on the BrayndashCurtis resemblance ma-trix Significant differences among sample clusters were de-termined according to the similarity profile (SIMPROF) per-mutation method of Clarke et al (2008) based on α = 005and 1000 permutations Clustering can identify the presenceof significant differences between the community composi-tion of the samples but clustering cannot identify an effect ofthe SAM at least not directly since environmental covariatesare not included in the cluster analysis

            Pair-wise correlation analyses were performed using Pear-sonrsquos correlation coefficient r to explore the relationshipsamong environmental variables and between these environ-mental variables and the relative abundances of phytoplank-ton taxa (Rodgers and Nicewander 1988) Given the largenumber of pair-wise correlations considered we applied aBonferroni correction to give consideration to the family-wise error rate by setting alpha which is usually α = 005(Gibbons and Pratt 1975 Cohen 1990) to αm where mis the total number of correlations considered Recognisingthat αm may be conservative (Nakagawa 2004) we indi-cated when calculated correlations were significant at bothα lt 005 and at Bonferroni-corrected α lt 005m

            Response surfaces were used to display the variance ex-plained from individual CAP analyses according to the num-ber of days averaged and the mid-point (or lagged mid-point) of the range of days averaged for each aggregated

            Biogeosciences 17 3815ndash3835 2020 httpsdoiorg105194bg-17-3815-2020

            B L Greaves et al SAM influences phytoplankton in SIZ 3821

            Table 1 Variance in the community composition of 22 phytoplankton taxa groups attributable to constraining environmental covariables inthe CAP analysis

            CAP analysis Variance Covariate Variance Fraction p

            category of totalvariance

            D 061 154 lt 0001SST 057 146 lt 0001SAMautumn 052 133 lt 0001LONGE 047 119 lt 0001

            (a) Variables fit individually as SAMspring 041 103 lt 0001the only constraining covariate SAMprior 039 99 lt 0001

            DSSI 023 59 0004S 018 47 0018Y 013 34 0086LATS 010 25 0228Minimum latitude of sea ice the previous winter 006 16 0537

            Variance explained by all constraining covariables 148 375 lt 0001

            (b) Optimum Individual D 061 154 lt 0001multi-covariate constraining SAMautumn 050 126 lt 0001model covariables LONGE 021 52 lt 0001

            SAMprior 017 43 0006

            Unexplained residual 246 625 Total variance in taxa composition between samples 394 100

            SAM index These allowed identification of maxima in cor-relation between the SAM and phytoplankton communitystructure Response surfaces were derived by evaluating sep-arate CAP analyses for each combination of (i) the tempo-ral positioning of the daily-SAM averaging range and (ii) thelength of the daily-SAM averaging range In constructing theresponse surfaces the range of the averaged daily SAM wascentred on (i) each calendar day individually (1 Januaryndash31 December) through the year associated with each sam-ple and alternatively (ii) relative to the time of sampling andlagged from 1 to 365 d prior to each sample collection datein 1 d increments The length of the SAM averaging rangewas varied in 2 d increments from zero to plus and minus182 d from the centre of the range Similar response surfaceswere constructed relating the correlation between the aver-aged daily SAM and (i) total chlorophyll and (ii) [PO4]

            Data management and manipulation summary statisticscorrelation analyses and scatter plots were undertaken in Mi-crosoft Excel (2016) and R (R Core Team 2016) Clusteranalysis and SIMPROF were undertaken using the R pack-age clustsig (Whitaker and Christman 2014) CAP analyseswere conducted using the capscale function in the R packagevegan (Dixon 2003)

            3 Results

            31 The influence of the SAM on phytoplanktoncommunity composition

            CAP analysis and pairwise correlation analysis both indi-cated the presence of a relationship between the SAM andphytoplankton community composition Clustering analysisshowed there to be sufficient and systematic variation in phy-toplankton community composition between samples thatsamples could be grouped

            Empirical identification of the time between variation inthe SAM and the manifestation of this variation in the phyto-plankton community structure revealed three maxima in phy-toplankton community composition explained by the SAMThe first of the maxima was an autumn seasonal SAM in-dex (SAMautumn) which was determined to be the average of57 daily SAM estimates centred on the preceding 11 March(11 Februaryndash8 April) SAMautumn explained up to 133 of the variance in phytoplankton community composition es-timated through CAP analysis (Fig 3a Table 1a) The sec-ond of the maxima was a spring seasonal index (SAMspring)which was determined to be the average of 75 daily SAMestimates centred on 25 October (20 Septemberndash3 Decem-ber) SAMspring explained up to 103 of variance in phyto-plankton community composition (Fig 3a Table 1a) Unlikethe other maxima that were related to the time of year thethird of the maxima was timed relative to the date of sample

            httpsdoiorg105194bg-17-3815-2020 Biogeosciences 17 3815ndash3835 2020

            3822 B L Greaves et al SAM influences phytoplankton in SIZ

            Table 2 (a) Summary statistics for environmental variables (b) correlations between taxa group relative abundances and environmental vari-ables (c) correlations among environmental variables (d) correlations between macronutrient concentrations and environmental variables(e) as in (f) but involving only the 50 of samples collected latest in the springndashsummer Correlations significant at α le 005 are in italicand correlations significant after Bonferroni adjustment are also underlined (α lt 00519 for correlations among environmental variablesα lt 00520 for correlations with taxa group relative abundance)

            Environmental variables

            D SAM

            autu

            mn

            SAM

            prio

            r

            SAM

            spri

            ng

            LO

            NGE

            DSS

            I

            SST

            S Y tota

            lchl

            orop

            hyll

            (a) Statistics for environmental covariables

            Unit days index index index E days C PSU year mg mminus3

            Average 96 minus02 01 04 142 65 06 337 ndash 029Min 20 minus08 minus13 minus15 136 minus26 minus18 332 2002 007Max 151 06 20 100 148 gt 365 30 341 2012 070n 52 11 52 11 52 52 5 52 11 49Average standard error of estimate ndash 014 013 014 ndash ndash ndash ndash ndash ndash

            (b) Correlations with taxa group relative abundance

            Chaetoceros atlanticus minus015 055 057 063 020 minus001 minus020 022 013 037Chaetoceros concavicorniscurvatus 037 036 027 035 minus007 027 025 minus014 011 025Chaetoceros castracanei minus036 minus002 026 020 041 minus012 minus036 minus007 minus007 020Chaetoceros dichaeta 048 038 031 029 minus013 037 035 minus017 020 036Chaetoceros neglectus minus070 minus006 042 024 048 minus040 minus069 056 minus004 033Cylindrotheca closterium 013 009 minus010 minus003 002 032 012 002 minus011 003Dactyliosolen antarcticus 018 037 034 027 minus006 018 013 minus008 006 037Dactyliosolen tenuijunctus minus018 minus044 minus008 minus016 016 minus019 minus017 023 minus002 minus010Dictyocha speculum (silicoflagellate) minus078 minus017 030 014 068 minus041 minus075 036 minus014 017discoid centric diatoms minus057 015 006 024 052 minus011 minus057 021 minus015 021Emiliania huxleyi (haptophyte) minus028 minus038 minus042 minus038 021 012 minus025 minus001 minus037 minus024Fragilariopsis cylindruscurta 026 minus006 minus008 minus009 minus058 minus008 035 minus012 024 minus015Fragilariopsis kerguelensis 023 052 016 025 minus007 019 022 minus046 minus005 007Fragilariopsis pseudonana minus013 022 minus002 022 minus010 minus005 minus003 012 022 002Fragilariopsis rhombica 016 minus039 minus058 minus057 minus013 013 022 minus012 minus024 minus059Fragilariopsis ritscheri 011 minus010 000 minus003 minus002 002 010 minus003 003 minus001Guinardia cylindrus 009 012 minus006 minus006 005 017 010 minus003 minus002 012Nitzschia acicularisdecipiens minus047 minus045 minus029 minus031 042 minus032 minus046 009 minus022 minus019Parmales spp (chrysophyte) minus060 minus029 015 minus009 042 minus042 minus065 036 minus028 016Petasaria heterolepis minus025 minus013 minus027 minus008 015 minus017 minus025 002 minus002 minus004Pseudo-nitzschia lineola minus035 039 019 037 036 minus009 minus035 018 001 026Thalassiothrix antarctica minus016 032 012 016 015 minus011 minus011 minus019 minus015 000

            (c) Correlations among environmental variables

            SAMautumn 032SAMprior minus006 051SAMspring 004 056 083LONGE minus063 minus017 010 005DSSI 056 018 minus003 007 minus027SST 092 027 minus014 minus003 minus068 060S minus043 minus014 031 021 023 minus013 minus041Y 018 027 035 032 minus024 002 027 minus006total chlorophyll minus002 050 072 069 011 minus008 minus015 014 043

            Biogeosciences 17 3815ndash3835 2020 httpsdoiorg105194bg-17-3815-2020

            B L Greaves et al SAM influences phytoplankton in SIZ 3823

            Table 2 Continued

            Environmental variables

            D SAM

            autu

            mn

            SAM

            prio

            r

            SAM

            spri

            ng

            LO

            NGE

            DSS

            I

            SST

            S Y tota

            lchl

            orop

            hyll

            (d) Correlations with macronutrients (n= 51)

            [NOx ] minus 077 -039 023 004 053 minus 043 minus 072 054 minus014 012[PO4] minus 073 minus 056 minus007 minus026 062 minus 052 minus 070 039 minus013 minus010[SiO4] minus 056 minus 042 026 minus005 040 minus 049 minus 063 039 009 022

            (e) Correlations with macronutrients (n= 26 later-in-season 50 of samples)

            [NOx ] minus018 minus 058 minus005 minus025 minus023 minus019 002 027 minus017 ndash[PO4] minus013 minus 074 minus051 minus 068 009 minus031 minus001 003 minus002 ndash[SiO4] minus010 minus051 minus004 minus031 minus016 minus035 minus044 minus005 034 ndash

            Figure 4 Maxima of SAM influence on phytoplankton community composition SAMprior was determined relative to sample collection thedepicted solid line represents the average temporal location of the 97 d period and the broken lines represent the earliest and latest extent ofthe range associated with the earliest and latest samples

            collection for each sample and comprised the average of the97 daily SAM estimates centred 102 d prior to each samplecollection date It explained 99 of the variance in phy-toplankton composition (SAMprior Fig 3b Table 1a) Notethat SAMprior and SAMspring temporally overlapped to vary-ing extents across the 52 samples (Fig 4) and so were notentirely independent covariates for example a sample col-lected in the summer had previous days contributing to bothSAMprior and SAMspring

            The optimum CAP model contained four covariates thatexplained the variance in phytoplankton community com-position among samples (Table 1b) While four CAP axeswere statistically significant (p lt 005) the first two axes to-gether explained a total of 311 of the variance in phyto-plankton community composition and the third and fourthaxes together only explained a further 64 (not tabu-lated) Thus Fig 6a illustrates most of the variance explainedby the CAP analysis SAMautumn explained the most vari-ance in community composition (126 ) and SAMprior ex-plained a further 43 of variance (Table 1b) These twoSAM indices were moderately and significantly positively

            correlated (r = 051 Table 2c p lt 0001) Both showedsimilar negative correlations (Table 2b) with the relativeabundances of the small diatoms Fragilariopsis rhombica(Fig 5a) and Nitzschia acicularisdecipiens and the coc-colithophorid Emiliana huxleyi and similar positive cor-relations with the abundances of larger diatoms Chaeto-ceros atlanticus Chaetoceros dichaeta and Dactyliosolenantarcticus A further six taxa showed a correlation withSAMautumn but not SAMprior namely positive correla-tions with Chaetoceros concavicorniscurvatus Fragilari-opsis kerguelensis (Fig 5b) Pseudo-nitzschia lineola andThalassiothrix antarctica and negative correlations withDactyliosolen tenuijunctus and the Parmales Three taxashowed correlations with SAMprior but not SAMautumnnamely positive correlations with Chaetoceros neglectus andthe silicoflagellate Dictyocha speculum and a negative cor-relation with Petasaria heterolepis

            In total 15 of the 22 taxa groups showed significantpairwise correlations (p lt 005) with one or more of theSAM indices with SAMautumn being the most influential (Ta-ble 2b) showing significant correlation with 12 of the 22 taxa

            httpsdoiorg105194bg-17-3815-2020 Biogeosciences 17 3815ndash3835 2020

            3824 B L Greaves et al SAM influences phytoplankton in SIZ

            Table3Identifiedtaxa

            groupstaxataxacodecellscountedcellsm

            easuredaverageindividualcellvolum

            eabundance(averagem

            inimum

            andm

            aximum

            )averagerelative

            abundanceaverage

            totalvolumeaverage

            relativevolum

            eandpercentage

            ofsamples

            inw

            hicheach

            taxagroup

            was

            identified

            TaxonTaxa

            codeC

            ellsC

            ellsA

            verageA

            bundanceR

            elativeA

            verageA

            veragevolum

            eSam

            plescounted

            measured

            individualabundance

            totalfraction

            ofw

            ithtaxon

            cellvolume

            averagevolum

            etotalcellvolum

            e

            Average

            Min

            Max

            Num

            berN

            umber

            microm3

            cellsmLminus

            1cellsm

            Lminus

            1cellsm

            Lminus

            1microm

            3m

            Lminus

            1

            Chaetoceros

            atlanticusca

            356479

            131651

            0364

            22

            81382

            14

            90

            Chaetoceros

            castracaneicca

            4834

            9406

            038

            03

            18616

            04

            48

            Chaetoceros

            concavicorniscurvatuscc

            120200

            344320

            0135

            07

            78443

            14

            77

            Chaetoceros

            dichaetacd

            25631943

            491423

            02503

            13

            145999

            29

            94

            Chaetoceros

            neglectuscn

            634488

            17683

            0697

            35

            11906

            02

            81

            Cylindrotheca

            closteriumcyc

            12250

            12117

            079

            07

            410601

            77

            D

            actyliosolenantarcticus

            da277

            472(61

            899)44

            0195

            16

            1860

            68027

            98

            D

            actyliosolentenuijunctus

            dt1981

            13503828

            2967

            131599

            895

            36716

            100

            D

            ictyochaspeculum

            (silicoflagellate)ds

            8184

            492010

            069

            05

            99301

            15

            48

            discoidcentric

            diatoms

            dcx965

            12808572

            13312

            69652

            437

            55673

            100

            E

            miliania

            huxleyi(haptophyte)ehu

            17370

            6524

            0192

            08

            355201

            58

            Fragilariopsis

            cylindruscurtafcx

            39873013

            70632

            08796

            17

            44167

            09

            98

            Fragilariopsiskerguelensis

            fk1031

            40553748

            1670

            105458

            369

            49265

            98

            Fragilariopsis

            pseudonanafps

            170115

            35526

            0201

            09

            1899904

            69

            Fragilariopsis

            rhombica

            fr4542

            346936

            65829

            207022

            23359

            06

            100

            Fragilariopsisritscheri

            fri46

            19572

            70

            8602

            11

            02002

            35

            G

            uinardiacylindrus

            guc110

            8110

            40515

            079

            06

            225921

            41

            67

            Nitzschia

            acicularisdecipiensnix

            1133509

            251162

            0977

            57

            46705

            10

            98

            Parmales

            spp(chrysophyte)parm

            3222

            838

            0668

            17

            33400

            27

            Petasaria

            heterolepis(other)

            pet45

            ndash(65)

            70

            18703

            2667

            01

            6

            Pseudonitzschia

            lineolapsl

            681403

            109391

            4376

            41

            8446015

            100

            Thalassiothrix

            antarcticata

            112269

            (63000)

            130

            17206

            314

            42448

            85

            Biogeosciences 17 3815ndash3835 2020 httpsdoiorg105194bg-17-3815-2020

            B L Greaves et al SAM influences phytoplankton in SIZ 3825

            Figure 5 Scatter-plots (a b) examples of phytoplankton taxon relative abundance versus SAMautumn (c) LONGE of sample collectionversus D and (d) [PO4] versus SAMautumn Each figure shows r2 and p associated with the relationship A line of least-squares best fit isprovided to give an indication of trend

            groups When applying the conservative Bonferroni-adjustedα = 00025 seven taxa groups showed significant correlation(p lt 00025) with any SAM index and four with SAMautumn

            SAMprior and SAMspring represented a similar time span inthe spring immediately prior to sampling (Fig 4) and werestrongly and significantly correlated (r = 083 Table 2cp lt 0001) Samples were collected over a calendar rangeof 140 d (20 Octoberndash28 February Table 2a) and thus the97 d period represented by SAMprior varied in its positionin the calendar across the 140 d spread of the 52 samples(Fig 4) SAMprior and SAMspring also showed similar corre-lation signs with taxa group relative abundances (Table 2b)It was not possible however to determine whether the pre-season SAM influence was a spring effect or a prior-to-sampling effect and whilst both appear to be important ex-planatory terms only SAMprior was retained in the optimumCAP model (Table 1b)

            In the optimum multi-covariate CAP model D explainedthe greatest proportion of the observed variance in phyto-plankton community composition (Table 1b) D was signif-icantly correlated (p lt 00025) with SST S and DSSI andthe variable singly captured the most variation in phytoplank-ton community composition associated with seasonal suc-cession Alone it explained 154 of the total variance (Ta-

            ble 1b) with its effect on the phytoplankton community be-ing approximately orthogonal to that of the SAM (Fig 6a) Aweak positive relationship detected between SAMautumn andD indicated a weak trend of sampling later in the springndashsummer period in years with a higher autumn SAM (r =032 Table 2c p = 002) but otherwise the SAM indicesand D were un-related

            A total of 10 taxa groups showed significant correlation(p lt 005) between their relative abundance and D (Ta-ble 2b) Chaetoceros castracanei C neglectus D specu-lum E huxleyi N acicularisdecipiens Parmales P line-ola and the discoid centric diatoms showed negative relative-abundance correlations with D indicating greatest relativeabundance early in the springndashsummer while C concavicor-niscurvatus and C dichaeta showed greater relative abun-dance later in the springndashsummer A negative correlation(minus063 p lt 0001) was detected between the longitude ofindividual sample collection (LONGE) and D indicatingthat samples collected later in the springndashsummer were morelikely to have been collected towards the west in the sampledregion (Table 2c Fig 5c)

            Following cluster analysis similarity profile (SIMPROF)permutation analysis identified seven significantly differentgroups (p lt 005) with samples loosely grouped on the ba-

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            3826 B L Greaves et al SAM influences phytoplankton in SIZ

            Figure 6 (a) CAP analysis of phytoplankton community composition Dots represent individual samples with colours corresponding tosignificant clusters (Fig 6b) The 22 phytoplankton taxagroups are overlain as weighted averages of their sample scores (red abbreviationsafter Fig 2) with positions plotted with a 3-times-larger distance from the origin to more easily visualise their relationships with constrainingenvironmental variables Linear projections of the significant constraining environmental covariates appear as blue arrows the length andangle of which represent the magnitude and direction of influence of each variable on community composition The inset shows the taxalocated close to the origin diatoms fri and cyc collocating (b) Cluster analysis dendrogram of the 52 samples based on similarities inphytoplankton community structure using colour to show seven significantly different groups (numbered 1ndash7 solid lines α = 005) Samplelabels contain season and voyage (eg 0809v2b= austral springndashsummer over 2008ndash2009 voyage designation 2 sample b is the secondsample obtained from the SIZ during that voyage) SAMautumn value SAMprior value and the D value

            sis of their within-season successional maturity (D) and theSAM (Fig 6b) and demonstrated that there were signifi-cant differences between the community composition of thesamples The group structure determined by cluster analy-sis was displayed in the CAP ordination (using colour) todemonstrate that samples that clustered together were indeedclose to one another in the two-dimensional (2D) ordina-tion (Fig 6a) with their positioning further indicating theinfluences of D and the SAM on cluster groupings This lentconfidence that the 2D ordination was a reasonable approx-imation to the full high-dimensional structure As we knewthe values for the environmental covariates for each sam-ple it was possible to determine the correlation between the2D CAP solution and each environmental covariate We dis-played these correlations as a projected vector (arrow) wheredirection indicates the sign and length indicates strengthThis showed samples in clusters 3 and 4 (Fig 6b) were com-monly associated with a more positive SAM while those inclusters 5 6 and 7 were commonly associated with morenegative SAM values Samples in clusters 2 and 5 were com-

            monly collected earlier in the springndashsummer period (lowerD) while those in clusters 1 4 6 and 7 were commonly col-lected later (Fig 6)

            Other considered environmental covariates that did notsignificantly influence community composition were thetime of the day that a sample was collected and the mini-mum latitude reached by sea ice cover in the previous winter(Supplement Table S1)

            These analyses were also undertaken using phytoplanktonabsolute abundances rather than with relative abundances asreported above The analysis of absolute abundance showedsimilar temporal peaks in variance explained (SupplementFig S4) although it explained less variance (SAMautumn ex-plaining 109 SAMspring 91 and SAMprior 92 ) (Ta-ble S3) Individual taxa correlations with SAM indices (Ta-ble S4) showed a similar pattern to those estimated using rel-ative abundances (Table 2b)

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            B L Greaves et al SAM influences phytoplankton in SIZ 3827

            32 Influence of the SAM on phytoplanktonproductivity

            Two indicators of the influence of the SAM on phytoplank-ton productivity were obtained (i) the influence of the SAMon satellite-derived total chlorophyll and (ii) the influence ofthe SAM on macronutrient concentrations indicating nutri-ent drawdown associated with productivity Using the timesand locations of the 52 samples over the 11 years of ourstudy satellite-derived total chlorophyll showed positive cor-relation with all SAM indices r = 050 (p lt 0001) withSAMautumn r = 072 (p lt 0001) with SAMprior and r =069 (p lt 0001) with SAMspring (Table 2c) Peaks in thecorrelation of total chlorophyll with the SAM were evidentin the preceding autumn and spring and prior to sampling inresponse surfaces for NASA satellite total chlorophyll alongwith a peak in early winter (Fig S1) While further data arerequired to confirm this correlation the results obtained inthis study supported the presence of a positive relationshipbetween productivity and the SAM

            The observed concentrations of the macronutrients NOx PO4 and SiO4 showed significant negative correlationswith SAMautumn (r =minus039 minus056 minus042 respectively Ta-ble 2d p 0005 lt 0001 0002 respectively) The concen-trations of these nutrients showed stronger negative correla-tions with SAMautumn when the 50 of samples collectedlatest in the springndashsummer season was considered (r =minus058 minus074 minus051 Table 2e p 0002 lt 0001 0008respectively) Macronutrient concentrations were unrelatedto either SAMprior or SAMspring (Table 2d) Peaks in neg-ative correlation of the SAM on [PO4] were evident in thepreceding autumn and spring prior to sampling in responsesurfaces with the peaks being more negative when only the50 of samples collected later in the springndashsummer wereconsidered (Fig S2) The concentrations of macronutrientsalso showed expected decline through the springndashsummercorrelations between [NOx] [PO4] and [SiO4] withD wereminus077minus073 andminus056 respectively (Table 2d p lt 0001lt 0001 lt 0001 respectively)

            33 Observed occurrence and abundance

            Abundance of individual taxa groups averaged 133 cells permillilitre and ranged to a maximum of 8796 cells per mL (Ta-ble 3) Individual cell volume ranged from 8 microm3 for the Par-males spp to gt 60 000 microm3 for the diatoms Dactyliosolenantarcticus and Thalassiothrix antarctica Average relativeabundance ranged from 02 for the diatom Fragilariopsisritscheri to 17 for the combined taxa group Fragilariop-sis cylindruscurta Of the 22 taxa groups resolved in thisstudy four taxa groups were identified in all 52 samples and11 taxa groups were identified in more than 90 of samples(Table 3)

            4 Discussion

            41 The SAM and phytoplankton communitycomposition

            Our results show that the SAM shows a relationship withthe community composition of phytoplankton in the sea-sonal ice zone (SIZ) of the Southern Ocean (SO) This con-clusion was supported by a combination of three analyses(i) Permutation-based analyses of cluster structure demon-strated that the 52 samples were separable into seven statisti-cally different groups on the basis of community abundancecomposition of the 22 taxa groups (Fig 6b) and thus thatthere was variation between samples that might be explain-able with known environmental variables if clustering hadrevealed few or no clusters it would have been indicative oflevels of community variance (either high or low) unlikelyto be systematically explainable with the environmental vari-ables (ii) CAP analysis identified the SAM as a significantexplanatory variable on the structure of the phytoplanktoncommunity (Table 1b) and showed that groups identified incluster analysis were generally distinguished by the SAMand the D that a sample was collected (Fig 6) (iii) 15 ofthe 22 taxa groups resolved showed significant pairwise cor-relations (p lt 005) between relative abundance and at leastone of the three derived SAM indices (Table 2b)

            The derived SAM index with greatest influence on phy-toplankton community composition SAMautumn (Figs 3 4)explained 126 of the variance of phytoplankton commu-nity composition in the optimum multi-variable CAP model(Table 1b) SAMautumn represented the average SAM aroundthe time that sea ice was extending northward through theSIZ (Fig 1a) At this time phytoplankton productivity inthe SIZ would have declined to around 30 of its mid-summer maximum (Moore and Abbott 2000 Arrigo et al2008 Constable et al 2014) and phytoplankton would bepreparing for winter by variously producing energy stor-age products producing resting spores or cysts reducingmetabolic rate and engaging in heterotrophic consumptionfor energy (Fryxell 1989 McMinn and Martin 2013) Theformation of sea ice reduces available light by as much as999 (McMinn et al 1999) severely limiting light forphytoplankton for around half of each year at the rangeof longitude sampled latitude 64 S was covered in seaice for half the time across the sampled years (Fig 1a)Windier conditions associated with a more positive SAM inautumn may delay the consolidation of sea ice into largerfloes (Roach et al 2018) extending the phytoplankton grow-ing season and possibly increasing the relative abundanceof taxa that occur later in the springndashsummer season Thequantity of phytoplankton that survive the Antarctic winteris extremely low (McMinn and Martin 2013) and the abun-dance of taxa present and their metabolic condition whenthe autumn sea ice forms may strongly influence their vi-ability relative vigour and availability to seed the subse-

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            3828 B L Greaves et al SAM influences phytoplankton in SIZ

            quent post-winter bloom This possibility was supported bythe observation that the only two taxa groups observed tohave significantly (p lt 005) higher relative abundance laterin the springndashsummer the Chaetoceros species C dichaetaand C concavicorniscurvatus were both observed to alsoshow significantly higher relative abundances when the pre-ceding SAMautumn was more positive (Table 2b) Thus SAM-induced effects on phytoplankton in the autumn could wellinfluence the phytoplankton community structure in the fol-lowing post-winter productive season

            Extending the springndashsummer productive season by de-laying the autumn consolidation of sea ice may result inmore prolonged declines in relative abundance of taxa thatare more prolific earlier in the springndashsummer and may thusreduce the population from which the following post-winterbloom is initiated Of the eight taxa groups showing sta-tistically higher relative abundance earlier in the springndashsummer (p lt 005) three showed corresponding statisticallylower relative abundances with higher preceding SAMautumn(Emiliana huxleyi Nitzschia acicularisdecipiens and Par-males spp p lt 005 Table 2b) supporting this conjec-ture Of the remaining five taxa groups of the eight fourshowed no detectable relationship with SAMautumn and one(Pseudonitzschia lineola) showed a positive relationship

            Two other derived SAM indices were found to influencephytoplankton SAMspring and SAMprior These indices weredifficult to distinguish due to their largely overlapping timeperiods (Fig 4) and they were strongly correlated (r = 083p lt 005 Table 2c) with similar influence on taxonomicabundances (Table 2b) SAMprior was the preferred parame-ter for the multiparameter CAP model in which it explained43 of total variance Windier and stormier conditions as-sociated with a higher SAM in the months prior to sam-pling would increase nutrient input to the euphotic zone fromdeeper waters (Lovenduski and Gruber 2005) promotingproductivity whilst at the same time episodically dilutingsurface phytoplankton through deeper mixing More stormyconditions may also have brought about a faster break-upof winter sea ice promoting earlier spring phytoplanktongrowth Conversely windier conditions would also restrictstratification of the surface ocean precluding phytoplanktonbloom formation lessening productivity (Fitch and Moore2007) and reducing the abundance of early blooming taxaThis may explain the responses of Emiliania huxleyi and thecombined Nitzschia acicularisdecipiens group which bothshowed early maximum abundances (r =minus028 and minus047respectively with D p lt 005 Table 2b) and also nega-tive correlations with SAMspring and SAMprior (r =minus029to minus042 p lt 005 Table 2b) Five other taxa groups withearly maximum abundance (negative correlation with Dp lt 005) showed no detectable correlation with SAMspringand one (Pseudonitzschia lineola) showed a positive rela-tionship indicating that their abundances were determinedby environmental factors that prevail early in the season butnot those factors altered by variations in the SAM Histori-

            cally the variance in the SAM is lower in the spring quar-ter than in other quarters (NOAA 2005) perhaps explainingwhy SAMspring and SAMprior explained less variance in com-munity composition than SAMautumn

            We expected the SAM prior to sampling (SAMprior andSAMspring) would show a relationship with phytoplanktoncomposition and a lesser relationship of the SAM in thewinter is plausible because the surface of the ocean is in-sulated from atmospheric conditions by sea ice The relation-ship with the SAM the previous autumn was not expected butis also plausible as it coincides with the time when sea ice isforming and thus a critical time for phytoplankton preparingto hibernate the half-year of sea ice cover We also observeda similar relationship between SAMautumn and (i) NASAsatellite total chlorophyll and (ii) macronutrient concentra-tions across all samples as well as (iii) a stronger correla-tion with macronutrient concentrations when only the sam-ples collected in the latter half of the season were considered(Table 2c d and e respectively) We also observed maximain the autumn SAM relationship in response-surface analy-ses of the correlation between the SAM and (i) NASA satel-lite total chlorophyll and (ii) [PO4] in all samples as well as(iii) a stronger maxima with [PO4] when only the samplescollected later in the season were considered (Figs S1 andS2) Both total chlorophyll and [PO4] were observationallyindependent of the taxonomic cell counts and whilst [PO4]was estimated from parallel samples as the taxonomic analy-sis NASA satellite total chlorophyll had no material connec-tion with collected samples being linked only geographicallyand temporally and thus offers independent support for theunexpected observation that phytoplankton community com-position in the springndashsummer is related to the SAM in theprevious autumn The empirically defined SAMautumn alsoshowed significant (p lt 005) pairwise correlations with 12of the 22 taxa groups resolved (Table 2b)

            42 Effect of the SAM on phytoplankton taxa

            Nothing has been previously reported with respect to the cli-matic preferences of the majority of taxa identified in thisstudy and only 10 of the 22 taxa groups considered in ourresearch had data records in the Ocean Biogeographic In-formation System (OBIS 2020) Some of the observed taxahave been reported to show various relationships with en-vironmental factors including sea-surface temperature timethrough the season and latitude but often at the taxonomiclevel of genera rather than at a species level (Burckle et al1987 Chiba et al 2000 Waters et al 2000 Green and Sam-brotto 2006 Gomi et al 2007) We however observed dif-fering responses to environmental variables among closelyrelated taxa This was exemplified by the opposite correla-tions of Chaetoceros species C dicheata and C neglectuswith D (048 and minus070 respectively p lt 00025 Table 2b)and the opposite correlations of Fragilariopsis species Frhombica and F kerguelensis with SAMautumn (minus039 and

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            B L Greaves et al SAM influences phytoplankton in SIZ 3829

            052 respectively p lt 005 Table 2b Fig 5a b) The strongand opposite response to these variables by species belong-ing to the same genus indicates the importance of species-level observation in detecting subtle changes in pelagic phy-toplankton communities

            A third of analysed taxa comprising 7 taxa and 23 of all counted cells showed no detectable relationship withthe SAM This could be due to large errors associated withlow counts of rarer taxa because unaccounted variation wasmasking any relationship or because the taxa were insensi-tive to the SAM There is less chance of detecting relation-ships between taxa and environment variables when fewerindividuals are counted however some less represented taxadid show relationships with SAM indices (eg Emilianiahuxleyi |r|gt 038 Table 2b) Of the 22 taxa resolved 5showed no significant relationships with either the SAM orD All were comparatively scarce and together representedonly 2 of all cells counted Assessing species composi-tions across a greater fraction of each sample and thus count-ing more of the scarcer taxa may have revealed relationshipsbetween these rarer taxa and environmental variables (Nak-agawa and Cuthill 2007) Yet it remains possible that thesetaxa are actually unaffected by seasonal succession and theSAM instead responding to other environmental variablesthat were not measured as part of this study or that they re-main as persistent but relatively rare background taxa withrespect to the overall phytoplankton assemblage

            This is the first study to show a link between variationin the SAM and the composition of phytoplankton commu-nities in the SO although similar findings have been re-ported for other major climatic phenomena in other partsof the globe The climatically similar Northern HemisphereAnnular Mode (NAM) causes increased westerly winds anddeeper mixed layers at middle to high northern latitudes inits positive phase (Nehring 1998 Thompson et al 2003Kahru et al 2011) The NAM has been related to the tim-ing abundance and biomass of phytoplankton taxa at highnorthern latitudes (Nehring 1998 Belgrano et al 1999 Ot-tersen et al 2001 Blenckner and Hillebrand 2002) andto the delayed occurrence of maximum chlorophyll in theNorth Atlantic Summer (Kahru et al 2011) Similarly theEl NintildeondashSouthern Oscillation (ENSO) equatorial mode hasbeen shown to influence the distribution and abundance ofphytoplankton in the tropical oceans (Blanchot et al 1992)

            Phytoplankton are the pastures of the oceans and it is plau-sible that the climate in both autumn and spring influencethe phytoplankton community composition of phytoplank-ton and their ecological progression through the productivespringndashsummer period in the SIZ Climate change impactshave now been documented across every type of ecosystemon Earth (Scheffers et al 2016 Harris et al 2018) and thedistribution abundance phenology and productivity of phy-toplankton communities throughout the world are changingin response to warming acidifying and stratifying oceans(Hoegh-Guldberg and Bruno 2010) We have detected an

            association between variation in phytoplankton communitycomposition and variation in the SAM over a relatively brief11-year monitoring period despite all the other environmen-tal factors that elicit variability in phytoplankton communi-ties in the SIZ of the SO

            43 The effects of the SAM on productivity andbiomass

            A positive SAM has previously been shown to be associ-ated with increased standing stocks and productivity of phy-toplankton in the SIZ of the SO (Arrigo et al 2008 Boyce etal 2010 Soppa et al 2016) In the SIZ above the AntarcticDivergence nutrients are replenished from the deeper oceanthrough the unproductive winter and the levels of nutritionremaining at the end of summer integrate the total draw-down of nutrients by phytoplankton production over the en-tire springndashsummer growing season (Arrigo et al 1999) Weobserved this nutrient drawdown through the springndashsummeras the negative correlation between all macronutrient con-centrations and D (Table 2d) We also observed a nega-tive relationship between all macronutrient concentrations inthe springndashsummer and the previous SAMautumn (Table 2dFig 5d) suggesting that an elevated SAM in autumn leadsto greater productivity and thus greater nutrient drawdownduring the following springndashsummer The nutrient concen-trations at the end of the springndashsummer productive seasonwould be expected to best represent the total productivityover the season we observed that the correlation between nu-trient concentrations and SAMautumn were higher when onlythe 50 of samples collected later in the springndashsummerwere considered (Table 2e) further supporting the conjec-ture that a higher SAM in the autumn is linked with greaterproductivity through the following springndashsummer

            The observed positive relationship between total chloro-phyll and all the SAM indices (r = 05 to 072 p lt 00025Table 2c) and the presence of apparent spring and autumnmaxima in the response surfaces of the variance in totalchlorophyll explained by the SAM (Fig S1) further sup-port the conjecture that a more positive SAM is linked withgreater total chlorophyll and thus greater total productivityin the SIZ The total chlorophyll data considered were limitedto the 52 samples collected that is estimated for the timesand locations of each sample collection Estimates werecoarsely determined as interpolations of available monthlypredictions (Fig S3) and estimates could be thus obtainedfor only 49 of the 52 samples Yet there are indicators of re-liability in the sparse information the diatom Fragilariopsisrhombica is always relatively small (Table 3) and when therelative abundance of this taxon was high total chlorophyllwas lower (r =minus059 p lt 00025 Table 2b) and when therelative abundance of larger diatoms were high total chloro-phyll was also often high (eg Dactyliosolen antarcticusr = 037 p lt 005 Table 2b)

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            3830 B L Greaves et al SAM influences phytoplankton in SIZ

            44 Implications

            The SIZ is a productive region of the SO (Moore and Abbott2000) and changes to the SIZ phytoplankton communityhave potentially far-reaching implications for the ecosystemservices these organisms provide including carbon exportto the deep ocean and supporting the productivity of almostall Antarctic life Increases in the relative abundance of thelarger Chaetoceros spp diatoms would favour grazing bylarge metazooplankton especially krill (Boyd et al 1984Kawaguchi et al 1999 Moline et al 2004) which linkphytoplankton to whales seabirds seals and most higherAntarctic life forms (Smetacek 2008) Such changes wouldalso increase the efficiency of the biological pump as thelarger phytoplankton sink more rapidly than small phyto-plankton (Alldredge and Gotschalk 1989) and increasedgrazing by krill would reparcel some phytoplankton biomassinto faeces that would also sink more rapidly (Cadeacutee etal 1992) Such changes in carbon flux and trophodynam-ics would act as a negative feedback on climate change byspeeding the sequestration of carbon to the deep ocean

            The SAM is predicted to become increasingly positivein the future (Arblaster and Meehl 2006 Swart and Fyfe2012 Gillett and Fyfe 2013 Abram et al 2014 Solomonet al 2016) Our results cannot necessarily be extrapolatedto infer changes that will likely occur as the SAM contin-ues to increase as evolutionary responses can partly miti-gate adverse effects on phytoplankton of longer-term climatechange and future changes in climate are likely to imposeother co-stressors on phytoplankton inhabiting these waters(Lohbeck et al 2014 Schluumlter et al 2014 Deppeler andDavidson 2017) Our study showed that some of the vari-ation in the phytoplankton composition in the seasonal icezone was significantly related to variation in the SAM andthat the sign and magnitude of the correlation with the SAMdiffered among species

            5 Conclusions

            Statistical analyses indicated that together the autumn andspring SAM explained a higher percentage (179 ) of thevariation in phytoplankton community composition than anyvariable mostly due to the autumn SAM (up to 133 ) Intotal this exceeded the variance explained by any other vari-able even that attributable to the time of the season thatthe sample was collected (154 ) or other critical phys-ical variables such as temperature salinity and latitudeFurthermore 15 of the 22 phytoplankton taxa identified inthis study showed significant correlation with the SAM andthere were indications that a more positive SAM was relatedto increased phytoplankton productivity in the SIZ Whilethis study was limited in both timespan (11 austral springndashsummers) and the overall variance in phytoplankton compo-sition explained by all the constraining variables (375 ) it

            suggests that the phytoplankton of the SIZ are indeed sensi-tive to changes in the SAM and thus possibly responsive toclimate change

            Data availability The dataset used in this paper is available athttpsdoiorg10261795d9181f7308bd (Greaves et al 2019)

            Supplement The supplement related to this article is available on-line at httpsdoiorg105194bg-17-3815-2020-supplement

            Author contributions Author contributions BLG contributed toconceptualisation data curation formal analysis investigationmethodology software and supervision validation visualisationwriting of the original draft writing and review and editing ATDcontributed to conceptualisation funding acquisition formal anal-ysis methodology project administration resources supervisionwriting and review and editing ADF contributed to formal analy-sis methodology resources writing and review and editing JPMcontributed to formal analysis methodology software writing andreview and editing AM contributed to project administration su-pervision writing and review and editing AMcM contributed tofunding acquisition project administration resources writing andreview and editing SWM contributed to conceptualisation fund-ing acquisition formal analysis writing and review and editing

            Competing interests The authors declare that they have no conflictof interest

            Acknowledgements Sampling on Astrolabe was supported bya FrenchndashAustralian research collaboration The Institut PolaireFranccedilais Paul-Eacutemile-Victor supported access to the ship and fieldoperations The biogeochemical data collection was coordinatedby Alain Poisson and Nicolas Metzl Sorbonne Universiteacute andBronte Tilbrook CSIRO Oceans and Atmosphere Steve Rintoul(CSIRO) and Rose Morrow (LEGOS) coordinated the collection ofsalinity and temperature data The Antarctic Climate and Ecosys-tems CRC and the Integrated Marine Observing System are thankedfor supporting the operation of sensors the collection of water sam-ples and nutrient analyses reported in this study Alan Poole MattSherlock John Akl Kate Berry Lesley Clementson Brian Grif-fiths (CSIRO) Rick van den Enden Rob Johnson (AAD) and themany dedicated volunteers and shipsrsquo officers and crew are thankedfor their important contributions to the field efforts and data man-agement We thank the University of Tasmania and the AustralianAntarctic Division for the space and resources needed to undertakethis work Thanks to Nathaniel Bindoff and Simon Wotherspoon fortheir consideration of parts of the paper Thanks are due to the re-viewer Damiano Righetti for the valuable input he provided in par-ticular for pointing out ambiguities and small errors and improvingthe clarity of the paper and an anonymous reviewer for the struc-tural and theoretical considerations Total chlorophyll data used inthis paper were produced with the Giovanni online data system de-veloped and maintained by the NASA GES DISC

            Biogeosciences 17 3815ndash3835 2020 httpsdoiorg105194bg-17-3815-2020

            B L Greaves et al SAM influences phytoplankton in SIZ 3831

            Financial support This research has been supported by the Uni-versity of Tasmania (Institute of Marine and Antarctic Studies) bythe Australian Governmentrsquos Cooperative Research Centre programthrough the Antarctic Climate and Ecosystems CRC the AustralianAntarctic Division (projects 40 and 4107) and by the Australian Re-search Councilrsquos Special Research Initiative for Antarctic GatewayPartnership (project no SR140300001)

            Review statement This paper was edited by Julia Uitz and re-viewed by Damiano Righetti and one anonymous referee

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            3832 B L Greaves et al SAM influences phytoplankton in SIZ

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            Davidson A T McKinlay J Westwood K Thomson P Gvan den Enden R de Salas M Wright S Johnson R andBerry K Enhanced CO2 concentrations change the structure ofAntarctic marine microbial communities Mar Ecol Prog Ser552 93ndash113 httpsdoiorg103354meps11742 2016

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            Greaves B L Davidson A T and Fraser A D The SouthernAnnular Mode (SAM) influences phytoplankton communities inthe seasonal ice zone of the Southern Ocean Ver 1 Australian

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            Hall A and Visbeck M Synchronous variabil-ity in the Southern Hemisphere atmosphere seaice and ocean resulting from the annular mode JClim 15 3043ndash3057 httpsdoiorg1011751520-0442(2002)015lt3043SVITSHgt20CO2 2002

            Harris R M B Beaumont L J Vance T R Tozer C R Re-menyi T A Perkins-Kirkpatrick S E Mitchell PJ NicotraAB McGregor S Andrew NR Letnic M Kearney M RWernberg T Hutley L B Chambers L E Fletcher M-SKeatley M R Woodward C A Williamson G Duke N Cand Bowman D M J S Biological responses to the press andpulse of climate trends and extreme events Nat Clim Change8 579ndash587 httpsdoiorg101038s41558-018-0187-9 2018

            Henson S A Yool A and Sanders R Variabilityin efficiency of particulate organic carbon export Amodel study Global Biogeochem Cy 29 33ndash45httpsdoiorg1010022014GB004965 2015

            Hines K M Bromwich D H and Marshall G J Ar-tificial surface pressure trends in the NCEP-NCAR re-analysis over the Southern Ocean and Antartica JClim 13 3940ndash3952 httpsdoiorg1011751520-0442(2000)013lt3940ASPTITgt20CO2 2000

            Ho M Kiem A S and Verdon-Kidd D C The Southern An-nular Mode a comparison of indices Hydrol Earth Syst Sci16 967ndash982 httpshttpsdoiorg105194hess-16-967-20122012

            Hoegh-Guldberg O and Bruno J F The impact of climate changeon the worldrsquos marine ecosystems Science 328 1523ndash1528httpsdoiorg101126science1189930 2010

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            Kahru M Brotas V Manzano-Sarabia M and Mitchell B GAre phytoplankton blooms occurring earlier in the Arctic GlobChange Biol 17 1733ndash1739 httpsdoiorg101111j1365-2486201002312x 2011

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            Kwok R and Comiso J C Southern Ocean climate andsea ice anomalies associated with the Southern Oscilla-tion J Clim 15 487ndash501 httpsdoiorg1011751520-0442(2002)015lt0487SOCASIgt20CO2 2002

            Lampitt R S and Antia A N Particle flux in deep seas Regionalcharacteristics and temporal variability Deep-Sea Res Pt I44 1377ndash1403 httpsdoiorg101016S0967-0637(97)00020-4 1997

            Lannuzel D Schoemann V de Jong J Tison J L andChou L Distribution and biogeochemical behaviour of ironin the East Antarctic sea ice Mar Chem 106 18ndash32httpsdoiorg101016jmarchem200606010 2007

            Lefebvre W Goosse H Timmermann R and FichefetT Influence of the Southern Annular Mode on the seaice-ocean system J Geophys Res-Ocean 109 1ndash12httpsdoiorg1010292004JC002403 2004

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            Legendre P Oksanen J and ter Braak C J Testing thesignificance of canonical axes in redundancy analysis Meth-ods Ecol Evol 2 269ndash277 httpsdoiorg101111j2041-210X201000078x 2011

            Lenton A and Matear R J Role of the Southern Annular Mode(SAM) in Southern Ocean CO2 uptake Global Biogeochem Cy21 1-17 httpsdoiorg1010292006GB002714 2007

            Lohbeck K T Riebesell U and Reusch T B H Gene expres-sion changes in the coccolithophore Emiliania huxleyi after 500generations of selection to ocean acidification P Roy Soc B281 1ndash7 httpsdoiorg101098rspb20140003 2014

            Lovenduski N S Gruber N Doney S C and Lima I D En-hanced CO2 outgassing in the Southern Ocean from a positivephase of the Southern Annular Mode Global Biogeochem Cy21 1ndash14 httpsdoiorg1010292006GB002900 2007

            Lovenduski N S and Gruber N Impact of the Southern AnnularMode on Southern Ocean circulation and biology Geophys ResLett 32 1ndash4 httpsdoiorg1010292005GL022727 2005

            Mackas D L Does blending of chlorophylldata bias temporal trend Nature 472 E4ndashE5httpsdoiorg101038nature09951 2011

            Mackintosh A N Anderson B M Lorrey A M Renwick JA Frei P and Dean S M Regional cooling caused recentNew Zealand glacier advances in a period of global warmingNat Commun 8 1ndash13 httpsdoiorg101038ncomms142022017

            Marshall G J Trends in the Southern Annu-lar Mode from Observations and Reanalyses JClim 16 4134ndash4143 httpsdoiorg1011751520-0442(2003)016lt4134TITSAMgt20CO2 2003

            Marshall G J Half-century seasonal relationships between theSouthern Annular mode and Antarctic temperatures Int J Cli-matol 27 373ndash383 httpsdoiorg101002joc1407 2007

            Martin A McMinn A Heath M Hegseth E N and Ryan KG The physiological response to increased temperature in over-wintering sea ice algae and phytoplankton in McMurdo SoundAntarctica and Tromsoslash Sound Norway J Exp Mar Biol Ecol428 57ndash66 httpsdoiorg101016jjembe201206006 2012

            Massom R A and Stammerjohn S E Antarctic sea ice changeand variability ndash Physical and ecological implications Polar Sci4 149ndash186 httpsdoiorg101016jpolar201005001 2010

            McMinn A Ashworth C and Ryan K Growth and Productivityof Antarctic Sea Ice Algae under PAR and UV Irradiances BotMar 42 401ndash407 httpsdoiorg101515BOT1999046 1999

            McMinn A and Martin A Dark survival in awarming world P Roy Soc B 280 20122909httpsdoiorg101098rspb20122909 2013

            Meredith M P Murphy E J Hawker E J King JC and Wallace M I On the interannual variability ofocean temperatures around South Georgia Southern OceanForcing by El NintildeoSouthern Oscillation and the South-ern Annular Mode Deep-Sea Res Pt II 55 2007ndash2022httpsdoiorg101016jdsr2200805020 2008

            Mo K C Relationships between low-frequency variability inthe Southern Hemisphere and sea surface temperature anoma-lies J Clim 13 3599ndash3610 httpsdoiorg1011751520-0442(2000)013lt3599rblfvigt20co2 2000

            Moline M A Claustre H Frazer T K Schofield O andVernet M Alteration of the food web along the Antarc-tic Peninsula in response to a regional warming trend GlobChange Biol 10 1973ndash1980 httpsdoiorg101111j1365-2486200400825x 2004

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            Nakagawa S and Cuthill I C Effect size confidence inter-val and statistical significance a practical guide for biolo-gists Biol Rev 82 591ndash605 httpsdoiorg101111j1469-185X200700027x 2007

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            NOAA Teleconnection Pattern Calculation ProceduresClimate Prediction Center Internet Team available athttpswwwcpcncepnoaagovproductsprecipCWlinkdaily_ao_indexhistorymethodshtmlvar (last access 15 June 2017)2005

            NOAA NCEP-DOE Reanalysis 2 data provided by theNOAAOARESRL PSD Boulder Colorado USA available athttpswwwcpcncepnoaagovproductsprecipCWlinkENSOverfnewaaoshtml last access 25 June 2017

            OBIS Ocean Biogeographic Information System Intergovernmen-tal Oceanographic Commission of UNESCO available at httpwwwiobisorg last access 18 February 2020

            httpsdoiorg105194bg-17-3815-2020 Biogeosciences 17 3815ndash3835 2020

            3834 B L Greaves et al SAM influences phytoplankton in SIZ

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            Parkinson C L A 40-y record reveals gradual Antarctic sea iceincreases followed by decreases at rates far exceeding the ratesseen in the Arctic P Natl Acad Sci USA 116 14414ndash14423httpsdoiorg101073pnas1906556116 2019

            R Core Team R A Language and Environment for Statistical Com-puting R Foundation for Statistical Computing Vienna Austria2016

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            Roach L A Smith M M and Dean S M Quantify-ing growth of pancake sea ice floes using images fromdrifting buoys J Geophys Res-Ocean 123 2851ndash2866httpsdoiorg1010022017JC013693 2018

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            Savidge G Priddle J Gilpin L C Bathmann U Murphy EJ Owens N J P Pollard R T Turner D R Veth C andBoyd P An assessment of the role of the marginal ice zone inthe carbon cycle of the Southern Ocean Antarct Sci 8 349ndash358 httpsdoiorg101017S0954102096000521 1996

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            Schiermeier Q Atmospheric science fixing the sky Nature 460792ndash795 httpsdoiorg101038460792a 2009

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            Sen Gupta A and England M H Coupled oceanndashatmospherendashiceresponse to variations in the Southern Annular Mode J Clim19 4457ndash4486 httpsdoiorg101175JCLI38431 2006

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            Solomon S Ivy D J Kinnison D Mills M J Neely R R andSchmidt A Emergence of healing in the Antarctic ozone layerScience 353 269ndash274 httpsdoiorg101126scienceaae00612016

            Son S W Tandon N F Polvani L M and Waugh D W Ozonehole and Southern Hemisphere climate change Geophys ResLett 36 1ndash5 httpsdoiorg1010292009GL038671 2009

            Soppa M Voumllker C and Bracher A Diatom Phenol-ogy in the Southern Ocean Mean Patterns Trends andthe Role of Climate Oscillations Remote Sens 8 1ndash7httpsdoiorg103390rs8050420 2016

            Spreen G Kaleschke L and Heygster G Sea ice remote sensingusing AMSR-E 89-GHz channels J Geophys Res-Ocean 113C02S03 httpsdoiorg1010292005JC003384 2008

            Squire V A Ocean wave interactions with sea icea reappraisal Annu Rev Fluid Mech 52 37ndash60httpsdoiorg101146annurev-fluid-010719-060301 2020

            Steinacher M Joos F Froumllicher T L Bopp L Cadule PCocco V Doney S C Gehlen M Lindsay K Moore J KSchneider B and Segschneider J Projected 21st century de-crease in marine productivity a multi-model analysis Biogeo-sciences 7 979ndash1005 httpsdoiorg105194bg-7-979-20102010

            Swart N C and Fyfe J C Observed and simulated changes inthe Southern Hemisphere surface westerly wind-stress GeophysRes Lett 39 1ndash6 httpsdoiorg1010292012GL0528102012

            Swart N C Fyfe J C Gillett N and Marshall G J Compar-ing Trends in the Southern Annular Mode and Surface WesterlyJet J Clim 28 8840ndash8859 httpsdoiorg101175JCLI-D-15-03341 2015

            Swiło M Majewski W Minzoni R T and Ander-son J B Diatom assemblages from coastal settingsof West Antarctica Mar Micropaleontol 125 95ndash109httpsdoiorg101016jmarmicro201604001 2016

            Takahashi T Sutherland S C Wanninkhof R Sweeney CFeely R A Chipman D W Hales B Friederich G ChavezF Sabine C Watson A Bakker D C E Schuster U MetzlN Yoshikawa-Inoue H Ishii M Midorikawa T Nojiri YKoumlrtzinger A Steinhoff T Hoppema M Olafsson J Arnar-son T S Tilbrook B Johannessen T Olsen A Bellerby RWong C S Delille B Bates N R and de Baar H J W Cli-matological mean and decadal change in surface ocean pCO2and net seandashair CO2 flux over the global oceans Deep-Sea ResPt II 56 554ndash577 httpsdoiorg101016jdsr22008120092009

            Taljaard J J Development Distribution and Move-ment of Cyclones and Anticyclones in the South-ern Hemisphere During the IGY J Appl Me-teorol 6 973ndash987 httpsdoiorg1011751520-0450(1967)006lt0973DDAMOCgt20CO2 1967

            Taylor F and Sjunneskog C Postglacial marine diatom recordof the Palmer Deep Antarctic Peninsula (ODP Leg 178 Site1098) 2 Diatom assemblages Paleoceanography 17 1ndash12httpsdoiorg1010292000PA000564 2002

            Biogeosciences 17 3815ndash3835 2020 httpsdoiorg105194bg-17-3815-2020

            B L Greaves et al SAM influences phytoplankton in SIZ 3835

            Ter Braak C J and Verdonschot P F Canonical correspondenceanalysis and related multivariate methods in aquatic ecologyAquat Sci 57 255ndash289 httpsdoiorg101007BF008774301995

            Thompson D W Lee S and Baldwin M P Atmospheric pro-cesses governing the northern hemisphere annular modeNorthAtlantic oscillation Geoph Monog Series 134 81ndash112 2003

            Thompson D W Solomon S Kushner P J England M HGrise K M and Karoly D J Signatures of the Antarcticozone hole in Southern Hemisphere surface climate change NatGeosci 4 741ndash749 2011

            Thompson D W J and Solomon S Interpretation of RecentSouthern Hemisphere Climate Change Science 296 895ndash899httpsdoiorg101126science1069270 2002

            Tomas C R (Ed) Identifying marine phytoplankton Academicpress San Diego California 858 pp 1997

            Turner J Bracegirdle T J Phillips T Marshall G J and Hosk-ing J S An initial assessment of Antarctic sea ice extent in theCMIP5 models J Clim 26 1473ndash1484 2013

            Turner J Summerhayes C Sparrow M Mayewski P ConveyP di Prisco G Gutt J Hodgson D Speich S Worby TBo S and Klepikov A Antarctic climate change and the envi-ronment ndash 2015 update Antarctic Treaty Consultative MeetingSofia Bulgaria June 2015 IP 92 2015

            Waters R L Van Den Enden R and Marchant H J Summer mi-crobial ecology off East Antarctica (80ndash150 E) protistan com-munity structure and bacterial abundance Deep-Sea Res Pt II47 2401ndash2435 httpsdoiorg101016S0967-0645(00)00030-8 2000

            Webb T and Bryson R A Late-and postglacial climatic changein the northern Midwest USA quantitative estimates derivedfrom fossil pollen spectra by multivariate statistical analy-sis Quaternary Res 2 70ndash115 httpsdoiorg1010160033-5894(72)90005-1 1972

            Whitaker D and Christman M clustsig Significant Cluster Anal-ysis R package version 11 2014

            Wilson D L Smith Jr W O and Nelson D M Phytoplanktonbloom dynamics of the western Ross Sea ice edge ndash I Primaryproductivity and species-specific production Deep-Sea Res PtI 33 1375ndash1387 httpsdoiorg1010160198-0149(86)90041-5 1986

            Wright S W van den Enden R L Pearce I David-son A T Scott F J and Westwood K J Phyto-plankton community structure and stocks in the SouthernOcean (30ndash80 E) determined by CHEMTAX analysis ofHPLC pigment signatures Deep-Sea Res Pt II 57 758ndash778httpsdoiorg101016jdsr2200906015 2010

            httpsdoiorg105194bg-17-3815-2020 Biogeosciences 17 3815ndash3835 2020

            • Abstract
            • Introduction
              • Importance of the SIZ phytoplankton bloom
              • The Southern Annular Mode
              • The hypothesis
                • Methods
                  • Phytoplankton relative abundance
                  • Environmental covariates
                  • Statistical analysis
                    • Results
                      • The influence of the SAM on phytoplankton community composition
                      • Influence of the SAM on phytoplankton productivity
                      • Observed occurrence and abundance
                        • Discussion
                          • The SAM and phytoplankton community composition
                          • Effect of the SAM on phytoplankton taxa
                          • The effects of the SAM on productivity and biomass
                          • Implications
                            • Conclusions
                            • Data availability
                            • Supplement
                            • Author contributions
                            • Competing interests
                            • Acknowledgements
                            • Financial support
                            • Review statement
                            • References

