Table of TCGA Cancer Codes · Table of TCGA Cancer Codes ! TCGA code Cancer type Number* ... LUSC Lung squamous cell carcinoma 178 OV Ovarian serous cystadenocarcinoma 469 ... PRAD

Table of TCGA Cancer Codes  TCGA code

Cancer type Number*

ACC Adrenocortical carcinoma 90 BLCA Bladder urothelial carcinoma 396 BRCA Breast invasive carcinoma 988 CESC Cervical squamous cell carcinoma and endocervical

adenocarcinoma 194

CHOL Cholangiocarcinoma (bile duct) 35 COAD Colon adenocarcinoma 367 DLBC Lymphoid neoplasm diffuse large B−cell lymphoma 48 ESCA Esophageal carcinoma 185 GBM Glioblastoma multiforme 290 HNSC Head and neck squamous cell carcinoma 513 KICH Kidney chromophobe 66 KIRC Kidney renal clear cell carcinoma 451 KIRP Kidney renal papillary cell carcinoma 282 LAML Acute myeloid leukemia 197 LGG Brain lower grade glioma 533 LIHC Liver hepatocellular carcinoma 373 LUAD Lung adenocarcinoma 546 LUSC Lung squamous cell carcinoma 178 OV Ovarian serous cystadenocarcinoma 469 PAAD Pancreatic adenocarcinoma 185 PCPG Pheochromocytoma and paraganglioma (adrenal gland) 184 PRAD Prostate adenocarcinoma 499 READ Rectum adenocarcinoma 122 SARC Sarcoma 247 SKCM Skin cutaneous melanoma 371 STAD Stomach adenocarcinoma 395 TGCT Testicular germ cell tumors 155 THCA Thyroid carcinoma 504 THYM Thymoma 123 UCEC Uterine corpus endometrial carcinoma 248 UCS Uterine carcinosarcoma 57 UVM Uveal melanoma 8  *Number  of  samples  with  mutation  data  

G13

D

Q61

H

G12

R

L19F

G12

C

G12

V

G12

D

KRAS mutant alleles in bladder urothelial carcinoma (N=396)0

12

34

5

NbrSamples=396 Mutant Samples=13 Total Mutations=13

G13

Q61 L1

9

G12

KRAS mutant positions in bladder urothelial carcinoma (N=396)0

24

68

10

NbrSamples=396 Mutant Samples=13 Total Mutations=13

D92

Y

G12

C

G12

D

G12

V

KRAS mutant alleles in breast invasive carcinoma (N=988)0.

00.

51.

01.

52.

02.

53.

0

NbrSamples=988 Mutant Samples=6 Total Mutations=6

D92

G12

KRAS mutant positions in breast invasive carcinoma (N=988)0

12

34

5

NbrSamples=988 Mutant Samples=6 Total Mutations=6

A14

6T

G12

C

I21R

G13

D

G12

V

G12

D

KRAS mutant alleles in cervical squamous cell carcinoma and endocervical adenocarcinoma (N=194)

01

23

4

NbrSamples=194 Mutant Samples=11 Total Mutations=11

A14

6

I21

G13

G12

KRAS mutant positions in cervical squamous cell carcinoma and endocervical adenocarcinoma (N=194)

01

23

45

67

NbrSamples=194 Mutant Samples=11 Total Mutations=11

A14

6VR

68G

A14

6GL1

9FV

8AV

14G

Y71

CQ

61P

I24V

K11

7EQ

61H

D69

GK

5RS

17G

M72

VG

12R

Q61

KK

117N

G12

SG

12A

G12

CA

146T

G13

DG

12V

G12

D

KRAS mutant alleles in colon adenocarcinoma (N=367), top 250

1020

3040

NbrSamples=367 Mutant Samples=168 Total Mutations=182(21 not shown)

C80

D92

T20

E63

G10 V

9H

27E

62P

34 L19

V8

Y71 I2

4D

69 K5

R68

S17

Q22

M72

V14

K11

7Q

61A

146

G13

G12

KRAS mutant positions in colon adenocarcinoma (N=367), top 250

2040

6080

NbrSamples=367 Mutant Samples=168 Total Mutations=182 (2 not shown)

G12

V

G12

D

KRAS mutant alleles in kidney renal papillary cell carcinoma (N=282)0.

00.

51.

01.

52.

02.

53.

