1.Protein interactionsLars Juhl Jensen2. what is an interaction? 3. physical interaction 4. functional association 5. fuzzy definitions 6. physical interactions 7. stable…

1.Networks of proteins and diseases Lars Juhl Jensen 2. sequence analysis 3. protein networks 4. de Lichtenberg, Jensen et al., Science, 2005 5. adverse drug reactions 6.…

1.Network biology Lars Juhl Jensen 2. three parts 3. protein networks 4. localization and diseases 5. disease networks 6. protein networks 7. Szklarczyk, Franceschini et…

1.Lars Juhl JensenTurning big data and textcollections into web resources2. three parts 3. data integration 4. text mining 5. interface design 6. data integration 7. association…

1.Networks of proteins and diseases Lars Juhl Jensen2. three parts 3. protein networks 4. localization and diseases 5. disease networks 6. protein networks 7. STRING 8. Szklarczyk,…

1.>10 km 2. too much to read 3. exponential growth 4. ~40 seconds per paper 5. computer 6. as smart as a dog 7. teach it specific tricks 8. information retrieval 9. named…

1.Network biology Large-scale data and text mining Lars Juhl Jensen 2. protein networks 3. medical networks 4. guilt by association 5. protein networks 6. STRING 7. functional…

1.Data and Text MiningLars Juhl Jensen2. sequence analysis 3. protein networks 4. de Lichtenberg, Jensen et al., Science, 2005 5. adverse drug reactions 6. Campillos, Kuhn…

1.Lars Juhl Jensen Systems biology Bioinformatics on complete biological systems 2. can a biologist fix a radio? 3. Lazebnik, Biochemistry, 2004 4. one gene 5. one postdoc…

1.Network biology Large-scale data integration and text mining Lars Juhl Jensen 2. academic research center 3. contract research 4. association networks 5. guilt by association…