              B L Greaves et al SAM influences phytoplankton in SIZ 3821

              Table 1 Variance in the community composition of 22 phytoplankton taxa groups attributable to constraining environmental covariables inthe CAP analysis

              CAP analysis Variance Covariate Variance Fraction p

              category of totalvariance

              D 061 154 lt 0001SST 057 146 lt 0001SAMautumn 052 133 lt 0001LONGE 047 119 lt 0001

              (a) Variables fit individually as SAMspring 041 103 lt 0001the only constraining covariate SAMprior 039 99 lt 0001

              DSSI 023 59 0004S 018 47 0018Y 013 34 0086LATS 010 25 0228Minimum latitude of sea ice the previous winter 006 16 0537

              Variance explained by all constraining covariables 148 375 lt 0001

              (b) Optimum Individual D 061 154 lt 0001multi-covariate constraining SAMautumn 050 126 lt 0001model covariables LONGE 021 52 lt 0001

              SAMprior 017 43 0006

              Unexplained residual 246 625 Total variance in taxa composition between samples 394 100

              SAM index These allowed identification of maxima in cor-relation between the SAM and phytoplankton communitystructure Response surfaces were derived by evaluating sep-arate CAP analyses for each combination of (i) the tempo-ral positioning of the daily-SAM averaging range and (ii) thelength of the daily-SAM averaging range In constructing theresponse surfaces the range of the averaged daily SAM wascentred on (i) each calendar day individually (1 Januaryndash31 December) through the year associated with each sam-ple and alternatively (ii) relative to the time of sampling andlagged from 1 to 365 d prior to each sample collection datein 1 d increments The length of the SAM averaging rangewas varied in 2 d increments from zero to plus and minus182 d from the centre of the range Similar response surfaceswere constructed relating the correlation between the aver-aged daily SAM and (i) total chlorophyll and (ii) [PO4]

              Data management and manipulation summary statisticscorrelation analyses and scatter plots were undertaken in Mi-crosoft Excel (2016) and R (R Core Team 2016) Clusteranalysis and SIMPROF were undertaken using the R pack-age clustsig (Whitaker and Christman 2014) CAP analyseswere conducted using the capscale function in the R packagevegan (Dixon 2003)

              3 Results

              31 The influence of the SAM on phytoplanktoncommunity composition

              CAP analysis and pairwise correlation analysis both indi-cated the presence of a relationship between the SAM andphytoplankton community composition Clustering analysisshowed there to be sufficient and systematic variation in phy-toplankton community composition between samples thatsamples could be grouped

              Empirical identification of the time between variation inthe SAM and the manifestation of this variation in the phyto-plankton community structure revealed three maxima in phy-toplankton community composition explained by the SAMThe first of the maxima was an autumn seasonal SAM in-dex (SAMautumn) which was determined to be the average of57 daily SAM estimates centred on the preceding 11 March(11 Februaryndash8 April) SAMautumn explained up to 133 of the variance in phytoplankton community composition es-timated through CAP analysis (Fig 3a Table 1a) The sec-ond of the maxima was a spring seasonal index (SAMspring)which was determined to be the average of 75 daily SAMestimates centred on 25 October (20 Septemberndash3 Decem-ber) SAMspring explained up to 103 of variance in phyto-plankton community composition (Fig 3a Table 1a) Unlikethe other maxima that were related to the time of year thethird of the maxima was timed relative to the date of sample

              httpsdoiorg105194bg-17-3815-2020 Biogeosciences 17 3815ndash3835 2020

              3822 B L Greaves et al SAM influences phytoplankton in SIZ

              Table 2 (a) Summary statistics for environmental variables (b) correlations between taxa group relative abundances and environmental vari-ables (c) correlations among environmental variables (d) correlations between macronutrient concentrations and environmental variables(e) as in (f) but involving only the 50 of samples collected latest in the springndashsummer Correlations significant at α le 005 are in italicand correlations significant after Bonferroni adjustment are also underlined (α lt 00519 for correlations among environmental variablesα lt 00520 for correlations with taxa group relative abundance)

              Environmental variables

              D SAM

              autu

              mn

              SAM

              prio

              r

              SAM

              spri

              ng

              LO

              NGE

              DSS

              I

              SST

              S Y tota

              lchl

              orop

              hyll

              (a) Statistics for environmental covariables

              Unit days index index index E days C PSU year mg mminus3

              Average 96 minus02 01 04 142 65 06 337 ndash 029Min 20 minus08 minus13 minus15 136 minus26 minus18 332 2002 007Max 151 06 20 100 148 gt 365 30 341 2012 070n 52 11 52 11 52 52 5 52 11 49Average standard error of estimate ndash 014 013 014 ndash ndash ndash ndash ndash ndash

              (b) Correlations with taxa group relative abundance

              Chaetoceros atlanticus minus015 055 057 063 020 minus001 minus020 022 013 037Chaetoceros concavicorniscurvatus 037 036 027 035 minus007 027 025 minus014 011 025Chaetoceros castracanei minus036 minus002 026 020 041 minus012 minus036 minus007 minus007 020Chaetoceros dichaeta 048 038 031 029 minus013 037 035 minus017 020 036Chaetoceros neglectus minus070 minus006 042 024 048 minus040 minus069 056 minus004 033Cylindrotheca closterium 013 009 minus010 minus003 002 032 012 002 minus011 003Dactyliosolen antarcticus 018 037 034 027 minus006 018 013 minus008 006 037Dactyliosolen tenuijunctus minus018 minus044 minus008 minus016 016 minus019 minus017 023 minus002 minus010Dictyocha speculum (silicoflagellate) minus078 minus017 030 014 068 minus041 minus075 036 minus014 017discoid centric diatoms minus057 015 006 024 052 minus011 minus057 021 minus015 021Emiliania huxleyi (haptophyte) minus028 minus038 minus042 minus038 021 012 minus025 minus001 minus037 minus024Fragilariopsis cylindruscurta 026 minus006 minus008 minus009 minus058 minus008 035 minus012 024 minus015Fragilariopsis kerguelensis 023 052 016 025 minus007 019 022 minus046 minus005 007Fragilariopsis pseudonana minus013 022 minus002 022 minus010 minus005 minus003 012 022 002Fragilariopsis rhombica 016 minus039 minus058 minus057 minus013 013 022 minus012 minus024 minus059Fragilariopsis ritscheri 011 minus010 000 minus003 minus002 002 010 minus003 003 minus001Guinardia cylindrus 009 012 minus006 minus006 005 017 010 minus003 minus002 012Nitzschia acicularisdecipiens minus047 minus045 minus029 minus031 042 minus032 minus046 009 minus022 minus019Parmales spp (chrysophyte) minus060 minus029 015 minus009 042 minus042 minus065 036 minus028 016Petasaria heterolepis minus025 minus013 minus027 minus008 015 minus017 minus025 002 minus002 minus004Pseudo-nitzschia lineola minus035 039 019 037 036 minus009 minus035 018 001 026Thalassiothrix antarctica minus016 032 012 016 015 minus011 minus011 minus019 minus015 000

              (c) Correlations among environmental variables

              SAMautumn 032SAMprior minus006 051SAMspring 004 056 083LONGE minus063 minus017 010 005DSSI 056 018 minus003 007 minus027SST 092 027 minus014 minus003 minus068 060S minus043 minus014 031 021 023 minus013 minus041Y 018 027 035 032 minus024 002 027 minus006total chlorophyll minus002 050 072 069 011 minus008 minus015 014 043

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              B L Greaves et al SAM influences phytoplankton in SIZ 3823

              Table 2 Continued

              Environmental variables

              D SAM

              autu

              mn

              SAM

              prio

              r

              SAM

              spri

              ng

              LO

              NGE

              DSS

              I

              SST

              S Y tota

              lchl

              orop

              hyll

              (d) Correlations with macronutrients (n= 51)

              [NOx ] minus 077 -039 023 004 053 minus 043 minus 072 054 minus014 012[PO4] minus 073 minus 056 minus007 minus026 062 minus 052 minus 070 039 minus013 minus010[SiO4] minus 056 minus 042 026 minus005 040 minus 049 minus 063 039 009 022

              (e) Correlations with macronutrients (n= 26 later-in-season 50 of samples)

              [NOx ] minus018 minus 058 minus005 minus025 minus023 minus019 002 027 minus017 ndash[PO4] minus013 minus 074 minus051 minus 068 009 minus031 minus001 003 minus002 ndash[SiO4] minus010 minus051 minus004 minus031 minus016 minus035 minus044 minus005 034 ndash

              Figure 4 Maxima of SAM influence on phytoplankton community composition SAMprior was determined relative to sample collection thedepicted solid line represents the average temporal location of the 97 d period and the broken lines represent the earliest and latest extent ofthe range associated with the earliest and latest samples

              collection for each sample and comprised the average of the97 daily SAM estimates centred 102 d prior to each samplecollection date It explained 99 of the variance in phy-toplankton composition (SAMprior Fig 3b Table 1a) Notethat SAMprior and SAMspring temporally overlapped to vary-ing extents across the 52 samples (Fig 4) and so were notentirely independent covariates for example a sample col-lected in the summer had previous days contributing to bothSAMprior and SAMspring

              The optimum CAP model contained four covariates thatexplained the variance in phytoplankton community com-position among samples (Table 1b) While four CAP axeswere statistically significant (p lt 005) the first two axes to-gether explained a total of 311 of the variance in phyto-plankton community composition and the third and fourthaxes together only explained a further 64 (not tabu-lated) Thus Fig 6a illustrates most of the variance explainedby the CAP analysis SAMautumn explained the most vari-ance in community composition (126 ) and SAMprior ex-plained a further 43 of variance (Table 1b) These twoSAM indices were moderately and significantly positively

              correlated (r = 051 Table 2c p lt 0001) Both showedsimilar negative correlations (Table 2b) with the relativeabundances of the small diatoms Fragilariopsis rhombica(Fig 5a) and Nitzschia acicularisdecipiens and the coc-colithophorid Emiliana huxleyi and similar positive cor-relations with the abundances of larger diatoms Chaeto-ceros atlanticus Chaetoceros dichaeta and Dactyliosolenantarcticus A further six taxa showed a correlation withSAMautumn but not SAMprior namely positive correla-tions with Chaetoceros concavicorniscurvatus Fragilari-opsis kerguelensis (Fig 5b) Pseudo-nitzschia lineola andThalassiothrix antarctica and negative correlations withDactyliosolen tenuijunctus and the Parmales Three taxashowed correlations with SAMprior but not SAMautumnnamely positive correlations with Chaetoceros neglectus andthe silicoflagellate Dictyocha speculum and a negative cor-relation with Petasaria heterolepis

              In total 15 of the 22 taxa groups showed significantpairwise correlations (p lt 005) with one or more of theSAM indices with SAMautumn being the most influential (Ta-ble 2b) showing significant correlation with 12 of the 22 taxa

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              3824 B L Greaves et al SAM influences phytoplankton in SIZ

              Table3Identifiedtaxa

              groupstaxataxacodecellscountedcellsm

              easuredaverageindividualcellvolum

              eabundance(averagem

              inimum

              andm

              aximum

              )averagerelative

              abundanceaverage

              totalvolumeaverage

              relativevolum

              eandpercentage

              ofsamples

              inw

              hicheach

              taxagroup

              was

              identified

              TaxonTaxa

              codeC

              ellsC

              ellsA

              verageA

              bundanceR

              elativeA

              verageA

              veragevolum

              eSam

              plescounted

              measured

              individualabundance

              totalfraction

              ofw

              ithtaxon

              cellvolume

              averagevolum

              etotalcellvolum

              e

              Average

              Min

              Max

              Num

              berN

              umber

              microm3

              cellsmLminus

              1cellsm

              Lminus

              1cellsm

              Lminus

              1microm

              3m

              Lminus

              1

              Chaetoceros

              atlanticusca

              356479

              131651

              0364

              22

              81382

              14

              90

              Chaetoceros

              castracaneicca

              4834

              9406

              038

              03

              18616

              04

              48

              Chaetoceros

              concavicorniscurvatuscc

              120200

              344320

              0135

              07

              78443

              14

              77

              Chaetoceros

              dichaetacd

              25631943

              491423

              02503

              13

              145999

              29

              94

              Chaetoceros

              neglectuscn

              634488

              17683

              0697

              35

              11906

              02

              81

              Cylindrotheca

              closteriumcyc

              12250

              12117

              079

              07

              410601

              77

              D

              actyliosolenantarcticus

              da277

              472(61

              899)44

              0195

              16

              1860

              68027

              98

              D

              actyliosolentenuijunctus

              dt1981

              13503828

              2967

              131599

              895

              36716

              100

              D

              ictyochaspeculum

              (silicoflagellate)ds

              8184

              492010

              069

              05

              99301

              15

              48

              discoidcentric

              diatoms

              dcx965

              12808572

              13312

              69652

              437

              55673

              100

              E

              miliania

              huxleyi(haptophyte)ehu

              17370

              6524

              0192

              08

              355201

              58

              Fragilariopsis

              cylindruscurtafcx

              39873013

              70632

              08796

              17

              44167

              09

              98

              Fragilariopsiskerguelensis

              fk1031

              40553748

              1670

              105458

              369

              49265

              98

              Fragilariopsis

              pseudonanafps

              170115

              35526

              0201

              09

              1899904

              69

              Fragilariopsis

              rhombica

              fr4542

              346936

              65829

              207022

              23359

              06

              100

              Fragilariopsisritscheri

              fri46

              19572

              70

              8602

              11

              02002

              35

              G

              uinardiacylindrus

              guc110

              8110

              40515

              079

              06

              225921

              41

              67

              Nitzschia

              acicularisdecipiensnix

              1133509

              251162

              0977

              57

              46705

              10

              98

              Parmales

              spp(chrysophyte)parm

              3222

              838

              0668

              17

              33400

              27

              Petasaria

              heterolepis(other)

              pet45

              ndash(65)

              70

              18703

              2667

              01

              6

              Pseudonitzschia

              lineolapsl

              681403

              109391

              4376

              41

              8446015

              100

              Thalassiothrix

              antarcticata

              112269

              (63000)

              130

              17206

              314

              42448

              85

              Biogeosciences 17 3815ndash3835 2020 httpsdoiorg105194bg-17-3815-2020

              B L Greaves et al SAM influences phytoplankton in SIZ 3825

              Figure 5 Scatter-plots (a b) examples of phytoplankton taxon relative abundance versus SAMautumn (c) LONGE of sample collectionversus D and (d) [PO4] versus SAMautumn Each figure shows r2 and p associated with the relationship A line of least-squares best fit isprovided to give an indication of trend

              groups When applying the conservative Bonferroni-adjustedα = 00025 seven taxa groups showed significant correlation(p lt 00025) with any SAM index and four with SAMautumn

              SAMprior and SAMspring represented a similar time span inthe spring immediately prior to sampling (Fig 4) and werestrongly and significantly correlated (r = 083 Table 2cp lt 0001) Samples were collected over a calendar rangeof 140 d (20 Octoberndash28 February Table 2a) and thus the97 d period represented by SAMprior varied in its positionin the calendar across the 140 d spread of the 52 samples(Fig 4) SAMprior and SAMspring also showed similar corre-lation signs with taxa group relative abundances (Table 2b)It was not possible however to determine whether the pre-season SAM influence was a spring effect or a prior-to-sampling effect and whilst both appear to be important ex-planatory terms only SAMprior was retained in the optimumCAP model (Table 1b)

              In the optimum multi-covariate CAP model D explainedthe greatest proportion of the observed variance in phyto-plankton community composition (Table 1b) D was signif-icantly correlated (p lt 00025) with SST S and DSSI andthe variable singly captured the most variation in phytoplank-ton community composition associated with seasonal suc-cession Alone it explained 154 of the total variance (Ta-

              ble 1b) with its effect on the phytoplankton community be-ing approximately orthogonal to that of the SAM (Fig 6a) Aweak positive relationship detected between SAMautumn andD indicated a weak trend of sampling later in the springndashsummer period in years with a higher autumn SAM (r =032 Table 2c p = 002) but otherwise the SAM indicesand D were un-related

              A total of 10 taxa groups showed significant correlation(p lt 005) between their relative abundance and D (Ta-ble 2b) Chaetoceros castracanei C neglectus D specu-lum E huxleyi N acicularisdecipiens Parmales P line-ola and the discoid centric diatoms showed negative relative-abundance correlations with D indicating greatest relativeabundance early in the springndashsummer while C concavicor-niscurvatus and C dichaeta showed greater relative abun-dance later in the springndashsummer A negative correlation(minus063 p lt 0001) was detected between the longitude ofindividual sample collection (LONGE) and D indicatingthat samples collected later in the springndashsummer were morelikely to have been collected towards the west in the sampledregion (Table 2c Fig 5c)

              Following cluster analysis similarity profile (SIMPROF)permutation analysis identified seven significantly differentgroups (p lt 005) with samples loosely grouped on the ba-

              httpsdoiorg105194bg-17-3815-2020 Biogeosciences 17 3815ndash3835 2020

              3826 B L Greaves et al SAM influences phytoplankton in SIZ

              Figure 6 (a) CAP analysis of phytoplankton community composition Dots represent individual samples with colours corresponding tosignificant clusters (Fig 6b) The 22 phytoplankton taxagroups are overlain as weighted averages of their sample scores (red abbreviationsafter Fig 2) with positions plotted with a 3-times-larger distance from the origin to more easily visualise their relationships with constrainingenvironmental variables Linear projections of the significant constraining environmental covariates appear as blue arrows the length andangle of which represent the magnitude and direction of influence of each variable on community composition The inset shows the taxalocated close to the origin diatoms fri and cyc collocating (b) Cluster analysis dendrogram of the 52 samples based on similarities inphytoplankton community structure using colour to show seven significantly different groups (numbered 1ndash7 solid lines α = 005) Samplelabels contain season and voyage (eg 0809v2b= austral springndashsummer over 2008ndash2009 voyage designation 2 sample b is the secondsample obtained from the SIZ during that voyage) SAMautumn value SAMprior value and the D value

              sis of their within-season successional maturity (D) and theSAM (Fig 6b) and demonstrated that there were signifi-cant differences between the community composition of thesamples The group structure determined by cluster analy-sis was displayed in the CAP ordination (using colour) todemonstrate that samples that clustered together were indeedclose to one another in the two-dimensional (2D) ordina-tion (Fig 6a) with their positioning further indicating theinfluences of D and the SAM on cluster groupings This lentconfidence that the 2D ordination was a reasonable approx-imation to the full high-dimensional structure As we knewthe values for the environmental covariates for each sam-ple it was possible to determine the correlation between the2D CAP solution and each environmental covariate We dis-played these correlations as a projected vector (arrow) wheredirection indicates the sign and length indicates strengthThis showed samples in clusters 3 and 4 (Fig 6b) were com-monly associated with a more positive SAM while those inclusters 5 6 and 7 were commonly associated with morenegative SAM values Samples in clusters 2 and 5 were com-

              monly collected earlier in the springndashsummer period (lowerD) while those in clusters 1 4 6 and 7 were commonly col-lected later (Fig 6)

              Other considered environmental covariates that did notsignificantly influence community composition were thetime of the day that a sample was collected and the mini-mum latitude reached by sea ice cover in the previous winter(Supplement Table S1)

              These analyses were also undertaken using phytoplanktonabsolute abundances rather than with relative abundances asreported above The analysis of absolute abundance showedsimilar temporal peaks in variance explained (SupplementFig S4) although it explained less variance (SAMautumn ex-plaining 109 SAMspring 91 and SAMprior 92 ) (Ta-ble S3) Individual taxa correlations with SAM indices (Ta-ble S4) showed a similar pattern to those estimated using rel-ative abundances (Table 2b)

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              B L Greaves et al SAM influences phytoplankton in SIZ 3827

              32 Influence of the SAM on phytoplanktonproductivity

              Two indicators of the influence of the SAM on phytoplank-ton productivity were obtained (i) the influence of the SAMon satellite-derived total chlorophyll and (ii) the influence ofthe SAM on macronutrient concentrations indicating nutri-ent drawdown associated with productivity Using the timesand locations of the 52 samples over the 11 years of ourstudy satellite-derived total chlorophyll showed positive cor-relation with all SAM indices r = 050 (p lt 0001) withSAMautumn r = 072 (p lt 0001) with SAMprior and r =069 (p lt 0001) with SAMspring (Table 2c) Peaks in thecorrelation of total chlorophyll with the SAM were evidentin the preceding autumn and spring and prior to sampling inresponse surfaces for NASA satellite total chlorophyll alongwith a peak in early winter (Fig S1) While further data arerequired to confirm this correlation the results obtained inthis study supported the presence of a positive relationshipbetween productivity and the SAM

              The observed concentrations of the macronutrients NOx PO4 and SiO4 showed significant negative correlationswith SAMautumn (r =minus039 minus056 minus042 respectively Ta-ble 2d p 0005 lt 0001 0002 respectively) The concen-trations of these nutrients showed stronger negative correla-tions with SAMautumn when the 50 of samples collectedlatest in the springndashsummer season was considered (r =minus058 minus074 minus051 Table 2e p 0002 lt 0001 0008respectively) Macronutrient concentrations were unrelatedto either SAMprior or SAMspring (Table 2d) Peaks in neg-ative correlation of the SAM on [PO4] were evident in thepreceding autumn and spring prior to sampling in responsesurfaces with the peaks being more negative when only the50 of samples collected later in the springndashsummer wereconsidered (Fig S2) The concentrations of macronutrientsalso showed expected decline through the springndashsummercorrelations between [NOx] [PO4] and [SiO4] withD wereminus077minus073 andminus056 respectively (Table 2d p lt 0001lt 0001 lt 0001 respectively)

              33 Observed occurrence and abundance

              Abundance of individual taxa groups averaged 133 cells permillilitre and ranged to a maximum of 8796 cells per mL (Ta-ble 3) Individual cell volume ranged from 8 microm3 for the Par-males spp to gt 60 000 microm3 for the diatoms Dactyliosolenantarcticus and Thalassiothrix antarctica Average relativeabundance ranged from 02 for the diatom Fragilariopsisritscheri to 17 for the combined taxa group Fragilariop-sis cylindruscurta Of the 22 taxa groups resolved in thisstudy four taxa groups were identified in all 52 samples and11 taxa groups were identified in more than 90 of samples(Table 3)

              4 Discussion

              41 The SAM and phytoplankton communitycomposition

              Our results show that the SAM shows a relationship withthe community composition of phytoplankton in the sea-sonal ice zone (SIZ) of the Southern Ocean (SO) This con-clusion was supported by a combination of three analyses(i) Permutation-based analyses of cluster structure demon-strated that the 52 samples were separable into seven statisti-cally different groups on the basis of community abundancecomposition of the 22 taxa groups (Fig 6b) and thus thatthere was variation between samples that might be explain-able with known environmental variables if clustering hadrevealed few or no clusters it would have been indicative oflevels of community variance (either high or low) unlikelyto be systematically explainable with the environmental vari-ables (ii) CAP analysis identified the SAM as a significantexplanatory variable on the structure of the phytoplanktoncommunity (Table 1b) and showed that groups identified incluster analysis were generally distinguished by the SAMand the D that a sample was collected (Fig 6) (iii) 15 ofthe 22 taxa groups resolved showed significant pairwise cor-relations (p lt 005) between relative abundance and at leastone of the three derived SAM indices (Table 2b)

              The derived SAM index with greatest influence on phy-toplankton community composition SAMautumn (Figs 3 4)explained 126 of the variance of phytoplankton commu-nity composition in the optimum multi-variable CAP model(Table 1b) SAMautumn represented the average SAM aroundthe time that sea ice was extending northward through theSIZ (Fig 1a) At this time phytoplankton productivity inthe SIZ would have declined to around 30 of its mid-summer maximum (Moore and Abbott 2000 Arrigo et al2008 Constable et al 2014) and phytoplankton would bepreparing for winter by variously producing energy stor-age products producing resting spores or cysts reducingmetabolic rate and engaging in heterotrophic consumptionfor energy (Fryxell 1989 McMinn and Martin 2013) Theformation of sea ice reduces available light by as much as999 (McMinn et al 1999) severely limiting light forphytoplankton for around half of each year at the rangeof longitude sampled latitude 64 S was covered in seaice for half the time across the sampled years (Fig 1a)Windier conditions associated with a more positive SAM inautumn may delay the consolidation of sea ice into largerfloes (Roach et al 2018) extending the phytoplankton grow-ing season and possibly increasing the relative abundanceof taxa that occur later in the springndashsummer season Thequantity of phytoplankton that survive the Antarctic winteris extremely low (McMinn and Martin 2013) and the abun-dance of taxa present and their metabolic condition whenthe autumn sea ice forms may strongly influence their vi-ability relative vigour and availability to seed the subse-

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              3828 B L Greaves et al SAM influences phytoplankton in SIZ

              quent post-winter bloom This possibility was supported bythe observation that the only two taxa groups observed tohave significantly (p lt 005) higher relative abundance laterin the springndashsummer the Chaetoceros species C dichaetaand C concavicorniscurvatus were both observed to alsoshow significantly higher relative abundances when the pre-ceding SAMautumn was more positive (Table 2b) Thus SAM-induced effects on phytoplankton in the autumn could wellinfluence the phytoplankton community structure in the fol-lowing post-winter productive season

              Extending the springndashsummer productive season by de-laying the autumn consolidation of sea ice may result inmore prolonged declines in relative abundance of taxa thatare more prolific earlier in the springndashsummer and may thusreduce the population from which the following post-winterbloom is initiated Of the eight taxa groups showing sta-tistically higher relative abundance earlier in the springndashsummer (p lt 005) three showed corresponding statisticallylower relative abundances with higher preceding SAMautumn(Emiliana huxleyi Nitzschia acicularisdecipiens and Par-males spp p lt 005 Table 2b) supporting this conjec-ture Of the remaining five taxa groups of the eight fourshowed no detectable relationship with SAMautumn and one(Pseudonitzschia lineola) showed a positive relationship

              Two other derived SAM indices were found to influencephytoplankton SAMspring and SAMprior These indices weredifficult to distinguish due to their largely overlapping timeperiods (Fig 4) and they were strongly correlated (r = 083p lt 005 Table 2c) with similar influence on taxonomicabundances (Table 2b) SAMprior was the preferred parame-ter for the multiparameter CAP model in which it explained43 of total variance Windier and stormier conditions as-sociated with a higher SAM in the months prior to sam-pling would increase nutrient input to the euphotic zone fromdeeper waters (Lovenduski and Gruber 2005) promotingproductivity whilst at the same time episodically dilutingsurface phytoplankton through deeper mixing More stormyconditions may also have brought about a faster break-upof winter sea ice promoting earlier spring phytoplanktongrowth Conversely windier conditions would also restrictstratification of the surface ocean precluding phytoplanktonbloom formation lessening productivity (Fitch and Moore2007) and reducing the abundance of early blooming taxaThis may explain the responses of Emiliania huxleyi and thecombined Nitzschia acicularisdecipiens group which bothshowed early maximum abundances (r =minus028 and minus047respectively with D p lt 005 Table 2b) and also nega-tive correlations with SAMspring and SAMprior (r =minus029to minus042 p lt 005 Table 2b) Five other taxa groups withearly maximum abundance (negative correlation with Dp lt 005) showed no detectable correlation with SAMspringand one (Pseudonitzschia lineola) showed a positive rela-tionship indicating that their abundances were determinedby environmental factors that prevail early in the season butnot those factors altered by variations in the SAM Histori-

              cally the variance in the SAM is lower in the spring quar-ter than in other quarters (NOAA 2005) perhaps explainingwhy SAMspring and SAMprior explained less variance in com-munity composition than SAMautumn

              We expected the SAM prior to sampling (SAMprior andSAMspring) would show a relationship with phytoplanktoncomposition and a lesser relationship of the SAM in thewinter is plausible because the surface of the ocean is in-sulated from atmospheric conditions by sea ice The relation-ship with the SAM the previous autumn was not expected butis also plausible as it coincides with the time when sea ice isforming and thus a critical time for phytoplankton preparingto hibernate the half-year of sea ice cover We also observeda similar relationship between SAMautumn and (i) NASAsatellite total chlorophyll and (ii) macronutrient concentra-tions across all samples as well as (iii) a stronger correla-tion with macronutrient concentrations when only the sam-ples collected in the latter half of the season were considered(Table 2c d and e respectively) We also observed maximain the autumn SAM relationship in response-surface analy-ses of the correlation between the SAM and (i) NASA satel-lite total chlorophyll and (ii) [PO4] in all samples as well as(iii) a stronger maxima with [PO4] when only the samplescollected later in the season were considered (Figs S1 andS2) Both total chlorophyll and [PO4] were observationallyindependent of the taxonomic cell counts and whilst [PO4]was estimated from parallel samples as the taxonomic analy-sis NASA satellite total chlorophyll had no material connec-tion with collected samples being linked only geographicallyand temporally and thus offers independent support for theunexpected observation that phytoplankton community com-position in the springndashsummer is related to the SAM in theprevious autumn The empirically defined SAMautumn alsoshowed significant (p lt 005) pairwise correlations with 12of the 22 taxa groups resolved (Table 2b)

              42 Effect of the SAM on phytoplankton taxa

              Nothing has been previously reported with respect to the cli-matic preferences of the majority of taxa identified in thisstudy and only 10 of the 22 taxa groups considered in ourresearch had data records in the Ocean Biogeographic In-formation System (OBIS 2020) Some of the observed taxahave been reported to show various relationships with en-vironmental factors including sea-surface temperature timethrough the season and latitude but often at the taxonomiclevel of genera rather than at a species level (Burckle et al1987 Chiba et al 2000 Waters et al 2000 Green and Sam-brotto 2006 Gomi et al 2007) We however observed dif-fering responses to environmental variables among closelyrelated taxa This was exemplified by the opposite correla-tions of Chaetoceros species C dicheata and C neglectuswith D (048 and minus070 respectively p lt 00025 Table 2b)and the opposite correlations of Fragilariopsis species Frhombica and F kerguelensis with SAMautumn (minus039 and

              Biogeosciences 17 3815ndash3835 2020 httpsdoiorg105194bg-17-3815-2020

              B L Greaves et al SAM influences phytoplankton in SIZ 3829

              052 respectively p lt 005 Table 2b Fig 5a b) The strongand opposite response to these variables by species belong-ing to the same genus indicates the importance of species-level observation in detecting subtle changes in pelagic phy-toplankton communities

              A third of analysed taxa comprising 7 taxa and 23 of all counted cells showed no detectable relationship withthe SAM This could be due to large errors associated withlow counts of rarer taxa because unaccounted variation wasmasking any relationship or because the taxa were insensi-tive to the SAM There is less chance of detecting relation-ships between taxa and environment variables when fewerindividuals are counted however some less represented taxadid show relationships with SAM indices (eg Emilianiahuxleyi |r|gt 038 Table 2b) Of the 22 taxa resolved 5showed no significant relationships with either the SAM orD All were comparatively scarce and together representedonly 2 of all cells counted Assessing species composi-tions across a greater fraction of each sample and thus count-ing more of the scarcer taxa may have revealed relationshipsbetween these rarer taxa and environmental variables (Nak-agawa and Cuthill 2007) Yet it remains possible that thesetaxa are actually unaffected by seasonal succession and theSAM instead responding to other environmental variablesthat were not measured as part of this study or that they re-main as persistent but relatively rare background taxa withrespect to the overall phytoplankton assemblage

              This is the first study to show a link between variationin the SAM and the composition of phytoplankton commu-nities in the SO although similar findings have been re-ported for other major climatic phenomena in other partsof the globe The climatically similar Northern HemisphereAnnular Mode (NAM) causes increased westerly winds anddeeper mixed layers at middle to high northern latitudes inits positive phase (Nehring 1998 Thompson et al 2003Kahru et al 2011) The NAM has been related to the tim-ing abundance and biomass of phytoplankton taxa at highnorthern latitudes (Nehring 1998 Belgrano et al 1999 Ot-tersen et al 2001 Blenckner and Hillebrand 2002) andto the delayed occurrence of maximum chlorophyll in theNorth Atlantic Summer (Kahru et al 2011) Similarly theEl NintildeondashSouthern Oscillation (ENSO) equatorial mode hasbeen shown to influence the distribution and abundance ofphytoplankton in the tropical oceans (Blanchot et al 1992)

              Phytoplankton are the pastures of the oceans and it is plau-sible that the climate in both autumn and spring influencethe phytoplankton community composition of phytoplank-ton and their ecological progression through the productivespringndashsummer period in the SIZ Climate change impactshave now been documented across every type of ecosystemon Earth (Scheffers et al 2016 Harris et al 2018) and thedistribution abundance phenology and productivity of phy-toplankton communities throughout the world are changingin response to warming acidifying and stratifying oceans(Hoegh-Guldberg and Bruno 2010) We have detected an

              association between variation in phytoplankton communitycomposition and variation in the SAM over a relatively brief11-year monitoring period despite all the other environmen-tal factors that elicit variability in phytoplankton communi-ties in the SIZ of the SO

              43 The effects of the SAM on productivity andbiomass

              A positive SAM has previously been shown to be associ-ated with increased standing stocks and productivity of phy-toplankton in the SIZ of the SO (Arrigo et al 2008 Boyce etal 2010 Soppa et al 2016) In the SIZ above the AntarcticDivergence nutrients are replenished from the deeper oceanthrough the unproductive winter and the levels of nutritionremaining at the end of summer integrate the total draw-down of nutrients by phytoplankton production over the en-tire springndashsummer growing season (Arrigo et al 1999) Weobserved this nutrient drawdown through the springndashsummeras the negative correlation between all macronutrient con-centrations and D (Table 2d) We also observed a nega-tive relationship between all macronutrient concentrations inthe springndashsummer and the previous SAMautumn (Table 2dFig 5d) suggesting that an elevated SAM in autumn leadsto greater productivity and thus greater nutrient drawdownduring the following springndashsummer The nutrient concen-trations at the end of the springndashsummer productive seasonwould be expected to best represent the total productivityover the season we observed that the correlation between nu-trient concentrations and SAMautumn were higher when onlythe 50 of samples collected later in the springndashsummerwere considered (Table 2e) further supporting the conjec-ture that a higher SAM in the autumn is linked with greaterproductivity through the following springndashsummer

              The observed positive relationship between total chloro-phyll and all the SAM indices (r = 05 to 072 p lt 00025Table 2c) and the presence of apparent spring and autumnmaxima in the response surfaces of the variance in totalchlorophyll explained by the SAM (Fig S1) further sup-port the conjecture that a more positive SAM is linked withgreater total chlorophyll and thus greater total productivityin the SIZ The total chlorophyll data considered were limitedto the 52 samples collected that is estimated for the timesand locations of each sample collection Estimates werecoarsely determined as interpolations of available monthlypredictions (Fig S3) and estimates could be thus obtainedfor only 49 of the 52 samples Yet there are indicators of re-liability in the sparse information the diatom Fragilariopsisrhombica is always relatively small (Table 3) and when therelative abundance of this taxon was high total chlorophyllwas lower (r =minus059 p lt 00025 Table 2b) and when therelative abundance of larger diatoms were high total chloro-phyll was also often high (eg Dactyliosolen antarcticusr = 037 p lt 005 Table 2b)

              httpsdoiorg105194bg-17-3815-2020 Biogeosciences 17 3815ndash3835 2020

              3830 B L Greaves et al SAM influences phytoplankton in SIZ

              44 Implications

              The SIZ is a productive region of the SO (Moore and Abbott2000) and changes to the SIZ phytoplankton communityhave potentially far-reaching implications for the ecosystemservices these organisms provide including carbon exportto the deep ocean and supporting the productivity of almostall Antarctic life Increases in the relative abundance of thelarger Chaetoceros spp diatoms would favour grazing bylarge metazooplankton especially krill (Boyd et al 1984Kawaguchi et al 1999 Moline et al 2004) which linkphytoplankton to whales seabirds seals and most higherAntarctic life forms (Smetacek 2008) Such changes wouldalso increase the efficiency of the biological pump as thelarger phytoplankton sink more rapidly than small phyto-plankton (Alldredge and Gotschalk 1989) and increasedgrazing by krill would reparcel some phytoplankton biomassinto faeces that would also sink more rapidly (Cadeacutee etal 1992) Such changes in carbon flux and trophodynam-ics would act as a negative feedback on climate change byspeeding the sequestration of carbon to the deep ocean

              The SAM is predicted to become increasingly positivein the future (Arblaster and Meehl 2006 Swart and Fyfe2012 Gillett and Fyfe 2013 Abram et al 2014 Solomonet al 2016) Our results cannot necessarily be extrapolatedto infer changes that will likely occur as the SAM contin-ues to increase as evolutionary responses can partly miti-gate adverse effects on phytoplankton of longer-term climatechange and future changes in climate are likely to imposeother co-stressors on phytoplankton inhabiting these waters(Lohbeck et al 2014 Schluumlter et al 2014 Deppeler andDavidson 2017) Our study showed that some of the vari-ation in the phytoplankton composition in the seasonal icezone was significantly related to variation in the SAM andthat the sign and magnitude of the correlation with the SAMdiffered among species

              5 Conclusions

              Statistical analyses indicated that together the autumn andspring SAM explained a higher percentage (179 ) of thevariation in phytoplankton community composition than anyvariable mostly due to the autumn SAM (up to 133 ) Intotal this exceeded the variance explained by any other vari-able even that attributable to the time of the season thatthe sample was collected (154 ) or other critical phys-ical variables such as temperature salinity and latitudeFurthermore 15 of the 22 phytoplankton taxa identified inthis study showed significant correlation with the SAM andthere were indications that a more positive SAM was relatedto increased phytoplankton productivity in the SIZ Whilethis study was limited in both timespan (11 austral springndashsummers) and the overall variance in phytoplankton compo-sition explained by all the constraining variables (375 ) it

              suggests that the phytoplankton of the SIZ are indeed sensi-tive to changes in the SAM and thus possibly responsive toclimate change

              Data availability The dataset used in this paper is available athttpsdoiorg10261795d9181f7308bd (Greaves et al 2019)

              Supplement The supplement related to this article is available on-line at httpsdoiorg105194bg-17-3815-2020-supplement

              Author contributions Author contributions BLG contributed toconceptualisation data curation formal analysis investigationmethodology software and supervision validation visualisationwriting of the original draft writing and review and editing ATDcontributed to conceptualisation funding acquisition formal anal-ysis methodology project administration resources supervisionwriting and review and editing ADF contributed to formal analy-sis methodology resources writing and review and editing JPMcontributed to formal analysis methodology software writing andreview and editing AM contributed to project administration su-pervision writing and review and editing AMcM contributed tofunding acquisition project administration resources writing andreview and editing SWM contributed to conceptualisation fund-ing acquisition formal analysis writing and review and editing

              Competing interests The authors declare that they have no conflictof interest

              Acknowledgements Sampling on Astrolabe was supported bya FrenchndashAustralian research collaboration The Institut PolaireFranccedilais Paul-Eacutemile-Victor supported access to the ship and fieldoperations The biogeochemical data collection was coordinatedby Alain Poisson and Nicolas Metzl Sorbonne Universiteacute andBronte Tilbrook CSIRO Oceans and Atmosphere Steve Rintoul(CSIRO) and Rose Morrow (LEGOS) coordinated the collection ofsalinity and temperature data The Antarctic Climate and Ecosys-tems CRC and the Integrated Marine Observing System are thankedfor supporting the operation of sensors the collection of water sam-ples and nutrient analyses reported in this study Alan Poole MattSherlock John Akl Kate Berry Lesley Clementson Brian Grif-fiths (CSIRO) Rick van den Enden Rob Johnson (AAD) and themany dedicated volunteers and shipsrsquo officers and crew are thankedfor their important contributions to the field efforts and data man-agement We thank the University of Tasmania and the AustralianAntarctic Division for the space and resources needed to undertakethis work Thanks to Nathaniel Bindoff and Simon Wotherspoon fortheir consideration of parts of the paper Thanks are due to the re-viewer Damiano Righetti for the valuable input he provided in par-ticular for pointing out ambiguities and small errors and improvingthe clarity of the paper and an anonymous reviewer for the struc-tural and theoretical considerations Total chlorophyll data used inthis paper were produced with the Giovanni online data system de-veloped and maintained by the NASA GES DISC

              Biogeosciences 17 3815ndash3835 2020 httpsdoiorg105194bg-17-3815-2020

              B L Greaves et al SAM influences phytoplankton in SIZ 3831

              Financial support This research has been supported by the Uni-versity of Tasmania (Institute of Marine and Antarctic Studies) bythe Australian Governmentrsquos Cooperative Research Centre programthrough the Antarctic Climate and Ecosystems CRC the AustralianAntarctic Division (projects 40 and 4107) and by the Australian Re-search Councilrsquos Special Research Initiative for Antarctic GatewayPartnership (project no SR140300001)

              Review statement This paper was edited by Julia Uitz and re-viewed by Damiano Righetti and one anonymous referee

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              Takahashi T Sutherland S C Wanninkhof R Sweeney CFeely R A Chipman D W Hales B Friederich G ChavezF Sabine C Watson A Bakker D C E Schuster U MetzlN Yoshikawa-Inoue H Ishii M Midorikawa T Nojiri YKoumlrtzinger A Steinhoff T Hoppema M Olafsson J Arnar-son T S Tilbrook B Johannessen T Olsen A Bellerby RWong C S Delille B Bates N R and de Baar H J W Cli-matological mean and decadal change in surface ocean pCO2and net seandashair CO2 flux over the global oceans Deep-Sea ResPt II 56 554ndash577 httpsdoiorg101016jdsr22008120092009

              Taljaard J J Development Distribution and Move-ment of Cyclones and Anticyclones in the South-ern Hemisphere During the IGY J Appl Me-teorol 6 973ndash987 httpsdoiorg1011751520-0450(1967)006lt0973DDAMOCgt20CO2 1967

              Taylor F and Sjunneskog C Postglacial marine diatom recordof the Palmer Deep Antarctic Peninsula (ODP Leg 178 Site1098) 2 Diatom assemblages Paleoceanography 17 1ndash12httpsdoiorg1010292000PA000564 2002

              Biogeosciences 17 3815ndash3835 2020 httpsdoiorg105194bg-17-3815-2020

              B L Greaves et al SAM influences phytoplankton in SIZ 3835

              Ter Braak C J and Verdonschot P F Canonical correspondenceanalysis and related multivariate methods in aquatic ecologyAquat Sci 57 255ndash289 httpsdoiorg101007BF008774301995

              Thompson D W Lee S and Baldwin M P Atmospheric pro-cesses governing the northern hemisphere annular modeNorthAtlantic oscillation Geoph Monog Series 134 81ndash112 2003

              Thompson D W Solomon S Kushner P J England M HGrise K M and Karoly D J Signatures of the Antarcticozone hole in Southern Hemisphere surface climate change NatGeosci 4 741ndash749 2011

              Thompson D W J and Solomon S Interpretation of RecentSouthern Hemisphere Climate Change Science 296 895ndash899httpsdoiorg101126science1069270 2002

              Tomas C R (Ed) Identifying marine phytoplankton Academicpress San Diego California 858 pp 1997

              Turner J Bracegirdle T J Phillips T Marshall G J and Hosk-ing J S An initial assessment of Antarctic sea ice extent in theCMIP5 models J Clim 26 1473ndash1484 2013

              Turner J Summerhayes C Sparrow M Mayewski P ConveyP di Prisco G Gutt J Hodgson D Speich S Worby TBo S and Klepikov A Antarctic climate change and the envi-ronment ndash 2015 update Antarctic Treaty Consultative MeetingSofia Bulgaria June 2015 IP 92 2015

              Waters R L Van Den Enden R and Marchant H J Summer mi-crobial ecology off East Antarctica (80ndash150 E) protistan com-munity structure and bacterial abundance Deep-Sea Res Pt II47 2401ndash2435 httpsdoiorg101016S0967-0645(00)00030-8 2000

              Webb T and Bryson R A Late-and postglacial climatic changein the northern Midwest USA quantitative estimates derivedfrom fossil pollen spectra by multivariate statistical analy-sis Quaternary Res 2 70ndash115 httpsdoiorg1010160033-5894(72)90005-1 1972

              Whitaker D and Christman M clustsig Significant Cluster Anal-ysis R package version 11 2014

              Wilson D L Smith Jr W O and Nelson D M Phytoplanktonbloom dynamics of the western Ross Sea ice edge ndash I Primaryproductivity and species-specific production Deep-Sea Res PtI 33 1375ndash1387 httpsdoiorg1010160198-0149(86)90041-5 1986

              Wright S W van den Enden R L Pearce I David-son A T Scott F J and Westwood K J Phyto-plankton community structure and stocks in the SouthernOcean (30ndash80 E) determined by CHEMTAX analysis ofHPLC pigment signatures Deep-Sea Res Pt II 57 758ndash778httpsdoiorg101016jdsr2200906015 2010

              httpsdoiorg105194bg-17-3815-2020 Biogeosciences 17 3815ndash3835 2020

              • Abstract
              • Introduction
                • Importance of the SIZ phytoplankton bloom
                • The Southern Annular Mode
                • The hypothesis
                  • Methods
                    • Phytoplankton relative abundance
                    • Environmental covariates
                    • Statistical analysis
                      • Results
                        • The influence of the SAM on phytoplankton community composition
                        • Influence of the SAM on phytoplankton productivity
                        • Observed occurrence and abundance
                          • Discussion
                            • The SAM and phytoplankton community composition
                            • Effect of the SAM on phytoplankton taxa
                            • The effects of the SAM on productivity and biomass
                            • Implications
                              • Conclusions
                              • Data availability
                              • Supplement
                              • Author contributions
                              • Competing interests
                              • Acknowledgements
                              • Financial support
                              • Review statement
                              • References

                3822 B L Greaves et al SAM influences phytoplankton in SIZ

                Table 2 (a) Summary statistics for environmental variables (b) correlations between taxa group relative abundances and environmental vari-ables (c) correlations among environmental variables (d) correlations between macronutrient concentrations and environmental variables(e) as in (f) but involving only the 50 of samples collected latest in the springndashsummer Correlations significant at α le 005 are in italicand correlations significant after Bonferroni adjustment are also underlined (α lt 00519 for correlations among environmental variablesα lt 00520 for correlations with taxa group relative abundance)

                Environmental variables

                D SAM

                autu

                mn

                SAM

                prio

                r

                SAM

                spri

                ng

                LO

                NGE

                DSS

                I

                SST

                S Y tota

                lchl

                orop

                hyll

                (a) Statistics for environmental covariables

                Unit days index index index E days C PSU year mg mminus3

                Average 96 minus02 01 04 142 65 06 337 ndash 029Min 20 minus08 minus13 minus15 136 minus26 minus18 332 2002 007Max 151 06 20 100 148 gt 365 30 341 2012 070n 52 11 52 11 52 52 5 52 11 49Average standard error of estimate ndash 014 013 014 ndash ndash ndash ndash ndash ndash

                (b) Correlations with taxa group relative abundance

                Chaetoceros atlanticus minus015 055 057 063 020 minus001 minus020 022 013 037Chaetoceros concavicorniscurvatus 037 036 027 035 minus007 027 025 minus014 011 025Chaetoceros castracanei minus036 minus002 026 020 041 minus012 minus036 minus007 minus007 020Chaetoceros dichaeta 048 038 031 029 minus013 037 035 minus017 020 036Chaetoceros neglectus minus070 minus006 042 024 048 minus040 minus069 056 minus004 033Cylindrotheca closterium 013 009 minus010 minus003 002 032 012 002 minus011 003Dactyliosolen antarcticus 018 037 034 027 minus006 018 013 minus008 006 037Dactyliosolen tenuijunctus minus018 minus044 minus008 minus016 016 minus019 minus017 023 minus002 minus010Dictyocha speculum (silicoflagellate) minus078 minus017 030 014 068 minus041 minus075 036 minus014 017discoid centric diatoms minus057 015 006 024 052 minus011 minus057 021 minus015 021Emiliania huxleyi (haptophyte) minus028 minus038 minus042 minus038 021 012 minus025 minus001 minus037 minus024Fragilariopsis cylindruscurta 026 minus006 minus008 minus009 minus058 minus008 035 minus012 024 minus015Fragilariopsis kerguelensis 023 052 016 025 minus007 019 022 minus046 minus005 007Fragilariopsis pseudonana minus013 022 minus002 022 minus010 minus005 minus003 012 022 002Fragilariopsis rhombica 016 minus039 minus058 minus057 minus013 013 022 minus012 minus024 minus059Fragilariopsis ritscheri 011 minus010 000 minus003 minus002 002 010 minus003 003 minus001Guinardia cylindrus 009 012 minus006 minus006 005 017 010 minus003 minus002 012Nitzschia acicularisdecipiens minus047 minus045 minus029 minus031 042 minus032 minus046 009 minus022 minus019Parmales spp (chrysophyte) minus060 minus029 015 minus009 042 minus042 minus065 036 minus028 016Petasaria heterolepis minus025 minus013 minus027 minus008 015 minus017 minus025 002 minus002 minus004Pseudo-nitzschia lineola minus035 039 019 037 036 minus009 minus035 018 001 026Thalassiothrix antarctica minus016 032 012 016 015 minus011 minus011 minus019 minus015 000

                (c) Correlations among environmental variables

                SAMautumn 032SAMprior minus006 051SAMspring 004 056 083LONGE minus063 minus017 010 005DSSI 056 018 minus003 007 minus027SST 092 027 minus014 minus003 minus068 060S minus043 minus014 031 021 023 minus013 minus041Y 018 027 035 032 minus024 002 027 minus006total chlorophyll minus002 050 072 069 011 minus008 minus015 014 043

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                B L Greaves et al SAM influences phytoplankton in SIZ 3823

                Table 2 Continued

                Environmental variables

                D SAM

                autu

                mn

                SAM

                prio

                r

                SAM

                spri

                ng

                LO

                NGE

                DSS

                I

                SST

                S Y tota

                lchl

                orop

                hyll

                (d) Correlations with macronutrients (n= 51)

                [NOx ] minus 077 -039 023 004 053 minus 043 minus 072 054 minus014 012[PO4] minus 073 minus 056 minus007 minus026 062 minus 052 minus 070 039 minus013 minus010[SiO4] minus 056 minus 042 026 minus005 040 minus 049 minus 063 039 009 022

                (e) Correlations with macronutrients (n= 26 later-in-season 50 of samples)

                [NOx ] minus018 minus 058 minus005 minus025 minus023 minus019 002 027 minus017 ndash[PO4] minus013 minus 074 minus051 minus 068 009 minus031 minus001 003 minus002 ndash[SiO4] minus010 minus051 minus004 minus031 minus016 minus035 minus044 minus005 034 ndash

                Figure 4 Maxima of SAM influence on phytoplankton community composition SAMprior was determined relative to sample collection thedepicted solid line represents the average temporal location of the 97 d period and the broken lines represent the earliest and latest extent ofthe range associated with the earliest and latest samples

                collection for each sample and comprised the average of the97 daily SAM estimates centred 102 d prior to each samplecollection date It explained 99 of the variance in phy-toplankton composition (SAMprior Fig 3b Table 1a) Notethat SAMprior and SAMspring temporally overlapped to vary-ing extents across the 52 samples (Fig 4) and so were notentirely independent covariates for example a sample col-lected in the summer had previous days contributing to bothSAMprior and SAMspring

                The optimum CAP model contained four covariates thatexplained the variance in phytoplankton community com-position among samples (Table 1b) While four CAP axeswere statistically significant (p lt 005) the first two axes to-gether explained a total of 311 of the variance in phyto-plankton community composition and the third and fourthaxes together only explained a further 64 (not tabu-lated) Thus Fig 6a illustrates most of the variance explainedby the CAP analysis SAMautumn explained the most vari-ance in community composition (126 ) and SAMprior ex-plained a further 43 of variance (Table 1b) These twoSAM indices were moderately and significantly positively

                correlated (r = 051 Table 2c p lt 0001) Both showedsimilar negative correlations (Table 2b) with the relativeabundances of the small diatoms Fragilariopsis rhombica(Fig 5a) and Nitzschia acicularisdecipiens and the coc-colithophorid Emiliana huxleyi and similar positive cor-relations with the abundances of larger diatoms Chaeto-ceros atlanticus Chaetoceros dichaeta and Dactyliosolenantarcticus A further six taxa showed a correlation withSAMautumn but not SAMprior namely positive correla-tions with Chaetoceros concavicorniscurvatus Fragilari-opsis kerguelensis (Fig 5b) Pseudo-nitzschia lineola andThalassiothrix antarctica and negative correlations withDactyliosolen tenuijunctus and the Parmales Three taxashowed correlations with SAMprior but not SAMautumnnamely positive correlations with Chaetoceros neglectus andthe silicoflagellate Dictyocha speculum and a negative cor-relation with Petasaria heterolepis

                In total 15 of the 22 taxa groups showed significantpairwise correlations (p lt 005) with one or more of theSAM indices with SAMautumn being the most influential (Ta-ble 2b) showing significant correlation with 12 of the 22 taxa

                httpsdoiorg105194bg-17-3815-2020 Biogeosciences 17 3815ndash3835 2020

                3824 B L Greaves et al SAM influences phytoplankton in SIZ

                Table3Identifiedtaxa

                groupstaxataxacodecellscountedcellsm

                easuredaverageindividualcellvolum

                eabundance(averagem

                inimum

                andm

                aximum

                )averagerelative

                abundanceaverage

                totalvolumeaverage

                relativevolum

                eandpercentage

                ofsamples

                inw

                hicheach

                taxagroup

                was

                identified

                TaxonTaxa

                codeC

                ellsC

                ellsA

                verageA

                bundanceR

                elativeA

                verageA

                veragevolum

                eSam

                plescounted

                measured

                individualabundance

                totalfraction

                ofw

                ithtaxon

                cellvolume

                averagevolum

                etotalcellvolum

                e

                Average

                Min

                Max

                Num

                berN

                umber

                microm3

                cellsmLminus

                1cellsm

                Lminus

                1cellsm

                Lminus

                1microm

                3m

                Lminus

                1

                Chaetoceros

                atlanticusca

                356479

                131651

                0364

                22

                81382

                14

                90

                Chaetoceros

                castracaneicca

                4834

                9406

                038

                03

                18616

                04

                48

                Chaetoceros

                concavicorniscurvatuscc

                120200

                344320

                0135

                07

                78443

                14

                77

                Chaetoceros

                dichaetacd

                25631943

                491423

                02503

                13

                145999

                29

                94

                Chaetoceros

                neglectuscn

                634488

                17683

                0697

                35

                11906

                02

                81

                Cylindrotheca

                closteriumcyc

                12250

                12117

                079

                07

                410601

                77

                D

                actyliosolenantarcticus

                da277

                472(61

                899)44

                0195

                16

                1860

                68027

                98

                D

                actyliosolentenuijunctus

                dt1981

                13503828

                2967

                131599

                895

                36716

                100

                D

                ictyochaspeculum

                (silicoflagellate)ds

                8184

                492010

                069

                05

                99301

                15

                48

                discoidcentric

                diatoms

                dcx965

                12808572

                13312

                69652

                437

                55673

                100

                E

                miliania

                huxleyi(haptophyte)ehu

                17370

                6524

                0192

                08

                355201

                58

                Fragilariopsis

                cylindruscurtafcx

                39873013

                70632

                08796

                17

                44167

                09

                98

                Fragilariopsiskerguelensis

                fk1031

                40553748

                1670

                105458

                369

                49265

                98

                Fragilariopsis

                pseudonanafps

                170115

                35526

                0201

                09

                1899904

                69

                Fragilariopsis

                rhombica

                fr4542

                346936

                65829

                207022

                23359

                06

                100

                Fragilariopsisritscheri

                fri46

                19572

                70

                8602

                11

                02002

                35

                G

                uinardiacylindrus

                guc110

                8110

                40515

                079

                06

                225921

                41

                67

                Nitzschia

                acicularisdecipiensnix

                1133509

                251162

                0977

                57

                46705

                10

                98

                Parmales

                spp(chrysophyte)parm

                3222

                838

                0668

                17

                33400

                27

                Petasaria

                heterolepis(other)

                pet45

                ndash(65)

                70

                18703

                2667

                01

                6

                Pseudonitzschia

                lineolapsl

                681403

                109391

                4376

                41

                8446015

                100

                Thalassiothrix

                antarcticata

                112269

                (63000)

                130

                17206

                314

                42448

                85

                Biogeosciences 17 3815ndash3835 2020 httpsdoiorg105194bg-17-3815-2020

                B L Greaves et al SAM influences phytoplankton in SIZ 3825

                Figure 5 Scatter-plots (a b) examples of phytoplankton taxon relative abundance versus SAMautumn (c) LONGE of sample collectionversus D and (d) [PO4] versus SAMautumn Each figure shows r2 and p associated with the relationship A line of least-squares best fit isprovided to give an indication of trend

                groups When applying the conservative Bonferroni-adjustedα = 00025 seven taxa groups showed significant correlation(p lt 00025) with any SAM index and four with SAMautumn