0

NbrSamples=282 Mutant Samples=5 Total Mutations=5

G12

KRAS mutant positions in kidney renal papillary cell carcinoma (N=282)0

12

34

5

NbrSamples=282 Mutant Samples=5 Total Mutations=5

Q61

H

G12

V

A59

E

I36M

A14

6T

G13

D

G12

D

KRAS mutant alleles in acute myeloid leukemia (N=197)0.

00.

51.

01.

52.

0

NbrSamples=197 Mutant Samples=8 Total Mutations=8

Q61

A59 I3

6

A14

6

G13

G12

KRAS mutant positions in acute myeloid leukemia (N=197)0.

00.

51.

01.

52.

02.

53.

0

NbrSamples=197 Mutant Samples=8 Total Mutations=8

G12

C

R16

1G

G13

D

R68

M

G12

D

KRAS mutant alleles in liver hepatocellular carcinoma (N=373)0.

00.

51.

01.

52.

0

NbrSamples=373 Mutant Samples=6 Total Mutations=6

R16

1

G13

R68

G12

KRAS mutant positions in liver hepatocellular carcinoma (N=373)0.

00.

51.

01.

52.

02.

53.

0

NbrSamples=373 Mutant Samples=6 Total Mutations=6

K88

*

Q61

H

A14

6P

D33

E

G12

R

Q61

E

G13

D

Q61

L

L19F

G12

S

G13

C

G12

A

G12

D

G12

V

G12

C

KRAS mutant alleles in lung adenocarcinoma (N=546)0

1020

3040

5060

NbrSamples=546 Mutant Samples=164 Total Mutations=169

K88

A14

6

D33 L1

9

Q61

G13

G12

KRAS mutant positions in lung adenocarcinoma (N=546)0

2040

6080

100

120

140

NbrSamples=546 Mutant Samples=164 Total Mutations=169

G12

R

G12

V

KRAS mutant alleles in ovarian serous cystadenocarcinoma (N=469)0

12

34

NbrSamples=469 Mutant Samples=5 Total Mutations=5

G12

KRAS mutant positions in ovarian serous cystadenocarcinoma (N=469)0

12

34

5

NbrSamples=469 Mutant Samples=5 Total Mutations=5

G12

S

G12

C

Q61

R

Q61

H

G12

R

G12

V

G12

D

KRAS mutant alleles in pancreatic adenocarcinoma (N=185)0

1020

3040

5060

NbrSamples=185 Mutant Samples=140 Total Mutations=143

Q61

G12

KRAS mutant positions in pancreatic adenocarcinoma (N=185)0

2040

6080

100

120

NbrSamples=185 Mutant Samples=140 Total Mutations=143

A14

6V

Q61

H

K11

7N

E98

*

G12

F

Q22

K

Q61

L

12_1

2G>

GA

G

A59

T

M72

T

V9I

G12

A

G12

S

G12

C

A14

6T

G13

D

G12

D

G12

V

KRAS mutant alleles in rectum adenocarcinoma (N=122)0

24

68

1012

14

NbrSamples=122 Mutant Samples=63 Total Mutations=63

K11

7

E98

Q22

12_1

2G>

GA

G

A59

M72 V

9

Q61

A14

6

G13

G12

KRAS mutant positions in rectum adenocarcinoma (N=122)0

510

1520

2530

35

NbrSamples=122 Mutant Samples=63 Total Mutations=63

G12

R

Q61

K

Q61

R

E62

K

K11

7N

G13

D

G12

D

KRAS mutant alleles in skin cutaneous melanoma (N=371)0.

00.

51.

01.

52.

0

NbrSamples=371 Mutant Samples=7 Total Mutations=8

E62

K11

7

G13

Q61

G12

KRAS mutant positions in skin cutaneous melanoma (N=371)0.

00.

51.

01.

52.

02.

53.

0

NbrSamples=371 Mutant Samples=7 Total Mutations=8

R13

5T

G12

C

Q61

H

A14

6T

G12

V

G12

S

G12

D

G13

D

KRAS mutant alleles in stomach adenocarcinoma (N=395)0

24

68

1012

NbrSamples=395 Mutant Samples=37 Total Mutations=37

R13

5

Q61

A14

6

G13

G12

KRAS mutant positions in stomach adenocarcinoma (N=395)0

510

15

NbrSamples=395 Mutant Samples=37 Total Mutations=37

E63

K

G12

S

A14

6P

A14

6V

Q61

L

G12

A

Q61

H

G12

R

A14

6T

G12

V

Q61

R

KRAS mutant alleles in testicular germ cell tumors (N=155)0.

00.

51.

01.

52.

02.

53.

