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www.geoinformatics.upol.cz On Shape Metrics in Landscape Analyses Vít PÁSZTO Department of Geoinformatics, Faculty of Science, Palacký University in Olomouc Reg. č.: CZ.1.07/2.3.00/20.0170
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Www.geoinformatics.upol.cz On Shape Metrics in Landscape Analyses Vít PÁSZTO Department of Geoinformatics, Faculty of Science, Palacký University in Olomouc.

Dec 30, 2015

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Page 1: Www.geoinformatics.upol.cz On Shape Metrics in Landscape Analyses Vít PÁSZTO Department of Geoinformatics, Faculty of Science, Palacký University in Olomouc.

www.geoinformatics.upol.cz

On Shape Metrics in Landscape Analyses

Vít PÁSZTO

Department of Geoinformatics, Faculty of Science, Palacký University in Olomouc

Reg. č.: CZ.1.07/2.3.00/20.0170

Page 2: Www.geoinformatics.upol.cz On Shape Metrics in Landscape Analyses Vít PÁSZTO Department of Geoinformatics, Faculty of Science, Palacký University in Olomouc.

www.geoinformatics.upol.cz

Presentation schedule

• Introduction

• Data used

• Study area

• Methods

• Case study 1 (Results)

• Case study 2 (Results)

• Case study 3 (Initial idea)

• Conclusions

Page 3: Www.geoinformatics.upol.cz On Shape Metrics in Landscape Analyses Vít PÁSZTO Department of Geoinformatics, Faculty of Science, Palacký University in Olomouc.

www.geoinformatics.upol.cz

Introduction

• Computer capabilities used by landscape ecologists

• Quantification of landscape patches

• Via various indexes and metrics

• Prerequisite to the study pattern-process relationships (McGarigal and Marks, 1995)

• Progress faciliated by recent advances in computer processing and GIT

Page 4: Www.geoinformatics.upol.cz On Shape Metrics in Landscape Analyses Vít PÁSZTO Department of Geoinformatics, Faculty of Science, Palacký University in Olomouc.

www.geoinformatics.upol.cz

Introduction

• Shape and spatial metrics are exactly those methods for quantitative description

• In combination with multivariate statistics, it is possible to evaluate, classify and cluster patches

• Available metrics were used (as many as possible)

• Unusual approach in CLC and city footprint analysis

Page 5: Www.geoinformatics.upol.cz On Shape Metrics in Landscape Analyses Vít PÁSZTO Department of Geoinformatics, Faculty of Science, Palacký University in Olomouc.

www.geoinformatics.upol.cz

Methods - Shape & spatial metrics

• Fundamentally based on patch area, perimeter and shape

• Easy-to-obtain metrics & complex metrics

• Software used:o FRAGSTATS 4.1o Shape Metrics for ArcGIS for Desktop 10.x

• EXAMPLE/EXPLANATION

Page 6: Www.geoinformatics.upol.cz On Shape Metrics in Landscape Analyses Vít PÁSZTO Department of Geoinformatics, Faculty of Science, Palacký University in Olomouc.

www.geoinformatics.upol.cz

Methods - Shape & spatial metrics

Page 7: Www.geoinformatics.upol.cz On Shape Metrics in Landscape Analyses Vít PÁSZTO Department of Geoinformatics, Faculty of Science, Palacký University in Olomouc.

www.geoinformatics.upol.cz

Methods - Shape & spatial metrics

Page 8: Www.geoinformatics.upol.cz On Shape Metrics in Landscape Analyses Vít PÁSZTO Department of Geoinformatics, Faculty of Science, Palacký University in Olomouc.

www.geoinformatics.upol.cz

Methods - Shape & spatial metrics

Page 9: Www.geoinformatics.upol.cz On Shape Metrics in Landscape Analyses Vít PÁSZTO Department of Geoinformatics, Faculty of Science, Palacký University in Olomouc.

www.geoinformatics.upol.cz

Methods - Shape & spatial metrics

Page 10: Www.geoinformatics.upol.cz On Shape Metrics in Landscape Analyses Vít PÁSZTO Department of Geoinformatics, Faculty of Science, Palacký University in Olomouc.