                SAMprior and SAMspring represented a similar time span inthe spring immediately prior to sampling (Fig 4) and werestrongly and significantly correlated (r = 083 Table 2cp lt 0001) Samples were collected over a calendar rangeof 140 d (20 Octoberndash28 February Table 2a) and thus the97 d period represented by SAMprior varied in its positionin the calendar across the 140 d spread of the 52 samples(Fig 4) SAMprior and SAMspring also showed similar corre-lation signs with taxa group relative abundances (Table 2b)It was not possible however to determine whether the pre-season SAM influence was a spring effect or a prior-to-sampling effect and whilst both appear to be important ex-planatory terms only SAMprior was retained in the optimumCAP model (Table 1b)

                In the optimum multi-covariate CAP model D explainedthe greatest proportion of the observed variance in phyto-plankton community composition (Table 1b) D was signif-icantly correlated (p lt 00025) with SST S and DSSI andthe variable singly captured the most variation in phytoplank-ton community composition associated with seasonal suc-cession Alone it explained 154 of the total variance (Ta-

                ble 1b) with its effect on the phytoplankton community be-ing approximately orthogonal to that of the SAM (Fig 6a) Aweak positive relationship detected between SAMautumn andD indicated a weak trend of sampling later in the springndashsummer period in years with a higher autumn SAM (r =032 Table 2c p = 002) but otherwise the SAM indicesand D were un-related

                A total of 10 taxa groups showed significant correlation(p lt 005) between their relative abundance and D (Ta-ble 2b) Chaetoceros castracanei C neglectus D specu-lum E huxleyi N acicularisdecipiens Parmales P line-ola and the discoid centric diatoms showed negative relative-abundance correlations with D indicating greatest relativeabundance early in the springndashsummer while C concavicor-niscurvatus and C dichaeta showed greater relative abun-dance later in the springndashsummer A negative correlation(minus063 p lt 0001) was detected between the longitude ofindividual sample collection (LONGE) and D indicatingthat samples collected later in the springndashsummer were morelikely to have been collected towards the west in the sampledregion (Table 2c Fig 5c)

                Following cluster analysis similarity profile (SIMPROF)permutation analysis identified seven significantly differentgroups (p lt 005) with samples loosely grouped on the ba-

                httpsdoiorg105194bg-17-3815-2020 Biogeosciences 17 3815ndash3835 2020

                3826 B L Greaves et al SAM influences phytoplankton in SIZ

                Figure 6 (a) CAP analysis of phytoplankton community composition Dots represent individual samples with colours corresponding tosignificant clusters (Fig 6b) The 22 phytoplankton taxagroups are overlain as weighted averages of their sample scores (red abbreviationsafter Fig 2) with positions plotted with a 3-times-larger distance from the origin to more easily visualise their relationships with constrainingenvironmental variables Linear projections of the significant constraining environmental covariates appear as blue arrows the length andangle of which represent the magnitude and direction of influence of each variable on community composition The inset shows the taxalocated close to the origin diatoms fri and cyc collocating (b) Cluster analysis dendrogram of the 52 samples based on similarities inphytoplankton community structure using colour to show seven significantly different groups (numbered 1ndash7 solid lines α = 005) Samplelabels contain season and voyage (eg 0809v2b= austral springndashsummer over 2008ndash2009 voyage designation 2 sample b is the secondsample obtained from the SIZ during that voyage) SAMautumn value SAMprior value and the D value

                sis of their within-season successional maturity (D) and theSAM (Fig 6b) and demonstrated that there were signifi-cant differences between the community composition of thesamples The group structure determined by cluster analy-sis was displayed in the CAP ordination (using colour) todemonstrate that samples that clustered together were indeedclose to one another in the two-dimensional (2D) ordina-tion (Fig 6a) with their positioning further indicating theinfluences of D and the SAM on cluster groupings This lentconfidence that the 2D ordination was a reasonable approx-imation to the full high-dimensional structure As we knewthe values for the environmental covariates for each sam-ple it was possible to determine the correlation between the2D CAP solution and each environmental covariate We dis-played these correlations as a projected vector (arrow) wheredirection indicates the sign and length indicates strengthThis showed samples in clusters 3 and 4 (Fig 6b) were com-monly associated with a more positive SAM while those inclusters 5 6 and 7 were commonly associated with morenegative SAM values Samples in clusters 2 and 5 were com-

                monly collected earlier in the springndashsummer period (lowerD) while those in clusters 1 4 6 and 7 were commonly col-lected later (Fig 6)

                Other considered environmental covariates that did notsignificantly influence community composition were thetime of the day that a sample was collected and the mini-mum latitude reached by sea ice cover in the previous winter(Supplement Table S1)

                These analyses were also undertaken using phytoplanktonabsolute abundances rather than with relative abundances asreported above The analysis of absolute abundance showedsimilar temporal peaks in variance explained (SupplementFig S4) although it explained less variance (SAMautumn ex-plaining 109 SAMspring 91 and SAMprior 92 ) (Ta-ble S3) Individual taxa correlations with SAM indices (Ta-ble S4) showed a similar pattern to those estimated using rel-ative abundances (Table 2b)

                Biogeosciences 17 3815ndash3835 2020 httpsdoiorg105194bg-17-3815-2020

                B L Greaves et al SAM influences phytoplankton in SIZ 3827

                32 Influence of the SAM on phytoplanktonproductivity

                Two indicators of the influence of the SAM on phytoplank-ton productivity were obtained (i) the influence of the SAMon satellite-derived total chlorophyll and (ii) the influence ofthe SAM on macronutrient concentrations indicating nutri-ent drawdown associated with productivity Using the timesand locations of the 52 samples over the 11 years of ourstudy satellite-derived total chlorophyll showed positive cor-relation with all SAM indices r = 050 (p lt 0001) withSAMautumn r = 072 (p lt 0001) with SAMprior and r =069 (p lt 0001) with SAMspring (Table 2c) Peaks in thecorrelation of total chlorophyll with the SAM were evidentin the preceding autumn and spring and prior to sampling inresponse surfaces for NASA satellite total chlorophyll alongwith a peak in early winter (Fig S1) While further data arerequired to confirm this correlation the results obtained inthis study supported the presence of a positive relationshipbetween productivity and the SAM

                The observed concentrations of the macronutrients NOx PO4 and SiO4 showed significant negative correlationswith SAMautumn (r =minus039 minus056 minus042 respectively Ta-ble 2d p 0005 lt 0001 0002 respectively) The concen-trations of these nutrients showed stronger negative correla-tions with SAMautumn when the 50 of samples collectedlatest in the springndashsummer season was considered (r =minus058 minus074 minus051 Table 2e p 0002 lt 0001 0008respectively) Macronutrient concentrations were unrelatedto either SAMprior or SAMspring (Table 2d) Peaks in neg-ative correlation of the SAM on [PO4] were evident in thepreceding autumn and spring prior to sampling in responsesurfaces with the peaks being more negative when only the50 of samples collected later in the springndashsummer wereconsidered (Fig S2) The concentrations of macronutrientsalso showed expected decline through the springndashsummercorrelations between [NOx] [PO4] and [SiO4] withD wereminus077minus073 andminus056 respectively (Table 2d p lt 0001lt 0001 lt 0001 respectively)

                33 Observed occurrence and abundance

                Abundance of individual taxa groups averaged 133 cells permillilitre and ranged to a maximum of 8796 cells per mL (Ta-ble 3) Individual cell volume ranged from 8 microm3 for the Par-males spp to gt 60 000 microm3 for the diatoms Dactyliosolenantarcticus and Thalassiothrix antarctica Average relativeabundance ranged from 02 for the diatom Fragilariopsisritscheri to 17 for the combined taxa group Fragilariop-sis cylindruscurta Of the 22 taxa groups resolved in thisstudy four taxa groups were identified in all 52 samples and11 taxa groups were identified in more than 90 of samples(Table 3)

                4 Discussion

                41 The SAM and phytoplankton communitycomposition

                Our results show that the SAM shows a relationship withthe community composition of phytoplankton in the sea-sonal ice zone (SIZ) of the Southern Ocean (SO) This con-clusion was supported by a combination of three analyses(i) Permutation-based analyses of cluster structure demon-strated that the 52 samples were separable into seven statisti-cally different groups on the basis of community abundancecomposition of the 22 taxa groups (Fig 6b) and thus thatthere was variation between samples that might be explain-able with known environmental variables if clustering hadrevealed few or no clusters it would have been indicative oflevels of community variance (either high or low) unlikelyto be systematically explainable with the environmental vari-ables (ii) CAP analysis identified the SAM as a significantexplanatory variable on the structure of the phytoplanktoncommunity (Table 1b) and showed that groups identified incluster analysis were generally distinguished by the SAMand the D that a sample was collected (Fig 6) (iii) 15 ofthe 22 taxa groups resolved showed significant pairwise cor-relations (p lt 005) between relative abundance and at leastone of the three derived SAM indices (Table 2b)

                The derived SAM index with greatest influence on phy-toplankton community composition SAMautumn (Figs 3 4)explained 126 of the variance of phytoplankton commu-nity composition in the optimum multi-variable CAP model(Table 1b) SAMautumn represented the average SAM aroundthe time that sea ice was extending northward through theSIZ (Fig 1a) At this time phytoplankton productivity inthe SIZ would have declined to around 30 of its mid-summer maximum (Moore and Abbott 2000 Arrigo et al2008 Constable et al 2014) and phytoplankton would bepreparing for winter by variously producing energy stor-age products producing resting spores or cysts reducingmetabolic rate and engaging in heterotrophic consumptionfor energy (Fryxell 1989 McMinn and Martin 2013) Theformation of sea ice reduces available light by as much as999 (McMinn et al 1999) severely limiting light forphytoplankton for around half of each year at the rangeof longitude sampled latitude 64 S was covered in seaice for half the time across the sampled years (Fig 1a)Windier conditions associated with a more positive SAM inautumn may delay the consolidation of sea ice into largerfloes (Roach et al 2018) extending the phytoplankton grow-ing season and possibly increasing the relative abundanceof taxa that occur later in the springndashsummer season Thequantity of phytoplankton that survive the Antarctic winteris extremely low (McMinn and Martin 2013) and the abun-dance of taxa present and their metabolic condition whenthe autumn sea ice forms may strongly influence their vi-ability relative vigour and availability to seed the subse-

                httpsdoiorg105194bg-17-3815-2020 Biogeosciences 17 3815ndash3835 2020

                3828 B L Greaves et al SAM influences phytoplankton in SIZ

                quent post-winter bloom This possibility was supported bythe observation that the only two taxa groups observed tohave significantly (p lt 005) higher relative abundance laterin the springndashsummer the Chaetoceros species C dichaetaand C concavicorniscurvatus were both observed to alsoshow significantly higher relative abundances when the pre-ceding SAMautumn was more positive (Table 2b) Thus SAM-induced effects on phytoplankton in the autumn could wellinfluence the phytoplankton community structure in the fol-lowing post-winter productive season

                Extending the springndashsummer productive season by de-laying the autumn consolidation of sea ice may result inmore prolonged declines in relative abundance of taxa thatare more prolific earlier in the springndashsummer and may thusreduce the population from which the following post-winterbloom is initiated Of the eight taxa groups showing sta-tistically higher relative abundance earlier in the springndashsummer (p lt 005) three showed corresponding statisticallylower relative abundances with higher preceding SAMautumn(Emiliana huxleyi Nitzschia acicularisdecipiens and Par-males spp p lt 005 Table 2b) supporting this conjec-ture Of the remaining five taxa groups of the eight fourshowed no detectable relationship with SAMautumn and one(Pseudonitzschia lineola) showed a positive relationship

                Two other derived SAM indices were found to influencephytoplankton SAMspring and SAMprior These indices weredifficult to distinguish due to their largely overlapping timeperiods (Fig 4) and they were strongly correlated (r = 083p lt 005 Table 2c) with similar influence on taxonomicabundances (Table 2b) SAMprior was the preferred parame-ter for the multiparameter CAP model in which it explained43 of total variance Windier and stormier conditions as-sociated with a higher SAM in the months prior to sam-pling would increase nutrient input to the euphotic zone fromdeeper waters (Lovenduski and Gruber 2005) promotingproductivity whilst at the same time episodically dilutingsurface phytoplankton through deeper mixing More stormyconditions may also have brought about a faster break-upof winter sea ice promoting earlier spring phytoplanktongrowth Conversely windier conditions would also restrictstratification of the surface ocean precluding phytoplanktonbloom formation lessening productivity (Fitch and Moore2007) and reducing the abundance of early blooming taxaThis may explain the responses of Emiliania huxleyi and thecombined Nitzschia acicularisdecipiens group which bothshowed early maximum abundances (r =minus028 and minus047respectively with D p lt 005 Table 2b) and also nega-tive correlations with SAMspring and SAMprior (r =minus029to minus042 p lt 005 Table 2b) Five other taxa groups withearly maximum abundance (negative correlation with Dp lt 005) showed no detectable correlation with SAMspringand one (Pseudonitzschia lineola) showed a positive rela-tionship indicating that their abundances were determinedby environmental factors that prevail early in the season butnot those factors altered by variations in the SAM Histori-

                cally the variance in the SAM is lower in the spring quar-ter than in other quarters (NOAA 2005) perhaps explainingwhy SAMspring and SAMprior explained less variance in com-munity composition than SAMautumn

                We expected the SAM prior to sampling (SAMprior andSAMspring) would show a relationship with phytoplanktoncomposition and a lesser relationship of the SAM in thewinter is plausible because the surface of the ocean is in-sulated from atmospheric conditions by sea ice The relation-ship with the SAM the previous autumn was not expected butis also plausible as it coincides with the time when sea ice isforming and thus a critical time for phytoplankton preparingto hibernate the half-year of sea ice cover We also observeda similar relationship between SAMautumn and (i) NASAsatellite total chlorophyll and (ii) macronutrient concentra-tions across all samples as well as (iii) a stronger correla-tion with macronutrient concentrations when only the sam-ples collected in the latter half of the season were considered(Table 2c d and e respectively) We also observed maximain the autumn SAM relationship in response-surface analy-ses of the correlation between the SAM and (i) NASA satel-lite total chlorophyll and (ii) [PO4] in all samples as well as(iii) a stronger maxima with [PO4] when only the samplescollected later in the season were considered (Figs S1 andS2) Both total chlorophyll and [PO4] were observationallyindependent of the taxonomic cell counts and whilst [PO4]was estimated from parallel samples as the taxonomic analy-sis NASA satellite total chlorophyll had no material connec-tion with collected samples being linked only geographicallyand temporally and thus offers independent support for theunexpected observation that phytoplankton community com-position in the springndashsummer is related to the SAM in theprevious autumn The empirically defined SAMautumn alsoshowed significant (p lt 005) pairwise correlations with 12of the 22 taxa groups resolved (Table 2b)

                42 Effect of the SAM on phytoplankton taxa

                Nothing has been previously reported with respect to the cli-matic preferences of the majority of taxa identified in thisstudy and only 10 of the 22 taxa groups considered in ourresearch had data records in the Ocean Biogeographic In-formation System (OBIS 2020) Some of the observed taxahave been reported to show various relationships with en-vironmental factors including sea-surface temperature timethrough the season and latitude but often at the taxonomiclevel of genera rather than at a species level (Burckle et al1987 Chiba et al 2000 Waters et al 2000 Green and Sam-brotto 2006 Gomi et al 2007) We however observed dif-fering responses to environmental variables among closelyrelated taxa This was exemplified by the opposite correla-tions of Chaetoceros species C dicheata and C neglectuswith D (048 and minus070 respectively p lt 00025 Table 2b)and the opposite correlations of Fragilariopsis species Frhombica and F kerguelensis with SAMautumn (minus039 and

                Biogeosciences 17 3815ndash3835 2020 httpsdoiorg105194bg-17-3815-2020

                B L Greaves et al SAM influences phytoplankton in SIZ 3829

                052 respectively p lt 005 Table 2b Fig 5a b) The strongand opposite response to these variables by species belong-ing to the same genus indicates the importance of species-level observation in detecting subtle changes in pelagic phy-toplankton communities

                A third of analysed taxa comprising 7 taxa and 23 of all counted cells showed no detectable relationship withthe SAM This could be due to large errors associated withlow counts of rarer taxa because unaccounted variation wasmasking any relationship or because the taxa were insensi-tive to the SAM There is less chance of detecting relation-ships between taxa and environment variables when fewerindividuals are counted however some less represented taxadid show relationships with SAM indices (eg Emilianiahuxleyi |r|gt 038 Table 2b) Of the 22 taxa resolved 5showed no significant relationships with either the SAM orD All were comparatively scarce and together representedonly 2 of all cells counted Assessing species composi-tions across a greater fraction of each sample and thus count-ing more of the scarcer taxa may have revealed relationshipsbetween these rarer taxa and environmental variables (Nak-agawa and Cuthill 2007) Yet it remains possible that thesetaxa are actually unaffected by seasonal succession and theSAM instead responding to other environmental variablesthat were not measured as part of this study or that they re-main as persistent but relatively rare background taxa withrespect to the overall phytoplankton assemblage

                This is the first study to show a link between variationin the SAM and the composition of phytoplankton commu-nities in the SO although similar findings have been re-ported for other major climatic phenomena in other partsof the globe The climatically similar Northern HemisphereAnnular Mode (NAM) causes increased westerly winds anddeeper mixed layers at middle to high northern latitudes inits positive phase (Nehring 1998 Thompson et al 2003Kahru et al 2011) The NAM has been related to the tim-ing abundance and biomass of phytoplankton taxa at highnorthern latitudes (Nehring 1998 Belgrano et al 1999 Ot-tersen et al 2001 Blenckner and Hillebrand 2002) andto the delayed occurrence of maximum chlorophyll in theNorth Atlantic Summer (Kahru et al 2011) Similarly theEl NintildeondashSouthern Oscillation (ENSO) equatorial mode hasbeen shown to influence the distribution and abundance ofphytoplankton in the tropical oceans (Blanchot et al 1992)

                Phytoplankton are the pastures of the oceans and it is plau-sible that the climate in both autumn and spring influencethe phytoplankton community composition of phytoplank-ton and their ecological progression through the productivespringndashsummer period in the SIZ Climate change impactshave now been documented across every type of ecosystemon Earth (Scheffers et al 2016 Harris et al 2018) and thedistribution abundance phenology and productivity of phy-toplankton communities throughout the world are changingin response to warming acidifying and stratifying oceans(Hoegh-Guldberg and Bruno 2010) We have detected an

                association between variation in phytoplankton communitycomposition and variation in the SAM over a relatively brief11-year monitoring period despite all the other environmen-tal factors that elicit variability in phytoplankton communi-ties in the SIZ of the SO

                43 The effects of the SAM on productivity andbiomass

                A positive SAM has previously been shown to be associ-ated with increased standing stocks and productivity of phy-toplankton in the SIZ of the SO (Arrigo et al 2008 Boyce etal 2010 Soppa et al 2016) In the SIZ above the AntarcticDivergence nutrients are replenished from the deeper oceanthrough the unproductive winter and the levels of nutritionremaining at the end of summer integrate the total draw-down of nutrients by phytoplankton production over the en-tire springndashsummer growing season (Arrigo et al 1999) Weobserved this nutrient drawdown through the springndashsummeras the negative correlation between all macronutrient con-centrations and D (Table 2d) We also observed a nega-tive relationship between all macronutrient concentrations inthe springndashsummer and the previous SAMautumn (Table 2dFig 5d) suggesting that an elevated SAM in autumn leadsto greater productivity and thus greater nutrient drawdownduring the following springndashsummer The nutrient concen-trations at the end of the springndashsummer productive seasonwould be expected to best represent the total productivityover the season we observed that the correlation between nu-trient concentrations and SAMautumn were higher when onlythe 50 of samples collected later in the springndashsummerwere considered (Table 2e) further supporting the conjec-ture that a higher SAM in the autumn is linked with greaterproductivity through the following springndashsummer

                The observed positive relationship between total chloro-phyll and all the SAM indices (r = 05 to 072 p lt 00025Table 2c) and the presence of apparent spring and autumnmaxima in the response surfaces of the variance in totalchlorophyll explained by the SAM (Fig S1) further sup-port the conjecture that a more positive SAM is linked withgreater total chlorophyll and thus greater total productivityin the SIZ The total chlorophyll data considered were limitedto the 52 samples collected that is estimated for the timesand locations of each sample collection Estimates werecoarsely determined as interpolations of available monthlypredictions (Fig S3) and estimates could be thus obtainedfor only 49 of the 52 samples Yet there are indicators of re-liability in the sparse information the diatom Fragilariopsisrhombica is always relatively small (Table 3) and when therelative abundance of this taxon was high total chlorophyllwas lower (r =minus059 p lt 00025 Table 2b) and when therelative abundance of larger diatoms were high total chloro-phyll was also often high (eg Dactyliosolen antarcticusr = 037 p lt 005 Table 2b)

                httpsdoiorg105194bg-17-3815-2020 Biogeosciences 17 3815ndash3835 2020

                3830 B L Greaves et al SAM influences phytoplankton in SIZ

                44 Implications

                The SIZ is a productive region of the SO (Moore and Abbott2000) and changes to the SIZ phytoplankton communityhave potentially far-reaching implications for the ecosystemservices these organisms provide including carbon exportto the deep ocean and supporting the productivity of almostall Antarctic life Increases in the relative abundance of thelarger Chaetoceros spp diatoms would favour grazing bylarge metazooplankton especially krill (Boyd et al 1984Kawaguchi et al 1999 Moline et al 2004) which linkphytoplankton to whales seabirds seals and most higherAntarctic life forms (Smetacek 2008) Such changes wouldalso increase the efficiency of the biological pump as thelarger phytoplankton sink more rapidly than small phyto-plankton (Alldredge and Gotschalk 1989) and increasedgrazing by krill would reparcel some phytoplankton biomassinto faeces that would also sink more rapidly (Cadeacutee etal 1992) Such changes in carbon flux and trophodynam-ics would act as a negative feedback on climate change byspeeding the sequestration of carbon to the deep ocean

                The SAM is predicted to become increasingly positivein the future (Arblaster and Meehl 2006 Swart and Fyfe2012 Gillett and Fyfe 2013 Abram et al 2014 Solomonet al 2016) Our results cannot necessarily be extrapolatedto infer changes that will likely occur as the SAM contin-ues to increase as evolutionary responses can partly miti-gate adverse effects on phytoplankton of longer-term climatechange and future changes in climate are likely to imposeother co-stressors on phytoplankton inhabiting these waters(Lohbeck et al 2014 Schluumlter et al 2014 Deppeler andDavidson 2017) Our study showed that some of the vari-ation in the phytoplankton composition in the seasonal icezone was significantly related to variation in the SAM andthat the sign and magnitude of the correlation with the SAMdiffered among species

                5 Conclusions

                Statistical analyses indicated that together the autumn andspring SAM explained a higher percentage (179 ) of thevariation in phytoplankton community composition than anyvariable mostly due to the autumn SAM (up to 133 ) Intotal this exceeded the variance explained by any other vari-able even that attributable to the time of the season thatthe sample was collected (154 ) or other critical phys-ical variables such as temperature salinity and latitudeFurthermore 15 of the 22 phytoplankton taxa identified inthis study showed significant correlation with the SAM andthere were indications that a more positive SAM was relatedto increased phytoplankton productivity in the SIZ Whilethis study was limited in both timespan (11 austral springndashsummers) and the overall variance in phytoplankton compo-sition explained by all the constraining variables (375 ) it

                suggests that the phytoplankton of the SIZ are indeed sensi-tive to changes in the SAM and thus possibly responsive toclimate change

                Data availability The dataset used in this paper is available athttpsdoiorg10261795d9181f7308bd (Greaves et al 2019)

                Supplement The supplement related to this article is available on-line at httpsdoiorg105194bg-17-3815-2020-supplement

                Author contributions Author contributions BLG contributed toconceptualisation data curation formal analysis investigationmethodology software and supervision validation visualisationwriting of the original draft writing and review and editing ATDcontributed to conceptualisation funding acquisition formal anal-ysis methodology project administration resources supervisionwriting and review and editing ADF contributed to formal analy-sis methodology resources writing and review and editing JPMcontributed to formal analysis methodology software writing andreview and editing AM contributed to project administration su-pervision writing and review and editing AMcM contributed tofunding acquisition project administration resources writing andreview and editing SWM contributed to conceptualisation fund-ing acquisition formal analysis writing and review and editing

                Competing interests The authors declare that they have no conflictof interest

                Acknowledgements Sampling on Astrolabe was supported bya FrenchndashAustralian research collaboration The Institut PolaireFranccedilais Paul-Eacutemile-Victor supported access to the ship and fieldoperations The biogeochemical data collection was coordinatedby Alain Poisson and Nicolas Metzl Sorbonne Universiteacute andBronte Tilbrook CSIRO Oceans and Atmosphere Steve Rintoul(CSIRO) and Rose Morrow (LEGOS) coordinated the collection ofsalinity and temperature data The Antarctic Climate and Ecosys-tems CRC and the Integrated Marine Observing System are thankedfor supporting the operation of sensors the collection of water sam-ples and nutrient analyses reported in this study Alan Poole MattSherlock John Akl Kate Berry Lesley Clementson Brian Grif-fiths (CSIRO) Rick van den Enden Rob Johnson (AAD) and themany dedicated volunteers and shipsrsquo officers and crew are thankedfor their important contributions to the field efforts and data man-agement We thank the University of Tasmania and the AustralianAntarctic Division for the space and resources needed to undertakethis work Thanks to Nathaniel Bindoff and Simon Wotherspoon fortheir consideration of parts of the paper Thanks are due to the re-viewer Damiano Righetti for the valuable input he provided in par-ticular for pointing out ambiguities and small errors and improvingthe clarity of the paper and an anonymous reviewer for the struc-tural and theoretical considerations Total chlorophyll data used inthis paper were produced with the Giovanni online data system de-veloped and maintained by the NASA GES DISC

                Biogeosciences 17 3815ndash3835 2020 httpsdoiorg105194bg-17-3815-2020

                B L Greaves et al SAM influences phytoplankton in SIZ 3831

                Financial support This research has been supported by the Uni-versity of Tasmania (Institute of Marine and Antarctic Studies) bythe Australian Governmentrsquos Cooperative Research Centre programthrough the Antarctic Climate and Ecosystems CRC the AustralianAntarctic Division (projects 40 and 4107) and by the Australian Re-search Councilrsquos Special Research Initiative for Antarctic GatewayPartnership (project no SR140300001)

                Review statement This paper was edited by Julia Uitz and re-viewed by Damiano Righetti and one anonymous referee

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                Lovenduski N S and Gruber N Impact of the Southern AnnularMode on Southern Ocean circulation and biology Geophys ResLett 32 1ndash4 httpsdoiorg1010292005GL022727 2005

                Mackas D L Does blending of chlorophylldata bias temporal trend Nature 472 E4ndashE5httpsdoiorg101038nature09951 2011

                Mackintosh A N Anderson B M Lorrey A M Renwick JA Frei P and Dean S M Regional cooling caused recentNew Zealand glacier advances in a period of global warmingNat Commun 8 1ndash13 httpsdoiorg101038ncomms142022017

                Marshall G J Trends in the Southern Annu-lar Mode from Observations and Reanalyses JClim 16 4134ndash4143 httpsdoiorg1011751520-0442(2003)016lt4134TITSAMgt20CO2 2003

                Marshall G J Half-century seasonal relationships between theSouthern Annular mode and Antarctic temperatures Int J Cli-matol 27 373ndash383 httpsdoiorg101002joc1407 2007

                Martin A McMinn A Heath M Hegseth E N and Ryan KG The physiological response to increased temperature in over-wintering sea ice algae and phytoplankton in McMurdo SoundAntarctica and Tromsoslash Sound Norway J Exp Mar Biol Ecol428 57ndash66 httpsdoiorg101016jjembe201206006 2012

                Massom R A and Stammerjohn S E Antarctic sea ice changeand variability ndash Physical and ecological implications Polar Sci4 149ndash186 httpsdoiorg101016jpolar201005001 2010

                McMinn A Ashworth C and Ryan K Growth and Productivityof Antarctic Sea Ice Algae under PAR and UV Irradiances BotMar 42 401ndash407 httpsdoiorg101515BOT1999046 1999

                McMinn A and Martin A Dark survival in awarming world P Roy Soc B 280 20122909httpsdoiorg101098rspb20122909 2013

                Meredith M P Murphy E J Hawker E J King JC and Wallace M I On the interannual variability ofocean temperatures around South Georgia Southern OceanForcing by El NintildeoSouthern Oscillation and the South-ern Annular Mode Deep-Sea Res Pt II 55 2007ndash2022httpsdoiorg101016jdsr2200805020 2008

                Mo K C Relationships between low-frequency variability inthe Southern Hemisphere and sea surface temperature anoma-lies J Clim 13 3599ndash3610 httpsdoiorg1011751520-0442(2000)013lt3599rblfvigt20co2 2000

                Moline M A Claustre H Frazer T K Schofield O andVernet M Alteration of the food web along the Antarc-tic Peninsula in response to a regional warming trend GlobChange Biol 10 1973ndash1980 httpsdoiorg101111j1365-2486200400825x 2004

                Moore J K and Abbott M R Phytoplankton chloro-phyll distributions and primary production in the South-ern Ocean J Geophys Res-Ocean 105 28709ndash28722httpsdoiorg1010291999JC000043 2000

                Nakagawa S A farewell to Bonferroni the problems of low sta-tistical power and publication bias Behav Ecol 15 1044ndash1045httpsdoiorg101093behecoarh107 2004

                Nakagawa S and Cuthill I C Effect size confidence inter-val and statistical significance a practical guide for biolo-gists Biol Rev 82 591ndash605 httpsdoiorg101111j1469-185X200700027x 2007

                Nehring S Establishment of thermophilic phytoplankton speciesin the North Sea biological indicators of climatic changesShort communication ICES J Mar Sci 55 818ndash823httpsdoiorg101006jmsc19980389 1998

                NOAA Teleconnection Pattern Calculation ProceduresClimate Prediction Center Internet Team available athttpswwwcpcncepnoaagovproductsprecipCWlinkdaily_ao_indexhistorymethodshtmlvar (last access 15 June 2017)2005

                NOAA NCEP-DOE Reanalysis 2 data provided by theNOAAOARESRL PSD Boulder Colorado USA available athttpswwwcpcncepnoaagovproductsprecipCWlinkENSOverfnewaaoshtml last access 25 June 2017

                OBIS Ocean Biogeographic Information System Intergovernmen-tal Oceanographic Commission of UNESCO available at httpwwwiobisorg last access 18 February 2020

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                3834 B L Greaves et al SAM influences phytoplankton in SIZ

                Ottersen G Planque B Belgrano A Post E ReidP C and Stenseth N C Ecological effects of theNorth Atlantic Oscillation Oecologia 128 1ndash14httpsdoiorg101007s004420100655 2001

                Parkinson C L A 40-y record reveals gradual Antarctic sea iceincreases followed by decreases at rates far exceeding the ratesseen in the Arctic P Natl Acad Sci USA 116 14414ndash14423httpsdoiorg101073pnas1906556116 2019

                R Core Team R A Language and Environment for Statistical Com-puting R Foundation for Statistical Computing Vienna Austria2016

                Rigual-Hernaacutendez A S Trull T W Bray S G Closset Iand Armand L K Seasonal dynamics in diatom and par-ticulate export fluxes to the deep sea in the Australian sec-tor of the southern Antarctic Zone J Mar Syst 142 62ndash74httpsdoiorg101016jjmarsys201410002 2015

                Roach L A Smith M M and Dean S M Quantify-ing growth of pancake sea ice floes using images fromdrifting buoys J Geophys Res-Ocean 123 2851ndash2866httpsdoiorg1010022017JC013693 2018

                Rodgers J L and Nicewander W A Thirteen Ways toLook at the Correlation Coefficient Am Stat 42 59ndash66httpsdoiorg10108000031305198810475524 1988

                Saenz B T and Arrigo K R Annual primary produc-tion in Antarctic sea ice during 2005-2006 from a sea icestate estimate J Geophys Res-Ocean 119 3645ndash3678httpsdoiorg1010022013JC009677 2014

                Sarthou G Timmermans K R Blain S and Treacuteguer P Growthphysiology and fate of diatoms in the ocean a review J Sea Res53 25ndash42 httpsdoiorg101016jseares200401007 2005

                Savidge G Priddle J Gilpin L C Bathmann U Murphy EJ Owens N J P Pollard R T Turner D R Veth C andBoyd P An assessment of the role of the marginal ice zone inthe carbon cycle of the Southern Ocean Antarct Sci 8 349ndash358 httpsdoiorg101017S0954102096000521 1996

                Scheffers B R De Meester L Bridge T C L HoffmannA A Pandolfi J M Corlett R T Butchart S H MPearce-Kelly P Kovacs K M Dudgeon D Pacifici MRondinini C Foden W B Martin T G Mora C Bick-ford D and Watson J E M The broad footprint of climatechange from genes to biomes to people Science 354 aaf7671httpsdoiorg101126scienceaaf7671 2016

                Schiermeier Q Atmospheric science fixing the sky Nature 460792ndash795 httpsdoiorg101038460792a 2009

                Schluumlter L Lohbeck K T Gutowska M A Groumlger J P Riebe-sell U and Reusch T B H Adaptation of a globally importantcoccolithophore to ocean warming and acidification Nat ClimChange 4 1024ndash1030 httpsdoiorg101038nclimate23792014

                Scott F J and Marchant H J (Eds) Antarctic marine protistsAustralian Biological Resources Study Canberra and HobartAustralia 541 pp httpsdoiorg101017s00322474052448192005

                Sen Gupta A and England M H Coupled oceanndashatmospherendashiceresponse to variations in the Southern Annular Mode J Clim19 4457ndash4486 httpsdoiorg101175JCLI38431 2006

                Smetacek V and Nicol S Polar ocean ecosys-tems in a changing world Nature 437 362ndash368httpsdoiorg101038nature04161 2005

                Smetacek V Are declining krill stocks a result of global warmingor of the decimation of the whales in Impacts of global warmingon polar systems Fundacioacuten BBVA edited by Duarte C MBilbao 47ndash83 2008

                Solomon S Ivy D J Kinnison D Mills M J Neely R R andSchmidt A Emergence of healing in the Antarctic ozone layerScience 353 269ndash274 httpsdoiorg101126scienceaae00612016

                Son S W Tandon N F Polvani L M and Waugh D W Ozonehole and Southern Hemisphere climate change Geophys ResLett 36 1ndash5 httpsdoiorg1010292009GL038671 2009

                Soppa M Voumllker C and Bracher A Diatom Phenol-ogy in the Southern Ocean Mean Patterns Trends andthe Role of Climate Oscillations Remote Sens 8 1ndash7httpsdoiorg103390rs8050420 2016

                Spreen G Kaleschke L and Heygster G Sea ice remote sensingusing AMSR-E 89-GHz channels J Geophys Res-Ocean 113C02S03 httpsdoiorg1010292005JC003384 2008

                Squire V A Ocean wave interactions with sea icea reappraisal Annu Rev Fluid Mech 52 37ndash60httpsdoiorg101146annurev-fluid-010719-060301 2020

                Steinacher M Joos F Froumllicher T L Bopp L Cadule PCocco V Doney S C Gehlen M Lindsay K Moore J KSchneider B and Segschneider J Projected 21st century de-crease in marine productivity a multi-model analysis Biogeo-sciences 7 979ndash1005 httpsdoiorg105194bg-7-979-20102010

                Swart N C and Fyfe J C Observed and simulated changes inthe Southern Hemisphere surface westerly wind-stress GeophysRes Lett 39 1ndash6 httpsdoiorg1010292012GL0528102012

                Swart N C Fyfe J C Gillett N and Marshall G J Compar-ing Trends in the Southern Annular Mode and Surface WesterlyJet J Clim 28 8840ndash8859 httpsdoiorg101175JCLI-D-15-03341 2015

                Swiło M Majewski W Minzoni R T and Ander-son J B Diatom assemblages from coastal settingsof West Antarctica Mar Micropaleontol 125 95ndash109httpsdoiorg101016jmarmicro201604001 2016

                Takahashi T Sutherland S C Wanninkhof R Sweeney CFeely R A Chipman D W Hales B Friederich G ChavezF Sabine C Watson A Bakker D C E Schuster U MetzlN Yoshikawa-Inoue H Ishii M Midorikawa T Nojiri YKoumlrtzinger A Steinhoff T Hoppema M Olafsson J Arnar-son T S Tilbrook B Johannessen T Olsen A Bellerby RWong C S Delille B Bates N R and de Baar H J W Cli-matological mean and decadal change in surface ocean pCO2and net seandashair CO2 flux over the global oceans Deep-Sea ResPt II 56 554ndash577 httpsdoiorg101016jdsr22008120092009

                Taljaard J J Development Distribution and Move-ment of Cyclones and Anticyclones in the South-ern Hemisphere During the IGY J Appl Me-teorol 6 973ndash987 httpsdoiorg1011751520-0450(1967)006lt0973DDAMOCgt20CO2 1967

                Taylor F and Sjunneskog C Postglacial marine diatom recordof the Palmer Deep Antarctic Peninsula (ODP Leg 178 Site1098) 2 Diatom assemblages Paleoceanography 17 1ndash12httpsdoiorg1010292000PA000564 2002

                Biogeosciences 17 3815ndash3835 2020 httpsdoiorg105194bg-17-3815-2020

                B L Greaves et al SAM influences phytoplankton in SIZ 3835

                Ter Braak C J and Verdonschot P F Canonical correspondenceanalysis and related multivariate methods in aquatic ecologyAquat Sci 57 255ndash289 httpsdoiorg101007BF008774301995

                Thompson D W Lee S and Baldwin M P Atmospheric pro-cesses governing the northern hemisphere annular modeNorthAtlantic oscillation Geoph Monog Series 134 81ndash112 2003

                Thompson D W Solomon S Kushner P J England M HGrise K M and Karoly D J Signatures of the Antarcticozone hole in Southern Hemisphere surface climate change NatGeosci 4 741ndash749 2011

                Thompson D W J and Solomon S Interpretation of RecentSouthern Hemisphere Climate Change Science 296 895ndash899httpsdoiorg101126science1069270 2002

                Tomas C R (Ed) Identifying marine phytoplankton Academicpress San Diego California 858 pp 1997

                Turner J Bracegirdle T J Phillips T Marshall G J and Hosk-ing J S An initial assessment of Antarctic sea ice extent in theCMIP5 models J Clim 26 1473ndash1484 2013

                Turner J Summerhayes C Sparrow M Mayewski P ConveyP di Prisco G Gutt J Hodgson D Speich S Worby TBo S and Klepikov A Antarctic climate change and the envi-ronment ndash 2015 update Antarctic Treaty Consultative MeetingSofia Bulgaria June 2015 IP 92 2015

                Waters R L Van Den Enden R and Marchant H J Summer mi-crobial ecology off East Antarctica (80ndash150 E) protistan com-munity structure and bacterial abundance Deep-Sea Res Pt II47 2401ndash2435 httpsdoiorg101016S0967-0645(00)00030-8 2000

                Webb T and Bryson R A Late-and postglacial climatic changein the northern Midwest USA quantitative estimates derivedfrom fossil pollen spectra by multivariate statistical analy-sis Quaternary Res 2 70ndash115 httpsdoiorg1010160033-5894(72)90005-1 1972

                Whitaker D and Christman M clustsig Significant Cluster Anal-ysis R package version 11 2014

                Wilson D L Smith Jr W O and Nelson D M Phytoplanktonbloom dynamics of the western Ross Sea ice edge ndash I Primaryproductivity and species-specific production Deep-Sea Res PtI 33 1375ndash1387 httpsdoiorg1010160198-0149(86)90041-5 1986

                Wright S W van den Enden R L Pearce I David-son A T Scott F J and Westwood K J Phyto-plankton community structure and stocks in the SouthernOcean (30ndash80 E) determined by CHEMTAX analysis ofHPLC pigment signatures Deep-Sea Res Pt II 57 758ndash778httpsdoiorg101016jdsr2200906015 2010

                httpsdoiorg105194bg-17-3815-2020 Biogeosciences 17 3815ndash3835 2020

                • Abstract
                • Introduction
                  • Importance of the SIZ phytoplankton bloom
                  • The Southern Annular Mode
                  • The hypothesis
                    • Methods
                      • Phytoplankton relative abundance
                      • Environmental covariates
                      • Statistical analysis
                        • Results
                          • The influence of the SAM on phytoplankton community composition
                          • Influence of the SAM on phytoplankton productivity
                          • Observed occurrence and abundance
                            • Discussion
                              • The SAM and phytoplankton community composition
                              • Effect of the SAM on phytoplankton taxa
                              • The effects of the SAM on productivity and biomass
                              • Implications
                                • Conclusions
                                • Data availability
                                • Supplement
                                • Author contributions
                                • Competing interests
                                • Acknowledgements
                                • Financial support
                                • Review statement
                                • References

                  B L Greaves et al SAM influences phytoplankton in SIZ 3823

                  Table 2 Continued

                  Environmental variables

                  D SAM

                  autu

                  mn

                  SAM

                  prio

                  r

                  SAM

                  spri

                  ng

                  LO

                  NGE

                  DSS

                  I

                  SST

                  S Y tota

                  lchl

                  orop

                  hyll

                  (d) Correlations with macronutrients (n= 51)

                  [NOx ] minus 077 -039 023 004 053 minus 043 minus 072 054 minus014 012[PO4] minus 073 minus 056 minus007 minus026 062 minus 052 minus 070 039 minus013 minus010[SiO4] minus 056 minus 042 026 minus005 040 minus 049 minus 063 039 009 022

                  (e) Correlations with macronutrients (n= 26 later-in-season 50 of samples)

                  [NOx ] minus018 minus 058 minus005 minus025 minus023 minus019 002 027 minus017 ndash[PO4] minus013 minus 074 minus051 minus 068 009 minus031 minus001 003 minus002 ndash[SiO4] minus010 minus051 minus004 minus031 minus016 minus035 minus044 minus005 034 ndash

                  Figure 4 Maxima of SAM influence on phytoplankton community composition SAMprior was determined relative to sample collection thedepicted solid line represents the average temporal location of the 97 d period and the broken lines represent the earliest and latest extent ofthe range associated with the earliest and latest samples

                  collection for each sample and comprised the average of the97 daily SAM estimates centred 102 d prior to each samplecollection date It explained 99 of the variance in phy-toplankton composition (SAMprior Fig 3b Table 1a) Notethat SAMprior and SAMspring temporally overlapped to vary-ing extents across the 52 samples (Fig 4) and so were notentirely independent covariates for example a sample col-lected in the summer had previous days contributing to bothSAMprior and SAMspring

                  The optimum CAP model contained four covariates thatexplained the variance in phytoplankton community com-position among samples (Table 1b) While four CAP axeswere statistically significant (p lt 005) the first two axes to-gether explained a total of 311 of the variance in phyto-plankton community composition and the third and fourthaxes together only explained a further 64 (not tabu-lated) Thus Fig 6a illustrates most of the variance explainedby the CAP analysis SAMautumn explained the most vari-ance in community composition (126 ) and SAMprior ex-plained a further 43 of variance (Table 1b) These twoSAM indices were moderately and significantly positively

                  correlated (r = 051 Table 2c p lt 0001) Both showedsimilar negative correlations (Table 2b) with the relativeabundances of the small diatoms Fragilariopsis rhombica(Fig 5a) and Nitzschia acicularisdecipiens and the coc-colithophorid Emiliana huxleyi and similar positive cor-relations with the abundances of larger diatoms Chaeto-ceros atlanticus Chaetoceros dichaeta and Dactyliosolenantarcticus A further six taxa showed a correlation withSAMautumn but not SAMprior namely positive correla-tions with Chaetoceros concavicorniscurvatus Fragilari-opsis kerguelensis (Fig 5b) Pseudo-nitzschia lineola andThalassiothrix antarctica and negative correlations withDactyliosolen tenuijunctus and the Parmales Three taxashowed correlations with SAMprior but not SAMautumnnamely positive correlations with Chaetoceros neglectus andthe silicoflagellate Dictyocha speculum and a negative cor-relation with Petasaria heterolepis

                  In total 15 of the 22 taxa groups showed significantpairwise correlations (p lt 005) with one or more of theSAM indices with SAMautumn being the most influential (Ta-ble 2b) showing significant correlation with 12 of the 22 taxa

                  httpsdoiorg105194bg-17-3815-2020 Biogeosciences 17 3815ndash3835 2020

                  3824 B L Greaves et al SAM influences phytoplankton in SIZ

                  Table3Identifiedtaxa

                  groupstaxataxacodecellscountedcellsm

                  easuredaverageindividualcellvolum

                  eabundance(averagem

                  inimum

                  andm

                  aximum

                  )averagerelative

                  abundanceaverage

                  totalvolumeaverage

                  relativevolum

                  eandpercentage

                  ofsamples

                  inw

                  hicheach

                  taxagroup

                  was

                  identified

                  TaxonTaxa

                  codeC

                  ellsC

                  ellsA

                  verageA

                  bundanceR

                  elativeA

                  verageA

                  veragevolum

                  eSam

                  plescounted

                  measured

                  individualabundance

                  totalfraction

                  ofw

                  ithtaxon

                  cellvolume

                  averagevolum

                  etotalcellvolum

                  e

                  Average

                  Min

                  Max

                  Num

                  berN

                  umber

                  microm3

                  cellsmLminus

                  1cellsm

                  Lminus

                  1cellsm

                  Lminus

                  1microm

                  3m

                  Lminus

                  1

                  Chaetoceros

                  atlanticusca

                  356479

                  131651

                  0364

                  22

                  81382

                  14

                  90

                  Chaetoceros

                  castracaneicca

                  4834

                  9406

                  038

                  03

                  18616

                  04

                  48

                  Chaetoceros

                  concavicorniscurvatuscc

                  120200

                  344320

                  0135

                  07

                  78443

                  14

                  77

                  Chaetoceros

                  dichaetacd

                  25631943

                  491423

                  02503

                  13

                  145999

                  29

                  94

                  Chaetoceros

                  neglectuscn

                  634488

                  17683

                  0697

                  35

                  11906

                  02

                  81

                  Cylindrotheca

                  closteriumcyc

                  12250

                  12117

                  079

                  07

                  410601

                  77

                  D

                  actyliosolenantarcticus

                  da277

                  472(61

                  899)44

                  0195

                  16

                  1860

                  68027

                  98

                  D

                  actyliosolentenuijunctus

                  dt1981

                  13503828

                  2967

                  131599

                  895

                  36716

                  100

                  D

                  ictyochaspeculum

                  (silicoflagellate)ds

                  8184

                  492010

                  069

                  05

                  99301

                  15

                  48

                  discoidcentric

                  diatoms

                  dcx965

                  12808572

                  13312

                  69652

                  437

                  55673

                  100

                  E

                  miliania

                  huxleyi(haptophyte)ehu

                  17370

                  6524

                  0192

                  08

                  355201

                  58

                  Fragilariopsis

                  cylindruscurtafcx

                  39873013

                  70632

                  08796

                  17

                  44167

                  09

                  98

                  Fragilariopsiskerguelensis

                  fk1031

                  40553748

                  1670

                  105458

                  369

                  49265

                  98

                  Fragilariopsis

                  pseudonanafps

                  170115

                  35526

                  0201

                  09

                  1899904

                  69

                  Fragilariopsis

                  rhombica

                  fr4542

                  346936

                  65829

                  207022

                  23359

                  06

                  100

                  Fragilariopsisritscheri

                  fri46

                  19572

                  70

                  8602

                  11

                  02002

                  35

                  G

                  uinardiacylindrus

                  guc110

                  8110

                  40515

                  079

                  06

                  225921

                  41

                  67

                  Nitzschia

                  acicularisdecipiensnix

                  1133509

                  251162

                  0977

                  57

                  46705

                  10

                  98

                  Parmales

                  spp(chrysophyte)parm

                  3222

                  838

                  0668

                  17

                  33400

                  27

                  Petasaria

                  heterolepis(other)

                  pet45

                  ndash(65)

                  70

                  18703

                  2667

                  01

                  6

                  Pseudonitzschia

                  lineolapsl

                  681403

                  109391

                  4376

                  41

                  8446015

                  100

                  Thalassiothrix

                  antarcticata

                  112269

                  (63000)

                  130

                  17206

                  314

                  42448

                  85

                  Biogeosciences 17 3815ndash3835 2020 httpsdoiorg105194bg-17-3815-2020

                  B L Greaves et al SAM influences phytoplankton in SIZ 3825

                  Figure 5 Scatter-plots (a b) examples of phytoplankton taxon relative abundance versus SAMautumn (c) LONGE of sample collectionversus D and (d) [PO4] versus SAMautumn Each figure shows r2 and p associated with the relationship A line of least-squares best fit isprovided to give an indication of trend

                  groups When applying the conservative Bonferroni-adjustedα = 00025 seven taxa groups showed significant correlation(p lt 00025) with any SAM index and four with SAMautumn

                  SAMprior and SAMspring represented a similar time span inthe spring immediately prior to sampling (Fig 4) and werestrongly and significantly correlated (r = 083 Table 2cp lt 0001) Samples were collected over a calendar rangeof 140 d (20 Octoberndash28 February Table 2a) and thus the97 d period represented by SAMprior varied in its positionin the calendar across the 140 d spread of the 52 samples(Fig 4) SAMprior and SAMspring also showed similar corre-lation signs with taxa group relative abundances (Table 2b)It was not possible however to determine whether the pre-season SAM influence was a spring effect or a prior-to-sampling effect and whilst both appear to be important ex-planatory terms only SAMprior was retained in the optimumCAP model (Table 1b)

                  In the optimum multi-covariate CAP model D explainedthe greatest proportion of the observed variance in phyto-plankton community composition (Table 1b) D was signif-icantly correlated (p lt 00025) with SST S and DSSI andthe variable singly captured the most variation in phytoplank-ton community composition associated with seasonal suc-cession Alone it explained 154 of the total variance (Ta-

                  ble 1b) with its effect on the phytoplankton community be-ing approximately orthogonal to that of the SAM (Fig 6a) Aweak positive relationship detected between SAMautumn andD indicated a weak trend of sampling later in the springndashsummer period in years with a higher autumn SAM (r =032 Table 2c p = 002) but otherwise the SAM indicesand D were un-related

                  A total of 10 taxa groups showed significant correlation(p lt 005) between their relative abundance and D (Ta-ble 2b) Chaetoceros castracanei C neglectus D specu-lum E huxleyi N acicularisdecipiens Parmales P line-ola and the discoid centric diatoms showed negative relative-abundance correlations with D indicating greatest relativeabundance early in the springndashsummer while C concavicor-niscurvatus and C dichaeta showed greater relative abun-dance later in the springndashsummer A negative correlation(minus063 p lt 0001) was detected between the longitude ofindividual sample collection (LONGE) and D indicatingthat samples collected later in the springndashsummer were morelikely to have been collected towards the west in the sampledregion (Table 2c Fig 5c)

                  Following cluster analysis similarity profile (SIMPROF)permutation analysis identified seven significantly differentgroups (p lt 005) with samples loosely grouped on the ba-

                  httpsdoiorg105194bg-17-3815-2020 Biogeosciences 17 3815ndash3835 2020

                  3826 B L Greaves et al SAM influences phytoplankton in SIZ

                  Figure 6 (a) CAP analysis of phytoplankton community composition Dots represent individual samples with colours corresponding tosignificant clusters (Fig 6b) The 22 phytoplankton taxagroups are overlain as weighted averages of their sample scores (red abbreviationsafter Fig 2) with positions plotted with a 3-times-larger distance from the origin to more easily visualise their relationships with constrainingenvironmental variables Linear projections of the significant constraining environmental covariates appear as blue arrows the length andangle of which represent the magnitude and direction of influence of each variable on community composition The inset shows the taxalocated close to the origin diatoms fri and cyc collocating (b) Cluster analysis dendrogram of the 52 samples based on similarities inphytoplankton community structure using colour to show seven significantly different groups (numbered 1ndash7 solid lines α = 005) Samplelabels contain season and voyage (eg 0809v2b= austral springndashsummer over 2008ndash2009 voyage designation 2 sample b is the secondsample obtained from the SIZ during that voyage) SAMautumn value SAMprior value and the D value

                  sis of their within-season successional maturity (D) and theSAM (Fig 6b) and demonstrated that there were signifi-cant differences between the community composition of thesamples The group structure determined by cluster analy-sis was displayed in the CAP ordination (using colour) todemonstrate that samples that clustered together were indeedclose to one another in the two-dimensional (2D) ordina-tion (Fig 6a) with their positioning further indicating theinfluences of D and the SAM on cluster groupings This lentconfidence that the 2D ordination was a reasonable approx-imation to the full high-dimensional structure As we knewthe values for the environmental covariates for each sam-ple it was possible to determine the correlation between the2D CAP solution and each environmental covariate We dis-played these correlations as a projected vector (arrow) wheredirection indicates the sign and length indicates strengthThis showed samples in clusters 3 and 4 (Fig 6b) were com-monly associated with a more positive SAM while those inclusters 5 6 and 7 were commonly associated with morenegative SAM values Samples in clusters 2 and 5 were com-

                  monly collected earlier in the springndashsummer period (lowerD) while those in clusters 1 4 6 and 7 were commonly col-lected later (Fig 6)

                  Other considered environmental covariates that did notsignificantly influence community composition were thetime of the day that a sample was collected and the mini-mum latitude reached by sea ice cover in the previous winter(Supplement Table S1)

                  These analyses were also undertaken using phytoplanktonabsolute abundances rather than with relative abundances asreported above The analysis of absolute abundance showedsimilar temporal peaks in variance explained (SupplementFig S4) although it explained less variance (SAMautumn ex-plaining 109 SAMspring 91 and SAMprior 92 ) (Ta-ble S3) Individual taxa correlations with SAM indices (Ta-ble S4) showed a similar pattern to those estimated using rel-ative abundances (Table 2b)

                  Biogeosciences 17 3815ndash3835 2020 httpsdoiorg105194bg-17-3815-2020

                  B L Greaves et al SAM influences phytoplankton in SIZ 3827

                  32 Influence of the SAM on phytoplanktonproductivity

                  Two indicators of the influence of the SAM on phytoplank-ton productivity were obtained (i) the influence of the SAMon satellite-derived total chlorophyll and (ii) the influence ofthe SAM on macronutrient concentrations indicating nutri-ent drawdown associated with productivity Using the timesand locations of the 52 samples over the 11 years of ourstudy satellite-derived total chlorophyll showed positive cor-relation with all SAM indices r = 050 (p lt 0001) withSAMautumn r = 072 (p lt 0001) with SAMprior and r =069 (p lt 0001) with SAMspring (Table 2c) Peaks in thecorrelation of total chlorophyll with the SAM were evidentin the preceding autumn and spring and prior to sampling inresponse surfaces for NASA satellite total chlorophyll alongwith a peak in early winter (Fig S1) While further data arerequired to confirm this correlation the results obtained inthis study supported the presence of a positive relationshipbetween productivity and the SAM

                  The observed concentrations of the macronutrients NOx PO4 and SiO4 showed significant negative correlationswith SAMautumn (r =minus039 minus056 minus042 respectively Ta-ble 2d p 0005 lt 0001 0002 respectively) The concen-trations of these nutrients showed stronger negative correla-tions with SAMautumn when the 50 of samples collectedlatest in the springndashsummer season was considered (r =minus058 minus074 minus051 Table 2e p 0002 lt 0001 0008respectively) Macronutrient concentrations were unrelatedto either SAMprior or SAMspring (Table 2d) Peaks in neg-ative correlation of the SAM on [PO4] were evident in thepreceding autumn and spring prior to sampling in responsesurfaces with the peaks being more negative when only the50 of samples collected later in the springndashsummer wereconsidered (Fig S2) The concentrations of macronutrientsalso showed expected decline through the springndashsummercorrelations between [NOx] [PO4] and [SiO4] withD wereminus077minus073 andminus056 respectively (Table 2d p lt 0001lt 0001 lt 0001 respectively)

                  33 Observed occurrence and abundance

                  Abundance of individual taxa groups averaged 133 cells permillilitre and ranged to a maximum of 8796 cells per mL (Ta-ble 3) Individual cell volume ranged from 8 microm3 for the Par-males spp to gt 60 000 microm3 for the diatoms Dactyliosolenantarcticus and Thalassiothrix antarctica Average relativeabundance ranged from 02 for the diatom Fragilariopsisritscheri to 17 for the combined taxa group Fragilariop-sis cylindruscurta Of the 22 taxa groups resolved in thisstudy four taxa groups were identified in all 52 samples and11 taxa groups were identified in more than 90 of samples(Table 3)

                  4 Discussion

                  41 The SAM and phytoplankton communitycomposition

                  Our results show that the SAM shows a relationship withthe community composition of phytoplankton in the sea-sonal ice zone (SIZ) of the Southern Ocean (SO) This con-clusion was supported by a combination of three analyses(i) Permutation-based analyses of cluster structure demon-strated that the 52 samples were separable into seven statisti-cally different groups on the basis of community abundancecomposition of the 22 taxa groups (Fig 6b) and thus thatthere was variation between samples that might be explain-able with known environmental variables if clustering hadrevealed few or no clusters it would have been indicative oflevels of community variance (either high or low) unlikelyto be systematically explainable with the environmental vari-ables (ii) CAP analysis identified the SAM as a significantexplanatory variable on the structure of the phytoplanktoncommunity (Table 1b) and showed that groups identified incluster analysis were generally distinguished by the SAMand the D that a sample was collected (Fig 6) (iii) 15 ofthe 22 taxa groups resolved showed significant pairwise cor-relations (p lt 005) between relative abundance and at leastone of the three derived SAM indices (Table 2b)