0

NbrSamples=155 Mutant Samples=20 Total Mutations=20

E63

A14

6

Q61

G12

KRAS mutant positions in testicular germ cell tumors (N=155)0

24

68

NbrSamples=155 Mutant Samples=20 Total Mutations=20

Q61

R

G12

V

Q61

K

KRAS mutant alleles in thyroid carcinoma (N=504)0.

00.

51.

01.

52.

0

NbrSamples=504 Mutant Samples=5 Total Mutations=5

G12

Q61

KRAS mutant positions in thyroid carcinoma (N=504)0.

00.

51.

01.

52.

02.

53.

0

NbrSamples=504 Mutant Samples=5 Total Mutations=5

P11

0S

K17

6Q

Q61

L

G12

S

T20

R

G13

C

G13

V

R16

4Q

Q61

H

G12

C

G12

A

G13

D

G12

V

G12

D

KRAS mutant alleles in uterine corpus endometrial carcinoma (N=248)0

510

15

NbrSamples=248 Mutant Samples=52 Total Mutations=52

P11

0

K17

6

T20

R16

4

Q61

G13

G12

KRAS mutant positions in uterine corpus endometrial carcinoma (N=248)0

510

1520

2530

35

NbrSamples=248 Mutant Samples=52 Total Mutations=52

G12

C

G12

A

G12

D

G12

V

KRAS mutant alleles in uterine carcinosarcoma (N=248)0.

00.

51.

01.

52.

02.

53.

0

NbrSamples=57 Mutant Samples=7 Total Mutations=7

G12

KRAS mutant positions in uterine carcinosarcoma (N=248)0

12

34

56

7

NbrSamples=57 Mutant Samples=7 Total Mutations=7

V14

I

V8A

V9F V9I

Y71

C

A14

6P

E63

K

M72

T

A14

6V

K11

7N

Q22

K

G13

C

L19F

Q61

K

Q61

L

Q61

R

A14

6T

G12

A

G12

S

G12

R

G13

D

G12

C

Q61

H

G12

V

G12

D

Number of cancer types where each KRAS mutation occurs, top 250

510

15

48 not shown

R13

5

R16

1

R16

4

T15

8

T35

V14 V8

Y71

D92

E62

E63 K5

M72

R68

S17

T20 V

9

A59

K11

7

Q22 L1

9

A14

6

G13

Q61

G12

Number of cancer types where each KRAS mutation position occurs, top 250

510

1520

16 not shown

R16

4Q

D69

G

K5R

E63

K

M72

T

S17

G

M72

V

A14

6P

Q22

K

A14

6V

L19F

K11

7N

Q61

K

Q61

R

Q61

L

G13

C

G12

S

Q61

H

A14

6T

G12

A

G12

R

G13

D

G12

C

G12

V

G12

D

Number of times each KRAS mutation occurs across all cancer types, top 250

5010

015

0

48 not shown

E98

12_1

2G>

GA

G

R13

5

P11

0

K17

6

R16

4

D92

D69

T20

E63 V9

E62 K5

R68

S17

V14

A59

M72

Q22 L1

9

K11

7

A14

6

Q61

G13

G12

Number of times each KRAS mutation position occurs across all cancer types, top 250

100

200

300

400

500

16 not shown

CH

OL

DLB

CLG

GT

HY

ME

SC

AG

BM

PR

AD

TH

CA

LAM

LLI

HC

SK

CM

BR

CA

KIR

PO

VC

ES

CU

CS

TG

CT

BLC

AS

TAD

UC

EC

RE

AD

CO

AD

PAA

DLU

AD

Total number of KRAS G12 mutations in different cancer types0

2040

6080

100

120

140

CH

OL

DLB

CLG

GT

HY

ME

SC

AG

BM

PR

AD

TH

CA

LAM

LLI

HC

SK

CM

BR

CA

KIR

PO

VC

ES

CU

CS

TG

CT

BLC

AS

TAD

UC

EC

RE

AD

CO

AD

PAA

DLU

AD

Mutated allele breakdown for KRAS G12 mutations0

2040

6080

100

120

140 G12D

G12CG12VG12RG12SG12AG12F

CH

OL

DLB

CLG

GT

HY

ME

SC

AG

BM

PR

AD

TH

CA

LAM

LLI

HC

SK

CM

BR

CA

KIR

PO

VC

ES

CU

CS

TG

CT

BLC

AS

TAD

UC

EC

RE

AD

CO

AD

PAA

DLU

AD All

0.0

0.2

0.4

0.6

0.8

1.0

Proportional View of Allele Breakdown of KRAS G12 Mutations 1 1 1 1 2 2 2 2 3 3 3 5 5 5 7 7 8 10 19 36 38 96 135149541