www.geoinformatics.upol.cz

Methods - Shape & spatial metrics

Convex hull

Detour index

Page 11: Www.geoinformatics.upol.cz On Shape Metrics in Landscape Analyses Vít PÁSZTO Department of Geoinformatics, Faculty of Science, Palacký University in Olomouc.

www.geoinformatics.upol.cz

Case study 1 - Data

• Freely available CORINE Land Cover dataset:o 1990o 2000o 2006

• Level 1 of CLC - 5 classes:o Artificial surfaceso Agricultural areaso Forest and semi-natural areas

o Wetlandso Water bodies

Page 12: Www.geoinformatics.upol.cz On Shape Metrics in Landscape Analyses Vít PÁSZTO Department of Geoinformatics, Faculty of Science, Palacký University in Olomouc.

www.geoinformatics.upol.cz

Case study 1 - Study area

• Olomouc region (800 km2) - 1/2 of London

• More than 944 patches analyzed

Page 13: Www.geoinformatics.upol.cz On Shape Metrics in Landscape Analyses Vít PÁSZTO Department of Geoinformatics, Faculty of Science, Palacký University in Olomouc.

www.geoinformatics.upol.cz

Case study 1 - Methods

• Principal Component Analysis (PCA) for consequent clustering

• Cluster analysis:o DIvisive ANAlysis clustering (DIANA)o Partitioning Around Medoids (PAM)

• Software - Rstudio environment using R programming language

Page 14: Www.geoinformatics.upol.cz On Shape Metrics in Landscape Analyses Vít PÁSZTO Department of Geoinformatics, Faculty of Science, Palacký University in Olomouc.

www.geoinformatics.upol.cz

Case study 1 - Workflow Diagram

CLC (1990, 2000, 2006)

Metrics calculation

PCA Clustering

DIANA

PAM

Page 15: Www.geoinformatics.upol.cz On Shape Metrics in Landscape Analyses Vít PÁSZTO Department of Geoinformatics, Faculty of Science, Palacký University in Olomouc.

www.geoinformatics.upol.cz

Case study 1 – no. of clusters

Page 16: Www.geoinformatics.upol.cz On Shape Metrics in Landscape Analyses Vít PÁSZTO Department of Geoinformatics, Faculty of Science, Palacký University in Olomouc.

www.geoinformatics.upol.cz

Results – DIANA clustering

• Hierarchichal clustering

• Tree structured dendrogram

• One starting cluster divided until each cluster contains one single object

Page 17: Www.geoinformatics.upol.cz On Shape Metrics in Landscape Analyses Vít PÁSZTO Department of Geoinformatics, Faculty of Science, Palacký University in Olomouc.

www.geoinformatics.upol.cz

Results – DIANA clustering

Page 18: Www.geoinformatics.upol.cz On Shape Metrics in Landscape Analyses Vít PÁSZTO Department of Geoinformatics, Faculty of Science, Palacký University in Olomouc.

www.geoinformatics.upol.cz

Results – Diana clustering

Page 19: Www.geoinformatics.upol.cz On Shape Metrics in Landscape Analyses Vít PÁSZTO Department of Geoinformatics, Faculty of Science, Palacký University in Olomouc.

www.geoinformatics.upol.cz

Results – PAM clustering

• Non-hierarchichal clustering

• „Scatterplot“ groups• Using medoids• Similar to K-means• More robust than K-

means

Page 20: Www.geoinformatics.upol.cz On Shape Metrics in Landscape Analyses Vít PÁSZTO Department of Geoinformatics, Faculty of Science, Palacký University in Olomouc.

www.geoinformatics.upol.cz

Results – PAM clustering

Page 21: Www.geoinformatics.upol.cz On Shape Metrics in Landscape Analyses Vít PÁSZTO Department of Geoinformatics, Faculty of Science, Palacký University in Olomouc.

www.geoinformatics.upol.cz

Results – PAM clustering

Page 22: Www.geoinformatics.upol.cz On Shape Metrics in Landscape Analyses Vít PÁSZTO Department of Geoinformatics, Faculty of Science, Palacký University in Olomouc.