                  The derived SAM index with greatest influence on phy-toplankton community composition SAMautumn (Figs 3 4)explained 126 of the variance of phytoplankton commu-nity composition in the optimum multi-variable CAP model(Table 1b) SAMautumn represented the average SAM aroundthe time that sea ice was extending northward through theSIZ (Fig 1a) At this time phytoplankton productivity inthe SIZ would have declined to around 30 of its mid-summer maximum (Moore and Abbott 2000 Arrigo et al2008 Constable et al 2014) and phytoplankton would bepreparing for winter by variously producing energy stor-age products producing resting spores or cysts reducingmetabolic rate and engaging in heterotrophic consumptionfor energy (Fryxell 1989 McMinn and Martin 2013) Theformation of sea ice reduces available light by as much as999 (McMinn et al 1999) severely limiting light forphytoplankton for around half of each year at the rangeof longitude sampled latitude 64 S was covered in seaice for half the time across the sampled years (Fig 1a)Windier conditions associated with a more positive SAM inautumn may delay the consolidation of sea ice into largerfloes (Roach et al 2018) extending the phytoplankton grow-ing season and possibly increasing the relative abundanceof taxa that occur later in the springndashsummer season Thequantity of phytoplankton that survive the Antarctic winteris extremely low (McMinn and Martin 2013) and the abun-dance of taxa present and their metabolic condition whenthe autumn sea ice forms may strongly influence their vi-ability relative vigour and availability to seed the subse-

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                  3828 B L Greaves et al SAM influences phytoplankton in SIZ

                  quent post-winter bloom This possibility was supported bythe observation that the only two taxa groups observed tohave significantly (p lt 005) higher relative abundance laterin the springndashsummer the Chaetoceros species C dichaetaand C concavicorniscurvatus were both observed to alsoshow significantly higher relative abundances when the pre-ceding SAMautumn was more positive (Table 2b) Thus SAM-induced effects on phytoplankton in the autumn could wellinfluence the phytoplankton community structure in the fol-lowing post-winter productive season

                  Extending the springndashsummer productive season by de-laying the autumn consolidation of sea ice may result inmore prolonged declines in relative abundance of taxa thatare more prolific earlier in the springndashsummer and may thusreduce the population from which the following post-winterbloom is initiated Of the eight taxa groups showing sta-tistically higher relative abundance earlier in the springndashsummer (p lt 005) three showed corresponding statisticallylower relative abundances with higher preceding SAMautumn(Emiliana huxleyi Nitzschia acicularisdecipiens and Par-males spp p lt 005 Table 2b) supporting this conjec-ture Of the remaining five taxa groups of the eight fourshowed no detectable relationship with SAMautumn and one(Pseudonitzschia lineola) showed a positive relationship

                  Two other derived SAM indices were found to influencephytoplankton SAMspring and SAMprior These indices weredifficult to distinguish due to their largely overlapping timeperiods (Fig 4) and they were strongly correlated (r = 083p lt 005 Table 2c) with similar influence on taxonomicabundances (Table 2b) SAMprior was the preferred parame-ter for the multiparameter CAP model in which it explained43 of total variance Windier and stormier conditions as-sociated with a higher SAM in the months prior to sam-pling would increase nutrient input to the euphotic zone fromdeeper waters (Lovenduski and Gruber 2005) promotingproductivity whilst at the same time episodically dilutingsurface phytoplankton through deeper mixing More stormyconditions may also have brought about a faster break-upof winter sea ice promoting earlier spring phytoplanktongrowth Conversely windier conditions would also restrictstratification of the surface ocean precluding phytoplanktonbloom formation lessening productivity (Fitch and Moore2007) and reducing the abundance of early blooming taxaThis may explain the responses of Emiliania huxleyi and thecombined Nitzschia acicularisdecipiens group which bothshowed early maximum abundances (r =minus028 and minus047respectively with D p lt 005 Table 2b) and also nega-tive correlations with SAMspring and SAMprior (r =minus029to minus042 p lt 005 Table 2b) Five other taxa groups withearly maximum abundance (negative correlation with Dp lt 005) showed no detectable correlation with SAMspringand one (Pseudonitzschia lineola) showed a positive rela-tionship indicating that their abundances were determinedby environmental factors that prevail early in the season butnot those factors altered by variations in the SAM Histori-

                  cally the variance in the SAM is lower in the spring quar-ter than in other quarters (NOAA 2005) perhaps explainingwhy SAMspring and SAMprior explained less variance in com-munity composition than SAMautumn

                  We expected the SAM prior to sampling (SAMprior andSAMspring) would show a relationship with phytoplanktoncomposition and a lesser relationship of the SAM in thewinter is plausible because the surface of the ocean is in-sulated from atmospheric conditions by sea ice The relation-ship with the SAM the previous autumn was not expected butis also plausible as it coincides with the time when sea ice isforming and thus a critical time for phytoplankton preparingto hibernate the half-year of sea ice cover We also observeda similar relationship between SAMautumn and (i) NASAsatellite total chlorophyll and (ii) macronutrient concentra-tions across all samples as well as (iii) a stronger correla-tion with macronutrient concentrations when only the sam-ples collected in the latter half of the season were considered(Table 2c d and e respectively) We also observed maximain the autumn SAM relationship in response-surface analy-ses of the correlation between the SAM and (i) NASA satel-lite total chlorophyll and (ii) [PO4] in all samples as well as(iii) a stronger maxima with [PO4] when only the samplescollected later in the season were considered (Figs S1 andS2) Both total chlorophyll and [PO4] were observationallyindependent of the taxonomic cell counts and whilst [PO4]was estimated from parallel samples as the taxonomic analy-sis NASA satellite total chlorophyll had no material connec-tion with collected samples being linked only geographicallyand temporally and thus offers independent support for theunexpected observation that phytoplankton community com-position in the springndashsummer is related to the SAM in theprevious autumn The empirically defined SAMautumn alsoshowed significant (p lt 005) pairwise correlations with 12of the 22 taxa groups resolved (Table 2b)

                  42 Effect of the SAM on phytoplankton taxa

                  Nothing has been previously reported with respect to the cli-matic preferences of the majority of taxa identified in thisstudy and only 10 of the 22 taxa groups considered in ourresearch had data records in the Ocean Biogeographic In-formation System (OBIS 2020) Some of the observed taxahave been reported to show various relationships with en-vironmental factors including sea-surface temperature timethrough the season and latitude but often at the taxonomiclevel of genera rather than at a species level (Burckle et al1987 Chiba et al 2000 Waters et al 2000 Green and Sam-brotto 2006 Gomi et al 2007) We however observed dif-fering responses to environmental variables among closelyrelated taxa This was exemplified by the opposite correla-tions of Chaetoceros species C dicheata and C neglectuswith D (048 and minus070 respectively p lt 00025 Table 2b)and the opposite correlations of Fragilariopsis species Frhombica and F kerguelensis with SAMautumn (minus039 and

                  Biogeosciences 17 3815ndash3835 2020 httpsdoiorg105194bg-17-3815-2020

                  B L Greaves et al SAM influences phytoplankton in SIZ 3829

                  052 respectively p lt 005 Table 2b Fig 5a b) The strongand opposite response to these variables by species belong-ing to the same genus indicates the importance of species-level observation in detecting subtle changes in pelagic phy-toplankton communities

                  A third of analysed taxa comprising 7 taxa and 23 of all counted cells showed no detectable relationship withthe SAM This could be due to large errors associated withlow counts of rarer taxa because unaccounted variation wasmasking any relationship or because the taxa were insensi-tive to the SAM There is less chance of detecting relation-ships between taxa and environment variables when fewerindividuals are counted however some less represented taxadid show relationships with SAM indices (eg Emilianiahuxleyi |r|gt 038 Table 2b) Of the 22 taxa resolved 5showed no significant relationships with either the SAM orD All were comparatively scarce and together representedonly 2 of all cells counted Assessing species composi-tions across a greater fraction of each sample and thus count-ing more of the scarcer taxa may have revealed relationshipsbetween these rarer taxa and environmental variables (Nak-agawa and Cuthill 2007) Yet it remains possible that thesetaxa are actually unaffected by seasonal succession and theSAM instead responding to other environmental variablesthat were not measured as part of this study or that they re-main as persistent but relatively rare background taxa withrespect to the overall phytoplankton assemblage

                  This is the first study to show a link between variationin the SAM and the composition of phytoplankton commu-nities in the SO although similar findings have been re-ported for other major climatic phenomena in other partsof the globe The climatically similar Northern HemisphereAnnular Mode (NAM) causes increased westerly winds anddeeper mixed layers at middle to high northern latitudes inits positive phase (Nehring 1998 Thompson et al 2003Kahru et al 2011) The NAM has been related to the tim-ing abundance and biomass of phytoplankton taxa at highnorthern latitudes (Nehring 1998 Belgrano et al 1999 Ot-tersen et al 2001 Blenckner and Hillebrand 2002) andto the delayed occurrence of maximum chlorophyll in theNorth Atlantic Summer (Kahru et al 2011) Similarly theEl NintildeondashSouthern Oscillation (ENSO) equatorial mode hasbeen shown to influence the distribution and abundance ofphytoplankton in the tropical oceans (Blanchot et al 1992)

                  Phytoplankton are the pastures of the oceans and it is plau-sible that the climate in both autumn and spring influencethe phytoplankton community composition of phytoplank-ton and their ecological progression through the productivespringndashsummer period in the SIZ Climate change impactshave now been documented across every type of ecosystemon Earth (Scheffers et al 2016 Harris et al 2018) and thedistribution abundance phenology and productivity of phy-toplankton communities throughout the world are changingin response to warming acidifying and stratifying oceans(Hoegh-Guldberg and Bruno 2010) We have detected an

                  association between variation in phytoplankton communitycomposition and variation in the SAM over a relatively brief11-year monitoring period despite all the other environmen-tal factors that elicit variability in phytoplankton communi-ties in the SIZ of the SO

                  43 The effects of the SAM on productivity andbiomass

                  A positive SAM has previously been shown to be associ-ated with increased standing stocks and productivity of phy-toplankton in the SIZ of the SO (Arrigo et al 2008 Boyce etal 2010 Soppa et al 2016) In the SIZ above the AntarcticDivergence nutrients are replenished from the deeper oceanthrough the unproductive winter and the levels of nutritionremaining at the end of summer integrate the total draw-down of nutrients by phytoplankton production over the en-tire springndashsummer growing season (Arrigo et al 1999) Weobserved this nutrient drawdown through the springndashsummeras the negative correlation between all macronutrient con-centrations and D (Table 2d) We also observed a nega-tive relationship between all macronutrient concentrations inthe springndashsummer and the previous SAMautumn (Table 2dFig 5d) suggesting that an elevated SAM in autumn leadsto greater productivity and thus greater nutrient drawdownduring the following springndashsummer The nutrient concen-trations at the end of the springndashsummer productive seasonwould be expected to best represent the total productivityover the season we observed that the correlation between nu-trient concentrations and SAMautumn were higher when onlythe 50 of samples collected later in the springndashsummerwere considered (Table 2e) further supporting the conjec-ture that a higher SAM in the autumn is linked with greaterproductivity through the following springndashsummer

                  The observed positive relationship between total chloro-phyll and all the SAM indices (r = 05 to 072 p lt 00025Table 2c) and the presence of apparent spring and autumnmaxima in the response surfaces of the variance in totalchlorophyll explained by the SAM (Fig S1) further sup-port the conjecture that a more positive SAM is linked withgreater total chlorophyll and thus greater total productivityin the SIZ The total chlorophyll data considered were limitedto the 52 samples collected that is estimated for the timesand locations of each sample collection Estimates werecoarsely determined as interpolations of available monthlypredictions (Fig S3) and estimates could be thus obtainedfor only 49 of the 52 samples Yet there are indicators of re-liability in the sparse information the diatom Fragilariopsisrhombica is always relatively small (Table 3) and when therelative abundance of this taxon was high total chlorophyllwas lower (r =minus059 p lt 00025 Table 2b) and when therelative abundance of larger diatoms were high total chloro-phyll was also often high (eg Dactyliosolen antarcticusr = 037 p lt 005 Table 2b)

                  httpsdoiorg105194bg-17-3815-2020 Biogeosciences 17 3815ndash3835 2020

                  3830 B L Greaves et al SAM influences phytoplankton in SIZ

                  44 Implications

                  The SIZ is a productive region of the SO (Moore and Abbott2000) and changes to the SIZ phytoplankton communityhave potentially far-reaching implications for the ecosystemservices these organisms provide including carbon exportto the deep ocean and supporting the productivity of almostall Antarctic life Increases in the relative abundance of thelarger Chaetoceros spp diatoms would favour grazing bylarge metazooplankton especially krill (Boyd et al 1984Kawaguchi et al 1999 Moline et al 2004) which linkphytoplankton to whales seabirds seals and most higherAntarctic life forms (Smetacek 2008) Such changes wouldalso increase the efficiency of the biological pump as thelarger phytoplankton sink more rapidly than small phyto-plankton (Alldredge and Gotschalk 1989) and increasedgrazing by krill would reparcel some phytoplankton biomassinto faeces that would also sink more rapidly (Cadeacutee etal 1992) Such changes in carbon flux and trophodynam-ics would act as a negative feedback on climate change byspeeding the sequestration of carbon to the deep ocean

                  The SAM is predicted to become increasingly positivein the future (Arblaster and Meehl 2006 Swart and Fyfe2012 Gillett and Fyfe 2013 Abram et al 2014 Solomonet al 2016) Our results cannot necessarily be extrapolatedto infer changes that will likely occur as the SAM contin-ues to increase as evolutionary responses can partly miti-gate adverse effects on phytoplankton of longer-term climatechange and future changes in climate are likely to imposeother co-stressors on phytoplankton inhabiting these waters(Lohbeck et al 2014 Schluumlter et al 2014 Deppeler andDavidson 2017) Our study showed that some of the vari-ation in the phytoplankton composition in the seasonal icezone was significantly related to variation in the SAM andthat the sign and magnitude of the correlation with the SAMdiffered among species

                  5 Conclusions

                  Statistical analyses indicated that together the autumn andspring SAM explained a higher percentage (179 ) of thevariation in phytoplankton community composition than anyvariable mostly due to the autumn SAM (up to 133 ) Intotal this exceeded the variance explained by any other vari-able even that attributable to the time of the season thatthe sample was collected (154 ) or other critical phys-ical variables such as temperature salinity and latitudeFurthermore 15 of the 22 phytoplankton taxa identified inthis study showed significant correlation with the SAM andthere were indications that a more positive SAM was relatedto increased phytoplankton productivity in the SIZ Whilethis study was limited in both timespan (11 austral springndashsummers) and the overall variance in phytoplankton compo-sition explained by all the constraining variables (375 ) it

                  suggests that the phytoplankton of the SIZ are indeed sensi-tive to changes in the SAM and thus possibly responsive toclimate change

                  Data availability The dataset used in this paper is available athttpsdoiorg10261795d9181f7308bd (Greaves et al 2019)

                  Supplement The supplement related to this article is available on-line at httpsdoiorg105194bg-17-3815-2020-supplement

                  Author contributions Author contributions BLG contributed toconceptualisation data curation formal analysis investigationmethodology software and supervision validation visualisationwriting of the original draft writing and review and editing ATDcontributed to conceptualisation funding acquisition formal anal-ysis methodology project administration resources supervisionwriting and review and editing ADF contributed to formal analy-sis methodology resources writing and review and editing JPMcontributed to formal analysis methodology software writing andreview and editing AM contributed to project administration su-pervision writing and review and editing AMcM contributed tofunding acquisition project administration resources writing andreview and editing SWM contributed to conceptualisation fund-ing acquisition formal analysis writing and review and editing

                  Competing interests The authors declare that they have no conflictof interest

                  Acknowledgements Sampling on Astrolabe was supported bya FrenchndashAustralian research collaboration The Institut PolaireFranccedilais Paul-Eacutemile-Victor supported access to the ship and fieldoperations The biogeochemical data collection was coordinatedby Alain Poisson and Nicolas Metzl Sorbonne Universiteacute andBronte Tilbrook CSIRO Oceans and Atmosphere Steve Rintoul(CSIRO) and Rose Morrow (LEGOS) coordinated the collection ofsalinity and temperature data The Antarctic Climate and Ecosys-tems CRC and the Integrated Marine Observing System are thankedfor supporting the operation of sensors the collection of water sam-ples and nutrient analyses reported in this study Alan Poole MattSherlock John Akl Kate Berry Lesley Clementson Brian Grif-fiths (CSIRO) Rick van den Enden Rob Johnson (AAD) and themany dedicated volunteers and shipsrsquo officers and crew are thankedfor their important contributions to the field efforts and data man-agement We thank the University of Tasmania and the AustralianAntarctic Division for the space and resources needed to undertakethis work Thanks to Nathaniel Bindoff and Simon Wotherspoon fortheir consideration of parts of the paper Thanks are due to the re-viewer Damiano Righetti for the valuable input he provided in par-ticular for pointing out ambiguities and small errors and improvingthe clarity of the paper and an anonymous reviewer for the struc-tural and theoretical considerations Total chlorophyll data used inthis paper were produced with the Giovanni online data system de-veloped and maintained by the NASA GES DISC

                  Biogeosciences 17 3815ndash3835 2020 httpsdoiorg105194bg-17-3815-2020

                  B L Greaves et al SAM influences phytoplankton in SIZ 3831

                  Financial support This research has been supported by the Uni-versity of Tasmania (Institute of Marine and Antarctic Studies) bythe Australian Governmentrsquos Cooperative Research Centre programthrough the Antarctic Climate and Ecosystems CRC the AustralianAntarctic Division (projects 40 and 4107) and by the Australian Re-search Councilrsquos Special Research Initiative for Antarctic GatewayPartnership (project no SR140300001)

                  Review statement This paper was edited by Julia Uitz and re-viewed by Damiano Righetti and one anonymous referee

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                  Greaves B L Davidson A T and Fraser A D The SouthernAnnular Mode (SAM) influences phytoplankton communities inthe seasonal ice zone of the Southern Ocean Ver 1 Australian

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                  Ho M Kiem A S and Verdon-Kidd D C The Southern An-nular Mode a comparison of indices Hydrol Earth Syst Sci16 967ndash982 httpshttpsdoiorg105194hess-16-967-20122012

                  Hoegh-Guldberg O and Bruno J F The impact of climate changeon the worldrsquos marine ecosystems Science 328 1523ndash1528httpsdoiorg101126science1189930 2010

                  Hydes D J Aoyama M Aminot A Bakker K Becker S Cov-erly S Daniel A Dickson A G Grosso O Kerouel Rvan Ooijen J Sato K Tanhua T Woodward E M S andZhang J Z Determination of Dissolved Nutrients (N P SI)in Seawater With High Precision and Inter-Comparability Us-ing Gas-Segmented Continuous Flow Analysers in The GO-SHIP repeat hydrography manual a collection of expert re-ports and guidelines edited by Hood E M Sabine C Land Sloyan B M IOCCP report number 14 ICPO publicationseries number 134 UNESCO-IOC Paris France available athttpwwwgo-shiporgHydroManhtml (last access 15 January2020) 2010

                  Clem K R Crosta X de Lavergne C Eisenman I Eng-land M H Fogt R L Frankcombe L M MarshallG J Masson-Delmotte V Morrison A K Orsi A JRaphael M N Renwick J A Schneider D P Simp-kins G R Steig E J Stenni B Swingedouw D andVance T R Assessing recent trends in high-latitude SouthernHemisphere surface climate Nat Clim Change 6 917ndash926httpsdoiorg101038nclimate3103 2016

                  Kahru M Brotas V Manzano-Sarabia M and Mitchell B GAre phytoplankton blooms occurring earlier in the Arctic GlobChange Biol 17 1733ndash1739 httpsdoiorg101111j1365-2486201002312x 2011

                  Biogeosciences 17 3815ndash3835 2020 httpsdoiorg105194bg-17-3815-2020

                  B L Greaves et al SAM influences phytoplankton in SIZ 3833

                  Kawaguchi S Ichii T and Naganobu M Green krill the indi-cator of micro-and nano-size phytoplankton availability to krillPolar Biol 22 133ndash136 1999

                  Kohyama T and Hartmann D L Antarctic sea ice response toweather and climate modes of variability J Clime 29 721ndash741httpsdoiorg101175JCLI-D-15-03011 2016

                  Kwok R and Comiso J C Southern Ocean climate andsea ice anomalies associated with the Southern Oscilla-tion J Clim 15 487ndash501 httpsdoiorg1011751520-0442(2002)015lt0487SOCASIgt20CO2 2002

                  Lampitt R S and Antia A N Particle flux in deep seas Regionalcharacteristics and temporal variability Deep-Sea Res Pt I44 1377ndash1403 httpsdoiorg101016S0967-0637(97)00020-4 1997

                  Lannuzel D Schoemann V de Jong J Tison J L andChou L Distribution and biogeochemical behaviour of ironin the East Antarctic sea ice Mar Chem 106 18ndash32httpsdoiorg101016jmarchem200606010 2007

                  Lefebvre W Goosse H Timmermann R and FichefetT Influence of the Southern Annular Mode on the seaice-ocean system J Geophys Res-Ocean 109 1ndash12httpsdoiorg1010292004JC002403 2004

                  Legendre P and Anderson M J Distance-based re-dundancy analysis testing multispecies responsesin multifactorial ecological experiments EcolMonogr 69 1ndash24 httpsdoiorg1018900012-9615(1999)069[0001DBRATM]20CO2 1999

                  Legendre P Oksanen J and ter Braak C J Testing thesignificance of canonical axes in redundancy analysis Meth-ods Ecol Evol 2 269ndash277 httpsdoiorg101111j2041-210X201000078x 2011

                  Lenton A and Matear R J Role of the Southern Annular Mode(SAM) in Southern Ocean CO2 uptake Global Biogeochem Cy21 1-17 httpsdoiorg1010292006GB002714 2007

                  Lohbeck K T Riebesell U and Reusch T B H Gene expres-sion changes in the coccolithophore Emiliania huxleyi after 500generations of selection to ocean acidification P Roy Soc B281 1ndash7 httpsdoiorg101098rspb20140003 2014

                  Lovenduski N S Gruber N Doney S C and Lima I D En-hanced CO2 outgassing in the Southern Ocean from a positivephase of the Southern Annular Mode Global Biogeochem Cy21 1ndash14 httpsdoiorg1010292006GB002900 2007

                  Lovenduski N S and Gruber N Impact of the Southern AnnularMode on Southern Ocean circulation and biology Geophys ResLett 32 1ndash4 httpsdoiorg1010292005GL022727 2005

                  Mackas D L Does blending of chlorophylldata bias temporal trend Nature 472 E4ndashE5httpsdoiorg101038nature09951 2011

                  Mackintosh A N Anderson B M Lorrey A M Renwick JA Frei P and Dean S M Regional cooling caused recentNew Zealand glacier advances in a period of global warmingNat Commun 8 1ndash13 httpsdoiorg101038ncomms142022017

                  Marshall G J Trends in the Southern Annu-lar Mode from Observations and Reanalyses JClim 16 4134ndash4143 httpsdoiorg1011751520-0442(2003)016lt4134TITSAMgt20CO2 2003

                  Marshall G J Half-century seasonal relationships between theSouthern Annular mode and Antarctic temperatures Int J Cli-matol 27 373ndash383 httpsdoiorg101002joc1407 2007

                  Martin A McMinn A Heath M Hegseth E N and Ryan KG The physiological response to increased temperature in over-wintering sea ice algae and phytoplankton in McMurdo SoundAntarctica and Tromsoslash Sound Norway J Exp Mar Biol Ecol428 57ndash66 httpsdoiorg101016jjembe201206006 2012

                  Massom R A and Stammerjohn S E Antarctic sea ice changeand variability ndash Physical and ecological implications Polar Sci4 149ndash186 httpsdoiorg101016jpolar201005001 2010

                  McMinn A Ashworth C and Ryan K Growth and Productivityof Antarctic Sea Ice Algae under PAR and UV Irradiances BotMar 42 401ndash407 httpsdoiorg101515BOT1999046 1999

                  McMinn A and Martin A Dark survival in awarming world P Roy Soc B 280 20122909httpsdoiorg101098rspb20122909 2013

                  Meredith M P Murphy E J Hawker E J King JC and Wallace M I On the interannual variability ofocean temperatures around South Georgia Southern OceanForcing by El NintildeoSouthern Oscillation and the South-ern Annular Mode Deep-Sea Res Pt II 55 2007ndash2022httpsdoiorg101016jdsr2200805020 2008

                  Mo K C Relationships between low-frequency variability inthe Southern Hemisphere and sea surface temperature anoma-lies J Clim 13 3599ndash3610 httpsdoiorg1011751520-0442(2000)013lt3599rblfvigt20co2 2000

                  Moline M A Claustre H Frazer T K Schofield O andVernet M Alteration of the food web along the Antarc-tic Peninsula in response to a regional warming trend GlobChange Biol 10 1973ndash1980 httpsdoiorg101111j1365-2486200400825x 2004

                  Moore J K and Abbott M R Phytoplankton chloro-phyll distributions and primary production in the South-ern Ocean J Geophys Res-Ocean 105 28709ndash28722httpsdoiorg1010291999JC000043 2000

                  Nakagawa S A farewell to Bonferroni the problems of low sta-tistical power and publication bias Behav Ecol 15 1044ndash1045httpsdoiorg101093behecoarh107 2004

                  Nakagawa S and Cuthill I C Effect size confidence inter-val and statistical significance a practical guide for biolo-gists Biol Rev 82 591ndash605 httpsdoiorg101111j1469-185X200700027x 2007

                  Nehring S Establishment of thermophilic phytoplankton speciesin the North Sea biological indicators of climatic changesShort communication ICES J Mar Sci 55 818ndash823httpsdoiorg101006jmsc19980389 1998

                  NOAA Teleconnection Pattern Calculation ProceduresClimate Prediction Center Internet Team available athttpswwwcpcncepnoaagovproductsprecipCWlinkdaily_ao_indexhistorymethodshtmlvar (last access 15 June 2017)2005

                  NOAA NCEP-DOE Reanalysis 2 data provided by theNOAAOARESRL PSD Boulder Colorado USA available athttpswwwcpcncepnoaagovproductsprecipCWlinkENSOverfnewaaoshtml last access 25 June 2017

                  OBIS Ocean Biogeographic Information System Intergovernmen-tal Oceanographic Commission of UNESCO available at httpwwwiobisorg last access 18 February 2020

                  httpsdoiorg105194bg-17-3815-2020 Biogeosciences 17 3815ndash3835 2020

                  3834 B L Greaves et al SAM influences phytoplankton in SIZ

                  Ottersen G Planque B Belgrano A Post E ReidP C and Stenseth N C Ecological effects of theNorth Atlantic Oscillation Oecologia 128 1ndash14httpsdoiorg101007s004420100655 2001

                  Parkinson C L A 40-y record reveals gradual Antarctic sea iceincreases followed by decreases at rates far exceeding the ratesseen in the Arctic P Natl Acad Sci USA 116 14414ndash14423httpsdoiorg101073pnas1906556116 2019

                  R Core Team R A Language and Environment for Statistical Com-puting R Foundation for Statistical Computing Vienna Austria2016

                  Rigual-Hernaacutendez A S Trull T W Bray S G Closset Iand Armand L K Seasonal dynamics in diatom and par-ticulate export fluxes to the deep sea in the Australian sec-tor of the southern Antarctic Zone J Mar Syst 142 62ndash74httpsdoiorg101016jjmarsys201410002 2015

                  Roach L A Smith M M and Dean S M Quantify-ing growth of pancake sea ice floes using images fromdrifting buoys J Geophys Res-Ocean 123 2851ndash2866httpsdoiorg1010022017JC013693 2018

                  Rodgers J L and Nicewander W A Thirteen Ways toLook at the Correlation Coefficient Am Stat 42 59ndash66httpsdoiorg10108000031305198810475524 1988

                  Saenz B T and Arrigo K R Annual primary produc-tion in Antarctic sea ice during 2005-2006 from a sea icestate estimate J Geophys Res-Ocean 119 3645ndash3678httpsdoiorg1010022013JC009677 2014

                  Sarthou G Timmermans K R Blain S and Treacuteguer P Growthphysiology and fate of diatoms in the ocean a review J Sea Res53 25ndash42 httpsdoiorg101016jseares200401007 2005

                  Savidge G Priddle J Gilpin L C Bathmann U Murphy EJ Owens N J P Pollard R T Turner D R Veth C andBoyd P An assessment of the role of the marginal ice zone inthe carbon cycle of the Southern Ocean Antarct Sci 8 349ndash358 httpsdoiorg101017S0954102096000521 1996

                  Scheffers B R De Meester L Bridge T C L HoffmannA A Pandolfi J M Corlett R T Butchart S H MPearce-Kelly P Kovacs K M Dudgeon D Pacifici MRondinini C Foden W B Martin T G Mora C Bick-ford D and Watson J E M The broad footprint of climatechange from genes to biomes to people Science 354 aaf7671httpsdoiorg101126scienceaaf7671 2016

                  Schiermeier Q Atmospheric science fixing the sky Nature 460792ndash795 httpsdoiorg101038460792a 2009

                  Schluumlter L Lohbeck K T Gutowska M A Groumlger J P Riebe-sell U and Reusch T B H Adaptation of a globally importantcoccolithophore to ocean warming and acidification Nat ClimChange 4 1024ndash1030 httpsdoiorg101038nclimate23792014

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                  Sen Gupta A and England M H Coupled oceanndashatmospherendashiceresponse to variations in the Southern Annular Mode J Clim19 4457ndash4486 httpsdoiorg101175JCLI38431 2006

                  Smetacek V and Nicol S Polar ocean ecosys-tems in a changing world Nature 437 362ndash368httpsdoiorg101038nature04161 2005

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                  Solomon S Ivy D J Kinnison D Mills M J Neely R R andSchmidt A Emergence of healing in the Antarctic ozone layerScience 353 269ndash274 httpsdoiorg101126scienceaae00612016

                  Son S W Tandon N F Polvani L M and Waugh D W Ozonehole and Southern Hemisphere climate change Geophys ResLett 36 1ndash5 httpsdoiorg1010292009GL038671 2009

                  Soppa M Voumllker C and Bracher A Diatom Phenol-ogy in the Southern Ocean Mean Patterns Trends andthe Role of Climate Oscillations Remote Sens 8 1ndash7httpsdoiorg103390rs8050420 2016

                  Spreen G Kaleschke L and Heygster G Sea ice remote sensingusing AMSR-E 89-GHz channels J Geophys Res-Ocean 113C02S03 httpsdoiorg1010292005JC003384 2008

                  Squire V A Ocean wave interactions with sea icea reappraisal Annu Rev Fluid Mech 52 37ndash60httpsdoiorg101146annurev-fluid-010719-060301 2020

                  Steinacher M Joos F Froumllicher T L Bopp L Cadule PCocco V Doney S C Gehlen M Lindsay K Moore J KSchneider B and Segschneider J Projected 21st century de-crease in marine productivity a multi-model analysis Biogeo-sciences 7 979ndash1005 httpsdoiorg105194bg-7-979-20102010

                  Swart N C and Fyfe J C Observed and simulated changes inthe Southern Hemisphere surface westerly wind-stress GeophysRes Lett 39 1ndash6 httpsdoiorg1010292012GL0528102012

                  Swart N C Fyfe J C Gillett N and Marshall G J Compar-ing Trends in the Southern Annular Mode and Surface WesterlyJet J Clim 28 8840ndash8859 httpsdoiorg101175JCLI-D-15-03341 2015

                  Swiło M Majewski W Minzoni R T and Ander-son J B Diatom assemblages from coastal settingsof West Antarctica Mar Micropaleontol 125 95ndash109httpsdoiorg101016jmarmicro201604001 2016

                  Takahashi T Sutherland S C Wanninkhof R Sweeney CFeely R A Chipman D W Hales B Friederich G ChavezF Sabine C Watson A Bakker D C E Schuster U MetzlN Yoshikawa-Inoue H Ishii M Midorikawa T Nojiri YKoumlrtzinger A Steinhoff T Hoppema M Olafsson J Arnar-son T S Tilbrook B Johannessen T Olsen A Bellerby RWong C S Delille B Bates N R and de Baar H J W Cli-matological mean and decadal change in surface ocean pCO2and net seandashair CO2 flux over the global oceans Deep-Sea ResPt II 56 554ndash577 httpsdoiorg101016jdsr22008120092009

                  Taljaard J J Development Distribution and Move-ment of Cyclones and Anticyclones in the South-ern Hemisphere During the IGY J Appl Me-teorol 6 973ndash987 httpsdoiorg1011751520-0450(1967)006lt0973DDAMOCgt20CO2 1967

                  Taylor F and Sjunneskog C Postglacial marine diatom recordof the Palmer Deep Antarctic Peninsula (ODP Leg 178 Site1098) 2 Diatom assemblages Paleoceanography 17 1ndash12httpsdoiorg1010292000PA000564 2002

                  Biogeosciences 17 3815ndash3835 2020 httpsdoiorg105194bg-17-3815-2020

                  B L Greaves et al SAM influences phytoplankton in SIZ 3835

                  Ter Braak C J and Verdonschot P F Canonical correspondenceanalysis and related multivariate methods in aquatic ecologyAquat Sci 57 255ndash289 httpsdoiorg101007BF008774301995

                  Thompson D W Lee S and Baldwin M P Atmospheric pro-cesses governing the northern hemisphere annular modeNorthAtlantic oscillation Geoph Monog Series 134 81ndash112 2003

                  Thompson D W Solomon S Kushner P J England M HGrise K M and Karoly D J Signatures of the Antarcticozone hole in Southern Hemisphere surface climate change NatGeosci 4 741ndash749 2011

                  Thompson D W J and Solomon S Interpretation of RecentSouthern Hemisphere Climate Change Science 296 895ndash899httpsdoiorg101126science1069270 2002

                  Tomas C R (Ed) Identifying marine phytoplankton Academicpress San Diego California 858 pp 1997

                  Turner J Bracegirdle T J Phillips T Marshall G J and Hosk-ing J S An initial assessment of Antarctic sea ice extent in theCMIP5 models J Clim 26 1473ndash1484 2013

                  Turner J Summerhayes C Sparrow M Mayewski P ConveyP di Prisco G Gutt J Hodgson D Speich S Worby TBo S and Klepikov A Antarctic climate change and the envi-ronment ndash 2015 update Antarctic Treaty Consultative MeetingSofia Bulgaria June 2015 IP 92 2015

                  Waters R L Van Den Enden R and Marchant H J Summer mi-crobial ecology off East Antarctica (80ndash150 E) protistan com-munity structure and bacterial abundance Deep-Sea Res Pt II47 2401ndash2435 httpsdoiorg101016S0967-0645(00)00030-8 2000

                  Webb T and Bryson R A Late-and postglacial climatic changein the northern Midwest USA quantitative estimates derivedfrom fossil pollen spectra by multivariate statistical analy-sis Quaternary Res 2 70ndash115 httpsdoiorg1010160033-5894(72)90005-1 1972

                  Whitaker D and Christman M clustsig Significant Cluster Anal-ysis R package version 11 2014

                  Wilson D L Smith Jr W O and Nelson D M Phytoplanktonbloom dynamics of the western Ross Sea ice edge ndash I Primaryproductivity and species-specific production Deep-Sea Res PtI 33 1375ndash1387 httpsdoiorg1010160198-0149(86)90041-5 1986

                  Wright S W van den Enden R L Pearce I David-son A T Scott F J and Westwood K J Phyto-plankton community structure and stocks in the SouthernOcean (30ndash80 E) determined by CHEMTAX analysis ofHPLC pigment signatures Deep-Sea Res Pt II 57 758ndash778httpsdoiorg101016jdsr2200906015 2010

                  httpsdoiorg105194bg-17-3815-2020 Biogeosciences 17 3815ndash3835 2020

                  • Abstract
                  • Introduction
                    • Importance of the SIZ phytoplankton bloom
                    • The Southern Annular Mode
                    • The hypothesis
                      • Methods
                        • Phytoplankton relative abundance
                        • Environmental covariates
                        • Statistical analysis
                          • Results
                            • The influence of the SAM on phytoplankton community composition
                            • Influence of the SAM on phytoplankton productivity
                            • Observed occurrence and abundance
                              • Discussion
                                • The SAM and phytoplankton community composition
                                • Effect of the SAM on phytoplankton taxa
                                • The effects of the SAM on productivity and biomass
                                • Implications
                                  • Conclusions
                                  • Data availability
                                  • Supplement
                                  • Author contributions
                                  • Competing interests
                                  • Acknowledgements
                                  • Financial support
                                  • Review statement
                                  • References

                    3824 B L Greaves et al SAM influences phytoplankton in SIZ

                    Table3Identifiedtaxa

                    groupstaxataxacodecellscountedcellsm

                    easuredaverageindividualcellvolum

                    eabundance(averagem

                    inimum

                    andm

                    aximum

                    )averagerelative

                    abundanceaverage

                    totalvolumeaverage

                    relativevolum

                    eandpercentage

                    ofsamples

                    inw

                    hicheach

                    taxagroup

                    was

                    identified

                    TaxonTaxa

                    codeC

                    ellsC

                    ellsA

                    verageA

                    bundanceR

                    elativeA

                    verageA

                    veragevolum

                    eSam

                    plescounted

                    measured

                    individualabundance

                    totalfraction

                    ofw

                    ithtaxon

                    cellvolume

                    averagevolum

                    etotalcellvolum

                    e

                    Average

                    Min

                    Max

                    Num

                    berN

                    umber

                    microm3

                    cellsmLminus

                    1cellsm

                    Lminus

                    1cellsm

                    Lminus

                    1microm

                    3m

                    Lminus

                    1

                    Chaetoceros

                    atlanticusca

                    356479

                    131651

                    0364

                    22

                    81382

                    14

                    90

                    Chaetoceros

                    castracaneicca

                    4834

                    9406

                    038

                    03

                    18616

                    04

                    48

                    Chaetoceros

                    concavicorniscurvatuscc

                    120200

                    344320

                    0135

                    07

                    78443

                    14

                    77

                    Chaetoceros

                    dichaetacd

                    25631943

                    491423

                    02503

                    13

                    145999

                    29

                    94

                    Chaetoceros

                    neglectuscn

                    634488

                    17683

                    0697

                    35

                    11906

                    02

                    81

                    Cylindrotheca

                    closteriumcyc

                    12250

                    12117

                    079

                    07

                    410601

                    77

                    D

                    actyliosolenantarcticus

                    da277

                    472(61

                    899)44

                    0195

                    16

                    1860

                    68027

                    98

                    D

                    actyliosolentenuijunctus

                    dt1981

                    13503828

                    2967

                    131599

                    895

                    36716

                    100

                    D

                    ictyochaspeculum

                    (silicoflagellate)ds

                    8184

                    492010

                    069

                    05

                    99301

                    15

                    48

                    discoidcentric

                    diatoms

                    dcx965

                    12808572

                    13312

                    69652

                    437

                    55673

                    100

                    E

                    miliania

                    huxleyi(haptophyte)ehu

                    17370

                    6524

                    0192

                    08

                    355201

                    58

                    Fragilariopsis

                    cylindruscurtafcx

                    39873013

                    70632

                    08796

                    17

                    44167

                    09

                    98

                    Fragilariopsiskerguelensis

                    fk1031

                    40553748

                    1670

                    105458

                    369

                    49265

                    98

                    Fragilariopsis

                    pseudonanafps

                    170115

                    35526

                    0201

                    09

                    1899904

                    69

                    Fragilariopsis

                    rhombica

                    fr4542

                    346936

                    65829

                    207022

                    23359

                    06

                    100

                    Fragilariopsisritscheri

                    fri46

                    19572

                    70

                    8602

                    11

                    02002

                    35

                    G

                    uinardiacylindrus

                    guc110

                    8110

                    40515

                    079

                    06

                    225921

                    41

                    67

                    Nitzschia

                    acicularisdecipiensnix

                    1133509

                    251162

                    0977

                    57

                    46705

                    10

                    98

                    Parmales

                    spp(chrysophyte)parm

                    3222

                    838

                    0668

                    17

                    33400

                    27

                    Petasaria

                    heterolepis(other)

                    pet45

                    ndash(65)

                    70

                    18703

                    2667

                    01

                    6

                    Pseudonitzschia

                    lineolapsl

                    681403

                    109391

                    4376

                    41

                    8446015

                    100

                    Thalassiothrix

                    antarcticata

                    112269

                    (63000)

                    130

                    17206

                    314

                    42448

                    85

                    Biogeosciences 17 3815ndash3835 2020 httpsdoiorg105194bg-17-3815-2020

                    B L Greaves et al SAM influences phytoplankton in SIZ 3825

                    Figure 5 Scatter-plots (a b) examples of phytoplankton taxon relative abundance versus SAMautumn (c) LONGE of sample collectionversus D and (d) [PO4] versus SAMautumn Each figure shows r2 and p associated with the relationship A line of least-squares best fit isprovided to give an indication of trend

                    groups When applying the conservative Bonferroni-adjustedα = 00025 seven taxa groups showed significant correlation(p lt 00025) with any SAM index and four with SAMautumn

                    SAMprior and SAMspring represented a similar time span inthe spring immediately prior to sampling (Fig 4) and werestrongly and significantly correlated (r = 083 Table 2cp lt 0001) Samples were collected over a calendar rangeof 140 d (20 Octoberndash28 February Table 2a) and thus the97 d period represented by SAMprior varied in its positionin the calendar across the 140 d spread of the 52 samples(Fig 4) SAMprior and SAMspring also showed similar corre-lation signs with taxa group relative abundances (Table 2b)It was not possible however to determine whether the pre-season SAM influence was a spring effect or a prior-to-sampling effect and whilst both appear to be important ex-planatory terms only SAMprior was retained in the optimumCAP model (Table 1b)

                    In the optimum multi-covariate CAP model D explainedthe greatest proportion of the observed variance in phyto-plankton community composition (Table 1b) D was signif-icantly correlated (p lt 00025) with SST S and DSSI andthe variable singly captured the most variation in phytoplank-ton community composition associated with seasonal suc-cession Alone it explained 154 of the total variance (Ta-

                    ble 1b) with its effect on the phytoplankton community be-ing approximately orthogonal to that of the SAM (Fig 6a) Aweak positive relationship detected between SAMautumn andD indicated a weak trend of sampling later in the springndashsummer period in years with a higher autumn SAM (r =032 Table 2c p = 002) but otherwise the SAM indicesand D were un-related

                    A total of 10 taxa groups showed significant correlation(p lt 005) between their relative abundance and D (Ta-ble 2b) Chaetoceros castracanei C neglectus D specu-lum E huxleyi N acicularisdecipiens Parmales P line-ola and the discoid centric diatoms showed negative relative-abundance correlations with D indicating greatest relativeabundance early in the springndashsummer while C concavicor-niscurvatus and C dichaeta showed greater relative abun-dance later in the springndashsummer A negative correlation(minus063 p lt 0001) was detected between the longitude ofindividual sample collection (LONGE) and D indicatingthat samples collected later in the springndashsummer were morelikely to have been collected towards the west in the sampledregion (Table 2c Fig 5c)

                    Following cluster analysis similarity profile (SIMPROF)permutation analysis identified seven significantly differentgroups (p lt 005) with samples loosely grouped on the ba-

                    httpsdoiorg105194bg-17-3815-2020 Biogeosciences 17 3815ndash3835 2020

                    3826 B L Greaves et al SAM influences phytoplankton in SIZ

                    Figure 6 (a) CAP analysis of phytoplankton community composition Dots represent individual samples with colours corresponding tosignificant clusters (Fig 6b) The 22 phytoplankton taxagroups are overlain as weighted averages of their sample scores (red abbreviationsafter Fig 2) with positions plotted with a 3-times-larger distance from the origin to more easily visualise their relationships with constrainingenvironmental variables Linear projections of the significant constraining environmental covariates appear as blue arrows the length andangle of which represent the magnitude and direction of influence of each variable on community composition The inset shows the taxalocated close to the origin diatoms fri and cyc collocating (b) Cluster analysis dendrogram of the 52 samples based on similarities inphytoplankton community structure using colour to show seven significantly different groups (numbered 1ndash7 solid lines α = 005) Samplelabels contain season and voyage (eg 0809v2b= austral springndashsummer over 2008ndash2009 voyage designation 2 sample b is the secondsample obtained from the SIZ during that voyage) SAMautumn value SAMprior value and the D value

                    sis of their within-season successional maturity (D) and theSAM (Fig 6b) and demonstrated that there were signifi-cant differences between the community composition of thesamples The group structure determined by cluster analy-sis was displayed in the CAP ordination (using colour) todemonstrate that samples that clustered together were indeedclose to one another in the two-dimensional (2D) ordina-tion (Fig 6a) with their positioning further indicating theinfluences of D and the SAM on cluster groupings This lentconfidence that the 2D ordination was a reasonable approx-imation to the full high-dimensional structure As we knewthe values for the environmental covariates for each sam-ple it was possible to determine the correlation between the2D CAP solution and each environmental covariate We dis-played these correlations as a projected vector (arrow) wheredirection indicates the sign and length indicates strengthThis showed samples in clusters 3 and 4 (Fig 6b) were com-monly associated with a more positive SAM while those inclusters 5 6 and 7 were commonly associated with morenegative SAM values Samples in clusters 2 and 5 were com-

                    monly collected earlier in the springndashsummer period (lowerD) while those in clusters 1 4 6 and 7 were commonly col-lected later (Fig 6)

                    Other considered environmental covariates that did notsignificantly influence community composition were thetime of the day that a sample was collected and the mini-mum latitude reached by sea ice cover in the previous winter(Supplement Table S1)

                    These analyses were also undertaken using phytoplanktonabsolute abundances rather than with relative abundances asreported above The analysis of absolute abundance showedsimilar temporal peaks in variance explained (SupplementFig S4) although it explained less variance (SAMautumn ex-plaining 109 SAMspring 91 and SAMprior 92 ) (Ta-ble S3) Individual taxa correlations with SAM indices (Ta-ble S4) showed a similar pattern to those estimated using rel-ative abundances (Table 2b)

                    Biogeosciences 17 3815ndash3835 2020 httpsdoiorg105194bg-17-3815-2020

                    B L Greaves et al SAM influences phytoplankton in SIZ 3827

                    32 Influence of the SAM on phytoplanktonproductivity

                    Two indicators of the influence of the SAM on phytoplank-ton productivity were obtained (i) the influence of the SAMon satellite-derived total chlorophyll and (ii) the influence ofthe SAM on macronutrient concentrations indicating nutri-ent drawdown associated with productivity Using the timesand locations of the 52 samples over the 11 years of ourstudy satellite-derived total chlorophyll showed positive cor-relation with all SAM indices r = 050 (p lt 0001) withSAMautumn r = 072 (p lt 0001) with SAMprior and r =069 (p lt 0001) with SAMspring (Table 2c) Peaks in thecorrelation of total chlorophyll with the SAM were evidentin the preceding autumn and spring and prior to sampling inresponse surfaces for NASA satellite total chlorophyll alongwith a peak in early winter (Fig S1) While further data arerequired to confirm this correlation the results obtained inthis study supported the presence of a positive relationshipbetween productivity and the SAM

                    The observed concentrations of the macronutrients NOx PO4 and SiO4 showed significant negative correlationswith SAMautumn (r =minus039 minus056 minus042 respectively Ta-ble 2d p 0005 lt 0001 0002 respectively) The concen-trations of these nutrients showed stronger negative correla-tions with SAMautumn when the 50 of samples collectedlatest in the springndashsummer season was considered (r =minus058 minus074 minus051 Table 2e p 0002 lt 0001 0008respectively) Macronutrient concentrations were unrelatedto either SAMprior or SAMspring (Table 2d) Peaks in neg-ative correlation of the SAM on [PO4] were evident in thepreceding autumn and spring prior to sampling in responsesurfaces with the peaks being more negative when only the50 of samples collected later in the springndashsummer wereconsidered (Fig S2) The concentrations of macronutrientsalso showed expected decline through the springndashsummercorrelations between [NOx] [PO4] and [SiO4] withD wereminus077minus073 andminus056 respectively (Table 2d p lt 0001lt 0001 lt 0001 respectively)

                    33 Observed occurrence and abundance

                    Abundance of individual taxa groups averaged 133 cells permillilitre and ranged to a maximum of 8796 cells per mL (Ta-ble 3) Individual cell volume ranged from 8 microm3 for the Par-males spp to gt 60 000 microm3 for the diatoms Dactyliosolenantarcticus and Thalassiothrix antarctica Average relativeabundance ranged from 02 for the diatom Fragilariopsisritscheri to 17 for the combined taxa group Fragilariop-sis cylindruscurta Of the 22 taxa groups resolved in thisstudy four taxa groups were identified in all 52 samples and11 taxa groups were identified in more than 90 of samples(Table 3)

                    4 Discussion

                    41 The SAM and phytoplankton communitycomposition

                    Our results show that the SAM shows a relationship withthe community composition of phytoplankton in the sea-sonal ice zone (SIZ) of the Southern Ocean (SO) This con-clusion was supported by a combination of three analyses(i) Permutation-based analyses of cluster structure demon-strated that the 52 samples were separable into seven statisti-cally different groups on the basis of community abundancecomposition of the 22 taxa groups (Fig 6b) and thus thatthere was variation between samples that might be explain-able with known environmental variables if clustering hadrevealed few or no clusters it would have been indicative oflevels of community variance (either high or low) unlikelyto be systematically explainable with the environmental vari-ables (ii) CAP analysis identified the SAM as a significantexplanatory variable on the structure of the phytoplanktoncommunity (Table 1b) and showed that groups identified incluster analysis were generally distinguished by the SAMand the D that a sample was collected (Fig 6) (iii) 15 ofthe 22 taxa groups resolved showed significant pairwise cor-relations (p lt 005) between relative abundance and at leastone of the three derived SAM indices (Table 2b)

                    The derived SAM index with greatest influence on phy-toplankton community composition SAMautumn (Figs 3 4)explained 126 of the variance of phytoplankton commu-nity composition in the optimum multi-variable CAP model(Table 1b) SAMautumn represented the average SAM aroundthe time that sea ice was extending northward through theSIZ (Fig 1a) At this time phytoplankton productivity inthe SIZ would have declined to around 30 of its mid-summer maximum (Moore and Abbott 2000 Arrigo et al2008 Constable et al 2014) and phytoplankton would bepreparing for winter by variously producing energy stor-age products producing resting spores or cysts reducingmetabolic rate and engaging in heterotrophic consumptionfor energy (Fryxell 1989 McMinn and Martin 2013) Theformation of sea ice reduces available light by as much as999 (McMinn et al 1999) severely limiting light forphytoplankton for around half of each year at the rangeof longitude sampled latitude 64 S was covered in seaice for half the time across the sampled years (Fig 1a)Windier conditions associated with a more positive SAM inautumn may delay the consolidation of sea ice into largerfloes (Roach et al 2018) extending the phytoplankton grow-ing season and possibly increasing the relative abundanceof taxa that occur later in the springndashsummer season Thequantity of phytoplankton that survive the Antarctic winteris extremely low (McMinn and Martin 2013) and the abun-dance of taxa present and their metabolic condition whenthe autumn sea ice forms may strongly influence their vi-ability relative vigour and availability to seed the subse-

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                    3828 B L Greaves et al SAM influences phytoplankton in SIZ

                    quent post-winter bloom This possibility was supported bythe observation that the only two taxa groups observed tohave significantly (p lt 005) higher relative abundance laterin the springndashsummer the Chaetoceros species C dichaetaand C concavicorniscurvatus were both observed to alsoshow significantly higher relative abundances when the pre-ceding SAMautumn was more positive (Table 2b) Thus SAM-induced effects on phytoplankton in the autumn could wellinfluence the phytoplankton community structure in the fol-lowing post-winter productive season

                    Extending the springndashsummer productive season by de-laying the autumn consolidation of sea ice may result inmore prolonged declines in relative abundance of taxa thatare more prolific earlier in the springndashsummer and may thusreduce the population from which the following post-winterbloom is initiated Of the eight taxa groups showing sta-tistically higher relative abundance earlier in the springndashsummer (p lt 005) three showed corresponding statisticallylower relative abundances with higher preceding SAMautumn(Emiliana huxleyi Nitzschia acicularisdecipiens and Par-males spp p lt 005 Table 2b) supporting this conjec-ture Of the remaining five taxa groups of the eight fourshowed no detectable relationship with SAMautumn and one(Pseudonitzschia lineola) showed a positive relationship

                    Two other derived SAM indices were found to influencephytoplankton SAMspring and SAMprior These indices weredifficult to distinguish due to their largely overlapping timeperiods (Fig 4) and they were strongly correlated (r = 083p lt 005 Table 2c) with similar influence on taxonomicabundances (Table 2b) SAMprior was the preferred parame-ter for the multiparameter CAP model in which it explained43 of total variance Windier and stormier conditions as-sociated with a higher SAM in the months prior to sam-pling would increase nutrient input to the euphotic zone fromdeeper waters (Lovenduski and Gruber 2005) promotingproductivity whilst at the same time episodically dilutingsurface phytoplankton through deeper mixing More stormyconditions may also have brought about a faster break-upof winter sea ice promoting earlier spring phytoplanktongrowth Conversely windier conditions would also restrictstratification of the surface ocean precluding phytoplanktonbloom formation lessening productivity (Fitch and Moore2007) and reducing the abundance of early blooming taxaThis may explain the responses of Emiliania huxleyi and thecombined Nitzschia acicularisdecipiens group which bothshowed early maximum abundances (r =minus028 and minus047respectively with D p lt 005 Table 2b) and also nega-tive correlations with SAMspring and SAMprior (r =minus029to minus042 p lt 005 Table 2b) Five other taxa groups withearly maximum abundance (negative correlation with Dp lt 005) showed no detectable correlation with SAMspringand one (Pseudonitzschia lineola) showed a positive rela-tionship indicating that their abundances were determinedby environmental factors that prevail early in the season butnot those factors altered by variations in the SAM Histori-

                    cally the variance in the SAM is lower in the spring quar-ter than in other quarters (NOAA 2005) perhaps explainingwhy SAMspring and SAMprior explained less variance in com-munity composition than SAMautumn

                    We expected the SAM prior to sampling (SAMprior andSAMspring) would show a relationship with phytoplanktoncomposition and a lesser relationship of the SAM in thewinter is plausible because the surface of the ocean is in-sulated from atmospheric conditions by sea ice The relation-ship with the SAM the previous autumn was not expected butis also plausible as it coincides with the time when sea ice isforming and thus a critical time for phytoplankton preparingto hibernate the half-year of sea ice cover We also observeda similar relationship between SAMautumn and (i) NASAsatellite total chlorophyll and (ii) macronutrient concentra-tions across all samples as well as (iii) a stronger correla-tion with macronutrient concentrations when only the sam-ples collected in the latter half of the season were considered(Table 2c d and e respectively) We also observed maximain the autumn SAM relationship in response-surface analy-ses of the correlation between the SAM and (i) NASA satel-lite total chlorophyll and (ii) [PO4] in all samples as well as(iii) a stronger maxima with [PO4] when only the samplescollected later in the season were considered (Figs S1 andS2) Both total chlorophyll and [PO4] were observationallyindependent of the taxonomic cell counts and whilst [PO4]was estimated from parallel samples as the taxonomic analy-sis NASA satellite total chlorophyll had no material connec-tion with collected samples being linked only geographicallyand temporally and thus offers independent support for theunexpected observation that phytoplankton community com-position in the springndashsummer is related to the SAM in theprevious autumn The empirically defined SAMautumn alsoshowed significant (p lt 005) pairwise correlations with 12of the 22 taxa groups resolved (Table 2b)

                    42 Effect of the SAM on phytoplankton taxa

                    Nothing has been previously reported with respect to the cli-matic preferences of the majority of taxa identified in thisstudy and only 10 of the 22 taxa groups considered in ourresearch had data records in the Ocean Biogeographic In-formation System (OBIS 2020) Some of the observed taxahave been reported to show various relationships with en-vironmental factors including sea-surface temperature timethrough the season and latitude but often at the taxonomiclevel of genera rather than at a species level (Burckle et al1987 Chiba et al 2000 Waters et al 2000 Green and Sam-brotto 2006 Gomi et al 2007) We however observed dif-fering responses to environmental variables among closelyrelated taxa This was exemplified by the opposite correla-tions of Chaetoceros species C dicheata and C neglectuswith D (048 and minus070 respectively p lt 00025 Table 2b)and the opposite correlations of Fragilariopsis species Frhombica and F kerguelensis with SAMautumn (minus039 and

                    Biogeosciences 17 3815ndash3835 2020 httpsdoiorg105194bg-17-3815-2020

                    B L Greaves et al SAM influences phytoplankton in SIZ 3829

                    052 respectively p lt 005 Table 2b Fig 5a b) The strongand opposite response to these variables by species belong-ing to the same genus indicates the importance of species-level observation in detecting subtle changes in pelagic phy-toplankton communities

