Protein Structure Prediction Sequence database searching Domain assignment Multiple sequence alignment Comparative or homology modeling Secondary structure prediction Homologous…

Chapter 7 Building Phylogenetic Trees Contents Phylogeny Phylogenetic trees How to make a phylogenetic tree from pairwise distances UPGMA method (+ an example) Neighbor-Joining…

Biology 4900 Biocomputing Chapter 3 Pairwise Sequence Alignment Comparing protein sequences Comparing protein sequences usually more informative than nucleotide sequences.…

* * Pairwise sequence Alignment * * Many of the images in this power point presentation are from Bioinformatics and Functional Genomics by Jonathan Pevsner (ISBN 0-471-21004-8).…

(CHAPTERs 23, 24 & 26- Brooker Text) Genetics: At the Crossroads (Quantitative, Evolution, & Development) December 11, 2007 BIO 184 Dr. Tom Peavy Molecular Cellular…

Chapter 7 Building Phylogenetic Trees Contents Phylogeny Phylogenetic trees How to make a phylogenetic tree from pairwise distances UPGMA method (+ an example) Neighbor-Joining…

Alineamiento Múltiple de secuencias ⢠It is used to decide if two proteins (or genes) are related structurally or functionally ⢠It is used to identify domains or…

Pairwise sequence Alignment Learning objectives Define homologs, paralogs, orthologs Perform pairwise alignments (NCBI BLAST) Understand how scores are assigned to aligned…

Biology 4900 Biocomputing Chapter 3 Pairwise Sequence Alignment Comparing protein sequences Comparing protein sequences usually more informative than nucleotide sequences.…

Pairwise sequence Alignment Learning objectives Define homologs, paralogs, orthologs Perform pairwise alignments (NCBI BLAST) Understand how scores are assigned to aligned…