WHY? NEW SCIENCE AND THERAPIES FOR PATIENTS WITH MENTAL ILLNESS Now is the most promising time in the past two decades for mental health research
Dec 29, 2015
WHY?
NEW SCIENCE AND THERAPIES FOR PATIENTS WITH MENTAL ILLNESS
NEW SCIENCE AND THERAPIES FOR PATIENTS WITH MENTAL ILLNESS
Now is the most
promising time
in the past
two decades
for mental
health research
• Mental illness is a biological brain disease
• Medicines in development based on basic neuroscience research
• A new era has dawned for understanding complex human genetic diseases
• Fostering new approaches to treatment and diagnosis
PAST INVESTMENTS IN BASIC RESEARCHPAST INVESTMENTS IN BASIC RESEARCH
Basic neuroscience
Human genetics
Example from autism spectrum disorder
How can we come to understand the underlying molecular causes of schizophrenia and bipolar illness?
The single largest risk is the sequence of a patient’s genes
Gottesman 1991
Twin studies support a strong genetic component
Concordance rate
Schizophrenia
Bipolar disorder
0 20 40 60 80 100
Dizygotic twins
Monozygotic twins
Tsuang and Faraone 1990
Families are at an increased risk
Lambda
0 5 10 15 20
Siblings
Parents
Children
Half-siblings
Grandchildren
Nephews/Nieces
Aunts/Uncles
General population
Bipolar disorder
Schizophrenia
GENETIC MAPPINGGENETIC MAPPING
1. Determinative mutations; strong effects
2. High penetrance: % of people with the gene that get the illness is high
3. >2000 discovered in humans
4. Tracing gene transmission in families
Dad
Mom
B b
B
b
BB
Bb
Bb
bb
Mendelian genetic diseases: rare variants
McCarthy et al., Nat Genet Rev 2008
DNA-based frequency variants and disease susceptibility
Mendeliandisease
Frequency of DNA variation in population
Penetranceof disease
High
Intermediate
Modest
Low
Very rare Rare Uncommon Common
Map of Orlando — state level
McCarthy et al., Nat Genet Rev 2008
DNA-based frequency variants and disease susceptibility
Mendeliandisease
Low-frequency variants with intermediate penetrance
Hard to identify
genetically
Variants identifiable by whole-genome
association studies
Frequency of DNA variation in population
Penetranceof disease
High
Intermediate
Modest
Low
Very rare Rare Uncommon Common
Complex genetic disease
COMPLEX GENETIC DISEASESCOMPLEX GENETIC DISEASES
• Common variants, small effects each gene; rare gene variants, stronger effects
• Additive effects lead to risk of illness
Multiple genes
• Using most sophisticated methods available in human genetics
Need large patient samples
How many samples are needed?
30,000 each from patients with:
• Schizophrenia
• Bipolar disorder
• Controls
0 0 0 3
0 0 1 52
0 1 14 98
0 30 93 100
0 0 0 21
0 0 10 96
0 8 61 100
0 83 100 100
0 0 7 92
0 13 75 100
0 68 100 100
10 98 100 100
15% increased risk
20% increased risk
30% increased risk
Rare
Common
Rare
Common
Rare
Common
Number of Cases and Controls in the Study
1,000 5,000 10,000 30,000
GoodPower
NoPower
Power to detect in a psychiatric genetics study
Large, collaborative whole-genome studies
~70% of data or ~6 billion genotypes produced at the Stanley Center/Broad Institute
Bipolar disorder
3 studies combined~4,400 cases, ~6,200 controls
Schizophrenia
7 sites combined~3,500 cases, ~3,500 controls
Wellcome Trust Case Control Consortium
McCarthy et al., Nat Genet Rev 2008
DNA-based frequency variants and disease susceptibility
Variants identifiable by whole-genome
association studies
Frequency of DNA variation in population
Penetranceof disease
High
Intermediate
Modest
Low
Very rare Rare Uncommon Common
Map of Orlando — city level
WHAT MAKES THIS POSSIBLE?WHAT MAKES THIS POSSIBLE?