                    A third of analysed taxa comprising 7 taxa and 23 of all counted cells showed no detectable relationship withthe SAM This could be due to large errors associated withlow counts of rarer taxa because unaccounted variation wasmasking any relationship or because the taxa were insensi-tive to the SAM There is less chance of detecting relation-ships between taxa and environment variables when fewerindividuals are counted however some less represented taxadid show relationships with SAM indices (eg Emilianiahuxleyi |r|gt 038 Table 2b) Of the 22 taxa resolved 5showed no significant relationships with either the SAM orD All were comparatively scarce and together representedonly 2 of all cells counted Assessing species composi-tions across a greater fraction of each sample and thus count-ing more of the scarcer taxa may have revealed relationshipsbetween these rarer taxa and environmental variables (Nak-agawa and Cuthill 2007) Yet it remains possible that thesetaxa are actually unaffected by seasonal succession and theSAM instead responding to other environmental variablesthat were not measured as part of this study or that they re-main as persistent but relatively rare background taxa withrespect to the overall phytoplankton assemblage

                    This is the first study to show a link between variationin the SAM and the composition of phytoplankton commu-nities in the SO although similar findings have been re-ported for other major climatic phenomena in other partsof the globe The climatically similar Northern HemisphereAnnular Mode (NAM) causes increased westerly winds anddeeper mixed layers at middle to high northern latitudes inits positive phase (Nehring 1998 Thompson et al 2003Kahru et al 2011) The NAM has been related to the tim-ing abundance and biomass of phytoplankton taxa at highnorthern latitudes (Nehring 1998 Belgrano et al 1999 Ot-tersen et al 2001 Blenckner and Hillebrand 2002) andto the delayed occurrence of maximum chlorophyll in theNorth Atlantic Summer (Kahru et al 2011) Similarly theEl NintildeondashSouthern Oscillation (ENSO) equatorial mode hasbeen shown to influence the distribution and abundance ofphytoplankton in the tropical oceans (Blanchot et al 1992)

                    Phytoplankton are the pastures of the oceans and it is plau-sible that the climate in both autumn and spring influencethe phytoplankton community composition of phytoplank-ton and their ecological progression through the productivespringndashsummer period in the SIZ Climate change impactshave now been documented across every type of ecosystemon Earth (Scheffers et al 2016 Harris et al 2018) and thedistribution abundance phenology and productivity of phy-toplankton communities throughout the world are changingin response to warming acidifying and stratifying oceans(Hoegh-Guldberg and Bruno 2010) We have detected an

                    association between variation in phytoplankton communitycomposition and variation in the SAM over a relatively brief11-year monitoring period despite all the other environmen-tal factors that elicit variability in phytoplankton communi-ties in the SIZ of the SO

                    43 The effects of the SAM on productivity andbiomass

                    A positive SAM has previously been shown to be associ-ated with increased standing stocks and productivity of phy-toplankton in the SIZ of the SO (Arrigo et al 2008 Boyce etal 2010 Soppa et al 2016) In the SIZ above the AntarcticDivergence nutrients are replenished from the deeper oceanthrough the unproductive winter and the levels of nutritionremaining at the end of summer integrate the total draw-down of nutrients by phytoplankton production over the en-tire springndashsummer growing season (Arrigo et al 1999) Weobserved this nutrient drawdown through the springndashsummeras the negative correlation between all macronutrient con-centrations and D (Table 2d) We also observed a nega-tive relationship between all macronutrient concentrations inthe springndashsummer and the previous SAMautumn (Table 2dFig 5d) suggesting that an elevated SAM in autumn leadsto greater productivity and thus greater nutrient drawdownduring the following springndashsummer The nutrient concen-trations at the end of the springndashsummer productive seasonwould be expected to best represent the total productivityover the season we observed that the correlation between nu-trient concentrations and SAMautumn were higher when onlythe 50 of samples collected later in the springndashsummerwere considered (Table 2e) further supporting the conjec-ture that a higher SAM in the autumn is linked with greaterproductivity through the following springndashsummer

                    The observed positive relationship between total chloro-phyll and all the SAM indices (r = 05 to 072 p lt 00025Table 2c) and the presence of apparent spring and autumnmaxima in the response surfaces of the variance in totalchlorophyll explained by the SAM (Fig S1) further sup-port the conjecture that a more positive SAM is linked withgreater total chlorophyll and thus greater total productivityin the SIZ The total chlorophyll data considered were limitedto the 52 samples collected that is estimated for the timesand locations of each sample collection Estimates werecoarsely determined as interpolations of available monthlypredictions (Fig S3) and estimates could be thus obtainedfor only 49 of the 52 samples Yet there are indicators of re-liability in the sparse information the diatom Fragilariopsisrhombica is always relatively small (Table 3) and when therelative abundance of this taxon was high total chlorophyllwas lower (r =minus059 p lt 00025 Table 2b) and when therelative abundance of larger diatoms were high total chloro-phyll was also often high (eg Dactyliosolen antarcticusr = 037 p lt 005 Table 2b)

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                    3830 B L Greaves et al SAM influences phytoplankton in SIZ

                    44 Implications

                    The SIZ is a productive region of the SO (Moore and Abbott2000) and changes to the SIZ phytoplankton communityhave potentially far-reaching implications for the ecosystemservices these organisms provide including carbon exportto the deep ocean and supporting the productivity of almostall Antarctic life Increases in the relative abundance of thelarger Chaetoceros spp diatoms would favour grazing bylarge metazooplankton especially krill (Boyd et al 1984Kawaguchi et al 1999 Moline et al 2004) which linkphytoplankton to whales seabirds seals and most higherAntarctic life forms (Smetacek 2008) Such changes wouldalso increase the efficiency of the biological pump as thelarger phytoplankton sink more rapidly than small phyto-plankton (Alldredge and Gotschalk 1989) and increasedgrazing by krill would reparcel some phytoplankton biomassinto faeces that would also sink more rapidly (Cadeacutee etal 1992) Such changes in carbon flux and trophodynam-ics would act as a negative feedback on climate change byspeeding the sequestration of carbon to the deep ocean

                    The SAM is predicted to become increasingly positivein the future (Arblaster and Meehl 2006 Swart and Fyfe2012 Gillett and Fyfe 2013 Abram et al 2014 Solomonet al 2016) Our results cannot necessarily be extrapolatedto infer changes that will likely occur as the SAM contin-ues to increase as evolutionary responses can partly miti-gate adverse effects on phytoplankton of longer-term climatechange and future changes in climate are likely to imposeother co-stressors on phytoplankton inhabiting these waters(Lohbeck et al 2014 Schluumlter et al 2014 Deppeler andDavidson 2017) Our study showed that some of the vari-ation in the phytoplankton composition in the seasonal icezone was significantly related to variation in the SAM andthat the sign and magnitude of the correlation with the SAMdiffered among species

                    5 Conclusions

                    Statistical analyses indicated that together the autumn andspring SAM explained a higher percentage (179 ) of thevariation in phytoplankton community composition than anyvariable mostly due to the autumn SAM (up to 133 ) Intotal this exceeded the variance explained by any other vari-able even that attributable to the time of the season thatthe sample was collected (154 ) or other critical phys-ical variables such as temperature salinity and latitudeFurthermore 15 of the 22 phytoplankton taxa identified inthis study showed significant correlation with the SAM andthere were indications that a more positive SAM was relatedto increased phytoplankton productivity in the SIZ Whilethis study was limited in both timespan (11 austral springndashsummers) and the overall variance in phytoplankton compo-sition explained by all the constraining variables (375 ) it

                    suggests that the phytoplankton of the SIZ are indeed sensi-tive to changes in the SAM and thus possibly responsive toclimate change

                    Data availability The dataset used in this paper is available athttpsdoiorg10261795d9181f7308bd (Greaves et al 2019)

                    Supplement The supplement related to this article is available on-line at httpsdoiorg105194bg-17-3815-2020-supplement

                    Author contributions Author contributions BLG contributed toconceptualisation data curation formal analysis investigationmethodology software and supervision validation visualisationwriting of the original draft writing and review and editing ATDcontributed to conceptualisation funding acquisition formal anal-ysis methodology project administration resources supervisionwriting and review and editing ADF contributed to formal analy-sis methodology resources writing and review and editing JPMcontributed to formal analysis methodology software writing andreview and editing AM contributed to project administration su-pervision writing and review and editing AMcM contributed tofunding acquisition project administration resources writing andreview and editing SWM contributed to conceptualisation fund-ing acquisition formal analysis writing and review and editing

                    Competing interests The authors declare that they have no conflictof interest

                    Acknowledgements Sampling on Astrolabe was supported bya FrenchndashAustralian research collaboration The Institut PolaireFranccedilais Paul-Eacutemile-Victor supported access to the ship and fieldoperations The biogeochemical data collection was coordinatedby Alain Poisson and Nicolas Metzl Sorbonne Universiteacute andBronte Tilbrook CSIRO Oceans and Atmosphere Steve Rintoul(CSIRO) and Rose Morrow (LEGOS) coordinated the collection ofsalinity and temperature data The Antarctic Climate and Ecosys-tems CRC and the Integrated Marine Observing System are thankedfor supporting the operation of sensors the collection of water sam-ples and nutrient analyses reported in this study Alan Poole MattSherlock John Akl Kate Berry Lesley Clementson Brian Grif-fiths (CSIRO) Rick van den Enden Rob Johnson (AAD) and themany dedicated volunteers and shipsrsquo officers and crew are thankedfor their important contributions to the field efforts and data man-agement We thank the University of Tasmania and the AustralianAntarctic Division for the space and resources needed to undertakethis work Thanks to Nathaniel Bindoff and Simon Wotherspoon fortheir consideration of parts of the paper Thanks are due to the re-viewer Damiano Righetti for the valuable input he provided in par-ticular for pointing out ambiguities and small errors and improvingthe clarity of the paper and an anonymous reviewer for the struc-tural and theoretical considerations Total chlorophyll data used inthis paper were produced with the Giovanni online data system de-veloped and maintained by the NASA GES DISC

                    Biogeosciences 17 3815ndash3835 2020 httpsdoiorg105194bg-17-3815-2020

                    B L Greaves et al SAM influences phytoplankton in SIZ 3831

                    Financial support This research has been supported by the Uni-versity of Tasmania (Institute of Marine and Antarctic Studies) bythe Australian Governmentrsquos Cooperative Research Centre programthrough the Antarctic Climate and Ecosystems CRC the AustralianAntarctic Division (projects 40 and 4107) and by the Australian Re-search Councilrsquos Special Research Initiative for Antarctic GatewayPartnership (project no SR140300001)

                    Review statement This paper was edited by Julia Uitz and re-viewed by Damiano Righetti and one anonymous referee

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                    Greaves B L Davidson A T and Fraser A D The SouthernAnnular Mode (SAM) influences phytoplankton communities inthe seasonal ice zone of the Southern Ocean Ver 1 Australian

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                    Harris R M B Beaumont L J Vance T R Tozer C R Re-menyi T A Perkins-Kirkpatrick S E Mitchell PJ NicotraAB McGregor S Andrew NR Letnic M Kearney M RWernberg T Hutley L B Chambers L E Fletcher M-SKeatley M R Woodward C A Williamson G Duke N Cand Bowman D M J S Biological responses to the press andpulse of climate trends and extreme events Nat Clim Change8 579ndash587 httpsdoiorg101038s41558-018-0187-9 2018

                    Henson S A Yool A and Sanders R Variabilityin efficiency of particulate organic carbon export Amodel study Global Biogeochem Cy 29 33ndash45httpsdoiorg1010022014GB004965 2015

                    Hines K M Bromwich D H and Marshall G J Ar-tificial surface pressure trends in the NCEP-NCAR re-analysis over the Southern Ocean and Antartica JClim 13 3940ndash3952 httpsdoiorg1011751520-0442(2000)013lt3940ASPTITgt20CO2 2000

                    Ho M Kiem A S and Verdon-Kidd D C The Southern An-nular Mode a comparison of indices Hydrol Earth Syst Sci16 967ndash982 httpshttpsdoiorg105194hess-16-967-20122012

                    Hoegh-Guldberg O and Bruno J F The impact of climate changeon the worldrsquos marine ecosystems Science 328 1523ndash1528httpsdoiorg101126science1189930 2010

                    Hydes D J Aoyama M Aminot A Bakker K Becker S Cov-erly S Daniel A Dickson A G Grosso O Kerouel Rvan Ooijen J Sato K Tanhua T Woodward E M S andZhang J Z Determination of Dissolved Nutrients (N P SI)in Seawater With High Precision and Inter-Comparability Us-ing Gas-Segmented Continuous Flow Analysers in The GO-SHIP repeat hydrography manual a collection of expert re-ports and guidelines edited by Hood E M Sabine C Land Sloyan B M IOCCP report number 14 ICPO publicationseries number 134 UNESCO-IOC Paris France available athttpwwwgo-shiporgHydroManhtml (last access 15 January2020) 2010

                    Clem K R Crosta X de Lavergne C Eisenman I Eng-land M H Fogt R L Frankcombe L M MarshallG J Masson-Delmotte V Morrison A K Orsi A JRaphael M N Renwick J A Schneider D P Simp-kins G R Steig E J Stenni B Swingedouw D andVance T R Assessing recent trends in high-latitude SouthernHemisphere surface climate Nat Clim Change 6 917ndash926httpsdoiorg101038nclimate3103 2016

                    Kahru M Brotas V Manzano-Sarabia M and Mitchell B GAre phytoplankton blooms occurring earlier in the Arctic GlobChange Biol 17 1733ndash1739 httpsdoiorg101111j1365-2486201002312x 2011

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                    B L Greaves et al SAM influences phytoplankton in SIZ 3833

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                    Kohyama T and Hartmann D L Antarctic sea ice response toweather and climate modes of variability J Clime 29 721ndash741httpsdoiorg101175JCLI-D-15-03011 2016

                    Kwok R and Comiso J C Southern Ocean climate andsea ice anomalies associated with the Southern Oscilla-tion J Clim 15 487ndash501 httpsdoiorg1011751520-0442(2002)015lt0487SOCASIgt20CO2 2002

                    Lampitt R S and Antia A N Particle flux in deep seas Regionalcharacteristics and temporal variability Deep-Sea Res Pt I44 1377ndash1403 httpsdoiorg101016S0967-0637(97)00020-4 1997

                    Lannuzel D Schoemann V de Jong J Tison J L andChou L Distribution and biogeochemical behaviour of ironin the East Antarctic sea ice Mar Chem 106 18ndash32httpsdoiorg101016jmarchem200606010 2007

                    Lefebvre W Goosse H Timmermann R and FichefetT Influence of the Southern Annular Mode on the seaice-ocean system J Geophys Res-Ocean 109 1ndash12httpsdoiorg1010292004JC002403 2004

                    Legendre P and Anderson M J Distance-based re-dundancy analysis testing multispecies responsesin multifactorial ecological experiments EcolMonogr 69 1ndash24 httpsdoiorg1018900012-9615(1999)069[0001DBRATM]20CO2 1999

                    Legendre P Oksanen J and ter Braak C J Testing thesignificance of canonical axes in redundancy analysis Meth-ods Ecol Evol 2 269ndash277 httpsdoiorg101111j2041-210X201000078x 2011

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                    Lohbeck K T Riebesell U and Reusch T B H Gene expres-sion changes in the coccolithophore Emiliania huxleyi after 500generations of selection to ocean acidification P Roy Soc B281 1ndash7 httpsdoiorg101098rspb20140003 2014

                    Lovenduski N S Gruber N Doney S C and Lima I D En-hanced CO2 outgassing in the Southern Ocean from a positivephase of the Southern Annular Mode Global Biogeochem Cy21 1ndash14 httpsdoiorg1010292006GB002900 2007

                    Lovenduski N S and Gruber N Impact of the Southern AnnularMode on Southern Ocean circulation and biology Geophys ResLett 32 1ndash4 httpsdoiorg1010292005GL022727 2005

                    Mackas D L Does blending of chlorophylldata bias temporal trend Nature 472 E4ndashE5httpsdoiorg101038nature09951 2011

                    Mackintosh A N Anderson B M Lorrey A M Renwick JA Frei P and Dean S M Regional cooling caused recentNew Zealand glacier advances in a period of global warmingNat Commun 8 1ndash13 httpsdoiorg101038ncomms142022017

                    Marshall G J Trends in the Southern Annu-lar Mode from Observations and Reanalyses JClim 16 4134ndash4143 httpsdoiorg1011751520-0442(2003)016lt4134TITSAMgt20CO2 2003

                    Marshall G J Half-century seasonal relationships between theSouthern Annular mode and Antarctic temperatures Int J Cli-matol 27 373ndash383 httpsdoiorg101002joc1407 2007

                    Martin A McMinn A Heath M Hegseth E N and Ryan KG The physiological response to increased temperature in over-wintering sea ice algae and phytoplankton in McMurdo SoundAntarctica and Tromsoslash Sound Norway J Exp Mar Biol Ecol428 57ndash66 httpsdoiorg101016jjembe201206006 2012

                    Massom R A and Stammerjohn S E Antarctic sea ice changeand variability ndash Physical and ecological implications Polar Sci4 149ndash186 httpsdoiorg101016jpolar201005001 2010

                    McMinn A Ashworth C and Ryan K Growth and Productivityof Antarctic Sea Ice Algae under PAR and UV Irradiances BotMar 42 401ndash407 httpsdoiorg101515BOT1999046 1999

                    McMinn A and Martin A Dark survival in awarming world P Roy Soc B 280 20122909httpsdoiorg101098rspb20122909 2013

                    Meredith M P Murphy E J Hawker E J King JC and Wallace M I On the interannual variability ofocean temperatures around South Georgia Southern OceanForcing by El NintildeoSouthern Oscillation and the South-ern Annular Mode Deep-Sea Res Pt II 55 2007ndash2022httpsdoiorg101016jdsr2200805020 2008

                    Mo K C Relationships between low-frequency variability inthe Southern Hemisphere and sea surface temperature anoma-lies J Clim 13 3599ndash3610 httpsdoiorg1011751520-0442(2000)013lt3599rblfvigt20co2 2000

                    Moline M A Claustre H Frazer T K Schofield O andVernet M Alteration of the food web along the Antarc-tic Peninsula in response to a regional warming trend GlobChange Biol 10 1973ndash1980 httpsdoiorg101111j1365-2486200400825x 2004

                    Moore J K and Abbott M R Phytoplankton chloro-phyll distributions and primary production in the South-ern Ocean J Geophys Res-Ocean 105 28709ndash28722httpsdoiorg1010291999JC000043 2000

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                    Nakagawa S and Cuthill I C Effect size confidence inter-val and statistical significance a practical guide for biolo-gists Biol Rev 82 591ndash605 httpsdoiorg101111j1469-185X200700027x 2007

                    Nehring S Establishment of thermophilic phytoplankton speciesin the North Sea biological indicators of climatic changesShort communication ICES J Mar Sci 55 818ndash823httpsdoiorg101006jmsc19980389 1998

                    NOAA Teleconnection Pattern Calculation ProceduresClimate Prediction Center Internet Team available athttpswwwcpcncepnoaagovproductsprecipCWlinkdaily_ao_indexhistorymethodshtmlvar (last access 15 June 2017)2005

                    NOAA NCEP-DOE Reanalysis 2 data provided by theNOAAOARESRL PSD Boulder Colorado USA available athttpswwwcpcncepnoaagovproductsprecipCWlinkENSOverfnewaaoshtml last access 25 June 2017

                    OBIS Ocean Biogeographic Information System Intergovernmen-tal Oceanographic Commission of UNESCO available at httpwwwiobisorg last access 18 February 2020

                    httpsdoiorg105194bg-17-3815-2020 Biogeosciences 17 3815ndash3835 2020

                    3834 B L Greaves et al SAM influences phytoplankton in SIZ

                    Ottersen G Planque B Belgrano A Post E ReidP C and Stenseth N C Ecological effects of theNorth Atlantic Oscillation Oecologia 128 1ndash14httpsdoiorg101007s004420100655 2001

                    Parkinson C L A 40-y record reveals gradual Antarctic sea iceincreases followed by decreases at rates far exceeding the ratesseen in the Arctic P Natl Acad Sci USA 116 14414ndash14423httpsdoiorg101073pnas1906556116 2019

                    R Core Team R A Language and Environment for Statistical Com-puting R Foundation for Statistical Computing Vienna Austria2016

                    Rigual-Hernaacutendez A S Trull T W Bray S G Closset Iand Armand L K Seasonal dynamics in diatom and par-ticulate export fluxes to the deep sea in the Australian sec-tor of the southern Antarctic Zone J Mar Syst 142 62ndash74httpsdoiorg101016jjmarsys201410002 2015

                    Roach L A Smith M M and Dean S M Quantify-ing growth of pancake sea ice floes using images fromdrifting buoys J Geophys Res-Ocean 123 2851ndash2866httpsdoiorg1010022017JC013693 2018

                    Rodgers J L and Nicewander W A Thirteen Ways toLook at the Correlation Coefficient Am Stat 42 59ndash66httpsdoiorg10108000031305198810475524 1988

                    Saenz B T and Arrigo K R Annual primary produc-tion in Antarctic sea ice during 2005-2006 from a sea icestate estimate J Geophys Res-Ocean 119 3645ndash3678httpsdoiorg1010022013JC009677 2014

                    Sarthou G Timmermans K R Blain S and Treacuteguer P Growthphysiology and fate of diatoms in the ocean a review J Sea Res53 25ndash42 httpsdoiorg101016jseares200401007 2005

                    Savidge G Priddle J Gilpin L C Bathmann U Murphy EJ Owens N J P Pollard R T Turner D R Veth C andBoyd P An assessment of the role of the marginal ice zone inthe carbon cycle of the Southern Ocean Antarct Sci 8 349ndash358 httpsdoiorg101017S0954102096000521 1996

                    Scheffers B R De Meester L Bridge T C L HoffmannA A Pandolfi J M Corlett R T Butchart S H MPearce-Kelly P Kovacs K M Dudgeon D Pacifici MRondinini C Foden W B Martin T G Mora C Bick-ford D and Watson J E M The broad footprint of climatechange from genes to biomes to people Science 354 aaf7671httpsdoiorg101126scienceaaf7671 2016

                    Schiermeier Q Atmospheric science fixing the sky Nature 460792ndash795 httpsdoiorg101038460792a 2009

                    Schluumlter L Lohbeck K T Gutowska M A Groumlger J P Riebe-sell U and Reusch T B H Adaptation of a globally importantcoccolithophore to ocean warming and acidification Nat ClimChange 4 1024ndash1030 httpsdoiorg101038nclimate23792014

                    Scott F J and Marchant H J (Eds) Antarctic marine protistsAustralian Biological Resources Study Canberra and HobartAustralia 541 pp httpsdoiorg101017s00322474052448192005

                    Sen Gupta A and England M H Coupled oceanndashatmospherendashiceresponse to variations in the Southern Annular Mode J Clim19 4457ndash4486 httpsdoiorg101175JCLI38431 2006

                    Smetacek V and Nicol S Polar ocean ecosys-tems in a changing world Nature 437 362ndash368httpsdoiorg101038nature04161 2005

                    Smetacek V Are declining krill stocks a result of global warmingor of the decimation of the whales in Impacts of global warmingon polar systems Fundacioacuten BBVA edited by Duarte C MBilbao 47ndash83 2008

                    Solomon S Ivy D J Kinnison D Mills M J Neely R R andSchmidt A Emergence of healing in the Antarctic ozone layerScience 353 269ndash274 httpsdoiorg101126scienceaae00612016

                    Son S W Tandon N F Polvani L M and Waugh D W Ozonehole and Southern Hemisphere climate change Geophys ResLett 36 1ndash5 httpsdoiorg1010292009GL038671 2009

                    Soppa M Voumllker C and Bracher A Diatom Phenol-ogy in the Southern Ocean Mean Patterns Trends andthe Role of Climate Oscillations Remote Sens 8 1ndash7httpsdoiorg103390rs8050420 2016

                    Spreen G Kaleschke L and Heygster G Sea ice remote sensingusing AMSR-E 89-GHz channels J Geophys Res-Ocean 113C02S03 httpsdoiorg1010292005JC003384 2008

                    Squire V A Ocean wave interactions with sea icea reappraisal Annu Rev Fluid Mech 52 37ndash60httpsdoiorg101146annurev-fluid-010719-060301 2020

                    Steinacher M Joos F Froumllicher T L Bopp L Cadule PCocco V Doney S C Gehlen M Lindsay K Moore J KSchneider B and Segschneider J Projected 21st century de-crease in marine productivity a multi-model analysis Biogeo-sciences 7 979ndash1005 httpsdoiorg105194bg-7-979-20102010

                    Swart N C and Fyfe J C Observed and simulated changes inthe Southern Hemisphere surface westerly wind-stress GeophysRes Lett 39 1ndash6 httpsdoiorg1010292012GL0528102012

                    Swart N C Fyfe J C Gillett N and Marshall G J Compar-ing Trends in the Southern Annular Mode and Surface WesterlyJet J Clim 28 8840ndash8859 httpsdoiorg101175JCLI-D-15-03341 2015

                    Swiło M Majewski W Minzoni R T and Ander-son J B Diatom assemblages from coastal settingsof West Antarctica Mar Micropaleontol 125 95ndash109httpsdoiorg101016jmarmicro201604001 2016

                    Takahashi T Sutherland S C Wanninkhof R Sweeney CFeely R A Chipman D W Hales B Friederich G ChavezF Sabine C Watson A Bakker D C E Schuster U MetzlN Yoshikawa-Inoue H Ishii M Midorikawa T Nojiri YKoumlrtzinger A Steinhoff T Hoppema M Olafsson J Arnar-son T S Tilbrook B Johannessen T Olsen A Bellerby RWong C S Delille B Bates N R and de Baar H J W Cli-matological mean and decadal change in surface ocean pCO2and net seandashair CO2 flux over the global oceans Deep-Sea ResPt II 56 554ndash577 httpsdoiorg101016jdsr22008120092009

                    Taljaard J J Development Distribution and Move-ment of Cyclones and Anticyclones in the South-ern Hemisphere During the IGY J Appl Me-teorol 6 973ndash987 httpsdoiorg1011751520-0450(1967)006lt0973DDAMOCgt20CO2 1967

                    Taylor F and Sjunneskog C Postglacial marine diatom recordof the Palmer Deep Antarctic Peninsula (ODP Leg 178 Site1098) 2 Diatom assemblages Paleoceanography 17 1ndash12httpsdoiorg1010292000PA000564 2002

                    Biogeosciences 17 3815ndash3835 2020 httpsdoiorg105194bg-17-3815-2020

                    B L Greaves et al SAM influences phytoplankton in SIZ 3835

                    Ter Braak C J and Verdonschot P F Canonical correspondenceanalysis and related multivariate methods in aquatic ecologyAquat Sci 57 255ndash289 httpsdoiorg101007BF008774301995

                    Thompson D W Lee S and Baldwin M P Atmospheric pro-cesses governing the northern hemisphere annular modeNorthAtlantic oscillation Geoph Monog Series 134 81ndash112 2003

                    Thompson D W Solomon S Kushner P J England M HGrise K M and Karoly D J Signatures of the Antarcticozone hole in Southern Hemisphere surface climate change NatGeosci 4 741ndash749 2011

                    Thompson D W J and Solomon S Interpretation of RecentSouthern Hemisphere Climate Change Science 296 895ndash899httpsdoiorg101126science1069270 2002

                    Tomas C R (Ed) Identifying marine phytoplankton Academicpress San Diego California 858 pp 1997

                    Turner J Bracegirdle T J Phillips T Marshall G J and Hosk-ing J S An initial assessment of Antarctic sea ice extent in theCMIP5 models J Clim 26 1473ndash1484 2013

                    Turner J Summerhayes C Sparrow M Mayewski P ConveyP di Prisco G Gutt J Hodgson D Speich S Worby TBo S and Klepikov A Antarctic climate change and the envi-ronment ndash 2015 update Antarctic Treaty Consultative MeetingSofia Bulgaria June 2015 IP 92 2015

                    Waters R L Van Den Enden R and Marchant H J Summer mi-crobial ecology off East Antarctica (80ndash150 E) protistan com-munity structure and bacterial abundance Deep-Sea Res Pt II47 2401ndash2435 httpsdoiorg101016S0967-0645(00)00030-8 2000

                    Webb T and Bryson R A Late-and postglacial climatic changein the northern Midwest USA quantitative estimates derivedfrom fossil pollen spectra by multivariate statistical analy-sis Quaternary Res 2 70ndash115 httpsdoiorg1010160033-5894(72)90005-1 1972

                    Whitaker D and Christman M clustsig Significant Cluster Anal-ysis R package version 11 2014

                    Wilson D L Smith Jr W O and Nelson D M Phytoplanktonbloom dynamics of the western Ross Sea ice edge ndash I Primaryproductivity and species-specific production Deep-Sea Res PtI 33 1375ndash1387 httpsdoiorg1010160198-0149(86)90041-5 1986

                    Wright S W van den Enden R L Pearce I David-son A T Scott F J and Westwood K J Phyto-plankton community structure and stocks in the SouthernOcean (30ndash80 E) determined by CHEMTAX analysis ofHPLC pigment signatures Deep-Sea Res Pt II 57 758ndash778httpsdoiorg101016jdsr2200906015 2010

                    httpsdoiorg105194bg-17-3815-2020 Biogeosciences 17 3815ndash3835 2020

                    • Abstract
                    • Introduction
                      • Importance of the SIZ phytoplankton bloom
                      • The Southern Annular Mode
                      • The hypothesis
                        • Methods
                          • Phytoplankton relative abundance
                          • Environmental covariates
                          • Statistical analysis
                            • Results
                              • The influence of the SAM on phytoplankton community composition
                              • Influence of the SAM on phytoplankton productivity
                              • Observed occurrence and abundance
                                • Discussion
                                  • The SAM and phytoplankton community composition
                                  • Effect of the SAM on phytoplankton taxa
                                  • The effects of the SAM on productivity and biomass
                                  • Implications
                                    • Conclusions
                                    • Data availability
                                    • Supplement
                                    • Author contributions
                                    • Competing interests
                                    • Acknowledgements
                                    • Financial support
                                    • Review statement
                                    • References

                      B L Greaves et al SAM influences phytoplankton in SIZ 3825

                      Figure 5 Scatter-plots (a b) examples of phytoplankton taxon relative abundance versus SAMautumn (c) LONGE of sample collectionversus D and (d) [PO4] versus SAMautumn Each figure shows r2 and p associated with the relationship A line of least-squares best fit isprovided to give an indication of trend

                      groups When applying the conservative Bonferroni-adjustedα = 00025 seven taxa groups showed significant correlation(p lt 00025) with any SAM index and four with SAMautumn

                      SAMprior and SAMspring represented a similar time span inthe spring immediately prior to sampling (Fig 4) and werestrongly and significantly correlated (r = 083 Table 2cp lt 0001) Samples were collected over a calendar rangeof 140 d (20 Octoberndash28 February Table 2a) and thus the97 d period represented by SAMprior varied in its positionin the calendar across the 140 d spread of the 52 samples(Fig 4) SAMprior and SAMspring also showed similar corre-lation signs with taxa group relative abundances (Table 2b)It was not possible however to determine whether the pre-season SAM influence was a spring effect or a prior-to-sampling effect and whilst both appear to be important ex-planatory terms only SAMprior was retained in the optimumCAP model (Table 1b)

                      In the optimum multi-covariate CAP model D explainedthe greatest proportion of the observed variance in phyto-plankton community composition (Table 1b) D was signif-icantly correlated (p lt 00025) with SST S and DSSI andthe variable singly captured the most variation in phytoplank-ton community composition associated with seasonal suc-cession Alone it explained 154 of the total variance (Ta-

                      ble 1b) with its effect on the phytoplankton community be-ing approximately orthogonal to that of the SAM (Fig 6a) Aweak positive relationship detected between SAMautumn andD indicated a weak trend of sampling later in the springndashsummer period in years with a higher autumn SAM (r =032 Table 2c p = 002) but otherwise the SAM indicesand D were un-related

                      A total of 10 taxa groups showed significant correlation(p lt 005) between their relative abundance and D (Ta-ble 2b) Chaetoceros castracanei C neglectus D specu-lum E huxleyi N acicularisdecipiens Parmales P line-ola and the discoid centric diatoms showed negative relative-abundance correlations with D indicating greatest relativeabundance early in the springndashsummer while C concavicor-niscurvatus and C dichaeta showed greater relative abun-dance later in the springndashsummer A negative correlation(minus063 p lt 0001) was detected between the longitude ofindividual sample collection (LONGE) and D indicatingthat samples collected later in the springndashsummer were morelikely to have been collected towards the west in the sampledregion (Table 2c Fig 5c)

                      Following cluster analysis similarity profile (SIMPROF)permutation analysis identified seven significantly differentgroups (p lt 005) with samples loosely grouped on the ba-

                      httpsdoiorg105194bg-17-3815-2020 Biogeosciences 17 3815ndash3835 2020

                      3826 B L Greaves et al SAM influences phytoplankton in SIZ

                      Figure 6 (a) CAP analysis of phytoplankton community composition Dots represent individual samples with colours corresponding tosignificant clusters (Fig 6b) The 22 phytoplankton taxagroups are overlain as weighted averages of their sample scores (red abbreviationsafter Fig 2) with positions plotted with a 3-times-larger distance from the origin to more easily visualise their relationships with constrainingenvironmental variables Linear projections of the significant constraining environmental covariates appear as blue arrows the length andangle of which represent the magnitude and direction of influence of each variable on community composition The inset shows the taxalocated close to the origin diatoms fri and cyc collocating (b) Cluster analysis dendrogram of the 52 samples based on similarities inphytoplankton community structure using colour to show seven significantly different groups (numbered 1ndash7 solid lines α = 005) Samplelabels contain season and voyage (eg 0809v2b= austral springndashsummer over 2008ndash2009 voyage designation 2 sample b is the secondsample obtained from the SIZ during that voyage) SAMautumn value SAMprior value and the D value

                      sis of their within-season successional maturity (D) and theSAM (Fig 6b) and demonstrated that there were signifi-cant differences between the community composition of thesamples The group structure determined by cluster analy-sis was displayed in the CAP ordination (using colour) todemonstrate that samples that clustered together were indeedclose to one another in the two-dimensional (2D) ordina-tion (Fig 6a) with their positioning further indicating theinfluences of D and the SAM on cluster groupings This lentconfidence that the 2D ordination was a reasonable approx-imation to the full high-dimensional structure As we knewthe values for the environmental covariates for each sam-ple it was possible to determine the correlation between the2D CAP solution and each environmental covariate We dis-played these correlations as a projected vector (arrow) wheredirection indicates the sign and length indicates strengthThis showed samples in clusters 3 and 4 (Fig 6b) were com-monly associated with a more positive SAM while those inclusters 5 6 and 7 were commonly associated with morenegative SAM values Samples in clusters 2 and 5 were com-

                      monly collected earlier in the springndashsummer period (lowerD) while those in clusters 1 4 6 and 7 were commonly col-lected later (Fig 6)

                      Other considered environmental covariates that did notsignificantly influence community composition were thetime of the day that a sample was collected and the mini-mum latitude reached by sea ice cover in the previous winter(Supplement Table S1)

                      These analyses were also undertaken using phytoplanktonabsolute abundances rather than with relative abundances asreported above The analysis of absolute abundance showedsimilar temporal peaks in variance explained (SupplementFig S4) although it explained less variance (SAMautumn ex-plaining 109 SAMspring 91 and SAMprior 92 ) (Ta-ble S3) Individual taxa correlations with SAM indices (Ta-ble S4) showed a similar pattern to those estimated using rel-ative abundances (Table 2b)

                      Biogeosciences 17 3815ndash3835 2020 httpsdoiorg105194bg-17-3815-2020

                      B L Greaves et al SAM influences phytoplankton in SIZ 3827

                      32 Influence of the SAM on phytoplanktonproductivity

                      Two indicators of the influence of the SAM on phytoplank-ton productivity were obtained (i) the influence of the SAMon satellite-derived total chlorophyll and (ii) the influence ofthe SAM on macronutrient concentrations indicating nutri-ent drawdown associated with productivity Using the timesand locations of the 52 samples over the 11 years of ourstudy satellite-derived total chlorophyll showed positive cor-relation with all SAM indices r = 050 (p lt 0001) withSAMautumn r = 072 (p lt 0001) with SAMprior and r =069 (p lt 0001) with SAMspring (Table 2c) Peaks in thecorrelation of total chlorophyll with the SAM were evidentin the preceding autumn and spring and prior to sampling inresponse surfaces for NASA satellite total chlorophyll alongwith a peak in early winter (Fig S1) While further data arerequired to confirm this correlation the results obtained inthis study supported the presence of a positive relationshipbetween productivity and the SAM

                      The observed concentrations of the macronutrients NOx PO4 and SiO4 showed significant negative correlationswith SAMautumn (r =minus039 minus056 minus042 respectively Ta-ble 2d p 0005 lt 0001 0002 respectively) The concen-trations of these nutrients showed stronger negative correla-tions with SAMautumn when the 50 of samples collectedlatest in the springndashsummer season was considered (r =minus058 minus074 minus051 Table 2e p 0002 lt 0001 0008respectively) Macronutrient concentrations were unrelatedto either SAMprior or SAMspring (Table 2d) Peaks in neg-ative correlation of the SAM on [PO4] were evident in thepreceding autumn and spring prior to sampling in responsesurfaces with the peaks being more negative when only the50 of samples collected later in the springndashsummer wereconsidered (Fig S2) The concentrations of macronutrientsalso showed expected decline through the springndashsummercorrelations between [NOx] [PO4] and [SiO4] withD wereminus077minus073 andminus056 respectively (Table 2d p lt 0001lt 0001 lt 0001 respectively)

                      33 Observed occurrence and abundance

                      Abundance of individual taxa groups averaged 133 cells permillilitre and ranged to a maximum of 8796 cells per mL (Ta-ble 3) Individual cell volume ranged from 8 microm3 for the Par-males spp to gt 60 000 microm3 for the diatoms Dactyliosolenantarcticus and Thalassiothrix antarctica Average relativeabundance ranged from 02 for the diatom Fragilariopsisritscheri to 17 for the combined taxa group Fragilariop-sis cylindruscurta Of the 22 taxa groups resolved in thisstudy four taxa groups were identified in all 52 samples and11 taxa groups were identified in more than 90 of samples(Table 3)

                      4 Discussion

                      41 The SAM and phytoplankton communitycomposition

                      Our results show that the SAM shows a relationship withthe community composition of phytoplankton in the sea-sonal ice zone (SIZ) of the Southern Ocean (SO) This con-clusion was supported by a combination of three analyses(i) Permutation-based analyses of cluster structure demon-strated that the 52 samples were separable into seven statisti-cally different groups on the basis of community abundancecomposition of the 22 taxa groups (Fig 6b) and thus thatthere was variation between samples that might be explain-able with known environmental variables if clustering hadrevealed few or no clusters it would have been indicative oflevels of community variance (either high or low) unlikelyto be systematically explainable with the environmental vari-ables (ii) CAP analysis identified the SAM as a significantexplanatory variable on the structure of the phytoplanktoncommunity (Table 1b) and showed that groups identified incluster analysis were generally distinguished by the SAMand the D that a sample was collected (Fig 6) (iii) 15 ofthe 22 taxa groups resolved showed significant pairwise cor-relations (p lt 005) between relative abundance and at leastone of the three derived SAM indices (Table 2b)

                      The derived SAM index with greatest influence on phy-toplankton community composition SAMautumn (Figs 3 4)explained 126 of the variance of phytoplankton commu-nity composition in the optimum multi-variable CAP model(Table 1b) SAMautumn represented the average SAM aroundthe time that sea ice was extending northward through theSIZ (Fig 1a) At this time phytoplankton productivity inthe SIZ would have declined to around 30 of its mid-summer maximum (Moore and Abbott 2000 Arrigo et al2008 Constable et al 2014) and phytoplankton would bepreparing for winter by variously producing energy stor-age products producing resting spores or cysts reducingmetabolic rate and engaging in heterotrophic consumptionfor energy (Fryxell 1989 McMinn and Martin 2013) Theformation of sea ice reduces available light by as much as999 (McMinn et al 1999) severely limiting light forphytoplankton for around half of each year at the rangeof longitude sampled latitude 64 S was covered in seaice for half the time across the sampled years (Fig 1a)Windier conditions associated with a more positive SAM inautumn may delay the consolidation of sea ice into largerfloes (Roach et al 2018) extending the phytoplankton grow-ing season and possibly increasing the relative abundanceof taxa that occur later in the springndashsummer season Thequantity of phytoplankton that survive the Antarctic winteris extremely low (McMinn and Martin 2013) and the abun-dance of taxa present and their metabolic condition whenthe autumn sea ice forms may strongly influence their vi-ability relative vigour and availability to seed the subse-

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                      3828 B L Greaves et al SAM influences phytoplankton in SIZ

                      quent post-winter bloom This possibility was supported bythe observation that the only two taxa groups observed tohave significantly (p lt 005) higher relative abundance laterin the springndashsummer the Chaetoceros species C dichaetaand C concavicorniscurvatus were both observed to alsoshow significantly higher relative abundances when the pre-ceding SAMautumn was more positive (Table 2b) Thus SAM-induced effects on phytoplankton in the autumn could wellinfluence the phytoplankton community structure in the fol-lowing post-winter productive season

                      Extending the springndashsummer productive season by de-laying the autumn consolidation of sea ice may result inmore prolonged declines in relative abundance of taxa thatare more prolific earlier in the springndashsummer and may thusreduce the population from which the following post-winterbloom is initiated Of the eight taxa groups showing sta-tistically higher relative abundance earlier in the springndashsummer (p lt 005) three showed corresponding statisticallylower relative abundances with higher preceding SAMautumn(Emiliana huxleyi Nitzschia acicularisdecipiens and Par-males spp p lt 005 Table 2b) supporting this conjec-ture Of the remaining five taxa groups of the eight fourshowed no detectable relationship with SAMautumn and one(Pseudonitzschia lineola) showed a positive relationship

                      Two other derived SAM indices were found to influencephytoplankton SAMspring and SAMprior These indices weredifficult to distinguish due to their largely overlapping timeperiods (Fig 4) and they were strongly correlated (r = 083p lt 005 Table 2c) with similar influence on taxonomicabundances (Table 2b) SAMprior was the preferred parame-ter for the multiparameter CAP model in which it explained43 of total variance Windier and stormier conditions as-sociated with a higher SAM in the months prior to sam-pling would increase nutrient input to the euphotic zone fromdeeper waters (Lovenduski and Gruber 2005) promotingproductivity whilst at the same time episodically dilutingsurface phytoplankton through deeper mixing More stormyconditions may also have brought about a faster break-upof winter sea ice promoting earlier spring phytoplanktongrowth Conversely windier conditions would also restrictstratification of the surface ocean precluding phytoplanktonbloom formation lessening productivity (Fitch and Moore2007) and reducing the abundance of early blooming taxaThis may explain the responses of Emiliania huxleyi and thecombined Nitzschia acicularisdecipiens group which bothshowed early maximum abundances (r =minus028 and minus047respectively with D p lt 005 Table 2b) and also nega-tive correlations with SAMspring and SAMprior (r =minus029to minus042 p lt 005 Table 2b) Five other taxa groups withearly maximum abundance (negative correlation with Dp lt 005) showed no detectable correlation with SAMspringand one (Pseudonitzschia lineola) showed a positive rela-tionship indicating that their abundances were determinedby environmental factors that prevail early in the season butnot those factors altered by variations in the SAM Histori-

                      cally the variance in the SAM is lower in the spring quar-ter than in other quarters (NOAA 2005) perhaps explainingwhy SAMspring and SAMprior explained less variance in com-munity composition than SAMautumn

                      We expected the SAM prior to sampling (SAMprior andSAMspring) would show a relationship with phytoplanktoncomposition and a lesser relationship of the SAM in thewinter is plausible because the surface of the ocean is in-sulated from atmospheric conditions by sea ice The relation-ship with the SAM the previous autumn was not expected butis also plausible as it coincides with the time when sea ice isforming and thus a critical time for phytoplankton preparingto hibernate the half-year of sea ice cover We also observeda similar relationship between SAMautumn and (i) NASAsatellite total chlorophyll and (ii) macronutrient concentra-tions across all samples as well as (iii) a stronger correla-tion with macronutrient concentrations when only the sam-ples collected in the latter half of the season were considered(Table 2c d and e respectively) We also observed maximain the autumn SAM relationship in response-surface analy-ses of the correlation between the SAM and (i) NASA satel-lite total chlorophyll and (ii) [PO4] in all samples as well as(iii) a stronger maxima with [PO4] when only the samplescollected later in the season were considered (Figs S1 andS2) Both total chlorophyll and [PO4] were observationallyindependent of the taxonomic cell counts and whilst [PO4]was estimated from parallel samples as the taxonomic analy-sis NASA satellite total chlorophyll had no material connec-tion with collected samples being linked only geographicallyand temporally and thus offers independent support for theunexpected observation that phytoplankton community com-position in the springndashsummer is related to the SAM in theprevious autumn The empirically defined SAMautumn alsoshowed significant (p lt 005) pairwise correlations with 12of the 22 taxa groups resolved (Table 2b)

                      42 Effect of the SAM on phytoplankton taxa

                      Nothing has been previously reported with respect to the cli-matic preferences of the majority of taxa identified in thisstudy and only 10 of the 22 taxa groups considered in ourresearch had data records in the Ocean Biogeographic In-formation System (OBIS 2020) Some of the observed taxahave been reported to show various relationships with en-vironmental factors including sea-surface temperature timethrough the season and latitude but often at the taxonomiclevel of genera rather than at a species level (Burckle et al1987 Chiba et al 2000 Waters et al 2000 Green and Sam-brotto 2006 Gomi et al 2007) We however observed dif-fering responses to environmental variables among closelyrelated taxa This was exemplified by the opposite correla-tions of Chaetoceros species C dicheata and C neglectuswith D (048 and minus070 respectively p lt 00025 Table 2b)and the opposite correlations of Fragilariopsis species Frhombica and F kerguelensis with SAMautumn (minus039 and

                      Biogeosciences 17 3815ndash3835 2020 httpsdoiorg105194bg-17-3815-2020

                      B L Greaves et al SAM influences phytoplankton in SIZ 3829

                      052 respectively p lt 005 Table 2b Fig 5a b) The strongand opposite response to these variables by species belong-ing to the same genus indicates the importance of species-level observation in detecting subtle changes in pelagic phy-toplankton communities

                      A third of analysed taxa comprising 7 taxa and 23 of all counted cells showed no detectable relationship withthe SAM This could be due to large errors associated withlow counts of rarer taxa because unaccounted variation wasmasking any relationship or because the taxa were insensi-tive to the SAM There is less chance of detecting relation-ships between taxa and environment variables when fewerindividuals are counted however some less represented taxadid show relationships with SAM indices (eg Emilianiahuxleyi |r|gt 038 Table 2b) Of the 22 taxa resolved 5showed no significant relationships with either the SAM orD All were comparatively scarce and together representedonly 2 of all cells counted Assessing species composi-tions across a greater fraction of each sample and thus count-ing more of the scarcer taxa may have revealed relationshipsbetween these rarer taxa and environmental variables (Nak-agawa and Cuthill 2007) Yet it remains possible that thesetaxa are actually unaffected by seasonal succession and theSAM instead responding to other environmental variablesthat were not measured as part of this study or that they re-main as persistent but relatively rare background taxa withrespect to the overall phytoplankton assemblage

                      This is the first study to show a link between variationin the SAM and the composition of phytoplankton commu-nities in the SO although similar findings have been re-ported for other major climatic phenomena in other partsof the globe The climatically similar Northern HemisphereAnnular Mode (NAM) causes increased westerly winds anddeeper mixed layers at middle to high northern latitudes inits positive phase (Nehring 1998 Thompson et al 2003Kahru et al 2011) The NAM has been related to the tim-ing abundance and biomass of phytoplankton taxa at highnorthern latitudes (Nehring 1998 Belgrano et al 1999 Ot-tersen et al 2001 Blenckner and Hillebrand 2002) andto the delayed occurrence of maximum chlorophyll in theNorth Atlantic Summer (Kahru et al 2011) Similarly theEl NintildeondashSouthern Oscillation (ENSO) equatorial mode hasbeen shown to influence the distribution and abundance ofphytoplankton in the tropical oceans (Blanchot et al 1992)

                      Phytoplankton are the pastures of the oceans and it is plau-sible that the climate in both autumn and spring influencethe phytoplankton community composition of phytoplank-ton and their ecological progression through the productivespringndashsummer period in the SIZ Climate change impactshave now been documented across every type of ecosystemon Earth (Scheffers et al 2016 Harris et al 2018) and thedistribution abundance phenology and productivity of phy-toplankton communities throughout the world are changingin response to warming acidifying and stratifying oceans(Hoegh-Guldberg and Bruno 2010) We have detected an

                      association between variation in phytoplankton communitycomposition and variation in the SAM over a relatively brief11-year monitoring period despite all the other environmen-tal factors that elicit variability in phytoplankton communi-ties in the SIZ of the SO

                      43 The effects of the SAM on productivity andbiomass

                      A positive SAM has previously been shown to be associ-ated with increased standing stocks and productivity of phy-toplankton in the SIZ of the SO (Arrigo et al 2008 Boyce etal 2010 Soppa et al 2016) In the SIZ above the AntarcticDivergence nutrients are replenished from the deeper oceanthrough the unproductive winter and the levels of nutritionremaining at the end of summer integrate the total draw-down of nutrients by phytoplankton production over the en-tire springndashsummer growing season (Arrigo et al 1999) Weobserved this nutrient drawdown through the springndashsummeras the negative correlation between all macronutrient con-centrations and D (Table 2d) We also observed a nega-tive relationship between all macronutrient concentrations inthe springndashsummer and the previous SAMautumn (Table 2dFig 5d) suggesting that an elevated SAM in autumn leadsto greater productivity and thus greater nutrient drawdownduring the following springndashsummer The nutrient concen-trations at the end of the springndashsummer productive seasonwould be expected to best represent the total productivityover the season we observed that the correlation between nu-trient concentrations and SAMautumn were higher when onlythe 50 of samples collected later in the springndashsummerwere considered (Table 2e) further supporting the conjec-ture that a higher SAM in the autumn is linked with greaterproductivity through the following springndashsummer

                      The observed positive relationship between total chloro-phyll and all the SAM indices (r = 05 to 072 p lt 00025Table 2c) and the presence of apparent spring and autumnmaxima in the response surfaces of the variance in totalchlorophyll explained by the SAM (Fig S1) further sup-port the conjecture that a more positive SAM is linked withgreater total chlorophyll and thus greater total productivityin the SIZ The total chlorophyll data considered were limitedto the 52 samples collected that is estimated for the timesand locations of each sample collection Estimates werecoarsely determined as interpolations of available monthlypredictions (Fig S3) and estimates could be thus obtainedfor only 49 of the 52 samples Yet there are indicators of re-liability in the sparse information the diatom Fragilariopsisrhombica is always relatively small (Table 3) and when therelative abundance of this taxon was high total chlorophyllwas lower (r =minus059 p lt 00025 Table 2b) and when therelative abundance of larger diatoms were high total chloro-phyll was also often high (eg Dactyliosolen antarcticusr = 037 p lt 005 Table 2b)

                      httpsdoiorg105194bg-17-3815-2020 Biogeosciences 17 3815ndash3835 2020

                      3830 B L Greaves et al SAM influences phytoplankton in SIZ

                      44 Implications

                      The SIZ is a productive region of the SO (Moore and Abbott2000) and changes to the SIZ phytoplankton communityhave potentially far-reaching implications for the ecosystemservices these organisms provide including carbon exportto the deep ocean and supporting the productivity of almostall Antarctic life Increases in the relative abundance of thelarger Chaetoceros spp diatoms would favour grazing bylarge metazooplankton especially krill (Boyd et al 1984Kawaguchi et al 1999 Moline et al 2004) which linkphytoplankton to whales seabirds seals and most higherAntarctic life forms (Smetacek 2008) Such changes wouldalso increase the efficiency of the biological pump as thelarger phytoplankton sink more rapidly than small phyto-plankton (Alldredge and Gotschalk 1989) and increasedgrazing by krill would reparcel some phytoplankton biomassinto faeces that would also sink more rapidly (Cadeacutee etal 1992) Such changes in carbon flux and trophodynam-ics would act as a negative feedback on climate change byspeeding the sequestration of carbon to the deep ocean

                      The SAM is predicted to become increasingly positivein the future (Arblaster and Meehl 2006 Swart and Fyfe2012 Gillett and Fyfe 2013 Abram et al 2014 Solomonet al 2016) Our results cannot necessarily be extrapolatedto infer changes that will likely occur as the SAM contin-ues to increase as evolutionary responses can partly miti-gate adverse effects on phytoplankton of longer-term climatechange and future changes in climate are likely to imposeother co-stressors on phytoplankton inhabiting these waters(Lohbeck et al 2014 Schluumlter et al 2014 Deppeler andDavidson 2017) Our study showed that some of the vari-ation in the phytoplankton composition in the seasonal icezone was significantly related to variation in the SAM andthat the sign and magnitude of the correlation with the SAMdiffered among species

                      5 Conclusions

                      Statistical analyses indicated that together the autumn andspring SAM explained a higher percentage (179 ) of thevariation in phytoplankton community composition than anyvariable mostly due to the autumn SAM (up to 133 ) Intotal this exceeded the variance explained by any other vari-able even that attributable to the time of the season thatthe sample was collected (154 ) or other critical phys-ical variables such as temperature salinity and latitudeFurthermore 15 of the 22 phytoplankton taxa identified inthis study showed significant correlation with the SAM andthere were indications that a more positive SAM was relatedto increased phytoplankton productivity in the SIZ Whilethis study was limited in both timespan (11 austral springndashsummers) and the overall variance in phytoplankton compo-sition explained by all the constraining variables (375 ) it

                      suggests that the phytoplankton of the SIZ are indeed sensi-tive to changes in the SAM and thus possibly responsive toclimate change

                      Data availability The dataset used in this paper is available athttpsdoiorg10261795d9181f7308bd (Greaves et al 2019)

                      Supplement The supplement related to this article is available on-line at httpsdoiorg105194bg-17-3815-2020-supplement

                      Author contributions Author contributions BLG contributed toconceptualisation data curation formal analysis investigationmethodology software and supervision validation visualisationwriting of the original draft writing and review and editing ATDcontributed to conceptualisation funding acquisition formal anal-ysis methodology project administration resources supervisionwriting and review and editing ADF contributed to formal analy-sis methodology resources writing and review and editing JPMcontributed to formal analysis methodology software writing andreview and editing AM contributed to project administration su-pervision writing and review and editing AMcM contributed tofunding acquisition project administration resources writing andreview and editing SWM contributed to conceptualisation fund-ing acquisition formal analysis writing and review and editing

                      Competing interests The authors declare that they have no conflictof interest

                      Acknowledgements Sampling on Astrolabe was supported bya FrenchndashAustralian research collaboration The Institut PolaireFranccedilais Paul-Eacutemile-Victor supported access to the ship and fieldoperations The biogeochemical data collection was coordinatedby Alain Poisson and Nicolas Metzl Sorbonne Universiteacute andBronte Tilbrook CSIRO Oceans and Atmosphere Steve Rintoul(CSIRO) and Rose Morrow (LEGOS) coordinated the collection ofsalinity and temperature data The Antarctic Climate and Ecosys-tems CRC and the Integrated Marine Observing System are thankedfor supporting the operation of sensors the collection of water sam-ples and nutrient analyses reported in this study Alan Poole MattSherlock John Akl Kate Berry Lesley Clementson Brian Grif-fiths (CSIRO) Rick van den Enden Rob Johnson (AAD) and themany dedicated volunteers and shipsrsquo officers and crew are thankedfor their important contributions to the field efforts and data man-agement We thank the University of Tasmania and the AustralianAntarctic Division for the space and resources needed to undertakethis work Thanks to Nathaniel Bindoff and Simon Wotherspoon fortheir consideration of parts of the paper Thanks are due to the re-viewer Damiano Righetti for the valuable input he provided in par-ticular for pointing out ambiguities and small errors and improvingthe clarity of the paper and an anonymous reviewer for the struc-tural and theoretical considerations Total chlorophyll data used inthis paper were produced with the Giovanni online data system de-veloped and maintained by the NASA GES DISC

                      Biogeosciences 17 3815ndash3835 2020 httpsdoiorg105194bg-17-3815-2020

                      B L Greaves et al SAM influences phytoplankton in SIZ 3831

                      Financial support This research has been supported by the Uni-versity of Tasmania (Institute of Marine and Antarctic Studies) bythe Australian Governmentrsquos Cooperative Research Centre programthrough the Antarctic Climate and Ecosystems CRC the AustralianAntarctic Division (projects 40 and 4107) and by the Australian Re-search Councilrsquos Special Research Initiative for Antarctic GatewayPartnership (project no SR140300001)

                      Review statement This paper was edited by Julia Uitz and re-viewed by Damiano Righetti and one anonymous referee

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                      Lovenduski N S Gruber N Doney S C and Lima I D En-hanced CO2 outgassing in the Southern Ocean from a positivephase of the Southern Annular Mode Global Biogeochem Cy21 1ndash14 httpsdoiorg1010292006GB002900 2007

                      Lovenduski N S and Gruber N Impact of the Southern AnnularMode on Southern Ocean circulation and biology Geophys ResLett 32 1ndash4 httpsdoiorg1010292005GL022727 2005

                      Mackas D L Does blending of chlorophylldata bias temporal trend Nature 472 E4ndashE5httpsdoiorg101038nature09951 2011