G12DG12CG12VG12RG12SG12AG12F

BLC

A

LAM

L

LIH

C

SA

RC

SK

CM

CE

SC

LUA

D

UC

EC

RE

AD

STA

D

CO

AD

Total number of KRAS G13 mutations in different cancer types0

510

1520

25

BLC

A

LAM

L

LIH

C

SA

RC

SK

CM

CE

SC

LUA

D

UC

EC

RE

AD

STA

D

CO

AD

Mutated allele breakdown for KRAS G13 mutations0

510

1520

25 G13DG13SG13CG13V

BLC

A

LAM

L

LIH

C

SA

RC

SK

CM

CE

SC

LUA

D

UC

EC

RE

AD

STA

D

CO

AD All

Proportional view of allele breakdown of KRAS G13 mutations0.

00.

20.

40.

60.

81.

0 1 1 1 1 1 2 9 9 11 12 26 74

G13DG13SG13CG13V

BLC

A

CH

OL

ES

CA

LAM

L

LUS

C

SA

RC

RE

AD

SK

CM

STA

D

TH

CA

UC

EC

LUA

D

TG

CT

PAA

D

CO

AD

Total number of KRAS Q61 mutations in different cancer types0

24

68

BLC

A

CH

OL

ES

CA

LAM

L

LUS

C

SA

RC

RE

AD

SK

CM

STA

D

TH

CA

UC

EC

LUA

D

TG

CT

PAA

D

CO

AD

Mutated allele breakdown for KRAS Q61 mutations0

24

68

Q61HQ61KQ61RQ61LQ61PQ61E

BLC

A

CH

OL

ES

CA

LAM

L

LUS

C

SA

RC

RE

AD

SK

CM

STA

D

TH

CA

UC

EC

LUA

D

TG

CT

PAA

D

CO

AD All

Proportional view of allele breakdown of KRAS Q61 mutations0.

00.

20.

40.

60.

81.

0 1 1 1 1 1 1 2 2 2 3 3 5 7 8 9 47

Q61HQ61KQ61RQ61LQ61PQ61E

CE

SC

LAM

L

LUA

D

STA

D

TG

CT

RE

AD

CO

AD

Total number of KRAS A146 mutations in different cancer types0

24

68

1012

14

CE

SC

LAM

L

LUA

D

STA

D

TG

CT

RE

AD

CO

AD

Mutated allele breakdown for KRAS A146 mutations0

24

68

1012

14

A146TA146VA146GA146P

CE

SC

LAM

L

LUA

D

STA

D

TG

CT

RE

AD

CO

AD All

Proportional view of allele breakdown of KRAS A146 mutations0.

00.

20.

40.

60.

81.

0 1 1 1 3 4 5 15 30

A146TA146VA146GA146P

RE

AD

SK

CM

CO

AD

Total number of KRAS K117 mutations in different cancer types0

12

34

5

RE

AD

SK

CM

CO

AD

Mutated allele breakdown for KRAS K117 mutations0

12

34

5

K117NK117E

RE

AD

SK

CM

CO

AD All

Proportional view of allele breakdown of KRAS K117 mutations0.

00.

20.

40.

60.

81.

0 1 1 5 7

K117NK117E

DLB

CLG

GLU

SC

TH

YM

CH

OL

GB

MP

RA

DS

AR

CE

SC

ALI

HC

BR

CA

KIR

PO

VT

HC

ALA

ML

SK

CM

UC

SC

ES

CB

LCA

TG

CT

STA

DU

CE

CR

EA

DPA

AD

CO

AD

LUA

D

Positional breakdown of KRAS mutations across cancer types0

5010

015

0 G12G13Q61A146K117

DLB

CLG

GLU

SC

TH

YM

CH

OL

GB

MP

RA

DS

AR

CE

SC

ALI

HC

BR

CA

KIR

PO

VT

HC

ALA

ML

SK

CM

UC

SC

ES

CB

LCA

TG

CT

STA

DU

CE

CR

EA

DPA

AD

CO

AD

LUA

D All

Proportional Position Breakdown of KRAS Mutations0.

00.

20.

40.

60.

81.

0 1 1 1 1 2 2 2 2 3 4 5 5 5 5 6 7 7 10 12 19 36 48 57 143

151

164

699

G12G13Q61A146K117