• Sequence of human genome
• Dense map of markers or signposts across the genome — like signs along the highway
• Methods for measuring signs or markers that allow for measurement of 1–2 million markers at once in an individual human sample of DNA
• Computer programs allow interpretation of results
• Methods only 2+ years old
METHOD FOR STUDYING COMPLEX GENETICSMETHOD FOR STUDYING COMPLEX GENETICS
• Search for markers in populations, not families
Association study
Affecteds Controls
Where effects are probabilistic, must compare frequencies in cases and controls
Association studies
Manuel Ferreira, Yan Meng
Whole-genome study of 4400 bipolar casesPr
obab
ility
ass
essm
ent
Chromosome
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23
0
2
4
6
8
Statistical assessment of gene findings
Cases
Controls
4434
6214
CACNA1C: L-type, voltage-gated calcium channel, alpha1c subunit
ANK3: Ankyrin G
Bidaud et al. (2006)
• Calcium channel blockers have been used to treat bipolar disorder
• Coordinates large protein complexes at specific membrane sites
• Neuronal sodium channels
• Potassium channels
• Lamotrigine used to treat bipolar disorderBennett et al. (2008)
Biological implications of genetic findings
Gargus, Biological Psychiatry 2006
The cardinal feature
of heritable ion
channel disease is a
periodic disturbance
of rhythmic
function in a
constitutionally
hyperexcitable
tissue.
“
”
FINDINGS THUS FAR IN SCHIZOPHRENIAFINDINGS THUS FAR IN SCHIZOPHRENIA
Association findings
Novel gene deletions
Jennifer Stone
Whole-genome study of 3400 schizophrenia cases
Statistical assessment of gene findings
Cases
Controls
3414
3625
1 2 3 4 5 6 7 9 10 118 12 13 14 15 16 17 X18 19 20 21 22
Chromosome
Prob
abili
ty a
sses
smen
t
0
2
4
6
8
Deletions of genes in schizophrenia
An excess of DNA deletions in genes in samples of patients vs. controls
• Per patient very small increase
• Biological implications being evaluated will be clues to underlying causal pathways
McCarthy et al., Nat Genet Rev 2008
DNA-based frequency variants and disease susceptibility
Variants identifiable by whole-genome
association studies
Frequency of DNA variation in population
Penetranceof disease
High
Intermediate
Modest
Low
Very rare Rare Uncommon Common
McCarthy et al., Nat Genet Rev 2008
DNA-based frequency variants and disease susceptibility
Low-frequency variants with intermediate penetrance
Hard to identify
genetically
Penetranceof disease
High
Intermediate
Modest
Low
Very rare Rare Uncommon Common
Frequency of DNA variation in population
New methods rapidly developing
Map of Orlando — street level
NEW TECHNOLOGIES FOR GENETICSNEW TECHNOLOGIES FOR GENETICS
• High-throughput DNA sequencing: ability to sequence all genes in 1000 patient samples and 1000 controls
• More detailed map of the human genome
• Next 2–5 years WILL see this technology
McCarthy et al., Nat Genet Rev 2008
DNA-based frequency variants and disease susceptibility
Mendeliandisease
Low-frequency variants with intermediate penetrance
Hard to identify
genetically
Variants identifiable by whole-genome
association studies
Frequency of DNA variation in population
Penetranceof disease
High
Intermediate
Modest
Low
Very rare Rare Uncommon Common
• Science’s ability to unravel the underlying causes of severe mental illness is upon us
• Technologies are rapidly progressing
• What is limiting? Not the intellectual approach
• For the first time in the history of the field there is a way forward that can lead to significant improvements in diagnosis and therapy
IMPORTANT REALIZATIONIMPORTANT REALIZATION
Study Disorder Outcomes
CATIE 1 Schizophrenia74% discontinued study medication by 18 months; little difference in efficacy among antipsychotics
STAR*D 2 Depression28% achieved remission by 14 weeks of treatment with SSRI
STEP-BD 3 Bipolar disorder49% of patients who achieved recovery had recurrence within 2 year follow-up
Antipsychotic metanalysis 4 Schizophrenia Small effects vs. placebo; durability issue