                      Mackintosh A N Anderson B M Lorrey A M Renwick JA Frei P and Dean S M Regional cooling caused recentNew Zealand glacier advances in a period of global warmingNat Commun 8 1ndash13 httpsdoiorg101038ncomms142022017

                      Marshall G J Trends in the Southern Annu-lar Mode from Observations and Reanalyses JClim 16 4134ndash4143 httpsdoiorg1011751520-0442(2003)016lt4134TITSAMgt20CO2 2003

                      Marshall G J Half-century seasonal relationships between theSouthern Annular mode and Antarctic temperatures Int J Cli-matol 27 373ndash383 httpsdoiorg101002joc1407 2007

                      Martin A McMinn A Heath M Hegseth E N and Ryan KG The physiological response to increased temperature in over-wintering sea ice algae and phytoplankton in McMurdo SoundAntarctica and Tromsoslash Sound Norway J Exp Mar Biol Ecol428 57ndash66 httpsdoiorg101016jjembe201206006 2012

                      Massom R A and Stammerjohn S E Antarctic sea ice changeand variability ndash Physical and ecological implications Polar Sci4 149ndash186 httpsdoiorg101016jpolar201005001 2010

                      McMinn A Ashworth C and Ryan K Growth and Productivityof Antarctic Sea Ice Algae under PAR and UV Irradiances BotMar 42 401ndash407 httpsdoiorg101515BOT1999046 1999

                      McMinn A and Martin A Dark survival in awarming world P Roy Soc B 280 20122909httpsdoiorg101098rspb20122909 2013

                      Meredith M P Murphy E J Hawker E J King JC and Wallace M I On the interannual variability ofocean temperatures around South Georgia Southern OceanForcing by El NintildeoSouthern Oscillation and the South-ern Annular Mode Deep-Sea Res Pt II 55 2007ndash2022httpsdoiorg101016jdsr2200805020 2008

                      Mo K C Relationships between low-frequency variability inthe Southern Hemisphere and sea surface temperature anoma-lies J Clim 13 3599ndash3610 httpsdoiorg1011751520-0442(2000)013lt3599rblfvigt20co2 2000

                      Moline M A Claustre H Frazer T K Schofield O andVernet M Alteration of the food web along the Antarc-tic Peninsula in response to a regional warming trend GlobChange Biol 10 1973ndash1980 httpsdoiorg101111j1365-2486200400825x 2004

                      Moore J K and Abbott M R Phytoplankton chloro-phyll distributions and primary production in the South-ern Ocean J Geophys Res-Ocean 105 28709ndash28722httpsdoiorg1010291999JC000043 2000

                      Nakagawa S A farewell to Bonferroni the problems of low sta-tistical power and publication bias Behav Ecol 15 1044ndash1045httpsdoiorg101093behecoarh107 2004

                      Nakagawa S and Cuthill I C Effect size confidence inter-val and statistical significance a practical guide for biolo-gists Biol Rev 82 591ndash605 httpsdoiorg101111j1469-185X200700027x 2007

                      Nehring S Establishment of thermophilic phytoplankton speciesin the North Sea biological indicators of climatic changesShort communication ICES J Mar Sci 55 818ndash823httpsdoiorg101006jmsc19980389 1998

                      NOAA Teleconnection Pattern Calculation ProceduresClimate Prediction Center Internet Team available athttpswwwcpcncepnoaagovproductsprecipCWlinkdaily_ao_indexhistorymethodshtmlvar (last access 15 June 2017)2005

                      NOAA NCEP-DOE Reanalysis 2 data provided by theNOAAOARESRL PSD Boulder Colorado USA available athttpswwwcpcncepnoaagovproductsprecipCWlinkENSOverfnewaaoshtml last access 25 June 2017

                      OBIS Ocean Biogeographic Information System Intergovernmen-tal Oceanographic Commission of UNESCO available at httpwwwiobisorg last access 18 February 2020

                      httpsdoiorg105194bg-17-3815-2020 Biogeosciences 17 3815ndash3835 2020

                      3834 B L Greaves et al SAM influences phytoplankton in SIZ

                      Ottersen G Planque B Belgrano A Post E ReidP C and Stenseth N C Ecological effects of theNorth Atlantic Oscillation Oecologia 128 1ndash14httpsdoiorg101007s004420100655 2001

                      Parkinson C L A 40-y record reveals gradual Antarctic sea iceincreases followed by decreases at rates far exceeding the ratesseen in the Arctic P Natl Acad Sci USA 116 14414ndash14423httpsdoiorg101073pnas1906556116 2019

                      R Core Team R A Language and Environment for Statistical Com-puting R Foundation for Statistical Computing Vienna Austria2016

                      Rigual-Hernaacutendez A S Trull T W Bray S G Closset Iand Armand L K Seasonal dynamics in diatom and par-ticulate export fluxes to the deep sea in the Australian sec-tor of the southern Antarctic Zone J Mar Syst 142 62ndash74httpsdoiorg101016jjmarsys201410002 2015

                      Roach L A Smith M M and Dean S M Quantify-ing growth of pancake sea ice floes using images fromdrifting buoys J Geophys Res-Ocean 123 2851ndash2866httpsdoiorg1010022017JC013693 2018

                      Rodgers J L and Nicewander W A Thirteen Ways toLook at the Correlation Coefficient Am Stat 42 59ndash66httpsdoiorg10108000031305198810475524 1988

                      Saenz B T and Arrigo K R Annual primary produc-tion in Antarctic sea ice during 2005-2006 from a sea icestate estimate J Geophys Res-Ocean 119 3645ndash3678httpsdoiorg1010022013JC009677 2014

                      Sarthou G Timmermans K R Blain S and Treacuteguer P Growthphysiology and fate of diatoms in the ocean a review J Sea Res53 25ndash42 httpsdoiorg101016jseares200401007 2005

                      Savidge G Priddle J Gilpin L C Bathmann U Murphy EJ Owens N J P Pollard R T Turner D R Veth C andBoyd P An assessment of the role of the marginal ice zone inthe carbon cycle of the Southern Ocean Antarct Sci 8 349ndash358 httpsdoiorg101017S0954102096000521 1996

                      Scheffers B R De Meester L Bridge T C L HoffmannA A Pandolfi J M Corlett R T Butchart S H MPearce-Kelly P Kovacs K M Dudgeon D Pacifici MRondinini C Foden W B Martin T G Mora C Bick-ford D and Watson J E M The broad footprint of climatechange from genes to biomes to people Science 354 aaf7671httpsdoiorg101126scienceaaf7671 2016

                      Schiermeier Q Atmospheric science fixing the sky Nature 460792ndash795 httpsdoiorg101038460792a 2009

                      Schluumlter L Lohbeck K T Gutowska M A Groumlger J P Riebe-sell U and Reusch T B H Adaptation of a globally importantcoccolithophore to ocean warming and acidification Nat ClimChange 4 1024ndash1030 httpsdoiorg101038nclimate23792014

                      Scott F J and Marchant H J (Eds) Antarctic marine protistsAustralian Biological Resources Study Canberra and HobartAustralia 541 pp httpsdoiorg101017s00322474052448192005

                      Sen Gupta A and England M H Coupled oceanndashatmospherendashiceresponse to variations in the Southern Annular Mode J Clim19 4457ndash4486 httpsdoiorg101175JCLI38431 2006

                      Smetacek V and Nicol S Polar ocean ecosys-tems in a changing world Nature 437 362ndash368httpsdoiorg101038nature04161 2005

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                      Solomon S Ivy D J Kinnison D Mills M J Neely R R andSchmidt A Emergence of healing in the Antarctic ozone layerScience 353 269ndash274 httpsdoiorg101126scienceaae00612016

                      Son S W Tandon N F Polvani L M and Waugh D W Ozonehole and Southern Hemisphere climate change Geophys ResLett 36 1ndash5 httpsdoiorg1010292009GL038671 2009

                      Soppa M Voumllker C and Bracher A Diatom Phenol-ogy in the Southern Ocean Mean Patterns Trends andthe Role of Climate Oscillations Remote Sens 8 1ndash7httpsdoiorg103390rs8050420 2016

                      Spreen G Kaleschke L and Heygster G Sea ice remote sensingusing AMSR-E 89-GHz channels J Geophys Res-Ocean 113C02S03 httpsdoiorg1010292005JC003384 2008

                      Squire V A Ocean wave interactions with sea icea reappraisal Annu Rev Fluid Mech 52 37ndash60httpsdoiorg101146annurev-fluid-010719-060301 2020

                      Steinacher M Joos F Froumllicher T L Bopp L Cadule PCocco V Doney S C Gehlen M Lindsay K Moore J KSchneider B and Segschneider J Projected 21st century de-crease in marine productivity a multi-model analysis Biogeo-sciences 7 979ndash1005 httpsdoiorg105194bg-7-979-20102010

                      Swart N C and Fyfe J C Observed and simulated changes inthe Southern Hemisphere surface westerly wind-stress GeophysRes Lett 39 1ndash6 httpsdoiorg1010292012GL0528102012

                      Swart N C Fyfe J C Gillett N and Marshall G J Compar-ing Trends in the Southern Annular Mode and Surface WesterlyJet J Clim 28 8840ndash8859 httpsdoiorg101175JCLI-D-15-03341 2015

                      Swiło M Majewski W Minzoni R T and Ander-son J B Diatom assemblages from coastal settingsof West Antarctica Mar Micropaleontol 125 95ndash109httpsdoiorg101016jmarmicro201604001 2016

                      Takahashi T Sutherland S C Wanninkhof R Sweeney CFeely R A Chipman D W Hales B Friederich G ChavezF Sabine C Watson A Bakker D C E Schuster U MetzlN Yoshikawa-Inoue H Ishii M Midorikawa T Nojiri YKoumlrtzinger A Steinhoff T Hoppema M Olafsson J Arnar-son T S Tilbrook B Johannessen T Olsen A Bellerby RWong C S Delille B Bates N R and de Baar H J W Cli-matological mean and decadal change in surface ocean pCO2and net seandashair CO2 flux over the global oceans Deep-Sea ResPt II 56 554ndash577 httpsdoiorg101016jdsr22008120092009

                      Taljaard J J Development Distribution and Move-ment of Cyclones and Anticyclones in the South-ern Hemisphere During the IGY J Appl Me-teorol 6 973ndash987 httpsdoiorg1011751520-0450(1967)006lt0973DDAMOCgt20CO2 1967

                      Taylor F and Sjunneskog C Postglacial marine diatom recordof the Palmer Deep Antarctic Peninsula (ODP Leg 178 Site1098) 2 Diatom assemblages Paleoceanography 17 1ndash12httpsdoiorg1010292000PA000564 2002

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                      B L Greaves et al SAM influences phytoplankton in SIZ 3835

                      Ter Braak C J and Verdonschot P F Canonical correspondenceanalysis and related multivariate methods in aquatic ecologyAquat Sci 57 255ndash289 httpsdoiorg101007BF008774301995

                      Thompson D W Lee S and Baldwin M P Atmospheric pro-cesses governing the northern hemisphere annular modeNorthAtlantic oscillation Geoph Monog Series 134 81ndash112 2003

                      Thompson D W Solomon S Kushner P J England M HGrise K M and Karoly D J Signatures of the Antarcticozone hole in Southern Hemisphere surface climate change NatGeosci 4 741ndash749 2011

                      Thompson D W J and Solomon S Interpretation of RecentSouthern Hemisphere Climate Change Science 296 895ndash899httpsdoiorg101126science1069270 2002

                      Tomas C R (Ed) Identifying marine phytoplankton Academicpress San Diego California 858 pp 1997

                      Turner J Bracegirdle T J Phillips T Marshall G J and Hosk-ing J S An initial assessment of Antarctic sea ice extent in theCMIP5 models J Clim 26 1473ndash1484 2013

                      Turner J Summerhayes C Sparrow M Mayewski P ConveyP di Prisco G Gutt J Hodgson D Speich S Worby TBo S and Klepikov A Antarctic climate change and the envi-ronment ndash 2015 update Antarctic Treaty Consultative MeetingSofia Bulgaria June 2015 IP 92 2015

                      Waters R L Van Den Enden R and Marchant H J Summer mi-crobial ecology off East Antarctica (80ndash150 E) protistan com-munity structure and bacterial abundance Deep-Sea Res Pt II47 2401ndash2435 httpsdoiorg101016S0967-0645(00)00030-8 2000

                      Webb T and Bryson R A Late-and postglacial climatic changein the northern Midwest USA quantitative estimates derivedfrom fossil pollen spectra by multivariate statistical analy-sis Quaternary Res 2 70ndash115 httpsdoiorg1010160033-5894(72)90005-1 1972

                      Whitaker D and Christman M clustsig Significant Cluster Anal-ysis R package version 11 2014

                      Wilson D L Smith Jr W O and Nelson D M Phytoplanktonbloom dynamics of the western Ross Sea ice edge ndash I Primaryproductivity and species-specific production Deep-Sea Res PtI 33 1375ndash1387 httpsdoiorg1010160198-0149(86)90041-5 1986

                      Wright S W van den Enden R L Pearce I David-son A T Scott F J and Westwood K J Phyto-plankton community structure and stocks in the SouthernOcean (30ndash80 E) determined by CHEMTAX analysis ofHPLC pigment signatures Deep-Sea Res Pt II 57 758ndash778httpsdoiorg101016jdsr2200906015 2010

                      httpsdoiorg105194bg-17-3815-2020 Biogeosciences 17 3815ndash3835 2020

                      • Abstract
                      • Introduction
                        • Importance of the SIZ phytoplankton bloom
                        • The Southern Annular Mode
                        • The hypothesis
                          • Methods
                            • Phytoplankton relative abundance
                            • Environmental covariates
                            • Statistical analysis
                              • Results
                                • The influence of the SAM on phytoplankton community composition
                                • Influence of the SAM on phytoplankton productivity
                                • Observed occurrence and abundance
                                  • Discussion
                                    • The SAM and phytoplankton community composition
                                    • Effect of the SAM on phytoplankton taxa
                                    • The effects of the SAM on productivity and biomass
                                    • Implications
                                      • Conclusions
                                      • Data availability
                                      • Supplement
                                      • Author contributions
                                      • Competing interests
                                      • Acknowledgements
                                      • Financial support
                                      • Review statement
                                      • References

                        3826 B L Greaves et al SAM influences phytoplankton in SIZ

                        Figure 6 (a) CAP analysis of phytoplankton community composition Dots represent individual samples with colours corresponding tosignificant clusters (Fig 6b) The 22 phytoplankton taxagroups are overlain as weighted averages of their sample scores (red abbreviationsafter Fig 2) with positions plotted with a 3-times-larger distance from the origin to more easily visualise their relationships with constrainingenvironmental variables Linear projections of the significant constraining environmental covariates appear as blue arrows the length andangle of which represent the magnitude and direction of influence of each variable on community composition The inset shows the taxalocated close to the origin diatoms fri and cyc collocating (b) Cluster analysis dendrogram of the 52 samples based on similarities inphytoplankton community structure using colour to show seven significantly different groups (numbered 1ndash7 solid lines α = 005) Samplelabels contain season and voyage (eg 0809v2b= austral springndashsummer over 2008ndash2009 voyage designation 2 sample b is the secondsample obtained from the SIZ during that voyage) SAMautumn value SAMprior value and the D value

                        sis of their within-season successional maturity (D) and theSAM (Fig 6b) and demonstrated that there were signifi-cant differences between the community composition of thesamples The group structure determined by cluster analy-sis was displayed in the CAP ordination (using colour) todemonstrate that samples that clustered together were indeedclose to one another in the two-dimensional (2D) ordina-tion (Fig 6a) with their positioning further indicating theinfluences of D and the SAM on cluster groupings This lentconfidence that the 2D ordination was a reasonable approx-imation to the full high-dimensional structure As we knewthe values for the environmental covariates for each sam-ple it was possible to determine the correlation between the2D CAP solution and each environmental covariate We dis-played these correlations as a projected vector (arrow) wheredirection indicates the sign and length indicates strengthThis showed samples in clusters 3 and 4 (Fig 6b) were com-monly associated with a more positive SAM while those inclusters 5 6 and 7 were commonly associated with morenegative SAM values Samples in clusters 2 and 5 were com-

                        monly collected earlier in the springndashsummer period (lowerD) while those in clusters 1 4 6 and 7 were commonly col-lected later (Fig 6)

                        Other considered environmental covariates that did notsignificantly influence community composition were thetime of the day that a sample was collected and the mini-mum latitude reached by sea ice cover in the previous winter(Supplement Table S1)

                        These analyses were also undertaken using phytoplanktonabsolute abundances rather than with relative abundances asreported above The analysis of absolute abundance showedsimilar temporal peaks in variance explained (SupplementFig S4) although it explained less variance (SAMautumn ex-plaining 109 SAMspring 91 and SAMprior 92 ) (Ta-ble S3) Individual taxa correlations with SAM indices (Ta-ble S4) showed a similar pattern to those estimated using rel-ative abundances (Table 2b)

                        Biogeosciences 17 3815ndash3835 2020 httpsdoiorg105194bg-17-3815-2020

                        B L Greaves et al SAM influences phytoplankton in SIZ 3827

                        32 Influence of the SAM on phytoplanktonproductivity

                        Two indicators of the influence of the SAM on phytoplank-ton productivity were obtained (i) the influence of the SAMon satellite-derived total chlorophyll and (ii) the influence ofthe SAM on macronutrient concentrations indicating nutri-ent drawdown associated with productivity Using the timesand locations of the 52 samples over the 11 years of ourstudy satellite-derived total chlorophyll showed positive cor-relation with all SAM indices r = 050 (p lt 0001) withSAMautumn r = 072 (p lt 0001) with SAMprior and r =069 (p lt 0001) with SAMspring (Table 2c) Peaks in thecorrelation of total chlorophyll with the SAM were evidentin the preceding autumn and spring and prior to sampling inresponse surfaces for NASA satellite total chlorophyll alongwith a peak in early winter (Fig S1) While further data arerequired to confirm this correlation the results obtained inthis study supported the presence of a positive relationshipbetween productivity and the SAM

                        The observed concentrations of the macronutrients NOx PO4 and SiO4 showed significant negative correlationswith SAMautumn (r =minus039 minus056 minus042 respectively Ta-ble 2d p 0005 lt 0001 0002 respectively) The concen-trations of these nutrients showed stronger negative correla-tions with SAMautumn when the 50 of samples collectedlatest in the springndashsummer season was considered (r =minus058 minus074 minus051 Table 2e p 0002 lt 0001 0008respectively) Macronutrient concentrations were unrelatedto either SAMprior or SAMspring (Table 2d) Peaks in neg-ative correlation of the SAM on [PO4] were evident in thepreceding autumn and spring prior to sampling in responsesurfaces with the peaks being more negative when only the50 of samples collected later in the springndashsummer wereconsidered (Fig S2) The concentrations of macronutrientsalso showed expected decline through the springndashsummercorrelations between [NOx] [PO4] and [SiO4] withD wereminus077minus073 andminus056 respectively (Table 2d p lt 0001lt 0001 lt 0001 respectively)

                        33 Observed occurrence and abundance

                        Abundance of individual taxa groups averaged 133 cells permillilitre and ranged to a maximum of 8796 cells per mL (Ta-ble 3) Individual cell volume ranged from 8 microm3 for the Par-males spp to gt 60 000 microm3 for the diatoms Dactyliosolenantarcticus and Thalassiothrix antarctica Average relativeabundance ranged from 02 for the diatom Fragilariopsisritscheri to 17 for the combined taxa group Fragilariop-sis cylindruscurta Of the 22 taxa groups resolved in thisstudy four taxa groups were identified in all 52 samples and11 taxa groups were identified in more than 90 of samples(Table 3)

                        4 Discussion

                        41 The SAM and phytoplankton communitycomposition

                        Our results show that the SAM shows a relationship withthe community composition of phytoplankton in the sea-sonal ice zone (SIZ) of the Southern Ocean (SO) This con-clusion was supported by a combination of three analyses(i) Permutation-based analyses of cluster structure demon-strated that the 52 samples were separable into seven statisti-cally different groups on the basis of community abundancecomposition of the 22 taxa groups (Fig 6b) and thus thatthere was variation between samples that might be explain-able with known environmental variables if clustering hadrevealed few or no clusters it would have been indicative oflevels of community variance (either high or low) unlikelyto be systematically explainable with the environmental vari-ables (ii) CAP analysis identified the SAM as a significantexplanatory variable on the structure of the phytoplanktoncommunity (Table 1b) and showed that groups identified incluster analysis were generally distinguished by the SAMand the D that a sample was collected (Fig 6) (iii) 15 ofthe 22 taxa groups resolved showed significant pairwise cor-relations (p lt 005) between relative abundance and at leastone of the three derived SAM indices (Table 2b)

                        The derived SAM index with greatest influence on phy-toplankton community composition SAMautumn (Figs 3 4)explained 126 of the variance of phytoplankton commu-nity composition in the optimum multi-variable CAP model(Table 1b) SAMautumn represented the average SAM aroundthe time that sea ice was extending northward through theSIZ (Fig 1a) At this time phytoplankton productivity inthe SIZ would have declined to around 30 of its mid-summer maximum (Moore and Abbott 2000 Arrigo et al2008 Constable et al 2014) and phytoplankton would bepreparing for winter by variously producing energy stor-age products producing resting spores or cysts reducingmetabolic rate and engaging in heterotrophic consumptionfor energy (Fryxell 1989 McMinn and Martin 2013) Theformation of sea ice reduces available light by as much as999 (McMinn et al 1999) severely limiting light forphytoplankton for around half of each year at the rangeof longitude sampled latitude 64 S was covered in seaice for half the time across the sampled years (Fig 1a)Windier conditions associated with a more positive SAM inautumn may delay the consolidation of sea ice into largerfloes (Roach et al 2018) extending the phytoplankton grow-ing season and possibly increasing the relative abundanceof taxa that occur later in the springndashsummer season Thequantity of phytoplankton that survive the Antarctic winteris extremely low (McMinn and Martin 2013) and the abun-dance of taxa present and their metabolic condition whenthe autumn sea ice forms may strongly influence their vi-ability relative vigour and availability to seed the subse-

                        httpsdoiorg105194bg-17-3815-2020 Biogeosciences 17 3815ndash3835 2020

                        3828 B L Greaves et al SAM influences phytoplankton in SIZ

                        quent post-winter bloom This possibility was supported bythe observation that the only two taxa groups observed tohave significantly (p lt 005) higher relative abundance laterin the springndashsummer the Chaetoceros species C dichaetaand C concavicorniscurvatus were both observed to alsoshow significantly higher relative abundances when the pre-ceding SAMautumn was more positive (Table 2b) Thus SAM-induced effects on phytoplankton in the autumn could wellinfluence the phytoplankton community structure in the fol-lowing post-winter productive season

                        Extending the springndashsummer productive season by de-laying the autumn consolidation of sea ice may result inmore prolonged declines in relative abundance of taxa thatare more prolific earlier in the springndashsummer and may thusreduce the population from which the following post-winterbloom is initiated Of the eight taxa groups showing sta-tistically higher relative abundance earlier in the springndashsummer (p lt 005) three showed corresponding statisticallylower relative abundances with higher preceding SAMautumn(Emiliana huxleyi Nitzschia acicularisdecipiens and Par-males spp p lt 005 Table 2b) supporting this conjec-ture Of the remaining five taxa groups of the eight fourshowed no detectable relationship with SAMautumn and one(Pseudonitzschia lineola) showed a positive relationship

                        Two other derived SAM indices were found to influencephytoplankton SAMspring and SAMprior These indices weredifficult to distinguish due to their largely overlapping timeperiods (Fig 4) and they were strongly correlated (r = 083p lt 005 Table 2c) with similar influence on taxonomicabundances (Table 2b) SAMprior was the preferred parame-ter for the multiparameter CAP model in which it explained43 of total variance Windier and stormier conditions as-sociated with a higher SAM in the months prior to sam-pling would increase nutrient input to the euphotic zone fromdeeper waters (Lovenduski and Gruber 2005) promotingproductivity whilst at the same time episodically dilutingsurface phytoplankton through deeper mixing More stormyconditions may also have brought about a faster break-upof winter sea ice promoting earlier spring phytoplanktongrowth Conversely windier conditions would also restrictstratification of the surface ocean precluding phytoplanktonbloom formation lessening productivity (Fitch and Moore2007) and reducing the abundance of early blooming taxaThis may explain the responses of Emiliania huxleyi and thecombined Nitzschia acicularisdecipiens group which bothshowed early maximum abundances (r =minus028 and minus047respectively with D p lt 005 Table 2b) and also nega-tive correlations with SAMspring and SAMprior (r =minus029to minus042 p lt 005 Table 2b) Five other taxa groups withearly maximum abundance (negative correlation with Dp lt 005) showed no detectable correlation with SAMspringand one (Pseudonitzschia lineola) showed a positive rela-tionship indicating that their abundances were determinedby environmental factors that prevail early in the season butnot those factors altered by variations in the SAM Histori-

                        cally the variance in the SAM is lower in the spring quar-ter than in other quarters (NOAA 2005) perhaps explainingwhy SAMspring and SAMprior explained less variance in com-munity composition than SAMautumn

                        We expected the SAM prior to sampling (SAMprior andSAMspring) would show a relationship with phytoplanktoncomposition and a lesser relationship of the SAM in thewinter is plausible because the surface of the ocean is in-sulated from atmospheric conditions by sea ice The relation-ship with the SAM the previous autumn was not expected butis also plausible as it coincides with the time when sea ice isforming and thus a critical time for phytoplankton preparingto hibernate the half-year of sea ice cover We also observeda similar relationship between SAMautumn and (i) NASAsatellite total chlorophyll and (ii) macronutrient concentra-tions across all samples as well as (iii) a stronger correla-tion with macronutrient concentrations when only the sam-ples collected in the latter half of the season were considered(Table 2c d and e respectively) We also observed maximain the autumn SAM relationship in response-surface analy-ses of the correlation between the SAM and (i) NASA satel-lite total chlorophyll and (ii) [PO4] in all samples as well as(iii) a stronger maxima with [PO4] when only the samplescollected later in the season were considered (Figs S1 andS2) Both total chlorophyll and [PO4] were observationallyindependent of the taxonomic cell counts and whilst [PO4]was estimated from parallel samples as the taxonomic analy-sis NASA satellite total chlorophyll had no material connec-tion with collected samples being linked only geographicallyand temporally and thus offers independent support for theunexpected observation that phytoplankton community com-position in the springndashsummer is related to the SAM in theprevious autumn The empirically defined SAMautumn alsoshowed significant (p lt 005) pairwise correlations with 12of the 22 taxa groups resolved (Table 2b)

                        42 Effect of the SAM on phytoplankton taxa

                        Nothing has been previously reported with respect to the cli-matic preferences of the majority of taxa identified in thisstudy and only 10 of the 22 taxa groups considered in ourresearch had data records in the Ocean Biogeographic In-formation System (OBIS 2020) Some of the observed taxahave been reported to show various relationships with en-vironmental factors including sea-surface temperature timethrough the season and latitude but often at the taxonomiclevel of genera rather than at a species level (Burckle et al1987 Chiba et al 2000 Waters et al 2000 Green and Sam-brotto 2006 Gomi et al 2007) We however observed dif-fering responses to environmental variables among closelyrelated taxa This was exemplified by the opposite correla-tions of Chaetoceros species C dicheata and C neglectuswith D (048 and minus070 respectively p lt 00025 Table 2b)and the opposite correlations of Fragilariopsis species Frhombica and F kerguelensis with SAMautumn (minus039 and

                        Biogeosciences 17 3815ndash3835 2020 httpsdoiorg105194bg-17-3815-2020

                        B L Greaves et al SAM influences phytoplankton in SIZ 3829

                        052 respectively p lt 005 Table 2b Fig 5a b) The strongand opposite response to these variables by species belong-ing to the same genus indicates the importance of species-level observation in detecting subtle changes in pelagic phy-toplankton communities

                        A third of analysed taxa comprising 7 taxa and 23 of all counted cells showed no detectable relationship withthe SAM This could be due to large errors associated withlow counts of rarer taxa because unaccounted variation wasmasking any relationship or because the taxa were insensi-tive to the SAM There is less chance of detecting relation-ships between taxa and environment variables when fewerindividuals are counted however some less represented taxadid show relationships with SAM indices (eg Emilianiahuxleyi |r|gt 038 Table 2b) Of the 22 taxa resolved 5showed no significant relationships with either the SAM orD All were comparatively scarce and together representedonly 2 of all cells counted Assessing species composi-tions across a greater fraction of each sample and thus count-ing more of the scarcer taxa may have revealed relationshipsbetween these rarer taxa and environmental variables (Nak-agawa and Cuthill 2007) Yet it remains possible that thesetaxa are actually unaffected by seasonal succession and theSAM instead responding to other environmental variablesthat were not measured as part of this study or that they re-main as persistent but relatively rare background taxa withrespect to the overall phytoplankton assemblage

                        This is the first study to show a link between variationin the SAM and the composition of phytoplankton commu-nities in the SO although similar findings have been re-ported for other major climatic phenomena in other partsof the globe The climatically similar Northern HemisphereAnnular Mode (NAM) causes increased westerly winds anddeeper mixed layers at middle to high northern latitudes inits positive phase (Nehring 1998 Thompson et al 2003Kahru et al 2011) The NAM has been related to the tim-ing abundance and biomass of phytoplankton taxa at highnorthern latitudes (Nehring 1998 Belgrano et al 1999 Ot-tersen et al 2001 Blenckner and Hillebrand 2002) andto the delayed occurrence of maximum chlorophyll in theNorth Atlantic Summer (Kahru et al 2011) Similarly theEl NintildeondashSouthern Oscillation (ENSO) equatorial mode hasbeen shown to influence the distribution and abundance ofphytoplankton in the tropical oceans (Blanchot et al 1992)

                        Phytoplankton are the pastures of the oceans and it is plau-sible that the climate in both autumn and spring influencethe phytoplankton community composition of phytoplank-ton and their ecological progression through the productivespringndashsummer period in the SIZ Climate change impactshave now been documented across every type of ecosystemon Earth (Scheffers et al 2016 Harris et al 2018) and thedistribution abundance phenology and productivity of phy-toplankton communities throughout the world are changingin response to warming acidifying and stratifying oceans(Hoegh-Guldberg and Bruno 2010) We have detected an

                        association between variation in phytoplankton communitycomposition and variation in the SAM over a relatively brief11-year monitoring period despite all the other environmen-tal factors that elicit variability in phytoplankton communi-ties in the SIZ of the SO

                        43 The effects of the SAM on productivity andbiomass

                        A positive SAM has previously been shown to be associ-ated with increased standing stocks and productivity of phy-toplankton in the SIZ of the SO (Arrigo et al 2008 Boyce etal 2010 Soppa et al 2016) In the SIZ above the AntarcticDivergence nutrients are replenished from the deeper oceanthrough the unproductive winter and the levels of nutritionremaining at the end of summer integrate the total draw-down of nutrients by phytoplankton production over the en-tire springndashsummer growing season (Arrigo et al 1999) Weobserved this nutrient drawdown through the springndashsummeras the negative correlation between all macronutrient con-centrations and D (Table 2d) We also observed a nega-tive relationship between all macronutrient concentrations inthe springndashsummer and the previous SAMautumn (Table 2dFig 5d) suggesting that an elevated SAM in autumn leadsto greater productivity and thus greater nutrient drawdownduring the following springndashsummer The nutrient concen-trations at the end of the springndashsummer productive seasonwould be expected to best represent the total productivityover the season we observed that the correlation between nu-trient concentrations and SAMautumn were higher when onlythe 50 of samples collected later in the springndashsummerwere considered (Table 2e) further supporting the conjec-ture that a higher SAM in the autumn is linked with greaterproductivity through the following springndashsummer

                        The observed positive relationship between total chloro-phyll and all the SAM indices (r = 05 to 072 p lt 00025Table 2c) and the presence of apparent spring and autumnmaxima in the response surfaces of the variance in totalchlorophyll explained by the SAM (Fig S1) further sup-port the conjecture that a more positive SAM is linked withgreater total chlorophyll and thus greater total productivityin the SIZ The total chlorophyll data considered were limitedto the 52 samples collected that is estimated for the timesand locations of each sample collection Estimates werecoarsely determined as interpolations of available monthlypredictions (Fig S3) and estimates could be thus obtainedfor only 49 of the 52 samples Yet there are indicators of re-liability in the sparse information the diatom Fragilariopsisrhombica is always relatively small (Table 3) and when therelative abundance of this taxon was high total chlorophyllwas lower (r =minus059 p lt 00025 Table 2b) and when therelative abundance of larger diatoms were high total chloro-phyll was also often high (eg Dactyliosolen antarcticusr = 037 p lt 005 Table 2b)

                        httpsdoiorg105194bg-17-3815-2020 Biogeosciences 17 3815ndash3835 2020

                        3830 B L Greaves et al SAM influences phytoplankton in SIZ

                        44 Implications

                        The SIZ is a productive region of the SO (Moore and Abbott2000) and changes to the SIZ phytoplankton communityhave potentially far-reaching implications for the ecosystemservices these organisms provide including carbon exportto the deep ocean and supporting the productivity of almostall Antarctic life Increases in the relative abundance of thelarger Chaetoceros spp diatoms would favour grazing bylarge metazooplankton especially krill (Boyd et al 1984Kawaguchi et al 1999 Moline et al 2004) which linkphytoplankton to whales seabirds seals and most higherAntarctic life forms (Smetacek 2008) Such changes wouldalso increase the efficiency of the biological pump as thelarger phytoplankton sink more rapidly than small phyto-plankton (Alldredge and Gotschalk 1989) and increasedgrazing by krill would reparcel some phytoplankton biomassinto faeces that would also sink more rapidly (Cadeacutee etal 1992) Such changes in carbon flux and trophodynam-ics would act as a negative feedback on climate change byspeeding the sequestration of carbon to the deep ocean

                        The SAM is predicted to become increasingly positivein the future (Arblaster and Meehl 2006 Swart and Fyfe2012 Gillett and Fyfe 2013 Abram et al 2014 Solomonet al 2016) Our results cannot necessarily be extrapolatedto infer changes that will likely occur as the SAM contin-ues to increase as evolutionary responses can partly miti-gate adverse effects on phytoplankton of longer-term climatechange and future changes in climate are likely to imposeother co-stressors on phytoplankton inhabiting these waters(Lohbeck et al 2014 Schluumlter et al 2014 Deppeler andDavidson 2017) Our study showed that some of the vari-ation in the phytoplankton composition in the seasonal icezone was significantly related to variation in the SAM andthat the sign and magnitude of the correlation with the SAMdiffered among species

                        5 Conclusions

                        Statistical analyses indicated that together the autumn andspring SAM explained a higher percentage (179 ) of thevariation in phytoplankton community composition than anyvariable mostly due to the autumn SAM (up to 133 ) Intotal this exceeded the variance explained by any other vari-able even that attributable to the time of the season thatthe sample was collected (154 ) or other critical phys-ical variables such as temperature salinity and latitudeFurthermore 15 of the 22 phytoplankton taxa identified inthis study showed significant correlation with the SAM andthere were indications that a more positive SAM was relatedto increased phytoplankton productivity in the SIZ Whilethis study was limited in both timespan (11 austral springndashsummers) and the overall variance in phytoplankton compo-sition explained by all the constraining variables (375 ) it

                        suggests that the phytoplankton of the SIZ are indeed sensi-tive to changes in the SAM and thus possibly responsive toclimate change

                        Data availability The dataset used in this paper is available athttpsdoiorg10261795d9181f7308bd (Greaves et al 2019)

                        Supplement The supplement related to this article is available on-line at httpsdoiorg105194bg-17-3815-2020-supplement

                        Author contributions Author contributions BLG contributed toconceptualisation data curation formal analysis investigationmethodology software and supervision validation visualisationwriting of the original draft writing and review and editing ATDcontributed to conceptualisation funding acquisition formal anal-ysis methodology project administration resources supervisionwriting and review and editing ADF contributed to formal analy-sis methodology resources writing and review and editing JPMcontributed to formal analysis methodology software writing andreview and editing AM contributed to project administration su-pervision writing and review and editing AMcM contributed tofunding acquisition project administration resources writing andreview and editing SWM contributed to conceptualisation fund-ing acquisition formal analysis writing and review and editing

                        Competing interests The authors declare that they have no conflictof interest

                        Acknowledgements Sampling on Astrolabe was supported bya FrenchndashAustralian research collaboration The Institut PolaireFranccedilais Paul-Eacutemile-Victor supported access to the ship and fieldoperations The biogeochemical data collection was coordinatedby Alain Poisson and Nicolas Metzl Sorbonne Universiteacute andBronte Tilbrook CSIRO Oceans and Atmosphere Steve Rintoul(CSIRO) and Rose Morrow (LEGOS) coordinated the collection ofsalinity and temperature data The Antarctic Climate and Ecosys-tems CRC and the Integrated Marine Observing System are thankedfor supporting the operation of sensors the collection of water sam-ples and nutrient analyses reported in this study Alan Poole MattSherlock John Akl Kate Berry Lesley Clementson Brian Grif-fiths (CSIRO) Rick van den Enden Rob Johnson (AAD) and themany dedicated volunteers and shipsrsquo officers and crew are thankedfor their important contributions to the field efforts and data man-agement We thank the University of Tasmania and the AustralianAntarctic Division for the space and resources needed to undertakethis work Thanks to Nathaniel Bindoff and Simon Wotherspoon fortheir consideration of parts of the paper Thanks are due to the re-viewer Damiano Righetti for the valuable input he provided in par-ticular for pointing out ambiguities and small errors and improvingthe clarity of the paper and an anonymous reviewer for the struc-tural and theoretical considerations Total chlorophyll data used inthis paper were produced with the Giovanni online data system de-veloped and maintained by the NASA GES DISC

                        Biogeosciences 17 3815ndash3835 2020 httpsdoiorg105194bg-17-3815-2020

                        B L Greaves et al SAM influences phytoplankton in SIZ 3831

                        Financial support This research has been supported by the Uni-versity of Tasmania (Institute of Marine and Antarctic Studies) bythe Australian Governmentrsquos Cooperative Research Centre programthrough the Antarctic Climate and Ecosystems CRC the AustralianAntarctic Division (projects 40 and 4107) and by the Australian Re-search Councilrsquos Special Research Initiative for Antarctic GatewayPartnership (project no SR140300001)

                        Review statement This paper was edited by Julia Uitz and re-viewed by Damiano Righetti and one anonymous referee

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                        Solomon S Ivy D J Kinnison D Mills M J Neely R R andSchmidt A Emergence of healing in the Antarctic ozone layerScience 353 269ndash274 httpsdoiorg101126scienceaae00612016

                        Son S W Tandon N F Polvani L M and Waugh D W Ozonehole and Southern Hemisphere climate change Geophys ResLett 36 1ndash5 httpsdoiorg1010292009GL038671 2009

                        Soppa M Voumllker C and Bracher A Diatom Phenol-ogy in the Southern Ocean Mean Patterns Trends andthe Role of Climate Oscillations Remote Sens 8 1ndash7httpsdoiorg103390rs8050420 2016

                        Spreen G Kaleschke L and Heygster G Sea ice remote sensingusing AMSR-E 89-GHz channels J Geophys Res-Ocean 113C02S03 httpsdoiorg1010292005JC003384 2008

                        Squire V A Ocean wave interactions with sea icea reappraisal Annu Rev Fluid Mech 52 37ndash60httpsdoiorg101146annurev-fluid-010719-060301 2020

                        Steinacher M Joos F Froumllicher T L Bopp L Cadule PCocco V Doney S C Gehlen M Lindsay K Moore J KSchneider B and Segschneider J Projected 21st century de-crease in marine productivity a multi-model analysis Biogeo-sciences 7 979ndash1005 httpsdoiorg105194bg-7-979-20102010

                        Swart N C and Fyfe J C Observed and simulated changes inthe Southern Hemisphere surface westerly wind-stress GeophysRes Lett 39 1ndash6 httpsdoiorg1010292012GL0528102012

                        Swart N C Fyfe J C Gillett N and Marshall G J Compar-ing Trends in the Southern Annular Mode and Surface WesterlyJet J Clim 28 8840ndash8859 httpsdoiorg101175JCLI-D-15-03341 2015

                        Swiło M Majewski W Minzoni R T and Ander-son J B Diatom assemblages from coastal settingsof West Antarctica Mar Micropaleontol 125 95ndash109httpsdoiorg101016jmarmicro201604001 2016

                        Takahashi T Sutherland S C Wanninkhof R Sweeney CFeely R A Chipman D W Hales B Friederich G ChavezF Sabine C Watson A Bakker D C E Schuster U MetzlN Yoshikawa-Inoue H Ishii M Midorikawa T Nojiri YKoumlrtzinger A Steinhoff T Hoppema M Olafsson J Arnar-son T S Tilbrook B Johannessen T Olsen A Bellerby RWong C S Delille B Bates N R and de Baar H J W Cli-matological mean and decadal change in surface ocean pCO2and net seandashair CO2 flux over the global oceans Deep-Sea ResPt II 56 554ndash577 httpsdoiorg101016jdsr22008120092009

                        Taljaard J J Development Distribution and Move-ment of Cyclones and Anticyclones in the South-ern Hemisphere During the IGY J Appl Me-teorol 6 973ndash987 httpsdoiorg1011751520-0450(1967)006lt0973DDAMOCgt20CO2 1967

                        Taylor F and Sjunneskog C Postglacial marine diatom recordof the Palmer Deep Antarctic Peninsula (ODP Leg 178 Site1098) 2 Diatom assemblages Paleoceanography 17 1ndash12httpsdoiorg1010292000PA000564 2002

                        Biogeosciences 17 3815ndash3835 2020 httpsdoiorg105194bg-17-3815-2020

                        B L Greaves et al SAM influences phytoplankton in SIZ 3835

                        Ter Braak C J and Verdonschot P F Canonical correspondenceanalysis and related multivariate methods in aquatic ecologyAquat Sci 57 255ndash289 httpsdoiorg101007BF008774301995

                        Thompson D W Lee S and Baldwin M P Atmospheric pro-cesses governing the northern hemisphere annular modeNorthAtlantic oscillation Geoph Monog Series 134 81ndash112 2003

                        Thompson D W Solomon S Kushner P J England M HGrise K M and Karoly D J Signatures of the Antarcticozone hole in Southern Hemisphere surface climate change NatGeosci 4 741ndash749 2011

                        Thompson D W J and Solomon S Interpretation of RecentSouthern Hemisphere Climate Change Science 296 895ndash899httpsdoiorg101126science1069270 2002

                        Tomas C R (Ed) Identifying marine phytoplankton Academicpress San Diego California 858 pp 1997

                        Turner J Bracegirdle T J Phillips T Marshall G J and Hosk-ing J S An initial assessment of Antarctic sea ice extent in theCMIP5 models J Clim 26 1473ndash1484 2013

                        Turner J Summerhayes C Sparrow M Mayewski P ConveyP di Prisco G Gutt J Hodgson D Speich S Worby TBo S and Klepikov A Antarctic climate change and the envi-ronment ndash 2015 update Antarctic Treaty Consultative MeetingSofia Bulgaria June 2015 IP 92 2015

                        Waters R L Van Den Enden R and Marchant H J Summer mi-crobial ecology off East Antarctica (80ndash150 E) protistan com-munity structure and bacterial abundance Deep-Sea Res Pt II47 2401ndash2435 httpsdoiorg101016S0967-0645(00)00030-8 2000

                        Webb T and Bryson R A Late-and postglacial climatic changein the northern Midwest USA quantitative estimates derivedfrom fossil pollen spectra by multivariate statistical analy-sis Quaternary Res 2 70ndash115 httpsdoiorg1010160033-5894(72)90005-1 1972

                        Whitaker D and Christman M clustsig Significant Cluster Anal-ysis R package version 11 2014

                        Wilson D L Smith Jr W O and Nelson D M Phytoplanktonbloom dynamics of the western Ross Sea ice edge ndash I Primaryproductivity and species-specific production Deep-Sea Res PtI 33 1375ndash1387 httpsdoiorg1010160198-0149(86)90041-5 1986

                        Wright S W van den Enden R L Pearce I David-son A T Scott F J and Westwood K J Phyto-plankton community structure and stocks in the SouthernOcean (30ndash80 E) determined by CHEMTAX analysis ofHPLC pigment signatures Deep-Sea Res Pt II 57 758ndash778httpsdoiorg101016jdsr2200906015 2010

                        httpsdoiorg105194bg-17-3815-2020 Biogeosciences 17 3815ndash3835 2020

                        • Abstract
                        • Introduction
                          • Importance of the SIZ phytoplankton bloom
                          • The Southern Annular Mode
                          • The hypothesis
                            • Methods
                              • Phytoplankton relative abundance
                              • Environmental covariates
                              • Statistical analysis
                                • Results
                                  • The influence of the SAM on phytoplankton community composition
                                  • Influence of the SAM on phytoplankton productivity
                                  • Observed occurrence and abundance
                                    • Discussion
                                      • The SAM and phytoplankton community composition
                                      • Effect of the SAM on phytoplankton taxa
                                      • The effects of the SAM on productivity and biomass
                                      • Implications
                                        • Conclusions
                                        • Data availability
                                        • Supplement
                                        • Author contributions
                                        • Competing interests
                                        • Acknowledgements
                                        • Financial support
                                        • Review statement
                                        • References

                          B L Greaves et al SAM influences phytoplankton in SIZ 3827

                          32 Influence of the SAM on phytoplanktonproductivity

                          Two indicators of the influence of the SAM on phytoplank-ton productivity were obtained (i) the influence of the SAMon satellite-derived total chlorophyll and (ii) the influence ofthe SAM on macronutrient concentrations indicating nutri-ent drawdown associated with productivity Using the timesand locations of the 52 samples over the 11 years of ourstudy satellite-derived total chlorophyll showed positive cor-relation with all SAM indices r = 050 (p lt 0001) withSAMautumn r = 072 (p lt 0001) with SAMprior and r =069 (p lt 0001) with SAMspring (Table 2c) Peaks in thecorrelation of total chlorophyll with the SAM were evidentin the preceding autumn and spring and prior to sampling inresponse surfaces for NASA satellite total chlorophyll alongwith a peak in early winter (Fig S1) While further data arerequired to confirm this correlation the results obtained inthis study supported the presence of a positive relationshipbetween productivity and the SAM

                          The observed concentrations of the macronutrients NOx PO4 and SiO4 showed significant negative correlationswith SAMautumn (r =minus039 minus056 minus042 respectively Ta-ble 2d p 0005 lt 0001 0002 respectively) The concen-trations of these nutrients showed stronger negative correla-tions with SAMautumn when the 50 of samples collectedlatest in the springndashsummer season was considered (r =minus058 minus074 minus051 Table 2e p 0002 lt 0001 0008respectively) Macronutrient concentrations were unrelatedto either SAMprior or SAMspring (Table 2d) Peaks in neg-ative correlation of the SAM on [PO4] were evident in thepreceding autumn and spring prior to sampling in responsesurfaces with the peaks being more negative when only the50 of samples collected later in the springndashsummer wereconsidered (Fig S2) The concentrations of macronutrientsalso showed expected decline through the springndashsummercorrelations between [NOx] [PO4] and [SiO4] withD wereminus077minus073 andminus056 respectively (Table 2d p lt 0001lt 0001 lt 0001 respectively)

                          33 Observed occurrence and abundance

                          Abundance of individual taxa groups averaged 133 cells permillilitre and ranged to a maximum of 8796 cells per mL (Ta-ble 3) Individual cell volume ranged from 8 microm3 for the Par-males spp to gt 60 000 microm3 for the diatoms Dactyliosolenantarcticus and Thalassiothrix antarctica Average relativeabundance ranged from 02 for the diatom Fragilariopsisritscheri to 17 for the combined taxa group Fragilariop-sis cylindruscurta Of the 22 taxa groups resolved in thisstudy four taxa groups were identified in all 52 samples and11 taxa groups were identified in more than 90 of samples(Table 3)

                          4 Discussion

                          41 The SAM and phytoplankton communitycomposition

                          Our results show that the SAM shows a relationship withthe community composition of phytoplankton in the sea-sonal ice zone (SIZ) of the Southern Ocean (SO) This con-clusion was supported by a combination of three analyses(i) Permutation-based analyses of cluster structure demon-strated that the 52 samples were separable into seven statisti-cally different groups on the basis of community abundancecomposition of the 22 taxa groups (Fig 6b) and thus thatthere was variation between samples that might be explain-able with known environmental variables if clustering hadrevealed few or no clusters it would have been indicative oflevels of community variance (either high or low) unlikelyto be systematically explainable with the environmental vari-ables (ii) CAP analysis identified the SAM as a significantexplanatory variable on the structure of the phytoplanktoncommunity (Table 1b) and showed that groups identified incluster analysis were generally distinguished by the SAMand the D that a sample was collected (Fig 6) (iii) 15 ofthe 22 taxa groups resolved showed significant pairwise cor-relations (p lt 005) between relative abundance and at leastone of the three derived SAM indices (Table 2b)

                          The derived SAM index with greatest influence on phy-toplankton community composition SAMautumn (Figs 3 4)explained 126 of the variance of phytoplankton commu-nity composition in the optimum multi-variable CAP model(Table 1b) SAMautumn represented the average SAM aroundthe time that sea ice was extending northward through theSIZ (Fig 1a) At this time phytoplankton productivity inthe SIZ would have declined to around 30 of its mid-summer maximum (Moore and Abbott 2000 Arrigo et al2008 Constable et al 2014) and phytoplankton would bepreparing for winter by variously producing energy stor-age products producing resting spores or cysts reducingmetabolic rate and engaging in heterotrophic consumptionfor energy (Fryxell 1989 McMinn and Martin 2013) Theformation of sea ice reduces available light by as much as999 (McMinn et al 1999) severely limiting light forphytoplankton for around half of each year at the rangeof longitude sampled latitude 64 S was covered in seaice for half the time across the sampled years (Fig 1a)Windier conditions associated with a more positive SAM inautumn may delay the consolidation of sea ice into largerfloes (Roach et al 2018) extending the phytoplankton grow-ing season and possibly increasing the relative abundanceof taxa that occur later in the springndashsummer season Thequantity of phytoplankton that survive the Antarctic winteris extremely low (McMinn and Martin 2013) and the abun-dance of taxa present and their metabolic condition whenthe autumn sea ice forms may strongly influence their vi-ability relative vigour and availability to seed the subse-

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                          3828 B L Greaves et al SAM influences phytoplankton in SIZ

                          quent post-winter bloom This possibility was supported bythe observation that the only two taxa groups observed tohave significantly (p lt 005) higher relative abundance laterin the springndashsummer the Chaetoceros species C dichaetaand C concavicorniscurvatus were both observed to alsoshow significantly higher relative abundances when the pre-ceding SAMautumn was more positive (Table 2b) Thus SAM-induced effects on phytoplankton in the autumn could wellinfluence the phytoplankton community structure in the fol-lowing post-winter productive season

                          Extending the springndashsummer productive season by de-laying the autumn consolidation of sea ice may result inmore prolonged declines in relative abundance of taxa thatare more prolific earlier in the springndashsummer and may thusreduce the population from which the following post-winterbloom is initiated Of the eight taxa groups showing sta-tistically higher relative abundance earlier in the springndashsummer (p lt 005) three showed corresponding statisticallylower relative abundances with higher preceding SAMautumn(Emiliana huxleyi Nitzschia acicularisdecipiens and Par-males spp p lt 005 Table 2b) supporting this conjec-ture Of the remaining five taxa groups of the eight fourshowed no detectable relationship with SAMautumn and one(Pseudonitzschia lineola) showed a positive relationship

                          Two other derived SAM indices were found to influencephytoplankton SAMspring and SAMprior These indices weredifficult to distinguish due to their largely overlapping timeperiods (Fig 4) and they were strongly correlated (r = 083p lt 005 Table 2c) with similar influence on taxonomicabundances (Table 2b) SAMprior was the preferred parame-ter for the multiparameter CAP model in which it explained43 of total variance Windier and stormier conditions as-sociated with a higher SAM in the months prior to sam-pling would increase nutrient input to the euphotic zone fromdeeper waters (Lovenduski and Gruber 2005) promotingproductivity whilst at the same time episodically dilutingsurface phytoplankton through deeper mixing More stormyconditions may also have brought about a faster break-upof winter sea ice promoting earlier spring phytoplanktongrowth Conversely windier conditions would also restrictstratification of the surface ocean precluding phytoplanktonbloom formation lessening productivity (Fitch and Moore2007) and reducing the abundance of early blooming taxaThis may explain the responses of Emiliania huxleyi and thecombined Nitzschia acicularisdecipiens group which bothshowed early maximum abundances (r =minus028 and minus047respectively with D p lt 005 Table 2b) and also nega-tive correlations with SAMspring and SAMprior (r =minus029to minus042 p lt 005 Table 2b) Five other taxa groups withearly maximum abundance (negative correlation with Dp lt 005) showed no detectable correlation with SAMspringand one (Pseudonitzschia lineola) showed a positive rela-tionship indicating that their abundances were determinedby environmental factors that prevail early in the season butnot those factors altered by variations in the SAM Histori-

                          cally the variance in the SAM is lower in the spring quar-ter than in other quarters (NOAA 2005) perhaps explainingwhy SAMspring and SAMprior explained less variance in com-munity composition than SAMautumn

                          We expected the SAM prior to sampling (SAMprior andSAMspring) would show a relationship with phytoplanktoncomposition and a lesser relationship of the SAM in thewinter is plausible because the surface of the ocean is in-sulated from atmospheric conditions by sea ice The relation-ship with the SAM the previous autumn was not expected butis also plausible as it coincides with the time when sea ice isforming and thus a critical time for phytoplankton preparingto hibernate the half-year of sea ice cover We also observeda similar relationship between SAMautumn and (i) NASAsatellite total chlorophyll and (ii) macronutrient concentra-tions across all samples as well as (iii) a stronger correla-tion with macronutrient concentrations when only the sam-ples collected in the latter half of the season were considered(Table 2c d and e respectively) We also observed maximain the autumn SAM relationship in response-surface analy-ses of the correlation between the SAM and (i) NASA satel-lite total chlorophyll and (ii) [PO4] in all samples as well as(iii) a stronger maxima with [PO4] when only the samplescollected later in the season were considered (Figs S1 andS2) Both total chlorophyll and [PO4] were observationallyindependent of the taxonomic cell counts and whilst [PO4]was estimated from parallel samples as the taxonomic analy-sis NASA satellite total chlorophyll had no material connec-tion with collected samples being linked only geographicallyand temporally and thus offers independent support for theunexpected observation that phytoplankton community com-position in the springndashsummer is related to the SAM in theprevious autumn The empirically defined SAMautumn alsoshowed significant (p lt 005) pairwise correlations with 12of the 22 taxa groups resolved (Table 2b)

                          42 Effect of the SAM on phytoplankton taxa

                          Nothing has been previously reported with respect to the cli-matic preferences of the majority of taxa identified in thisstudy and only 10 of the 22 taxa groups considered in ourresearch had data records in the Ocean Biogeographic In-formation System (OBIS 2020) Some of the observed taxahave been reported to show various relationships with en-vironmental factors including sea-surface temperature timethrough the season and latitude but often at the taxonomiclevel of genera rather than at a species level (Burckle et al1987 Chiba et al 2000 Waters et al 2000 Green and Sam-brotto 2006 Gomi et al 2007) We however observed dif-fering responses to environmental variables among closelyrelated taxa This was exemplified by the opposite correla-tions of Chaetoceros species C dicheata and C neglectuswith D (048 and minus070 respectively p lt 00025 Table 2b)and the opposite correlations of Fragilariopsis species Frhombica and F kerguelensis with SAMautumn (minus039 and

                          Biogeosciences 17 3815ndash3835 2020 httpsdoiorg105194bg-17-3815-2020

                          B L Greaves et al SAM influences phytoplankton in SIZ 3829

                          052 respectively p lt 005 Table 2b Fig 5a b) The strongand opposite response to these variables by species belong-ing to the same genus indicates the importance of species-level observation in detecting subtle changes in pelagic phy-toplankton communities

                          A third of analysed taxa comprising 7 taxa and 23 of all counted cells showed no detectable relationship withthe SAM This could be due to large errors associated withlow counts of rarer taxa because unaccounted variation wasmasking any relationship or because the taxa were insensi-tive to the SAM There is less chance of detecting relation-ships between taxa and environment variables when fewerindividuals are counted however some less represented taxadid show relationships with SAM indices (eg Emilianiahuxleyi |r|gt 038 Table 2b) Of the 22 taxa resolved 5showed no significant relationships with either the SAM orD All were comparatively scarce and together representedonly 2 of all cells counted Assessing species composi-tions across a greater fraction of each sample and thus count-ing more of the scarcer taxa may have revealed relationshipsbetween these rarer taxa and environmental variables (Nak-agawa and Cuthill 2007) Yet it remains possible that thesetaxa are actually unaffected by seasonal succession and theSAM instead responding to other environmental variablesthat were not measured as part of this study or that they re-main as persistent but relatively rare background taxa withrespect to the overall phytoplankton assemblage