www.geoinformatics.upol.cz

Case study 2 - Data

• Urban Atlas:o Year 2006o Only Artificial surfaceso Digitized to have urban footprintso All EU member states capital cities

Page 23: Www.geoinformatics.upol.cz On Shape Metrics in Landscape Analyses Vít PÁSZTO Department of Geoinformatics, Faculty of Science, Palacký University in Olomouc.

www.geoinformatics.upol.cz

Case study 2

Page 24: Www.geoinformatics.upol.cz On Shape Metrics in Landscape Analyses Vít PÁSZTO Department of Geoinformatics, Faculty of Science, Palacký University in Olomouc.

www.geoinformatics.upol.cz

• Fractal Dimension Index• Bruxelles (1.0694) • Vienna (1.1505)

• Cohesion Index• Bruxelles (0,948875) • Tallin (0,636262)

Results

Page 25: Www.geoinformatics.upol.cz On Shape Metrics in Landscape Analyses Vít PÁSZTO Department of Geoinformatics, Faculty of Science, Palacký University in Olomouc.

www.geoinformatics.upol.cz

Results

• Elbow diagram (no. of clusters):

Page 26: Www.geoinformatics.upol.cz On Shape Metrics in Landscape Analyses Vít PÁSZTO Department of Geoinformatics, Faculty of Science, Palacký University in Olomouc.

www.geoinformatics.upol.cz

Results – DIANA clustering

Page 27: Www.geoinformatics.upol.cz On Shape Metrics in Landscape Analyses Vít PÁSZTO Department of Geoinformatics, Faculty of Science, Palacký University in Olomouc.

www.geoinformatics.upol.cz

Results – PAM clustering

Page 28: Www.geoinformatics.upol.cz On Shape Metrics in Landscape Analyses Vít PÁSZTO Department of Geoinformatics, Faculty of Science, Palacký University in Olomouc.

www.geoinformatics.upol.cz

Results

Page 29: Www.geoinformatics.upol.cz On Shape Metrics in Landscape Analyses Vít PÁSZTO Department of Geoinformatics, Faculty of Science, Palacký University in Olomouc.

www.geoinformatics.upol.cz

• An idea (to be done)• Church of st. Maurice

Case study 3 – what about cartography

Page 30: Www.geoinformatics.upol.cz On Shape Metrics in Landscape Analyses Vít PÁSZTO Department of Geoinformatics, Faculty of Science, Palacký University in Olomouc.

www.geoinformatics.upol.cz

Case study 3 – what about cartography

Page 31: Www.geoinformatics.upol.cz On Shape Metrics in Landscape Analyses Vít PÁSZTO Department of Geoinformatics, Faculty of Science, Palacký University in Olomouc.

www.geoinformatics.upol.cz

Case study 3 – what about cartography

Page 32: Www.geoinformatics.upol.cz On Shape Metrics in Landscape Analyses Vít PÁSZTO Department of Geoinformatics, Faculty of Science, Palacký University in Olomouc.

www.geoinformatics.upol.cz

Conclusions & Discussion

• Shape Metrics are useful from quantitative point of view

• Tool for (semi)automatic shape recognition via clustering

• Double-edged and difficult interpretation• Strongly purpose-oriented• Geographical context is needed• Input data (raster&vector) sensitivity

Page 33: Www.geoinformatics.upol.cz On Shape Metrics in Landscape Analyses Vít PÁSZTO Department of Geoinformatics, Faculty of Science, Palacký University in Olomouc.

www.geoinformatics.upol.cz

Conclusions & Discussion

• Not many reference studies to validate the results

• Shape metrics correlations• There is no consensus about shape metrics

use among the scientists• Proximity and Cohesion index – for centrality

analysis• Fractal dimension, Perim-area, Shape Index –

for line complexity evaluation

Page 34: Www.geoinformatics.upol.cz On Shape Metrics in Landscape Analyses Vít PÁSZTO Department of Geoinformatics, Faculty of Science, Palacký University in Olomouc.

www.geoinformatics.upol.cz

The End

Vít PÁ[email protected]

On Shape Metrics in Landscape Analyses