1 Lieberman et al., N Engl J Med, 2005; 353:1209–1223.
2 Trivedi et al., Am J Psychiatry, 2006; 163 :28–40.
3 Perlis et al., Am J Psychiatry, 2006; 163: 217–224.
4 Leucht et al., Mol Psychiatry, 2008; 1–19.
Largest treatment studies
GENETIC DISCOVERY TO TREATMENTGENETIC DISCOVERY TO TREATMENT
• Many examples of discovering genetic predispositions to disease and translating the discoveries into important, new treatments
• As technology for discovering genes for disease have evolved, technologies for translating the discoveries into treatments have also evolved
Impact of genetics on biomedicine
Discovery of drug targets:
• Statins and HMG Coa reductase
• Proscar and benign prostatic hyperplasia (5-alpha reductase)
• Gleevec and CML (aberrant kinase)
• Herceptin antibody to Her2 for breast cancer
• New approaches to Alzheimer’s
Approaches to therapy: other illnesses
Fragile X syndrome:
• a disease of abnormal brain development
• molecular defect known
• animal models created based on human defect
• abnormal physiology clarified
• new treatments discovered based on abnormal physiology
• good results in animal model with human defect
• in early development for humans
• mGluR5 antagonists
Paradigm for new treatments for autism, bipolar disorder, and schizophrenia
Understand functional consequences of variant gene
Identify risk genes
Develop cell-based assays
Develop mouse model with a quantifiable phenotype; a consequence of variant gene
Identify chemicals that reverse cell-based and animal-based phenotype
Human trials in genetically defined variant
Test in broader group of patients with the illness
• Glu 2,3 agonist
• D-cycloserine
• Desmethyl clozaril
• M1 allosteric agonists
• Gaba alpha 2,3 agonists
• PDE-10 inhibitors
• Alpha-7 nicotinic agonists
Possible new drugs in development
Drug mechanism Stage of research
mGlur2,3 agonist Expanded human trials
Desmethyl clozaril Human trials
Alpha-7 nicotinic receptor agonist Human trials
Gaba alpha 2,3 agonist Early human trials
New approaches to therapy
Drug mechanism Stage of research
D-cycloserine: novel regimen,use with psychotherapy
Proven in acrophobia,anxiety
Phosphodiesterase 10 inhibitors
Animal research,excellent results
New approaches to therapy
• Significant progress on new therapies is possible, even in genetically determined disease where development of the brain is awry
• Significant progress toward identifying underlying causes of schizophrenia, bipolar disorder, and autism, with genetic technologies evolving rapidly
• The coming 5–10 years will lead to a much greater understanding of molecular basis for these and other related disorders
SUMMARY OF WHERE WE ARESUMMARY OF WHERE WE ARE
What will this mean for patients?
• Much better diagnostic tools, clearer categories of diagnosis, and more personalized therapy
• Many new targets for new medicines
McCarthy et al., Nat Genet Rev 2008
DNA-based frequency variants and disease susceptibility
Mendeliandisease
Low-frequency variants with intermediate penetrance
Hard to identify
genetically
Variants identifiable by whole-genome
association studies
Frequency of DNA variation in population
Penetranceof disease
High
Intermediate
Modest
Low
Very rare Rare Uncommon Common
Complex genetic disease
• Science’s ability to unravel the underlying causes of severe mental illness is upon us
• Technologies are rapidly progressing
• What is limiting? Not the intellectual approach
• For the first time in the history of the field there is a way forward that can lead to significant improvements in diagnosis and therapy
IMPORTANT REALIZATIONIMPORTANT REALIZATION