                          This is the first study to show a link between variationin the SAM and the composition of phytoplankton commu-nities in the SO although similar findings have been re-ported for other major climatic phenomena in other partsof the globe The climatically similar Northern HemisphereAnnular Mode (NAM) causes increased westerly winds anddeeper mixed layers at middle to high northern latitudes inits positive phase (Nehring 1998 Thompson et al 2003Kahru et al 2011) The NAM has been related to the tim-ing abundance and biomass of phytoplankton taxa at highnorthern latitudes (Nehring 1998 Belgrano et al 1999 Ot-tersen et al 2001 Blenckner and Hillebrand 2002) andto the delayed occurrence of maximum chlorophyll in theNorth Atlantic Summer (Kahru et al 2011) Similarly theEl NintildeondashSouthern Oscillation (ENSO) equatorial mode hasbeen shown to influence the distribution and abundance ofphytoplankton in the tropical oceans (Blanchot et al 1992)

                          Phytoplankton are the pastures of the oceans and it is plau-sible that the climate in both autumn and spring influencethe phytoplankton community composition of phytoplank-ton and their ecological progression through the productivespringndashsummer period in the SIZ Climate change impactshave now been documented across every type of ecosystemon Earth (Scheffers et al 2016 Harris et al 2018) and thedistribution abundance phenology and productivity of phy-toplankton communities throughout the world are changingin response to warming acidifying and stratifying oceans(Hoegh-Guldberg and Bruno 2010) We have detected an

                          association between variation in phytoplankton communitycomposition and variation in the SAM over a relatively brief11-year monitoring period despite all the other environmen-tal factors that elicit variability in phytoplankton communi-ties in the SIZ of the SO

                          43 The effects of the SAM on productivity andbiomass

                          A positive SAM has previously been shown to be associ-ated with increased standing stocks and productivity of phy-toplankton in the SIZ of the SO (Arrigo et al 2008 Boyce etal 2010 Soppa et al 2016) In the SIZ above the AntarcticDivergence nutrients are replenished from the deeper oceanthrough the unproductive winter and the levels of nutritionremaining at the end of summer integrate the total draw-down of nutrients by phytoplankton production over the en-tire springndashsummer growing season (Arrigo et al 1999) Weobserved this nutrient drawdown through the springndashsummeras the negative correlation between all macronutrient con-centrations and D (Table 2d) We also observed a nega-tive relationship between all macronutrient concentrations inthe springndashsummer and the previous SAMautumn (Table 2dFig 5d) suggesting that an elevated SAM in autumn leadsto greater productivity and thus greater nutrient drawdownduring the following springndashsummer The nutrient concen-trations at the end of the springndashsummer productive seasonwould be expected to best represent the total productivityover the season we observed that the correlation between nu-trient concentrations and SAMautumn were higher when onlythe 50 of samples collected later in the springndashsummerwere considered (Table 2e) further supporting the conjec-ture that a higher SAM in the autumn is linked with greaterproductivity through the following springndashsummer

                          The observed positive relationship between total chloro-phyll and all the SAM indices (r = 05 to 072 p lt 00025Table 2c) and the presence of apparent spring and autumnmaxima in the response surfaces of the variance in totalchlorophyll explained by the SAM (Fig S1) further sup-port the conjecture that a more positive SAM is linked withgreater total chlorophyll and thus greater total productivityin the SIZ The total chlorophyll data considered were limitedto the 52 samples collected that is estimated for the timesand locations of each sample collection Estimates werecoarsely determined as interpolations of available monthlypredictions (Fig S3) and estimates could be thus obtainedfor only 49 of the 52 samples Yet there are indicators of re-liability in the sparse information the diatom Fragilariopsisrhombica is always relatively small (Table 3) and when therelative abundance of this taxon was high total chlorophyllwas lower (r =minus059 p lt 00025 Table 2b) and when therelative abundance of larger diatoms were high total chloro-phyll was also often high (eg Dactyliosolen antarcticusr = 037 p lt 005 Table 2b)

                          httpsdoiorg105194bg-17-3815-2020 Biogeosciences 17 3815ndash3835 2020

                          3830 B L Greaves et al SAM influences phytoplankton in SIZ

                          44 Implications

                          The SIZ is a productive region of the SO (Moore and Abbott2000) and changes to the SIZ phytoplankton communityhave potentially far-reaching implications for the ecosystemservices these organisms provide including carbon exportto the deep ocean and supporting the productivity of almostall Antarctic life Increases in the relative abundance of thelarger Chaetoceros spp diatoms would favour grazing bylarge metazooplankton especially krill (Boyd et al 1984Kawaguchi et al 1999 Moline et al 2004) which linkphytoplankton to whales seabirds seals and most higherAntarctic life forms (Smetacek 2008) Such changes wouldalso increase the efficiency of the biological pump as thelarger phytoplankton sink more rapidly than small phyto-plankton (Alldredge and Gotschalk 1989) and increasedgrazing by krill would reparcel some phytoplankton biomassinto faeces that would also sink more rapidly (Cadeacutee etal 1992) Such changes in carbon flux and trophodynam-ics would act as a negative feedback on climate change byspeeding the sequestration of carbon to the deep ocean

                          The SAM is predicted to become increasingly positivein the future (Arblaster and Meehl 2006 Swart and Fyfe2012 Gillett and Fyfe 2013 Abram et al 2014 Solomonet al 2016) Our results cannot necessarily be extrapolatedto infer changes that will likely occur as the SAM contin-ues to increase as evolutionary responses can partly miti-gate adverse effects on phytoplankton of longer-term climatechange and future changes in climate are likely to imposeother co-stressors on phytoplankton inhabiting these waters(Lohbeck et al 2014 Schluumlter et al 2014 Deppeler andDavidson 2017) Our study showed that some of the vari-ation in the phytoplankton composition in the seasonal icezone was significantly related to variation in the SAM andthat the sign and magnitude of the correlation with the SAMdiffered among species

                          5 Conclusions

                          Statistical analyses indicated that together the autumn andspring SAM explained a higher percentage (179 ) of thevariation in phytoplankton community composition than anyvariable mostly due to the autumn SAM (up to 133 ) Intotal this exceeded the variance explained by any other vari-able even that attributable to the time of the season thatthe sample was collected (154 ) or other critical phys-ical variables such as temperature salinity and latitudeFurthermore 15 of the 22 phytoplankton taxa identified inthis study showed significant correlation with the SAM andthere were indications that a more positive SAM was relatedto increased phytoplankton productivity in the SIZ Whilethis study was limited in both timespan (11 austral springndashsummers) and the overall variance in phytoplankton compo-sition explained by all the constraining variables (375 ) it

                          suggests that the phytoplankton of the SIZ are indeed sensi-tive to changes in the SAM and thus possibly responsive toclimate change

                          Data availability The dataset used in this paper is available athttpsdoiorg10261795d9181f7308bd (Greaves et al 2019)

                          Supplement The supplement related to this article is available on-line at httpsdoiorg105194bg-17-3815-2020-supplement

                          Author contributions Author contributions BLG contributed toconceptualisation data curation formal analysis investigationmethodology software and supervision validation visualisationwriting of the original draft writing and review and editing ATDcontributed to conceptualisation funding acquisition formal anal-ysis methodology project administration resources supervisionwriting and review and editing ADF contributed to formal analy-sis methodology resources writing and review and editing JPMcontributed to formal analysis methodology software writing andreview and editing AM contributed to project administration su-pervision writing and review and editing AMcM contributed tofunding acquisition project administration resources writing andreview and editing SWM contributed to conceptualisation fund-ing acquisition formal analysis writing and review and editing

                          Competing interests The authors declare that they have no conflictof interest

                          Acknowledgements Sampling on Astrolabe was supported bya FrenchndashAustralian research collaboration The Institut PolaireFranccedilais Paul-Eacutemile-Victor supported access to the ship and fieldoperations The biogeochemical data collection was coordinatedby Alain Poisson and Nicolas Metzl Sorbonne Universiteacute andBronte Tilbrook CSIRO Oceans and Atmosphere Steve Rintoul(CSIRO) and Rose Morrow (LEGOS) coordinated the collection ofsalinity and temperature data The Antarctic Climate and Ecosys-tems CRC and the Integrated Marine Observing System are thankedfor supporting the operation of sensors the collection of water sam-ples and nutrient analyses reported in this study Alan Poole MattSherlock John Akl Kate Berry Lesley Clementson Brian Grif-fiths (CSIRO) Rick van den Enden Rob Johnson (AAD) and themany dedicated volunteers and shipsrsquo officers and crew are thankedfor their important contributions to the field efforts and data man-agement We thank the University of Tasmania and the AustralianAntarctic Division for the space and resources needed to undertakethis work Thanks to Nathaniel Bindoff and Simon Wotherspoon fortheir consideration of parts of the paper Thanks are due to the re-viewer Damiano Righetti for the valuable input he provided in par-ticular for pointing out ambiguities and small errors and improvingthe clarity of the paper and an anonymous reviewer for the struc-tural and theoretical considerations Total chlorophyll data used inthis paper were produced with the Giovanni online data system de-veloped and maintained by the NASA GES DISC

                          Biogeosciences 17 3815ndash3835 2020 httpsdoiorg105194bg-17-3815-2020

                          B L Greaves et al SAM influences phytoplankton in SIZ 3831

                          Financial support This research has been supported by the Uni-versity of Tasmania (Institute of Marine and Antarctic Studies) bythe Australian Governmentrsquos Cooperative Research Centre programthrough the Antarctic Climate and Ecosystems CRC the AustralianAntarctic Division (projects 40 and 4107) and by the Australian Re-search Councilrsquos Special Research Initiative for Antarctic GatewayPartnership (project no SR140300001)

                          Review statement This paper was edited by Julia Uitz and re-viewed by Damiano Righetti and one anonymous referee

                          References

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                          Blenckner T and Hillebrand H North Atlantic Oscillation sig-natures in aquatic and terrestrial ecosystems ndash A meta-analysisGlob Change Biol 8 203ndash212 httpsdoiorg101046j1365-2486200200469x 2002

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                          Harris R M B Beaumont L J Vance T R Tozer C R Re-menyi T A Perkins-Kirkpatrick S E Mitchell PJ NicotraAB McGregor S Andrew NR Letnic M Kearney M RWernberg T Hutley L B Chambers L E Fletcher M-SKeatley M R Woodward C A Williamson G Duke N Cand Bowman D M J S Biological responses to the press andpulse of climate trends and extreme events Nat Clim Change8 579ndash587 httpsdoiorg101038s41558-018-0187-9 2018

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                          Lovenduski N S Gruber N Doney S C and Lima I D En-hanced CO2 outgassing in the Southern Ocean from a positivephase of the Southern Annular Mode Global Biogeochem Cy21 1ndash14 httpsdoiorg1010292006GB002900 2007

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                          3834 B L Greaves et al SAM influences phytoplankton in SIZ

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                          Son S W Tandon N F Polvani L M and Waugh D W Ozonehole and Southern Hemisphere climate change Geophys ResLett 36 1ndash5 httpsdoiorg1010292009GL038671 2009

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                          Swart N C Fyfe J C Gillett N and Marshall G J Compar-ing Trends in the Southern Annular Mode and Surface WesterlyJet J Clim 28 8840ndash8859 httpsdoiorg101175JCLI-D-15-03341 2015

                          Swiło M Majewski W Minzoni R T and Ander-son J B Diatom assemblages from coastal settingsof West Antarctica Mar Micropaleontol 125 95ndash109httpsdoiorg101016jmarmicro201604001 2016

                          Takahashi T Sutherland S C Wanninkhof R Sweeney CFeely R A Chipman D W Hales B Friederich G ChavezF Sabine C Watson A Bakker D C E Schuster U MetzlN Yoshikawa-Inoue H Ishii M Midorikawa T Nojiri YKoumlrtzinger A Steinhoff T Hoppema M Olafsson J Arnar-son T S Tilbrook B Johannessen T Olsen A Bellerby RWong C S Delille B Bates N R and de Baar H J W Cli-matological mean and decadal change in surface ocean pCO2and net seandashair CO2 flux over the global oceans Deep-Sea ResPt II 56 554ndash577 httpsdoiorg101016jdsr22008120092009

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                          Thompson D W J and Solomon S Interpretation of RecentSouthern Hemisphere Climate Change Science 296 895ndash899httpsdoiorg101126science1069270 2002

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                          Wright S W van den Enden R L Pearce I David-son A T Scott F J and Westwood K J Phyto-plankton community structure and stocks in the SouthernOcean (30ndash80 E) determined by CHEMTAX analysis ofHPLC pigment signatures Deep-Sea Res Pt II 57 758ndash778httpsdoiorg101016jdsr2200906015 2010

                          httpsdoiorg105194bg-17-3815-2020 Biogeosciences 17 3815ndash3835 2020

                          • Abstract
                          • Introduction
                            • Importance of the SIZ phytoplankton bloom
                            • The Southern Annular Mode
                            • The hypothesis
                              • Methods
                                • Phytoplankton relative abundance
                                • Environmental covariates
                                • Statistical analysis
                                  • Results
                                    • The influence of the SAM on phytoplankton community composition
                                    • Influence of the SAM on phytoplankton productivity
                                    • Observed occurrence and abundance
                                      • Discussion
                                        • The SAM and phytoplankton community composition
                                        • Effect of the SAM on phytoplankton taxa
                                        • The effects of the SAM on productivity and biomass
                                        • Implications
                                          • Conclusions
                                          • Data availability
                                          • Supplement
                                          • Author contributions
                                          • Competing interests
                                          • Acknowledgements
                                          • Financial support
                                          • Review statement
                                          • References

                            3828 B L Greaves et al SAM influences phytoplankton in SIZ

                            quent post-winter bloom This possibility was supported bythe observation that the only two taxa groups observed tohave significantly (p lt 005) higher relative abundance laterin the springndashsummer the Chaetoceros species C dichaetaand C concavicorniscurvatus were both observed to alsoshow significantly higher relative abundances when the pre-ceding SAMautumn was more positive (Table 2b) Thus SAM-induced effects on phytoplankton in the autumn could wellinfluence the phytoplankton community structure in the fol-lowing post-winter productive season

                            Extending the springndashsummer productive season by de-laying the autumn consolidation of sea ice may result inmore prolonged declines in relative abundance of taxa thatare more prolific earlier in the springndashsummer and may thusreduce the population from which the following post-winterbloom is initiated Of the eight taxa groups showing sta-tistically higher relative abundance earlier in the springndashsummer (p lt 005) three showed corresponding statisticallylower relative abundances with higher preceding SAMautumn(Emiliana huxleyi Nitzschia acicularisdecipiens and Par-males spp p lt 005 Table 2b) supporting this conjec-ture Of the remaining five taxa groups of the eight fourshowed no detectable relationship with SAMautumn and one(Pseudonitzschia lineola) showed a positive relationship

                            Two other derived SAM indices were found to influencephytoplankton SAMspring and SAMprior These indices weredifficult to distinguish due to their largely overlapping timeperiods (Fig 4) and they were strongly correlated (r = 083p lt 005 Table 2c) with similar influence on taxonomicabundances (Table 2b) SAMprior was the preferred parame-ter for the multiparameter CAP model in which it explained43 of total variance Windier and stormier conditions as-sociated with a higher SAM in the months prior to sam-pling would increase nutrient input to the euphotic zone fromdeeper waters (Lovenduski and Gruber 2005) promotingproductivity whilst at the same time episodically dilutingsurface phytoplankton through deeper mixing More stormyconditions may also have brought about a faster break-upof winter sea ice promoting earlier spring phytoplanktongrowth Conversely windier conditions would also restrictstratification of the surface ocean precluding phytoplanktonbloom formation lessening productivity (Fitch and Moore2007) and reducing the abundance of early blooming taxaThis may explain the responses of Emiliania huxleyi and thecombined Nitzschia acicularisdecipiens group which bothshowed early maximum abundances (r =minus028 and minus047respectively with D p lt 005 Table 2b) and also nega-tive correlations with SAMspring and SAMprior (r =minus029to minus042 p lt 005 Table 2b) Five other taxa groups withearly maximum abundance (negative correlation with Dp lt 005) showed no detectable correlation with SAMspringand one (Pseudonitzschia lineola) showed a positive rela-tionship indicating that their abundances were determinedby environmental factors that prevail early in the season butnot those factors altered by variations in the SAM Histori-

                            cally the variance in the SAM is lower in the spring quar-ter than in other quarters (NOAA 2005) perhaps explainingwhy SAMspring and SAMprior explained less variance in com-munity composition than SAMautumn

                            We expected the SAM prior to sampling (SAMprior andSAMspring) would show a relationship with phytoplanktoncomposition and a lesser relationship of the SAM in thewinter is plausible because the surface of the ocean is in-sulated from atmospheric conditions by sea ice The relation-ship with the SAM the previous autumn was not expected butis also plausible as it coincides with the time when sea ice isforming and thus a critical time for phytoplankton preparingto hibernate the half-year of sea ice cover We also observeda similar relationship between SAMautumn and (i) NASAsatellite total chlorophyll and (ii) macronutrient concentra-tions across all samples as well as (iii) a stronger correla-tion with macronutrient concentrations when only the sam-ples collected in the latter half of the season were considered(Table 2c d and e respectively) We also observed maximain the autumn SAM relationship in response-surface analy-ses of the correlation between the SAM and (i) NASA satel-lite total chlorophyll and (ii) [PO4] in all samples as well as(iii) a stronger maxima with [PO4] when only the samplescollected later in the season were considered (Figs S1 andS2) Both total chlorophyll and [PO4] were observationallyindependent of the taxonomic cell counts and whilst [PO4]was estimated from parallel samples as the taxonomic analy-sis NASA satellite total chlorophyll had no material connec-tion with collected samples being linked only geographicallyand temporally and thus offers independent support for theunexpected observation that phytoplankton community com-position in the springndashsummer is related to the SAM in theprevious autumn The empirically defined SAMautumn alsoshowed significant (p lt 005) pairwise correlations with 12of the 22 taxa groups resolved (Table 2b)

                            42 Effect of the SAM on phytoplankton taxa

                            Nothing has been previously reported with respect to the cli-matic preferences of the majority of taxa identified in thisstudy and only 10 of the 22 taxa groups considered in ourresearch had data records in the Ocean Biogeographic In-formation System (OBIS 2020) Some of the observed taxahave been reported to show various relationships with en-vironmental factors including sea-surface temperature timethrough the season and latitude but often at the taxonomiclevel of genera rather than at a species level (Burckle et al1987 Chiba et al 2000 Waters et al 2000 Green and Sam-brotto 2006 Gomi et al 2007) We however observed dif-fering responses to environmental variables among closelyrelated taxa This was exemplified by the opposite correla-tions of Chaetoceros species C dicheata and C neglectuswith D (048 and minus070 respectively p lt 00025 Table 2b)and the opposite correlations of Fragilariopsis species Frhombica and F kerguelensis with SAMautumn (minus039 and

                            Biogeosciences 17 3815ndash3835 2020 httpsdoiorg105194bg-17-3815-2020

                            B L Greaves et al SAM influences phytoplankton in SIZ 3829

                            052 respectively p lt 005 Table 2b Fig 5a b) The strongand opposite response to these variables by species belong-ing to the same genus indicates the importance of species-level observation in detecting subtle changes in pelagic phy-toplankton communities

                            A third of analysed taxa comprising 7 taxa and 23 of all counted cells showed no detectable relationship withthe SAM This could be due to large errors associated withlow counts of rarer taxa because unaccounted variation wasmasking any relationship or because the taxa were insensi-tive to the SAM There is less chance of detecting relation-ships between taxa and environment variables when fewerindividuals are counted however some less represented taxadid show relationships with SAM indices (eg Emilianiahuxleyi |r|gt 038 Table 2b) Of the 22 taxa resolved 5showed no significant relationships with either the SAM orD All were comparatively scarce and together representedonly 2 of all cells counted Assessing species composi-tions across a greater fraction of each sample and thus count-ing more of the scarcer taxa may have revealed relationshipsbetween these rarer taxa and environmental variables (Nak-agawa and Cuthill 2007) Yet it remains possible that thesetaxa are actually unaffected by seasonal succession and theSAM instead responding to other environmental variablesthat were not measured as part of this study or that they re-main as persistent but relatively rare background taxa withrespect to the overall phytoplankton assemblage

                            This is the first study to show a link between variationin the SAM and the composition of phytoplankton commu-nities in the SO although similar findings have been re-ported for other major climatic phenomena in other partsof the globe The climatically similar Northern HemisphereAnnular Mode (NAM) causes increased westerly winds anddeeper mixed layers at middle to high northern latitudes inits positive phase (Nehring 1998 Thompson et al 2003Kahru et al 2011) The NAM has been related to the tim-ing abundance and biomass of phytoplankton taxa at highnorthern latitudes (Nehring 1998 Belgrano et al 1999 Ot-tersen et al 2001 Blenckner and Hillebrand 2002) andto the delayed occurrence of maximum chlorophyll in theNorth Atlantic Summer (Kahru et al 2011) Similarly theEl NintildeondashSouthern Oscillation (ENSO) equatorial mode hasbeen shown to influence the distribution and abundance ofphytoplankton in the tropical oceans (Blanchot et al 1992)

                            Phytoplankton are the pastures of the oceans and it is plau-sible that the climate in both autumn and spring influencethe phytoplankton community composition of phytoplank-ton and their ecological progression through the productivespringndashsummer period in the SIZ Climate change impactshave now been documented across every type of ecosystemon Earth (Scheffers et al 2016 Harris et al 2018) and thedistribution abundance phenology and productivity of phy-toplankton communities throughout the world are changingin response to warming acidifying and stratifying oceans(Hoegh-Guldberg and Bruno 2010) We have detected an

                            association between variation in phytoplankton communitycomposition and variation in the SAM over a relatively brief11-year monitoring period despite all the other environmen-tal factors that elicit variability in phytoplankton communi-ties in the SIZ of the SO

                            43 The effects of the SAM on productivity andbiomass

                            A positive SAM has previously been shown to be associ-ated with increased standing stocks and productivity of phy-toplankton in the SIZ of the SO (Arrigo et al 2008 Boyce etal 2010 Soppa et al 2016) In the SIZ above the AntarcticDivergence nutrients are replenished from the deeper oceanthrough the unproductive winter and the levels of nutritionremaining at the end of summer integrate the total draw-down of nutrients by phytoplankton production over the en-tire springndashsummer growing season (Arrigo et al 1999) Weobserved this nutrient drawdown through the springndashsummeras the negative correlation between all macronutrient con-centrations and D (Table 2d) We also observed a nega-tive relationship between all macronutrient concentrations inthe springndashsummer and the previous SAMautumn (Table 2dFig 5d) suggesting that an elevated SAM in autumn leadsto greater productivity and thus greater nutrient drawdownduring the following springndashsummer The nutrient concen-trations at the end of the springndashsummer productive seasonwould be expected to best represent the total productivityover the season we observed that the correlation between nu-trient concentrations and SAMautumn were higher when onlythe 50 of samples collected later in the springndashsummerwere considered (Table 2e) further supporting the conjec-ture that a higher SAM in the autumn is linked with greaterproductivity through the following springndashsummer

                            The observed positive relationship between total chloro-phyll and all the SAM indices (r = 05 to 072 p lt 00025Table 2c) and the presence of apparent spring and autumnmaxima in the response surfaces of the variance in totalchlorophyll explained by the SAM (Fig S1) further sup-port the conjecture that a more positive SAM is linked withgreater total chlorophyll and thus greater total productivityin the SIZ The total chlorophyll data considered were limitedto the 52 samples collected that is estimated for the timesand locations of each sample collection Estimates werecoarsely determined as interpolations of available monthlypredictions (Fig S3) and estimates could be thus obtainedfor only 49 of the 52 samples Yet there are indicators of re-liability in the sparse information the diatom Fragilariopsisrhombica is always relatively small (Table 3) and when therelative abundance of this taxon was high total chlorophyllwas lower (r =minus059 p lt 00025 Table 2b) and when therelative abundance of larger diatoms were high total chloro-phyll was also often high (eg Dactyliosolen antarcticusr = 037 p lt 005 Table 2b)

                            httpsdoiorg105194bg-17-3815-2020 Biogeosciences 17 3815ndash3835 2020

                            3830 B L Greaves et al SAM influences phytoplankton in SIZ

                            44 Implications

                            The SIZ is a productive region of the SO (Moore and Abbott2000) and changes to the SIZ phytoplankton communityhave potentially far-reaching implications for the ecosystemservices these organisms provide including carbon exportto the deep ocean and supporting the productivity of almostall Antarctic life Increases in the relative abundance of thelarger Chaetoceros spp diatoms would favour grazing bylarge metazooplankton especially krill (Boyd et al 1984Kawaguchi et al 1999 Moline et al 2004) which linkphytoplankton to whales seabirds seals and most higherAntarctic life forms (Smetacek 2008) Such changes wouldalso increase the efficiency of the biological pump as thelarger phytoplankton sink more rapidly than small phyto-plankton (Alldredge and Gotschalk 1989) and increasedgrazing by krill would reparcel some phytoplankton biomassinto faeces that would also sink more rapidly (Cadeacutee etal 1992) Such changes in carbon flux and trophodynam-ics would act as a negative feedback on climate change byspeeding the sequestration of carbon to the deep ocean

                            The SAM is predicted to become increasingly positivein the future (Arblaster and Meehl 2006 Swart and Fyfe2012 Gillett and Fyfe 2013 Abram et al 2014 Solomonet al 2016) Our results cannot necessarily be extrapolatedto infer changes that will likely occur as the SAM contin-ues to increase as evolutionary responses can partly miti-gate adverse effects on phytoplankton of longer-term climatechange and future changes in climate are likely to imposeother co-stressors on phytoplankton inhabiting these waters(Lohbeck et al 2014 Schluumlter et al 2014 Deppeler andDavidson 2017) Our study showed that some of the vari-ation in the phytoplankton composition in the seasonal icezone was significantly related to variation in the SAM andthat the sign and magnitude of the correlation with the SAMdiffered among species

                            5 Conclusions

                            Statistical analyses indicated that together the autumn andspring SAM explained a higher percentage (179 ) of thevariation in phytoplankton community composition than anyvariable mostly due to the autumn SAM (up to 133 ) Intotal this exceeded the variance explained by any other vari-able even that attributable to the time of the season thatthe sample was collected (154 ) or other critical phys-ical variables such as temperature salinity and latitudeFurthermore 15 of the 22 phytoplankton taxa identified inthis study showed significant correlation with the SAM andthere were indications that a more positive SAM was relatedto increased phytoplankton productivity in the SIZ Whilethis study was limited in both timespan (11 austral springndashsummers) and the overall variance in phytoplankton compo-sition explained by all the constraining variables (375 ) it

                            suggests that the phytoplankton of the SIZ are indeed sensi-tive to changes in the SAM and thus possibly responsive toclimate change

                            Data availability The dataset used in this paper is available athttpsdoiorg10261795d9181f7308bd (Greaves et al 2019)

                            Supplement The supplement related to this article is available on-line at httpsdoiorg105194bg-17-3815-2020-supplement

                            Author contributions Author contributions BLG contributed toconceptualisation data curation formal analysis investigationmethodology software and supervision validation visualisationwriting of the original draft writing and review and editing ATDcontributed to conceptualisation funding acquisition formal anal-ysis methodology project administration resources supervisionwriting and review and editing ADF contributed to formal analy-sis methodology resources writing and review and editing JPMcontributed to formal analysis methodology software writing andreview and editing AM contributed to project administration su-pervision writing and review and editing AMcM contributed tofunding acquisition project administration resources writing andreview and editing SWM contributed to conceptualisation fund-ing acquisition formal analysis writing and review and editing

                            Competing interests The authors declare that they have no conflictof interest

                            Acknowledgements Sampling on Astrolabe was supported bya FrenchndashAustralian research collaboration The Institut PolaireFranccedilais Paul-Eacutemile-Victor supported access to the ship and fieldoperations The biogeochemical data collection was coordinatedby Alain Poisson and Nicolas Metzl Sorbonne Universiteacute andBronte Tilbrook CSIRO Oceans and Atmosphere Steve Rintoul(CSIRO) and Rose Morrow (LEGOS) coordinated the collection ofsalinity and temperature data The Antarctic Climate and Ecosys-tems CRC and the Integrated Marine Observing System are thankedfor supporting the operation of sensors the collection of water sam-ples and nutrient analyses reported in this study Alan Poole MattSherlock John Akl Kate Berry Lesley Clementson Brian Grif-fiths (CSIRO) Rick van den Enden Rob Johnson (AAD) and themany dedicated volunteers and shipsrsquo officers and crew are thankedfor their important contributions to the field efforts and data man-agement We thank the University of Tasmania and the AustralianAntarctic Division for the space and resources needed to undertakethis work Thanks to Nathaniel Bindoff and Simon Wotherspoon fortheir consideration of parts of the paper Thanks are due to the re-viewer Damiano Righetti for the valuable input he provided in par-ticular for pointing out ambiguities and small errors and improvingthe clarity of the paper and an anonymous reviewer for the struc-tural and theoretical considerations Total chlorophyll data used inthis paper were produced with the Giovanni online data system de-veloped and maintained by the NASA GES DISC

                            Biogeosciences 17 3815ndash3835 2020 httpsdoiorg105194bg-17-3815-2020

                            B L Greaves et al SAM influences phytoplankton in SIZ 3831

                            Financial support This research has been supported by the Uni-versity of Tasmania (Institute of Marine and Antarctic Studies) bythe Australian Governmentrsquos Cooperative Research Centre programthrough the Antarctic Climate and Ecosystems CRC the AustralianAntarctic Division (projects 40 and 4107) and by the Australian Re-search Councilrsquos Special Research Initiative for Antarctic GatewayPartnership (project no SR140300001)

                            Review statement This paper was edited by Julia Uitz and re-viewed by Damiano Righetti and one anonymous referee

                            References

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                            McMinn A Ashworth C and Ryan K Growth and Productivityof Antarctic Sea Ice Algae under PAR and UV Irradiances BotMar 42 401ndash407 httpsdoiorg101515BOT1999046 1999

                            McMinn A and Martin A Dark survival in awarming world P Roy Soc B 280 20122909httpsdoiorg101098rspb20122909 2013

                            Meredith M P Murphy E J Hawker E J King JC and Wallace M I On the interannual variability ofocean temperatures around South Georgia Southern OceanForcing by El NintildeoSouthern Oscillation and the South-ern Annular Mode Deep-Sea Res Pt II 55 2007ndash2022httpsdoiorg101016jdsr2200805020 2008

                            Mo K C Relationships between low-frequency variability inthe Southern Hemisphere and sea surface temperature anoma-lies J Clim 13 3599ndash3610 httpsdoiorg1011751520-0442(2000)013lt3599rblfvigt20co2 2000

                            Moline M A Claustre H Frazer T K Schofield O andVernet M Alteration of the food web along the Antarc-tic Peninsula in response to a regional warming trend GlobChange Biol 10 1973ndash1980 httpsdoiorg101111j1365-2486200400825x 2004

                            Moore J K and Abbott M R Phytoplankton chloro-phyll distributions and primary production in the South-ern Ocean J Geophys Res-Ocean 105 28709ndash28722httpsdoiorg1010291999JC000043 2000

                            Nakagawa S A farewell to Bonferroni the problems of low sta-tistical power and publication bias Behav Ecol 15 1044ndash1045httpsdoiorg101093behecoarh107 2004

                            Nakagawa S and Cuthill I C Effect size confidence inter-val and statistical significance a practical guide for biolo-gists Biol Rev 82 591ndash605 httpsdoiorg101111j1469-185X200700027x 2007

                            Nehring S Establishment of thermophilic phytoplankton speciesin the North Sea biological indicators of climatic changesShort communication ICES J Mar Sci 55 818ndash823httpsdoiorg101006jmsc19980389 1998

                            NOAA Teleconnection Pattern Calculation ProceduresClimate Prediction Center Internet Team available athttpswwwcpcncepnoaagovproductsprecipCWlinkdaily_ao_indexhistorymethodshtmlvar (last access 15 June 2017)2005

                            NOAA NCEP-DOE Reanalysis 2 data provided by theNOAAOARESRL PSD Boulder Colorado USA available athttpswwwcpcncepnoaagovproductsprecipCWlinkENSOverfnewaaoshtml last access 25 June 2017

                            OBIS Ocean Biogeographic Information System Intergovernmen-tal Oceanographic Commission of UNESCO available at httpwwwiobisorg last access 18 February 2020

                            httpsdoiorg105194bg-17-3815-2020 Biogeosciences 17 3815ndash3835 2020

                            3834 B L Greaves et al SAM influences phytoplankton in SIZ

                            Ottersen G Planque B Belgrano A Post E ReidP C and Stenseth N C Ecological effects of theNorth Atlantic Oscillation Oecologia 128 1ndash14httpsdoiorg101007s004420100655 2001

                            Parkinson C L A 40-y record reveals gradual Antarctic sea iceincreases followed by decreases at rates far exceeding the ratesseen in the Arctic P Natl Acad Sci USA 116 14414ndash14423httpsdoiorg101073pnas1906556116 2019

                            R Core Team R A Language and Environment for Statistical Com-puting R Foundation for Statistical Computing Vienna Austria2016

                            Rigual-Hernaacutendez A S Trull T W Bray S G Closset Iand Armand L K Seasonal dynamics in diatom and par-ticulate export fluxes to the deep sea in the Australian sec-tor of the southern Antarctic Zone J Mar Syst 142 62ndash74httpsdoiorg101016jjmarsys201410002 2015

                            Roach L A Smith M M and Dean S M Quantify-ing growth of pancake sea ice floes using images fromdrifting buoys J Geophys Res-Ocean 123 2851ndash2866httpsdoiorg1010022017JC013693 2018

                            Rodgers J L and Nicewander W A Thirteen Ways toLook at the Correlation Coefficient Am Stat 42 59ndash66httpsdoiorg10108000031305198810475524 1988

                            Saenz B T and Arrigo K R Annual primary produc-tion in Antarctic sea ice during 2005-2006 from a sea icestate estimate J Geophys Res-Ocean 119 3645ndash3678httpsdoiorg1010022013JC009677 2014

                            Sarthou G Timmermans K R Blain S and Treacuteguer P Growthphysiology and fate of diatoms in the ocean a review J Sea Res53 25ndash42 httpsdoiorg101016jseares200401007 2005

                            Savidge G Priddle J Gilpin L C Bathmann U Murphy EJ Owens N J P Pollard R T Turner D R Veth C andBoyd P An assessment of the role of the marginal ice zone inthe carbon cycle of the Southern Ocean Antarct Sci 8 349ndash358 httpsdoiorg101017S0954102096000521 1996

                            Scheffers B R De Meester L Bridge T C L HoffmannA A Pandolfi J M Corlett R T Butchart S H MPearce-Kelly P Kovacs K M Dudgeon D Pacifici MRondinini C Foden W B Martin T G Mora C Bick-ford D and Watson J E M The broad footprint of climatechange from genes to biomes to people Science 354 aaf7671httpsdoiorg101126scienceaaf7671 2016

                            Schiermeier Q Atmospheric science fixing the sky Nature 460792ndash795 httpsdoiorg101038460792a 2009

                            Schluumlter L Lohbeck K T Gutowska M A Groumlger J P Riebe-sell U and Reusch T B H Adaptation of a globally importantcoccolithophore to ocean warming and acidification Nat ClimChange 4 1024ndash1030 httpsdoiorg101038nclimate23792014

                            Scott F J and Marchant H J (Eds) Antarctic marine protistsAustralian Biological Resources Study Canberra and HobartAustralia 541 pp httpsdoiorg101017s00322474052448192005

                            Sen Gupta A and England M H Coupled oceanndashatmospherendashiceresponse to variations in the Southern Annular Mode J Clim19 4457ndash4486 httpsdoiorg101175JCLI38431 2006

                            Smetacek V and Nicol S Polar ocean ecosys-tems in a changing world Nature 437 362ndash368httpsdoiorg101038nature04161 2005

                            Smetacek V Are declining krill stocks a result of global warmingor of the decimation of the whales in Impacts of global warmingon polar systems Fundacioacuten BBVA edited by Duarte C MBilbao 47ndash83 2008

                            Solomon S Ivy D J Kinnison D Mills M J Neely R R andSchmidt A Emergence of healing in the Antarctic ozone layerScience 353 269ndash274 httpsdoiorg101126scienceaae00612016

                            Son S W Tandon N F Polvani L M and Waugh D W Ozonehole and Southern Hemisphere climate change Geophys ResLett 36 1ndash5 httpsdoiorg1010292009GL038671 2009

                            Soppa M Voumllker C and Bracher A Diatom Phenol-ogy in the Southern Ocean Mean Patterns Trends andthe Role of Climate Oscillations Remote Sens 8 1ndash7httpsdoiorg103390rs8050420 2016

                            Spreen G Kaleschke L and Heygster G Sea ice remote sensingusing AMSR-E 89-GHz channels J Geophys Res-Ocean 113C02S03 httpsdoiorg1010292005JC003384 2008

                            Squire V A Ocean wave interactions with sea icea reappraisal Annu Rev Fluid Mech 52 37ndash60httpsdoiorg101146annurev-fluid-010719-060301 2020

                            Steinacher M Joos F Froumllicher T L Bopp L Cadule PCocco V Doney S C Gehlen M Lindsay K Moore J KSchneider B and Segschneider J Projected 21st century de-crease in marine productivity a multi-model analysis Biogeo-sciences 7 979ndash1005 httpsdoiorg105194bg-7-979-20102010

                            Swart N C and Fyfe J C Observed and simulated changes inthe Southern Hemisphere surface westerly wind-stress GeophysRes Lett 39 1ndash6 httpsdoiorg1010292012GL0528102012

                            Swart N C Fyfe J C Gillett N and Marshall G J Compar-ing Trends in the Southern Annular Mode and Surface WesterlyJet J Clim 28 8840ndash8859 httpsdoiorg101175JCLI-D-15-03341 2015

                            Swiło M Majewski W Minzoni R T and Ander-son J B Diatom assemblages from coastal settingsof West Antarctica Mar Micropaleontol 125 95ndash109httpsdoiorg101016jmarmicro201604001 2016

                            Takahashi T Sutherland S C Wanninkhof R Sweeney CFeely R A Chipman D W Hales B Friederich G ChavezF Sabine C Watson A Bakker D C E Schuster U MetzlN Yoshikawa-Inoue H Ishii M Midorikawa T Nojiri YKoumlrtzinger A Steinhoff T Hoppema M Olafsson J Arnar-son T S Tilbrook B Johannessen T Olsen A Bellerby RWong C S Delille B Bates N R and de Baar H J W Cli-matological mean and decadal change in surface ocean pCO2and net seandashair CO2 flux over the global oceans Deep-Sea ResPt II 56 554ndash577 httpsdoiorg101016jdsr22008120092009

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                            Ter Braak C J and Verdonschot P F Canonical correspondenceanalysis and related multivariate methods in aquatic ecologyAquat Sci 57 255ndash289 httpsdoiorg101007BF008774301995

                            Thompson D W Lee S and Baldwin M P Atmospheric pro-cesses governing the northern hemisphere annular modeNorthAtlantic oscillation Geoph Monog Series 134 81ndash112 2003

                            Thompson D W Solomon S Kushner P J England M HGrise K M and Karoly D J Signatures of the Antarcticozone hole in Southern Hemisphere surface climate change NatGeosci 4 741ndash749 2011

                            Thompson D W J and Solomon S Interpretation of RecentSouthern Hemisphere Climate Change Science 296 895ndash899httpsdoiorg101126science1069270 2002

                            Tomas C R (Ed) Identifying marine phytoplankton Academicpress San Diego California 858 pp 1997

                            Turner J Bracegirdle T J Phillips T Marshall G J and Hosk-ing J S An initial assessment of Antarctic sea ice extent in theCMIP5 models J Clim 26 1473ndash1484 2013

                            Turner J Summerhayes C Sparrow M Mayewski P ConveyP di Prisco G Gutt J Hodgson D Speich S Worby TBo S and Klepikov A Antarctic climate change and the envi-ronment ndash 2015 update Antarctic Treaty Consultative MeetingSofia Bulgaria June 2015 IP 92 2015

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                            Whitaker D and Christman M clustsig Significant Cluster Anal-ysis R package version 11 2014

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                            Wright S W van den Enden R L Pearce I David-son A T Scott F J and Westwood K J Phyto-plankton community structure and stocks in the SouthernOcean (30ndash80 E) determined by CHEMTAX analysis ofHPLC pigment signatures Deep-Sea Res Pt II 57 758ndash778httpsdoiorg101016jdsr2200906015 2010

                            httpsdoiorg105194bg-17-3815-2020 Biogeosciences 17 3815ndash3835 2020

                            • Abstract
                            • Introduction
                              • Importance of the SIZ phytoplankton bloom
                              • The Southern Annular Mode
                              • The hypothesis
                                • Methods
                                  • Phytoplankton relative abundance
                                  • Environmental covariates
                                  • Statistical analysis
                                    • Results
                                      • The influence of the SAM on phytoplankton community composition
                                      • Influence of the SAM on phytoplankton productivity
                                      • Observed occurrence and abundance
                                        • Discussion
                                          • The SAM and phytoplankton community composition
                                          • Effect of the SAM on phytoplankton taxa
                                          • The effects of the SAM on productivity and biomass
                                          • Implications
                                            • Conclusions
                                            • Data availability
                                            • Supplement
                                            • Author contributions
                                            • Competing interests
                                            • Acknowledgements
                                            • Financial support
                                            • Review statement
                                            • References

                              B L Greaves et al SAM influences phytoplankton in SIZ 3829

                              052 respectively p lt 005 Table 2b Fig 5a b) The strongand opposite response to these variables by species belong-ing to the same genus indicates the importance of species-level observation in detecting subtle changes in pelagic phy-toplankton communities

                              A third of analysed taxa comprising 7 taxa and 23 of all counted cells showed no detectable relationship withthe SAM This could be due to large errors associated withlow counts of rarer taxa because unaccounted variation wasmasking any relationship or because the taxa were insensi-tive to the SAM There is less chance of detecting relation-ships between taxa and environment variables when fewerindividuals are counted however some less represented taxadid show relationships with SAM indices (eg Emilianiahuxleyi |r|gt 038 Table 2b) Of the 22 taxa resolved 5showed no significant relationships with either the SAM orD All were comparatively scarce and together representedonly 2 of all cells counted Assessing species composi-tions across a greater fraction of each sample and thus count-ing more of the scarcer taxa may have revealed relationshipsbetween these rarer taxa and environmental variables (Nak-agawa and Cuthill 2007) Yet it remains possible that thesetaxa are actually unaffected by seasonal succession and theSAM instead responding to other environmental variablesthat were not measured as part of this study or that they re-main as persistent but relatively rare background taxa withrespect to the overall phytoplankton assemblage

                              This is the first study to show a link between variationin the SAM and the composition of phytoplankton commu-nities in the SO although similar findings have been re-ported for other major climatic phenomena in other partsof the globe The climatically similar Northern HemisphereAnnular Mode (NAM) causes increased westerly winds anddeeper mixed layers at middle to high northern latitudes inits positive phase (Nehring 1998 Thompson et al 2003Kahru et al 2011) The NAM has been related to the tim-ing abundance and biomass of phytoplankton taxa at highnorthern latitudes (Nehring 1998 Belgrano et al 1999 Ot-tersen et al 2001 Blenckner and Hillebrand 2002) andto the delayed occurrence of maximum chlorophyll in theNorth Atlantic Summer (Kahru et al 2011) Similarly theEl NintildeondashSouthern Oscillation (ENSO) equatorial mode hasbeen shown to influence the distribution and abundance ofphytoplankton in the tropical oceans (Blanchot et al 1992)

                              Phytoplankton are the pastures of the oceans and it is plau-sible that the climate in both autumn and spring influencethe phytoplankton community composition of phytoplank-ton and their ecological progression through the productivespringndashsummer period in the SIZ Climate change impactshave now been documented across every type of ecosystemon Earth (Scheffers et al 2016 Harris et al 2018) and thedistribution abundance phenology and productivity of phy-toplankton communities throughout the world are changingin response to warming acidifying and stratifying oceans(Hoegh-Guldberg and Bruno 2010) We have detected an

                              association between variation in phytoplankton communitycomposition and variation in the SAM over a relatively brief11-year monitoring period despite all the other environmen-tal factors that elicit variability in phytoplankton communi-ties in the SIZ of the SO

                              43 The effects of the SAM on productivity andbiomass

                              A positive SAM has previously been shown to be associ-ated with increased standing stocks and productivity of phy-toplankton in the SIZ of the SO (Arrigo et al 2008 Boyce etal 2010 Soppa et al 2016) In the SIZ above the AntarcticDivergence nutrients are replenished from the deeper oceanthrough the unproductive winter and the levels of nutritionremaining at the end of summer integrate the total draw-down of nutrients by phytoplankton production over the en-tire springndashsummer growing season (Arrigo et al 1999) Weobserved this nutrient drawdown through the springndashsummeras the negative correlation between all macronutrient con-centrations and D (Table 2d) We also observed a nega-tive relationship between all macronutrient concentrations inthe springndashsummer and the previous SAMautumn (Table 2dFig 5d) suggesting that an elevated SAM in autumn leadsto greater productivity and thus greater nutrient drawdownduring the following springndashsummer The nutrient concen-trations at the end of the springndashsummer productive seasonwould be expected to best represent the total productivityover the season we observed that the correlation between nu-trient concentrations and SAMautumn were higher when onlythe 50 of samples collected later in the springndashsummerwere considered (Table 2e) further supporting the conjec-ture that a higher SAM in the autumn is linked with greaterproductivity through the following springndashsummer

                              The observed positive relationship between total chloro-phyll and all the SAM indices (r = 05 to 072 p lt 00025Table 2c) and the presence of apparent spring and autumnmaxima in the response surfaces of the variance in totalchlorophyll explained by the SAM (Fig S1) further sup-port the conjecture that a more positive SAM is linked withgreater total chlorophyll and thus greater total productivityin the SIZ The total chlorophyll data considered were limitedto the 52 samples collected that is estimated for the timesand locations of each sample collection Estimates werecoarsely determined as interpolations of available monthlypredictions (Fig S3) and estimates could be thus obtainedfor only 49 of the 52 samples Yet there are indicators of re-liability in the sparse information the diatom Fragilariopsisrhombica is always relatively small (Table 3) and when therelative abundance of this taxon was high total chlorophyllwas lower (r =minus059 p lt 00025 Table 2b) and when therelative abundance of larger diatoms were high total chloro-phyll was also often high (eg Dactyliosolen antarcticusr = 037 p lt 005 Table 2b)

                              httpsdoiorg105194bg-17-3815-2020 Biogeosciences 17 3815ndash3835 2020

                              3830 B L Greaves et al SAM influences phytoplankton in SIZ

                              44 Implications

                              The SIZ is a productive region of the SO (Moore and Abbott2000) and changes to the SIZ phytoplankton communityhave potentially far-reaching implications for the ecosystemservices these organisms provide including carbon exportto the deep ocean and supporting the productivity of almostall Antarctic life Increases in the relative abundance of thelarger Chaetoceros spp diatoms would favour grazing bylarge metazooplankton especially krill (Boyd et al 1984Kawaguchi et al 1999 Moline et al 2004) which linkphytoplankton to whales seabirds seals and most higherAntarctic life forms (Smetacek 2008) Such changes wouldalso increase the efficiency of the biological pump as thelarger phytoplankton sink more rapidly than small phyto-plankton (Alldredge and Gotschalk 1989) and increasedgrazing by krill would reparcel some phytoplankton biomassinto faeces that would also sink more rapidly (Cadeacutee etal 1992) Such changes in carbon flux and trophodynam-ics would act as a negative feedback on climate change byspeeding the sequestration of carbon to the deep ocean

                              The SAM is predicted to become increasingly positivein the future (Arblaster and Meehl 2006 Swart and Fyfe2012 Gillett and Fyfe 2013 Abram et al 2014 Solomonet al 2016) Our results cannot necessarily be extrapolatedto infer changes that will likely occur as the SAM contin-ues to increase as evolutionary responses can partly miti-gate adverse effects on phytoplankton of longer-term climatechange and future changes in climate are likely to imposeother co-stressors on phytoplankton inhabiting these waters(Lohbeck et al 2014 Schluumlter et al 2014 Deppeler andDavidson 2017) Our study showed that some of the vari-ation in the phytoplankton composition in the seasonal icezone was significantly related to variation in the SAM andthat the sign and magnitude of the correlation with the SAMdiffered among species

                              5 Conclusions

                              Statistical analyses indicated that together the autumn andspring SAM explained a higher percentage (179 ) of thevariation in phytoplankton community composition than anyvariable mostly due to the autumn SAM (up to 133 ) Intotal this exceeded the variance explained by any other vari-able even that attributable to the time of the season thatthe sample was collected (154 ) or other critical phys-ical variables such as temperature salinity and latitudeFurthermore 15 of the 22 phytoplankton taxa identified inthis study showed significant correlation with the SAM andthere were indications that a more positive SAM was relatedto increased phytoplankton productivity in the SIZ Whilethis study was limited in both timespan (11 austral springndashsummers) and the overall variance in phytoplankton compo-sition explained by all the constraining variables (375 ) it

                              suggests that the phytoplankton of the SIZ are indeed sensi-tive to changes in the SAM and thus possibly responsive toclimate change

                              Data availability The dataset used in this paper is available athttpsdoiorg10261795d9181f7308bd (Greaves et al 2019)

                              Supplement The supplement related to this article is available on-line at httpsdoiorg105194bg-17-3815-2020-supplement

                              Author contributions Author contributions BLG contributed toconceptualisation data curation formal analysis investigationmethodology software and supervision validation visualisationwriting of the original draft writing and review and editing ATDcontributed to conceptualisation funding acquisition formal anal-ysis methodology project administration resources supervisionwriting and review and editing ADF contributed to formal analy-sis methodology resources writing and review and editing JPMcontributed to formal analysis methodology software writing andreview and editing AM contributed to project administration su-pervision writing and review and editing AMcM contributed tofunding acquisition project administration resources writing andreview and editing SWM contributed to conceptualisation fund-ing acquisition formal analysis writing and review and editing

                              Competing interests The authors declare that they have no conflictof interest

                              Acknowledgements Sampling on Astrolabe was supported bya FrenchndashAustralian research collaboration The Institut PolaireFranccedilais Paul-Eacutemile-Victor supported access to the ship and fieldoperations The biogeochemical data collection was coordinatedby Alain Poisson and Nicolas Metzl Sorbonne Universiteacute andBronte Tilbrook CSIRO Oceans and Atmosphere Steve Rintoul(CSIRO) and Rose Morrow (LEGOS) coordinated the collection ofsalinity and temperature data The Antarctic Climate and Ecosys-tems CRC and the Integrated Marine Observing System are thankedfor supporting the operation of sensors the collection of water sam-ples and nutrient analyses reported in this study Alan Poole MattSherlock John Akl Kate Berry Lesley Clementson Brian Grif-fiths (CSIRO) Rick van den Enden Rob Johnson (AAD) and themany dedicated volunteers and shipsrsquo officers and crew are thankedfor their important contributions to the field efforts and data man-agement We thank the University of Tasmania and the AustralianAntarctic Division for the space and resources needed to undertakethis work Thanks to Nathaniel Bindoff and Simon Wotherspoon fortheir consideration of parts of the paper Thanks are due to the re-viewer Damiano Righetti for the valuable input he provided in par-ticular for pointing out ambiguities and small errors and improvingthe clarity of the paper and an anonymous reviewer for the struc-tural and theoretical considerations Total chlorophyll data used inthis paper were produced with the Giovanni online data system de-veloped and maintained by the NASA GES DISC

                              Biogeosciences 17 3815ndash3835 2020 httpsdoiorg105194bg-17-3815-2020

                              B L Greaves et al SAM influences phytoplankton in SIZ 3831

                              Financial support This research has been supported by the Uni-versity of Tasmania (Institute of Marine and Antarctic Studies) bythe Australian Governmentrsquos Cooperative Research Centre programthrough the Antarctic Climate and Ecosystems CRC the AustralianAntarctic Division (projects 40 and 4107) and by the Australian Re-search Councilrsquos Special Research Initiative for Antarctic GatewayPartnership (project no SR140300001)

                              Review statement This paper was edited by Julia Uitz and re-viewed by Damiano Righetti and one anonymous referee

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                              3832 B L Greaves et al SAM influences phytoplankton in SIZ

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                              Lovenduski N S and Gruber N Impact of the Southern AnnularMode on Southern Ocean circulation and biology Geophys ResLett 32 1ndash4 httpsdoiorg1010292005GL022727 2005

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                              Wright S W van den Enden R L Pearce I David-son A T Scott F J and Westwood K J Phyto-plankton community structure and stocks in the SouthernOcean (30ndash80 E) determined by CHEMTAX analysis ofHPLC pigment signatures Deep-Sea Res Pt II 57 758ndash778httpsdoiorg101016jdsr2200906015 2010

                              httpsdoiorg105194bg-17-3815-2020 Biogeosciences 17 3815ndash3835 2020

                              • Abstract
                              • Introduction
                                • Importance of the SIZ phytoplankton bloom
                                • The Southern Annular Mode
                                • The hypothesis
                                  • Methods
                                    • Phytoplankton relative abundance
                                    • Environmental covariates
                                    • Statistical analysis
                                      • Results
                                        • The influence of the SAM on phytoplankton community composition
                                        • Influence of the SAM on phytoplankton productivity
                                        • Observed occurrence and abundance
                                          • Discussion
                                            • The SAM and phytoplankton community composition
                                            • Effect of the SAM on phytoplankton taxa
                                            • The effects of the SAM on productivity and biomass
                                            • Implications
                                              • Conclusions
                                              • Data availability
                                              • Supplement
                                              • Author contributions
                                              • Competing interests
                                              • Acknowledgements
                                              • Financial support
                                              • Review statement
                                              • References

                                3830 B L Greaves et al SAM influences phytoplankton in SIZ

                                44 Implications

                                The SIZ is a productive region of the SO (Moore and Abbott2000) and changes to the SIZ phytoplankton communityhave potentially far-reaching implications for the ecosystemservices these organisms provide including carbon exportto the deep ocean and supporting the productivity of almostall Antarctic life Increases in the relative abundance of thelarger Chaetoceros spp diatoms would favour grazing bylarge metazooplankton especially krill (Boyd et al 1984Kawaguchi et al 1999 Moline et al 2004) which linkphytoplankton to whales seabirds seals and most higherAntarctic life forms (Smetacek 2008) Such changes wouldalso increase the efficiency of the biological pump as thelarger phytoplankton sink more rapidly than small phyto-plankton (Alldredge and Gotschalk 1989) and increasedgrazing by krill would reparcel some phytoplankton biomassinto faeces that would also sink more rapidly (Cadeacutee etal 1992) Such changes in carbon flux and trophodynam-ics would act as a negative feedback on climate change byspeeding the sequestration of carbon to the deep ocean

                                The SAM is predicted to become increasingly positivein the future (Arblaster and Meehl 2006 Swart and Fyfe2012 Gillett and Fyfe 2013 Abram et al 2014 Solomonet al 2016) Our results cannot necessarily be extrapolatedto infer changes that will likely occur as the SAM contin-ues to increase as evolutionary responses can partly miti-gate adverse effects on phytoplankton of longer-term climatechange and future changes in climate are likely to imposeother co-stressors on phytoplankton inhabiting these waters(Lohbeck et al 2014 Schluumlter et al 2014 Deppeler andDavidson 2017) Our study showed that some of the vari-ation in the phytoplankton composition in the seasonal icezone was significantly related to variation in the SAM andthat the sign and magnitude of the correlation with the SAMdiffered among species

                                5 Conclusions

                                Statistical analyses indicated that together the autumn andspring SAM explained a higher percentage (179 ) of thevariation in phytoplankton community composition than anyvariable mostly due to the autumn SAM (up to 133 ) Intotal this exceeded the variance explained by any other vari-able even that attributable to the time of the season thatthe sample was collected (154 ) or other critical phys-ical variables such as temperature salinity and latitudeFurthermore 15 of the 22 phytoplankton taxa identified inthis study showed significant correlation with the SAM andthere were indications that a more positive SAM was relatedto increased phytoplankton productivity in the SIZ Whilethis study was limited in both timespan (11 austral springndashsummers) and the overall variance in phytoplankton compo-sition explained by all the constraining variables (375 ) it

                                suggests that the phytoplankton of the SIZ are indeed sensi-tive to changes in the SAM and thus possibly responsive toclimate change

                                Data availability The dataset used in this paper is available athttpsdoiorg10261795d9181f7308bd (Greaves et al 2019)

                                Supplement The supplement related to this article is available on-line at httpsdoiorg105194bg-17-3815-2020-supplement

                                Author contributions Author contributions BLG contributed toconceptualisation data curation formal analysis investigationmethodology software and supervision validation visualisationwriting of the original draft writing and review and editing ATDcontributed to conceptualisation funding acquisition formal anal-ysis methodology project administration resources supervisionwriting and review and editing ADF contributed to formal analy-sis methodology resources writing and review and editing JPMcontributed to formal analysis methodology software writing andreview and editing AM contributed to project administration su-pervision writing and review and editing AMcM contributed tofunding acquisition project administration resources writing andreview and editing SWM contributed to conceptualisation fund-ing acquisition formal analysis writing and review and editing

                                Competing interests The authors declare that they have no conflictof interest

                                Acknowledgements Sampling on Astrolabe was supported bya FrenchndashAustralian research collaboration The Institut PolaireFranccedilais Paul-Eacutemile-Victor supported access to the ship and fieldoperations The biogeochemical data collection was coordinatedby Alain Poisson and Nicolas Metzl Sorbonne Universiteacute andBronte Tilbrook CSIRO Oceans and Atmosphere Steve Rintoul(CSIRO) and Rose Morrow (LEGOS) coordinated the collection ofsalinity and temperature data The Antarctic Climate and Ecosys-tems CRC and the Integrated Marine Observing System are thankedfor supporting the operation of sensors the collection of water sam-ples and nutrient analyses reported in this study Alan Poole MattSherlock John Akl Kate Berry Lesley Clementson Brian Grif-fiths (CSIRO) Rick van den Enden Rob Johnson (AAD) and themany dedicated volunteers and shipsrsquo officers and crew are thankedfor their important contributions to the field efforts and data man-agement We thank the University of Tasmania and the AustralianAntarctic Division for the space and resources needed to undertakethis work Thanks to Nathaniel Bindoff and Simon Wotherspoon fortheir consideration of parts of the paper Thanks are due to the re-viewer Damiano Righetti for the valuable input he provided in par-ticular for pointing out ambiguities and small errors and improvingthe clarity of the paper and an anonymous reviewer for the struc-tural and theoretical considerations Total chlorophyll data used inthis paper were produced with the Giovanni online data system de-veloped and maintained by the NASA GES DISC

                                Biogeosciences 17 3815ndash3835 2020 httpsdoiorg105194bg-17-3815-2020

                                B L Greaves et al SAM influences phytoplankton in SIZ 3831

                                Financial support This research has been supported by the Uni-versity of Tasmania (Institute of Marine and Antarctic Studies) bythe Australian Governmentrsquos Cooperative Research Centre programthrough the Antarctic Climate and Ecosystems CRC the AustralianAntarctic Division (projects 40 and 4107) and by the Australian Re-search Councilrsquos Special Research Initiative for Antarctic GatewayPartnership (project no SR140300001)

                                Review statement This paper was edited by Julia Uitz and re-viewed by Damiano Righetti and one anonymous referee

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                                httpsdoiorg105194bg-17-3815-2020 Biogeosciences 17 3815ndash3835 2020

                                • Abstract
                                • Introduction
                                  • Importance of the SIZ phytoplankton bloom
                                  • The Southern Annular Mode
                                  • The hypothesis
                                    • Methods
                                      • Phytoplankton relative abundance
                                      • Environmental covariates
                                      • Statistical analysis
                                        • Results
                                          • The influence of the SAM on phytoplankton community composition
                                          • Influence of the SAM on phytoplankton productivity
                                          • Observed occurrence and abundance
                                            • Discussion
                                              • The SAM and phytoplankton community composition
                                              • Effect of the SAM on phytoplankton taxa
                                              • The effects of the SAM on productivity and biomass
                                              • Implications
                                                • Conclusions
                                                • Data availability
                                                • Supplement
                                                • Author contributions
                                                • Competing interests
                                                • Acknowledgements
                                                • Financial support
                                                • Review statement
                                                • References

                                  B L Greaves et al SAM influences phytoplankton in SIZ 3831

                                  Financial support This research has been supported by the Uni-versity of Tasmania (Institute of Marine and Antarctic Studies) bythe Australian Governmentrsquos Cooperative Research Centre programthrough the Antarctic Climate and Ecosystems CRC the AustralianAntarctic Division (projects 40 and 4107) and by the Australian Re-search Councilrsquos Special Research Initiative for Antarctic GatewayPartnership (project no SR140300001)

                                  Review statement This paper was edited by Julia Uitz and re-viewed by Damiano Righetti and one anonymous referee

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                                  3832 B L Greaves et al SAM influences phytoplankton in SIZ

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                                  httpsdoiorg105194bg-17-3815-2020 Biogeosciences 17 3815ndash3835 2020

                                  • Abstract
                                  • Introduction
                                    • Importance of the SIZ phytoplankton bloom
                                    • The Southern Annular Mode
                                    • The hypothesis
                                      • Methods
                                        • Phytoplankton relative abundance
                                        • Environmental covariates
                                        • Statistical analysis
                                          • Results
                                            • The influence of the SAM on phytoplankton community composition
                                            • Influence of the SAM on phytoplankton productivity
                                            • Observed occurrence and abundance
                                              • Discussion
                                                • The SAM and phytoplankton community composition
                                                • Effect of the SAM on phytoplankton taxa
                                                • The effects of the SAM on productivity and biomass
                                                • Implications
                                                  • Conclusions
                                                  • Data availability
                                                  • Supplement
                                                  • Author contributions
                                                  • Competing interests
                                                  • Acknowledgements
                                                  • Financial support
                                                  • Review statement
                                                  • References

                                    3832 B L Greaves et al SAM influences phytoplankton in SIZ

                                    files and biota-environment linkage J Exp Mar Biol Ecol366 56ndash69 httpsdoiorg101016jjembe200807009 2008

                                    Cohen J Things I have learned (so far) some things youlearn arenrsquot so less is more Am Psychol 45 1304ndash1312httpsdoiorg1010370003-066X45121304 1990

                                    Constable A J Melbourne-Thomas J Corney S P Arrigo KR Barbraud C Barnes D K A Bindoff N L Boyd P WBrandt A Costa D P and Davidson A T Climate change andSouthern Ocean ecosystems I How changes in physical habitatsdirectly affect marine biota Glob Change Biol 20 3004ndash3025httpsdoiorg101111gcb12623 2014

                                    Dargie T C D On the integrated interpretation of in-direct site ordinations a case study using semi-aridvegetation in southeastern Spain Vegetatio 55 37ndash55httpsdoiorg101007BF00039980 1984

                                    Davidson A T McKinlay J Westwood K Thomson P Gvan den Enden R de Salas M Wright S Johnson R andBerry K Enhanced CO2 concentrations change the structure ofAntarctic marine microbial communities Mar Ecol Prog Ser552 93ndash113 httpsdoiorg103354meps11742 2016

                                    Deppeler S L and Davidson A T Southern Ocean phyto-plankton in a changing climate Front Mar Sci 4 1ndash28httpsdoiorg103389fmars201700040 2017

                                    DiFiore P J Sigman D M Trull T W Lourey M J KarshK Cane G and Ho R Nitrogen isotope constraints on sub-antarctic biogeochemistry J Geophys Res-Ocean 111 1ndash19httpsdoiorg1010292005JC003216 2006

                                    Dixon P VEGAN a package of R functions for community ecol-ogy J Veg Sci 14 631ndash637 httpsdoiorg101111j1654-11032003tb02228x 2003

                                    Fitch D T and Moore J K Wind speed influence onphytoplankton bloom dynamics in the Southern OceanMarginal Ice Zone J Geophys Res-Ocean 112 1ndash13httpsdoiorg1010292006JC004061 2007

                                    Fryxell G A Marine phytoplankton at the Weddell Sea ice edgeSeasonal changes at the specific level Polar Biol 10 6ndash7httpsdoiorg101007BF00238285 1989

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                                    Gillett N P and Fyfe J C Annular mode changes in theCMIP5 simulations Geophys Res Lett 40 1189ndash1193httpsdoiorg101002grl50249 2013

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                                    Gomi Y Taniguchi A and Fukuchi M Temporal and spatialvariation of the phytoplankton assemblage in the eastern Indiansector of the Southern Ocean in summer 20012002 Polar Biol30 817ndash827 httpsdoiorg101007s00300-006-0242-2 2007

                                    Gong D and Wang S Definition of Antarctic os-cillation index Geophys Res Lett 26 459ndash462httpsdoiorg1010291999GL900003 1999

                                    Greaves B L Davidson A T and Fraser A D The SouthernAnnular Mode (SAM) influences phytoplankton communities inthe seasonal ice zone of the Southern Ocean Ver 1 Australian

                                    Antarctic Data Centre httpsdoiorg10261795d9181f7308bd2019

                                    Green S E and Sambrotto R N Plankton communitystructure and export of C N P and Si in the Antarc-tic Circumpolar Current Deep-Sea Res Pt II 53 620ndash643httpsdoiorg101016jdsr2200601022 2006

                                    Hall A and Visbeck M Synchronous variabil-ity in the Southern Hemisphere atmosphere seaice and ocean resulting from the annular mode JClim 15 3043ndash3057 httpsdoiorg1011751520-0442(2002)015lt3043SVITSHgt20CO2 2002

                                    Harris R M B Beaumont L J Vance T R Tozer C R Re-menyi T A Perkins-Kirkpatrick S E Mitchell PJ NicotraAB McGregor S Andrew NR Letnic M Kearney M RWernberg T Hutley L B Chambers L E Fletcher M-SKeatley M R Woodward C A Williamson G Duke N Cand Bowman D M J S Biological responses to the press andpulse of climate trends and extreme events Nat Clim Change8 579ndash587 httpsdoiorg101038s41558-018-0187-9 2018

                                    Henson S A Yool A and Sanders R Variabilityin efficiency of particulate organic carbon export Amodel study Global Biogeochem Cy 29 33ndash45httpsdoiorg1010022014GB004965 2015

                                    Hines K M Bromwich D H and Marshall G J Ar-tificial surface pressure trends in the NCEP-NCAR re-analysis over the Southern Ocean and Antartica JClim 13 3940ndash3952 httpsdoiorg1011751520-0442(2000)013lt3940ASPTITgt20CO2 2000

                                    Ho M Kiem A S and Verdon-Kidd D C The Southern An-nular Mode a comparison of indices Hydrol Earth Syst Sci16 967ndash982 httpshttpsdoiorg105194hess-16-967-20122012

                                    Hoegh-Guldberg O and Bruno J F The impact of climate changeon the worldrsquos marine ecosystems Science 328 1523ndash1528httpsdoiorg101126science1189930 2010

                                    Hydes D J Aoyama M Aminot A Bakker K Becker S Cov-erly S Daniel A Dickson A G Grosso O Kerouel Rvan Ooijen J Sato K Tanhua T Woodward E M S andZhang J Z Determination of Dissolved Nutrients (N P SI)in Seawater With High Precision and Inter-Comparability Us-ing Gas-Segmented Continuous Flow Analysers in The GO-SHIP repeat hydrography manual a collection of expert re-ports and guidelines edited by Hood E M Sabine C Land Sloyan B M IOCCP report number 14 ICPO publicationseries number 134 UNESCO-IOC Paris France available athttpwwwgo-shiporgHydroManhtml (last access 15 January2020) 2010

                                    Clem K R Crosta X de Lavergne C Eisenman I Eng-land M H Fogt R L Frankcombe L M MarshallG J Masson-Delmotte V Morrison A K Orsi A JRaphael M N Renwick J A Schneider D P Simp-kins G R Steig E J Stenni B Swingedouw D andVance T R Assessing recent trends in high-latitude SouthernHemisphere surface climate Nat Clim Change 6 917ndash926httpsdoiorg101038nclimate3103 2016

                                    Kahru M Brotas V Manzano-Sarabia M and Mitchell B GAre phytoplankton blooms occurring earlier in the Arctic GlobChange Biol 17 1733ndash1739 httpsdoiorg101111j1365-2486201002312x 2011

                                    Biogeosciences 17 3815ndash3835 2020 httpsdoiorg105194bg-17-3815-2020

                                    B L Greaves et al SAM influences phytoplankton in SIZ 3833

                                    Kawaguchi S Ichii T and Naganobu M Green krill the indi-cator of micro-and nano-size phytoplankton availability to krillPolar Biol 22 133ndash136 1999

                                    Kohyama T and Hartmann D L Antarctic sea ice response toweather and climate modes of variability J Clime 29 721ndash741httpsdoiorg101175JCLI-D-15-03011 2016

                                    Kwok R and Comiso J C Southern Ocean climate andsea ice anomalies associated with the Southern Oscilla-tion J Clim 15 487ndash501 httpsdoiorg1011751520-0442(2002)015lt0487SOCASIgt20CO2 2002

                                    Lampitt R S and Antia A N Particle flux in deep seas Regionalcharacteristics and temporal variability Deep-Sea Res Pt I44 1377ndash1403 httpsdoiorg101016S0967-0637(97)00020-4 1997

                                    Lannuzel D Schoemann V de Jong J Tison J L andChou L Distribution and biogeochemical behaviour of ironin the East Antarctic sea ice Mar Chem 106 18ndash32httpsdoiorg101016jmarchem200606010 2007

                                    Lefebvre W Goosse H Timmermann R and FichefetT Influence of the Southern Annular Mode on the seaice-ocean system J Geophys Res-Ocean 109 1ndash12httpsdoiorg1010292004JC002403 2004

                                    Legendre P and Anderson M J Distance-based re-dundancy analysis testing multispecies responsesin multifactorial ecological experiments EcolMonogr 69 1ndash24 httpsdoiorg1018900012-9615(1999)069[0001DBRATM]20CO2 1999

                                    Legendre P Oksanen J and ter Braak C J Testing thesignificance of canonical axes in redundancy analysis Meth-ods Ecol Evol 2 269ndash277 httpsdoiorg101111j2041-210X201000078x 2011

                                    Lenton A and Matear R J Role of the Southern Annular Mode(SAM) in Southern Ocean CO2 uptake Global Biogeochem Cy21 1-17 httpsdoiorg1010292006GB002714 2007

                                    Lohbeck K T Riebesell U and Reusch T B H Gene expres-sion changes in the coccolithophore Emiliania huxleyi after 500generations of selection to ocean acidification P Roy Soc B281 1ndash7 httpsdoiorg101098rspb20140003 2014

                                    Lovenduski N S Gruber N Doney S C and Lima I D En-hanced CO2 outgassing in the Southern Ocean from a positivephase of the Southern Annular Mode Global Biogeochem Cy21 1ndash14 httpsdoiorg1010292006GB002900 2007

                                    Lovenduski N S and Gruber N Impact of the Southern AnnularMode on Southern Ocean circulation and biology Geophys ResLett 32 1ndash4 httpsdoiorg1010292005GL022727 2005

                                    Mackas D L Does blending of chlorophylldata bias temporal trend Nature 472 E4ndashE5httpsdoiorg101038nature09951 2011

                                    Mackintosh A N Anderson B M Lorrey A M Renwick JA Frei P and Dean S M Regional cooling caused recentNew Zealand glacier advances in a period of global warmingNat Commun 8 1ndash13 httpsdoiorg101038ncomms142022017

                                    Marshall G J Trends in the Southern Annu-lar Mode from Observations and Reanalyses JClim 16 4134ndash4143 httpsdoiorg1011751520-0442(2003)016lt4134TITSAMgt20CO2 2003

                                    Marshall G J Half-century seasonal relationships between theSouthern Annular mode and Antarctic temperatures Int J Cli-matol 27 373ndash383 httpsdoiorg101002joc1407 2007

                                    Martin A McMinn A Heath M Hegseth E N and Ryan KG The physiological response to increased temperature in over-wintering sea ice algae and phytoplankton in McMurdo SoundAntarctica and Tromsoslash Sound Norway J Exp Mar Biol Ecol428 57ndash66 httpsdoiorg101016jjembe201206006 2012

                                    Massom R A and Stammerjohn S E Antarctic sea ice changeand variability ndash Physical and ecological implications Polar Sci4 149ndash186 httpsdoiorg101016jpolar201005001 2010

                                    McMinn A Ashworth C and Ryan K Growth and Productivityof Antarctic Sea Ice Algae under PAR and UV Irradiances BotMar 42 401ndash407 httpsdoiorg101515BOT1999046 1999

                                    McMinn A and Martin A Dark survival in awarming world P Roy Soc B 280 20122909httpsdoiorg101098rspb20122909 2013

                                    Meredith M P Murphy E J Hawker E J King JC and Wallace M I On the interannual variability ofocean temperatures around South Georgia Southern OceanForcing by El NintildeoSouthern Oscillation and the South-ern Annular Mode Deep-Sea Res Pt II 55 2007ndash2022httpsdoiorg101016jdsr2200805020 2008

                                    Mo K C Relationships between low-frequency variability inthe Southern Hemisphere and sea surface temperature anoma-lies J Clim 13 3599ndash3610 httpsdoiorg1011751520-0442(2000)013lt3599rblfvigt20co2 2000

                                    Moline M A Claustre H Frazer T K Schofield O andVernet M Alteration of the food web along the Antarc-tic Peninsula in response to a regional warming trend GlobChange Biol 10 1973ndash1980 httpsdoiorg101111j1365-2486200400825x 2004

                                    Moore J K and Abbott M R Phytoplankton chloro-phyll distributions and primary production in the South-ern Ocean J Geophys Res-Ocean 105 28709ndash28722httpsdoiorg1010291999JC000043 2000

                                    Nakagawa S A farewell to Bonferroni the problems of low sta-tistical power and publication bias Behav Ecol 15 1044ndash1045httpsdoiorg101093behecoarh107 2004

                                    Nakagawa S and Cuthill I C Effect size confidence inter-val and statistical significance a practical guide for biolo-gists Biol Rev 82 591ndash605 httpsdoiorg101111j1469-185X200700027x 2007

                                    Nehring S Establishment of thermophilic phytoplankton speciesin the North Sea biological indicators of climatic changesShort communication ICES J Mar Sci 55 818ndash823httpsdoiorg101006jmsc19980389 1998

                                    NOAA Teleconnection Pattern Calculation ProceduresClimate Prediction Center Internet Team available athttpswwwcpcncepnoaagovproductsprecipCWlinkdaily_ao_indexhistorymethodshtmlvar (last access 15 June 2017)2005

                                    NOAA NCEP-DOE Reanalysis 2 data provided by theNOAAOARESRL PSD Boulder Colorado USA available athttpswwwcpcncepnoaagovproductsprecipCWlinkENSOverfnewaaoshtml last access 25 June 2017

                                    OBIS Ocean Biogeographic Information System Intergovernmen-tal Oceanographic Commission of UNESCO available at httpwwwiobisorg last access 18 February 2020

                                    httpsdoiorg105194bg-17-3815-2020 Biogeosciences 17 3815ndash3835 2020

                                    3834 B L Greaves et al SAM influences phytoplankton in SIZ

                                    Ottersen G Planque B Belgrano A Post E ReidP C and Stenseth N C Ecological effects of theNorth Atlantic Oscillation Oecologia 128 1ndash14httpsdoiorg101007s004420100655 2001

                                    Parkinson C L A 40-y record reveals gradual Antarctic sea iceincreases followed by decreases at rates far exceeding the ratesseen in the Arctic P Natl Acad Sci USA 116 14414ndash14423httpsdoiorg101073pnas1906556116 2019

                                    R Core Team R A Language and Environment for Statistical Com-puting R Foundation for Statistical Computing Vienna Austria2016

                                    Rigual-Hernaacutendez A S Trull T W Bray S G Closset Iand Armand L K Seasonal dynamics in diatom and par-ticulate export fluxes to the deep sea in the Australian sec-tor of the southern Antarctic Zone J Mar Syst 142 62ndash74httpsdoiorg101016jjmarsys201410002 2015

                                    Roach L A Smith M M and Dean S M Quantify-ing growth of pancake sea ice floes using images fromdrifting buoys J Geophys Res-Ocean 123 2851ndash2866httpsdoiorg1010022017JC013693 2018

                                    Rodgers J L and Nicewander W A Thirteen Ways toLook at the Correlation Coefficient Am Stat 42 59ndash66httpsdoiorg10108000031305198810475524 1988

                                    Saenz B T and Arrigo K R Annual primary produc-tion in Antarctic sea ice during 2005-2006 from a sea icestate estimate J Geophys Res-Ocean 119 3645ndash3678httpsdoiorg1010022013JC009677 2014

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                                    Savidge G Priddle J Gilpin L C Bathmann U Murphy EJ Owens N J P Pollard R T Turner D R Veth C andBoyd P An assessment of the role of the marginal ice zone inthe carbon cycle of the Southern Ocean Antarct Sci 8 349ndash358 httpsdoiorg101017S0954102096000521 1996

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                                    Schiermeier Q Atmospheric science fixing the sky Nature 460792ndash795 httpsdoiorg101038460792a 2009

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                                    Smetacek V Are declining krill stocks a result of global warmingor of the decimation of the whales in Impacts of global warmingon polar systems Fundacioacuten BBVA edited by Duarte C MBilbao 47ndash83 2008

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                                    Son S W Tandon N F Polvani L M and Waugh D W Ozonehole and Southern Hemisphere climate change Geophys ResLett 36 1ndash5 httpsdoiorg1010292009GL038671 2009

                                    Soppa M Voumllker C and Bracher A Diatom Phenol-ogy in the Southern Ocean Mean Patterns Trends andthe Role of Climate Oscillations Remote Sens 8 1ndash7httpsdoiorg103390rs8050420 2016

                                    Spreen G Kaleschke L and Heygster G Sea ice remote sensingusing AMSR-E 89-GHz channels J Geophys Res-Ocean 113C02S03 httpsdoiorg1010292005JC003384 2008

                                    Squire V A Ocean wave interactions with sea icea reappraisal Annu Rev Fluid Mech 52 37ndash60httpsdoiorg101146annurev-fluid-010719-060301 2020

                                    Steinacher M Joos F Froumllicher T L Bopp L Cadule PCocco V Doney S C Gehlen M Lindsay K Moore J KSchneider B and Segschneider J Projected 21st century de-crease in marine productivity a multi-model analysis Biogeo-sciences 7 979ndash1005 httpsdoiorg105194bg-7-979-20102010

                                    Swart N C and Fyfe J C Observed and simulated changes inthe Southern Hemisphere surface westerly wind-stress GeophysRes Lett 39 1ndash6 httpsdoiorg1010292012GL0528102012

                                    Swart N C Fyfe J C Gillett N and Marshall G J Compar-ing Trends in the Southern Annular Mode and Surface WesterlyJet J Clim 28 8840ndash8859 httpsdoiorg101175JCLI-D-15-03341 2015

                                    Swiło M Majewski W Minzoni R T and Ander-son J B Diatom assemblages from coastal settingsof West Antarctica Mar Micropaleontol 125 95ndash109httpsdoiorg101016jmarmicro201604001 2016

                                    Takahashi T Sutherland S C Wanninkhof R Sweeney CFeely R A Chipman D W Hales B Friederich G ChavezF Sabine C Watson A Bakker D C E Schuster U MetzlN Yoshikawa-Inoue H Ishii M Midorikawa T Nojiri YKoumlrtzinger A Steinhoff T Hoppema M Olafsson J Arnar-son T S Tilbrook B Johannessen T Olsen A Bellerby RWong C S Delille B Bates N R and de Baar H J W Cli-matological mean and decadal change in surface ocean pCO2and net seandashair CO2 flux over the global oceans Deep-Sea ResPt II 56 554ndash577 httpsdoiorg101016jdsr22008120092009

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                                    Biogeosciences 17 3815ndash3835 2020 httpsdoiorg105194bg-17-3815-2020

                                    B L Greaves et al SAM influences phytoplankton in SIZ 3835

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                                    Thompson D W Lee S and Baldwin M P Atmospheric pro-cesses governing the northern hemisphere annular modeNorthAtlantic oscillation Geoph Monog Series 134 81ndash112 2003

                                    Thompson D W Solomon S Kushner P J England M HGrise K M and Karoly D J Signatures of the Antarcticozone hole in Southern Hemisphere surface climate change NatGeosci 4 741ndash749 2011

                                    Thompson D W J and Solomon S Interpretation of RecentSouthern Hemisphere Climate Change Science 296 895ndash899httpsdoiorg101126science1069270 2002

                                    Tomas C R (Ed) Identifying marine phytoplankton Academicpress San Diego California 858 pp 1997

                                    Turner J Bracegirdle T J Phillips T Marshall G J and Hosk-ing J S An initial assessment of Antarctic sea ice extent in theCMIP5 models J Clim 26 1473ndash1484 2013

                                    Turner J Summerhayes C Sparrow M Mayewski P ConveyP di Prisco G Gutt J Hodgson D Speich S Worby TBo S and Klepikov A Antarctic climate change and the envi-ronment ndash 2015 update Antarctic Treaty Consultative MeetingSofia Bulgaria June 2015 IP 92 2015

                                    Waters R L Van Den Enden R and Marchant H J Summer mi-crobial ecology off East Antarctica (80ndash150 E) protistan com-munity structure and bacterial abundance Deep-Sea Res Pt II47 2401ndash2435 httpsdoiorg101016S0967-0645(00)00030-8 2000

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                                    Whitaker D and Christman M clustsig Significant Cluster Anal-ysis R package version 11 2014

                                    Wilson D L Smith Jr W O and Nelson D M Phytoplanktonbloom dynamics of the western Ross Sea ice edge ndash I Primaryproductivity and species-specific production Deep-Sea Res PtI 33 1375ndash1387 httpsdoiorg1010160198-0149(86)90041-5 1986

                                    Wright S W van den Enden R L Pearce I David-son A T Scott F J and Westwood K J Phyto-plankton community structure and stocks in the SouthernOcean (30ndash80 E) determined by CHEMTAX analysis ofHPLC pigment signatures Deep-Sea Res Pt II 57 758ndash778httpsdoiorg101016jdsr2200906015 2010

                                    httpsdoiorg105194bg-17-3815-2020 Biogeosciences 17 3815ndash3835 2020

                                    • Abstract
                                    • Introduction
                                      • Importance of the SIZ phytoplankton bloom
                                      • The Southern Annular Mode
                                      • The hypothesis
                                        • Methods
                                          • Phytoplankton relative abundance
                                          • Environmental covariates
                                          • Statistical analysis
                                            • Results
                                              • The influence of the SAM on phytoplankton community composition
                                              • Influence of the SAM on phytoplankton productivity
                                              • Observed occurrence and abundance
                                                • Discussion
                                                  • The SAM and phytoplankton community composition
                                                  • Effect of the SAM on phytoplankton taxa
                                                  • The effects of the SAM on productivity and biomass
                                                  • Implications
                                                    • Conclusions
                                                    • Data availability
                                                    • Supplement
                                                    • Author contributions
                                                    • Competing interests
                                                    • Acknowledgements
                                                    • Financial support
                                                    • Review statement
                                                    • References

                                      B L Greaves et al SAM influences phytoplankton in SIZ 3833

                                      Kawaguchi S Ichii T and Naganobu M Green krill the indi-cator of micro-and nano-size phytoplankton availability to krillPolar Biol 22 133ndash136 1999

                                      Kohyama T and Hartmann D L Antarctic sea ice response toweather and climate modes of variability J Clime 29 721ndash741httpsdoiorg101175JCLI-D-15-03011 2016

                                      Kwok R and Comiso J C Southern Ocean climate andsea ice anomalies associated with the Southern Oscilla-tion J Clim 15 487ndash501 httpsdoiorg1011751520-0442(2002)015lt0487SOCASIgt20CO2 2002

                                      Lampitt R S and Antia A N Particle flux in deep seas Regionalcharacteristics and temporal variability Deep-Sea Res Pt I44 1377ndash1403 httpsdoiorg101016S0967-0637(97)00020-4 1997

                                      Lannuzel D Schoemann V de Jong J Tison J L andChou L Distribution and biogeochemical behaviour of ironin the East Antarctic sea ice Mar Chem 106 18ndash32httpsdoiorg101016jmarchem200606010 2007

                                      Lefebvre W Goosse H Timmermann R and FichefetT Influence of the Southern Annular Mode on the seaice-ocean system J Geophys Res-Ocean 109 1ndash12httpsdoiorg1010292004JC002403 2004

                                      Legendre P and Anderson M J Distance-based re-dundancy analysis testing multispecies responsesin multifactorial ecological experiments EcolMonogr 69 1ndash24 httpsdoiorg1018900012-9615(1999)069[0001DBRATM]20CO2 1999

                                      Legendre P Oksanen J and ter Braak C J Testing thesignificance of canonical axes in redundancy analysis Meth-ods Ecol Evol 2 269ndash277 httpsdoiorg101111j2041-210X201000078x 2011

                                      Lenton A and Matear R J Role of the Southern Annular Mode(SAM) in Southern Ocean CO2 uptake Global Biogeochem Cy21 1-17 httpsdoiorg1010292006GB002714 2007

                                      Lohbeck K T Riebesell U and Reusch T B H Gene expres-sion changes in the coccolithophore Emiliania huxleyi after 500generations of selection to ocean acidification P Roy Soc B281 1ndash7 httpsdoiorg101098rspb20140003 2014

                                      Lovenduski N S Gruber N Doney S C and Lima I D En-hanced CO2 outgassing in the Southern Ocean from a positivephase of the Southern Annular Mode Global Biogeochem Cy21 1ndash14 httpsdoiorg1010292006GB002900 2007

                                      Lovenduski N S and Gruber N Impact of the Southern AnnularMode on Southern Ocean circulation and biology Geophys ResLett 32 1ndash4 httpsdoiorg1010292005GL022727 2005

                                      Mackas D L Does blending of chlorophylldata bias temporal trend Nature 472 E4ndashE5httpsdoiorg101038nature09951 2011

                                      Mackintosh A N Anderson B M Lorrey A M Renwick JA Frei P and Dean S M Regional cooling caused recentNew Zealand glacier advances in a period of global warmingNat Commun 8 1ndash13 httpsdoiorg101038ncomms142022017

                                      Marshall G J Trends in the Southern Annu-lar Mode from Observations and Reanalyses JClim 16 4134ndash4143 httpsdoiorg1011751520-0442(2003)016lt4134TITSAMgt20CO2 2003

                                      Marshall G J Half-century seasonal relationships between theSouthern Annular mode and Antarctic temperatures Int J Cli-matol 27 373ndash383 httpsdoiorg101002joc1407 2007

                                      Martin A McMinn A Heath M Hegseth E N and Ryan KG The physiological response to increased temperature in over-wintering sea ice algae and phytoplankton in McMurdo SoundAntarctica and Tromsoslash Sound Norway J Exp Mar Biol Ecol428 57ndash66 httpsdoiorg101016jjembe201206006 2012

                                      Massom R A and Stammerjohn S E Antarctic sea ice changeand variability ndash Physical and ecological implications Polar Sci4 149ndash186 httpsdoiorg101016jpolar201005001 2010

                                      McMinn A Ashworth C and Ryan K Growth and Productivityof Antarctic Sea Ice Algae under PAR and UV Irradiances BotMar 42 401ndash407 httpsdoiorg101515BOT1999046 1999

                                      McMinn A and Martin A Dark survival in awarming world P Roy Soc B 280 20122909httpsdoiorg101098rspb20122909 2013

                                      Meredith M P Murphy E J Hawker E J King JC and Wallace M I On the interannual variability ofocean temperatures around South Georgia Southern OceanForcing by El NintildeoSouthern Oscillation and the South-ern Annular Mode Deep-Sea Res Pt II 55 2007ndash2022httpsdoiorg101016jdsr2200805020 2008

                                      Mo K C Relationships between low-frequency variability inthe Southern Hemisphere and sea surface temperature anoma-lies J Clim 13 3599ndash3610 httpsdoiorg1011751520-0442(2000)013lt3599rblfvigt20co2 2000

                                      Moline M A Claustre H Frazer T K Schofield O andVernet M Alteration of the food web along the Antarc-tic Peninsula in response to a regional warming trend GlobChange Biol 10 1973ndash1980 httpsdoiorg101111j1365-2486200400825x 2004

                                      Moore J K and Abbott M R Phytoplankton chloro-phyll distributions and primary production in the South-ern Ocean J Geophys Res-Ocean 105 28709ndash28722httpsdoiorg1010291999JC000043 2000

                                      Nakagawa S A farewell to Bonferroni the problems of low sta-tistical power and publication bias Behav Ecol 15 1044ndash1045httpsdoiorg101093behecoarh107 2004

                                      Nakagawa S and Cuthill I C Effect size confidence inter-val and statistical significance a practical guide for biolo-gists Biol Rev 82 591ndash605 httpsdoiorg101111j1469-185X200700027x 2007

                                      Nehring S Establishment of thermophilic phytoplankton speciesin the North Sea biological indicators of climatic changesShort communication ICES J Mar Sci 55 818ndash823httpsdoiorg101006jmsc19980389 1998

                                      NOAA Teleconnection Pattern Calculation ProceduresClimate Prediction Center Internet Team available athttpswwwcpcncepnoaagovproductsprecipCWlinkdaily_ao_indexhistorymethodshtmlvar (last access 15 June 2017)2005

                                      NOAA NCEP-DOE Reanalysis 2 data provided by theNOAAOARESRL PSD Boulder Colorado USA available athttpswwwcpcncepnoaagovproductsprecipCWlinkENSOverfnewaaoshtml last access 25 June 2017

                                      OBIS Ocean Biogeographic Information System Intergovernmen-tal Oceanographic Commission of UNESCO available at httpwwwiobisorg last access 18 February 2020

                                      httpsdoiorg105194bg-17-3815-2020 Biogeosciences 17 3815ndash3835 2020

                                      3834 B L Greaves et al SAM influences phytoplankton in SIZ

                                      Ottersen G Planque B Belgrano A Post E ReidP C and Stenseth N C Ecological effects of theNorth Atlantic Oscillation Oecologia 128 1ndash14httpsdoiorg101007s004420100655 2001

                                      Parkinson C L A 40-y record reveals gradual Antarctic sea iceincreases followed by decreases at rates far exceeding the ratesseen in the Arctic P Natl Acad Sci USA 116 14414ndash14423httpsdoiorg101073pnas1906556116 2019

                                      R Core Team R A Language and Environment for Statistical Com-puting R Foundation for Statistical Computing Vienna Austria2016

                                      Rigual-Hernaacutendez A S Trull T W Bray S G Closset Iand Armand L K Seasonal dynamics in diatom and par-ticulate export fluxes to the deep sea in the Australian sec-tor of the southern Antarctic Zone J Mar Syst 142 62ndash74httpsdoiorg101016jjmarsys201410002 2015

                                      Roach L A Smith M M and Dean S M Quantify-ing growth of pancake sea ice floes using images fromdrifting buoys J Geophys Res-Ocean 123 2851ndash2866httpsdoiorg1010022017JC013693 2018

                                      Rodgers J L and Nicewander W A Thirteen Ways toLook at the Correlation Coefficient Am Stat 42 59ndash66httpsdoiorg10108000031305198810475524 1988

                                      Saenz B T and Arrigo K R Annual primary produc-tion in Antarctic sea ice during 2005-2006 from a sea icestate estimate J Geophys Res-Ocean 119 3645ndash3678httpsdoiorg1010022013JC009677 2014

                                      Sarthou G Timmermans K R Blain S and Treacuteguer P Growthphysiology and fate of diatoms in the ocean a review J Sea Res53 25ndash42 httpsdoiorg101016jseares200401007 2005

                                      Savidge G Priddle J Gilpin L C Bathmann U Murphy EJ Owens N J P Pollard R T Turner D R Veth C andBoyd P An assessment of the role of the marginal ice zone inthe carbon cycle of the Southern Ocean Antarct Sci 8 349ndash358 httpsdoiorg101017S0954102096000521 1996

                                      Scheffers B R De Meester L Bridge T C L HoffmannA A Pandolfi J M Corlett R T Butchart S H MPearce-Kelly P Kovacs K M Dudgeon D Pacifici MRondinini C Foden W B Martin T G Mora C Bick-ford D and Watson J E M The broad footprint of climatechange from genes to biomes to people Science 354 aaf7671httpsdoiorg101126scienceaaf7671 2016

                                      Schiermeier Q Atmospheric science fixing the sky Nature 460792ndash795 httpsdoiorg101038460792a 2009

                                      Schluumlter L Lohbeck K T Gutowska M A Groumlger J P Riebe-sell U and Reusch T B H Adaptation of a globally importantcoccolithophore to ocean warming and acidification Nat ClimChange 4 1024ndash1030 httpsdoiorg101038nclimate23792014

                                      Scott F J and Marchant H J (Eds) Antarctic marine protistsAustralian Biological Resources Study Canberra and HobartAustralia 541 pp httpsdoiorg101017s00322474052448192005

                                      Sen Gupta A and England M H Coupled oceanndashatmospherendashiceresponse to variations in the Southern Annular Mode J Clim19 4457ndash4486 httpsdoiorg101175JCLI38431 2006

                                      Smetacek V and Nicol S Polar ocean ecosys-tems in a changing world Nature 437 362ndash368httpsdoiorg101038nature04161 2005

                                      Smetacek V Are declining krill stocks a result of global warmingor of the decimation of the whales in Impacts of global warmingon polar systems Fundacioacuten BBVA edited by Duarte C MBilbao 47ndash83 2008

                                      Solomon S Ivy D J Kinnison D Mills M J Neely R R andSchmidt A Emergence of healing in the Antarctic ozone layerScience 353 269ndash274 httpsdoiorg101126scienceaae00612016

                                      Son S W Tandon N F Polvani L M and Waugh D W Ozonehole and Southern Hemisphere climate change Geophys ResLett 36 1ndash5 httpsdoiorg1010292009GL038671 2009

                                      Soppa M Voumllker C and Bracher A Diatom Phenol-ogy in the Southern Ocean Mean Patterns Trends andthe Role of Climate Oscillations Remote Sens 8 1ndash7httpsdoiorg103390rs8050420 2016

                                      Spreen G Kaleschke L and Heygster G Sea ice remote sensingusing AMSR-E 89-GHz channels J Geophys Res-Ocean 113C02S03 httpsdoiorg1010292005JC003384 2008

                                      Squire V A Ocean wave interactions with sea icea reappraisal Annu Rev Fluid Mech 52 37ndash60httpsdoiorg101146annurev-fluid-010719-060301 2020

                                      Steinacher M Joos F Froumllicher T L Bopp L Cadule PCocco V Doney S C Gehlen M Lindsay K Moore J KSchneider B and Segschneider J Projected 21st century de-crease in marine productivity a multi-model analysis Biogeo-sciences 7 979ndash1005 httpsdoiorg105194bg-7-979-20102010

                                      Swart N C and Fyfe J C Observed and simulated changes inthe Southern Hemisphere surface westerly wind-stress GeophysRes Lett 39 1ndash6 httpsdoiorg1010292012GL0528102012

                                      Swart N C Fyfe J C Gillett N and Marshall G J Compar-ing Trends in the Southern Annular Mode and Surface WesterlyJet J Clim 28 8840ndash8859 httpsdoiorg101175JCLI-D-15-03341 2015

                                      Swiło M Majewski W Minzoni R T and Ander-son J B Diatom assemblages from coastal settingsof West Antarctica Mar Micropaleontol 125 95ndash109httpsdoiorg101016jmarmicro201604001 2016

                                      Takahashi T Sutherland S C Wanninkhof R Sweeney CFeely R A Chipman D W Hales B Friederich G ChavezF Sabine C Watson A Bakker D C E Schuster U MetzlN Yoshikawa-Inoue H Ishii M Midorikawa T Nojiri YKoumlrtzinger A Steinhoff T Hoppema M Olafsson J Arnar-son T S Tilbrook B Johannessen T Olsen A Bellerby RWong C S Delille B Bates N R and de Baar H J W Cli-matological mean and decadal change in surface ocean pCO2and net seandashair CO2 flux over the global oceans Deep-Sea ResPt II 56 554ndash577 httpsdoiorg101016jdsr22008120092009

                                      Taljaard J J Development Distribution and Move-ment of Cyclones and Anticyclones in the South-ern Hemisphere During the IGY J Appl Me-teorol 6 973ndash987 httpsdoiorg1011751520-0450(1967)006lt0973DDAMOCgt20CO2 1967

                                      Taylor F and Sjunneskog C Postglacial marine diatom recordof the Palmer Deep Antarctic Peninsula (ODP Leg 178 Site1098) 2 Diatom assemblages Paleoceanography 17 1ndash12httpsdoiorg1010292000PA000564 2002

                                      Biogeosciences 17 3815ndash3835 2020 httpsdoiorg105194bg-17-3815-2020

                                      B L Greaves et al SAM influences phytoplankton in SIZ 3835

                                      Ter Braak C J and Verdonschot P F Canonical correspondenceanalysis and related multivariate methods in aquatic ecologyAquat Sci 57 255ndash289 httpsdoiorg101007BF008774301995

                                      Thompson D W Lee S and Baldwin M P Atmospheric pro-cesses governing the northern hemisphere annular modeNorthAtlantic oscillation Geoph Monog Series 134 81ndash112 2003

                                      Thompson D W Solomon S Kushner P J England M HGrise K M and Karoly D J Signatures of the Antarcticozone hole in Southern Hemisphere surface climate change NatGeosci 4 741ndash749 2011

                                      Thompson D W J and Solomon S Interpretation of RecentSouthern Hemisphere Climate Change Science 296 895ndash899httpsdoiorg101126science1069270 2002

                                      Tomas C R (Ed) Identifying marine phytoplankton Academicpress San Diego California 858 pp 1997

                                      Turner J Bracegirdle T J Phillips T Marshall G J and Hosk-ing J S An initial assessment of Antarctic sea ice extent in theCMIP5 models J Clim 26 1473ndash1484 2013

                                      Turner J Summerhayes C Sparrow M Mayewski P ConveyP di Prisco G Gutt J Hodgson D Speich S Worby TBo S and Klepikov A Antarctic climate change and the envi-ronment ndash 2015 update Antarctic Treaty Consultative MeetingSofia Bulgaria June 2015 IP 92 2015

                                      Waters R L Van Den Enden R and Marchant H J Summer mi-crobial ecology off East Antarctica (80ndash150 E) protistan com-munity structure and bacterial abundance Deep-Sea Res Pt II47 2401ndash2435 httpsdoiorg101016S0967-0645(00)00030-8 2000

                                      Webb T and Bryson R A Late-and postglacial climatic changein the northern Midwest USA quantitative estimates derivedfrom fossil pollen spectra by multivariate statistical analy-sis Quaternary Res 2 70ndash115 httpsdoiorg1010160033-5894(72)90005-1 1972

                                      Whitaker D and Christman M clustsig Significant Cluster Anal-ysis R package version 11 2014

                                      Wilson D L Smith Jr W O and Nelson D M Phytoplanktonbloom dynamics of the western Ross Sea ice edge ndash I Primaryproductivity and species-specific production Deep-Sea Res PtI 33 1375ndash1387 httpsdoiorg1010160198-0149(86)90041-5 1986

                                      Wright S W van den Enden R L Pearce I David-son A T Scott F J and Westwood K J Phyto-plankton community structure and stocks in the SouthernOcean (30ndash80 E) determined by CHEMTAX analysis ofHPLC pigment signatures Deep-Sea Res Pt II 57 758ndash778httpsdoiorg101016jdsr2200906015 2010

                                      httpsdoiorg105194bg-17-3815-2020 Biogeosciences 17 3815ndash3835 2020

                                      • Abstract
                                      • Introduction
                                        • Importance of the SIZ phytoplankton bloom
                                        • The Southern Annular Mode
                                        • The hypothesis
                                          • Methods
                                            • Phytoplankton relative abundance
                                            • Environmental covariates
                                            • Statistical analysis
                                              • Results
                                                • The influence of the SAM on phytoplankton community composition
                                                • Influence of the SAM on phytoplankton productivity
                                                • Observed occurrence and abundance
                                                  • Discussion
                                                    • The SAM and phytoplankton community composition
                                                    • Effect of the SAM on phytoplankton taxa
                                                    • The effects of the SAM on productivity and biomass
                                                    • Implications
                                                      • Conclusions
                                                      • Data availability
                                                      • Supplement
                                                      • Author contributions
                                                      • Competing interests
                                                      • Acknowledgements
                                                      • Financial support
                                                      • Review statement
                                                      • References

                                        3834 B L Greaves et al SAM influences phytoplankton in SIZ

                                        Ottersen G Planque B Belgrano A Post E ReidP C and Stenseth N C Ecological effects of theNorth Atlantic Oscillation Oecologia 128 1ndash14httpsdoiorg101007s004420100655 2001

                                        Parkinson C L A 40-y record reveals gradual Antarctic sea iceincreases followed by decreases at rates far exceeding the ratesseen in the Arctic P Natl Acad Sci USA 116 14414ndash14423httpsdoiorg101073pnas1906556116 2019

                                        R Core Team R A Language and Environment for Statistical Com-puting R Foundation for Statistical Computing Vienna Austria2016

                                        Rigual-Hernaacutendez A S Trull T W Bray S G Closset Iand Armand L K Seasonal dynamics in diatom and par-ticulate export fluxes to the deep sea in the Australian sec-tor of the southern Antarctic Zone J Mar Syst 142 62ndash74httpsdoiorg101016jjmarsys201410002 2015

                                        Roach L A Smith M M and Dean S M Quantify-ing growth of pancake sea ice floes using images fromdrifting buoys J Geophys Res-Ocean 123 2851ndash2866httpsdoiorg1010022017JC013693 2018

                                        Rodgers J L and Nicewander W A Thirteen Ways toLook at the Correlation Coefficient Am Stat 42 59ndash66httpsdoiorg10108000031305198810475524 1988

                                        Saenz B T and Arrigo K R Annual primary produc-tion in Antarctic sea ice during 2005-2006 from a sea icestate estimate J Geophys Res-Ocean 119 3645ndash3678httpsdoiorg1010022013JC009677 2014

                                        Sarthou G Timmermans K R Blain S and Treacuteguer P Growthphysiology and fate of diatoms in the ocean a review J Sea Res53 25ndash42 httpsdoiorg101016jseares200401007 2005

                                        Savidge G Priddle J Gilpin L C Bathmann U Murphy EJ Owens N J P Pollard R T Turner D R Veth C andBoyd P An assessment of the role of the marginal ice zone inthe carbon cycle of the Southern Ocean Antarct Sci 8 349ndash358 httpsdoiorg101017S0954102096000521 1996

                                        Scheffers B R De Meester L Bridge T C L HoffmannA A Pandolfi J M Corlett R T Butchart S H MPearce-Kelly P Kovacs K M Dudgeon D Pacifici MRondinini C Foden W B Martin T G Mora C Bick-ford D and Watson J E M The broad footprint of climatechange from genes to biomes to people Science 354 aaf7671httpsdoiorg101126scienceaaf7671 2016

                                        Schiermeier Q Atmospheric science fixing the sky Nature 460792ndash795 httpsdoiorg101038460792a 2009

                                        Schluumlter L Lohbeck K T Gutowska M A Groumlger J P Riebe-sell U and Reusch T B H Adaptation of a globally importantcoccolithophore to ocean warming and acidification Nat ClimChange 4 1024ndash1030 httpsdoiorg101038nclimate23792014

                                        Scott F J and Marchant H J (Eds) Antarctic marine protistsAustralian Biological Resources Study Canberra and HobartAustralia 541 pp httpsdoiorg101017s00322474052448192005

                                        Sen Gupta A and England M H Coupled oceanndashatmospherendashiceresponse to variations in the Southern Annular Mode J Clim19 4457ndash4486 httpsdoiorg101175JCLI38431 2006

                                        Smetacek V and Nicol S Polar ocean ecosys-tems in a changing world Nature 437 362ndash368httpsdoiorg101038nature04161 2005

                                        Smetacek V Are declining krill stocks a result of global warmingor of the decimation of the whales in Impacts of global warmingon polar systems Fundacioacuten BBVA edited by Duarte C MBilbao 47ndash83 2008

                                        Solomon S Ivy D J Kinnison D Mills M J Neely R R andSchmidt A Emergence of healing in the Antarctic ozone layerScience 353 269ndash274 httpsdoiorg101126scienceaae00612016

                                        Son S W Tandon N F Polvani L M and Waugh D W Ozonehole and Southern Hemisphere climate change Geophys ResLett 36 1ndash5 httpsdoiorg1010292009GL038671 2009

                                        Soppa M Voumllker C and Bracher A Diatom Phenol-ogy in the Southern Ocean Mean Patterns Trends andthe Role of Climate Oscillations Remote Sens 8 1ndash7httpsdoiorg103390rs8050420 2016

                                        Spreen G Kaleschke L and Heygster G Sea ice remote sensingusing AMSR-E 89-GHz channels J Geophys Res-Ocean 113C02S03 httpsdoiorg1010292005JC003384 2008

                                        Squire V A Ocean wave interactions with sea icea reappraisal Annu Rev Fluid Mech 52 37ndash60httpsdoiorg101146annurev-fluid-010719-060301 2020

                                        Steinacher M Joos F Froumllicher T L Bopp L Cadule PCocco V Doney S C Gehlen M Lindsay K Moore J KSchneider B and Segschneider J Projected 21st century de-crease in marine productivity a multi-model analysis Biogeo-sciences 7 979ndash1005 httpsdoiorg105194bg-7-979-20102010

                                        Swart N C and Fyfe J C Observed and simulated changes inthe Southern Hemisphere surface westerly wind-stress GeophysRes Lett 39 1ndash6 httpsdoiorg1010292012GL0528102012

                                        Swart N C Fyfe J C Gillett N and Marshall G J Compar-ing Trends in the Southern Annular Mode and Surface WesterlyJet J Clim 28 8840ndash8859 httpsdoiorg101175JCLI-D-15-03341 2015

                                        Swiło M Majewski W Minzoni R T and Ander-son J B Diatom assemblages from coastal settingsof West Antarctica Mar Micropaleontol 125 95ndash109httpsdoiorg101016jmarmicro201604001 2016

                                        Takahashi T Sutherland S C Wanninkhof R Sweeney CFeely R A Chipman D W Hales B Friederich G ChavezF Sabine C Watson A Bakker D C E Schuster U MetzlN Yoshikawa-Inoue H Ishii M Midorikawa T Nojiri YKoumlrtzinger A Steinhoff T Hoppema M Olafsson J Arnar-son T S Tilbrook B Johannessen T Olsen A Bellerby RWong C S Delille B Bates N R and de Baar H J W Cli-matological mean and decadal change in surface ocean pCO2and net seandashair CO2 flux over the global oceans Deep-Sea ResPt II 56 554ndash577 httpsdoiorg101016jdsr22008120092009

                                        Taljaard J J Development Distribution and Move-ment of Cyclones and Anticyclones in the South-ern Hemisphere During the IGY J Appl Me-teorol 6 973ndash987 httpsdoiorg1011751520-0450(1967)006lt0973DDAMOCgt20CO2 1967

                                        Taylor F and Sjunneskog C Postglacial marine diatom recordof the Palmer Deep Antarctic Peninsula (ODP Leg 178 Site1098) 2 Diatom assemblages Paleoceanography 17 1ndash12httpsdoiorg1010292000PA000564 2002

                                        Biogeosciences 17 3815ndash3835 2020 httpsdoiorg105194bg-17-3815-2020

                                        B L Greaves et al SAM influences phytoplankton in SIZ 3835

                                        Ter Braak C J and Verdonschot P F Canonical correspondenceanalysis and related multivariate methods in aquatic ecologyAquat Sci 57 255ndash289 httpsdoiorg101007BF008774301995

                                        Thompson D W Lee S and Baldwin M P Atmospheric pro-cesses governing the northern hemisphere annular modeNorthAtlantic oscillation Geoph Monog Series 134 81ndash112 2003

                                        Thompson D W Solomon S Kushner P J England M HGrise K M and Karoly D J Signatures of the Antarcticozone hole in Southern Hemisphere surface climate change NatGeosci 4 741ndash749 2011

                                        Thompson D W J and Solomon S Interpretation of RecentSouthern Hemisphere Climate Change Science 296 895ndash899httpsdoiorg101126science1069270 2002

                                        Tomas C R (Ed) Identifying marine phytoplankton Academicpress San Diego California 858 pp 1997

                                        Turner J Bracegirdle T J Phillips T Marshall G J and Hosk-ing J S An initial assessment of Antarctic sea ice extent in theCMIP5 models J Clim 26 1473ndash1484 2013

                                        Turner J Summerhayes C Sparrow M Mayewski P ConveyP di Prisco G Gutt J Hodgson D Speich S Worby TBo S and Klepikov A Antarctic climate change and the envi-ronment ndash 2015 update Antarctic Treaty Consultative MeetingSofia Bulgaria June 2015 IP 92 2015

                                        Waters R L Van Den Enden R and Marchant H J Summer mi-crobial ecology off East Antarctica (80ndash150 E) protistan com-munity structure and bacterial abundance Deep-Sea Res Pt II47 2401ndash2435 httpsdoiorg101016S0967-0645(00)00030-8 2000

                                        Webb T and Bryson R A Late-and postglacial climatic changein the northern Midwest USA quantitative estimates derivedfrom fossil pollen spectra by multivariate statistical analy-sis Quaternary Res 2 70ndash115 httpsdoiorg1010160033-5894(72)90005-1 1972

                                        Whitaker D and Christman M clustsig Significant Cluster Anal-ysis R package version 11 2014

                                        Wilson D L Smith Jr W O and Nelson D M Phytoplanktonbloom dynamics of the western Ross Sea ice edge ndash I Primaryproductivity and species-specific production Deep-Sea Res PtI 33 1375ndash1387 httpsdoiorg1010160198-0149(86)90041-5 1986

                                        Wright S W van den Enden R L Pearce I David-son A T Scott F J and Westwood K J Phyto-plankton community structure and stocks in the SouthernOcean (30ndash80 E) determined by CHEMTAX analysis ofHPLC pigment signatures Deep-Sea Res Pt II 57 758ndash778httpsdoiorg101016jdsr2200906015 2010

                                        httpsdoiorg105194bg-17-3815-2020 Biogeosciences 17 3815ndash3835 2020

                                        • Abstract
                                        • Introduction
                                          • Importance of the SIZ phytoplankton bloom
                                          • The Southern Annular Mode
                                          • The hypothesis
                                            • Methods
                                              • Phytoplankton relative abundance
                                              • Environmental covariates
                                              • Statistical analysis
                                                • Results
                                                  • The influence of the SAM on phytoplankton community composition
                                                  • Influence of the SAM on phytoplankton productivity
                                                  • Observed occurrence and abundance
                                                    • Discussion
                                                      • The SAM and phytoplankton community composition
                                                      • Effect of the SAM on phytoplankton taxa
                                                      • The effects of the SAM on productivity and biomass
                                                      • Implications
                                                        • Conclusions
                                                        • Data availability
                                                        • Supplement
                                                        • Author contributions
                                                        • Competing interests
                                                        • Acknowledgements
                                                        • Financial support
                                                        • Review statement
                                                        • References

                                          B L Greaves et al SAM influences phytoplankton in SIZ 3835

                                          Ter Braak C J and Verdonschot P F Canonical correspondenceanalysis and related multivariate methods in aquatic ecologyAquat Sci 57 255ndash289 httpsdoiorg101007BF008774301995

                                          Thompson D W Lee S and Baldwin M P Atmospheric pro-cesses governing the northern hemisphere annular modeNorthAtlantic oscillation Geoph Monog Series 134 81ndash112 2003

                                          Thompson D W Solomon S Kushner P J England M HGrise K M and Karoly D J Signatures of the Antarcticozone hole in Southern Hemisphere surface climate change NatGeosci 4 741ndash749 2011

                                          Thompson D W J and Solomon S Interpretation of RecentSouthern Hemisphere Climate Change Science 296 895ndash899httpsdoiorg101126science1069270 2002

                                          Tomas C R (Ed) Identifying marine phytoplankton Academicpress San Diego California 858 pp 1997

                                          Turner J Bracegirdle T J Phillips T Marshall G J and Hosk-ing J S An initial assessment of Antarctic sea ice extent in theCMIP5 models J Clim 26 1473ndash1484 2013

                                          Turner J Summerhayes C Sparrow M Mayewski P ConveyP di Prisco G Gutt J Hodgson D Speich S Worby TBo S and Klepikov A Antarctic climate change and the envi-ronment ndash 2015 update Antarctic Treaty Consultative MeetingSofia Bulgaria June 2015 IP 92 2015

                                          Waters R L Van Den Enden R and Marchant H J Summer mi-crobial ecology off East Antarctica (80ndash150 E) protistan com-munity structure and bacterial abundance Deep-Sea Res Pt II47 2401ndash2435 httpsdoiorg101016S0967-0645(00)00030-8 2000

                                          Webb T and Bryson R A Late-and postglacial climatic changein the northern Midwest USA quantitative estimates derivedfrom fossil pollen spectra by multivariate statistical analy-sis Quaternary Res 2 70ndash115 httpsdoiorg1010160033-5894(72)90005-1 1972

                                          Whitaker D and Christman M clustsig Significant Cluster Anal-ysis R package version 11 2014

                                          Wilson D L Smith Jr W O and Nelson D M Phytoplanktonbloom dynamics of the western Ross Sea ice edge ndash I Primaryproductivity and species-specific production Deep-Sea Res PtI 33 1375ndash1387 httpsdoiorg1010160198-0149(86)90041-5 1986

                                          Wright S W van den Enden R L Pearce I David-son A T Scott F J and Westwood K J Phyto-plankton community structure and stocks in the SouthernOcean (30ndash80 E) determined by CHEMTAX analysis ofHPLC pigment signatures Deep-Sea Res Pt II 57 758ndash778httpsdoiorg101016jdsr2200906015 2010

                                          httpsdoiorg105194bg-17-3815-2020 Biogeosciences 17 3815ndash3835 2020

                                          • Abstract
                                          • Introduction
                                            • Importance of the SIZ phytoplankton bloom
                                            • The Southern Annular Mode
                                            • The hypothesis
                                              • Methods
                                                • Phytoplankton relative abundance
                                                • Environmental covariates
                                                • Statistical analysis
                                                  • Results
                                                    • The influence of the SAM on phytoplankton community composition
                                                    • Influence of the SAM on phytoplankton productivity
                                                    • Observed occurrence and abundance
                                                      • Discussion
                                                        • The SAM and phytoplankton community composition
                                                        • Effect of the SAM on phytoplankton taxa
                                                        • The effects of the SAM on productivity and biomass
                                                        • Implications
                                                          • Conclusions
                                                          • Data availability
                                                          • Supplement
                                                          • Author contributions
                                                          • Competing interests
                                                          • Acknowledgements
                                                          • Financial support
                                                          • Review statement
                                                          • References

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