GEOCHEMISTRY ARTICLES – January 2020
Analytical Chemistry
Aparecida Silva Almeida, C., Regina Baggio, S., Regina Barros
Mariutti, L., Bragagnolo, N., 2020. One-step rapid extraction of
phytosterols from vegetable oils. Food Research International 130,
108891.
Bastviken, D., Nygren, J., Schenk, J., Parellada Massana, R.,
Duc, N.T., 2020. Technical note: Facilitating the use of low-cost
methane (CH4) sensors in flux chambers – calibration, data
processing, and an open source make-it-yourself logger.
Biogeosciences Discussions 2020, 1-16.
Bian, X., Wang, K., Tan, E., Diwu, P., Zhang, F., Guo, Y., 2020.
A selective ensemble preprocessing strategy for near-infrared
spectral quantitative analysis of complex samples. Chemometrics and
Intelligent Laboratory Systems 197, 103916.
Bolotnik, T.A., Timchenko, Y.V., Plyushchenko, I.V., Levkina,
V.V., Pirogov, A.V., Smolenkov, A.D., Popik, M.V., Shpigun, O.A.,
2019. Use of chemometric methods of data analysis for the
identification and typification of petroleum and petroleum
products. Journal of Analytical Chemistry 74, 1336-1340.
Culka, A., Košek, F., Oren, A., Mana, L., Jehlička, J., 2019.
Detection of carotenoids of halophilic prokaryotes in solid
inclusions inside laboratory-grown chloride and sulfate crystals
using a portable Raman spectrometer: applications for Mars
exploration. FEMS Microbiology Letters 366, fnz239.
Elsayed, M., Mahmoud, M., El-Husseiny, A., Kamal, M.S.,
Al-Garadi, K., 2019. A new method to evaluate reaction kinetics of
acids with carbonate rocks using NMR diffusion measurements. Energy
& Fuels 34, 787-797.
Fan, M., Andrade, G.F.S., Brolo, A.G., 2020. A review on recent
advances in the applications of surface-enhanced Raman scattering
in analytical chemistry. Analytica Chimica Acta 1097, 1-29.
Hansen, F.A., Pedersen-Bjergaard, S., 2020. Emerging extraction
strategies in analytical chemistry. Analytical Chemistry 92,
2-15.
Langer, J., Jimenez de Aberasturi, D., Aizpurua, J.,
Alvarez-Puebla, R.A., Auguié, B., Baumberg, J.J., Bazan, G.C.,
Bell, S.E.J., Boisen, A., Brolo, A.G., Choo, J., Cialla-May, D.,
Deckert, V., Fabris, L., Faulds, K., García de Abajo, F.J.,
Goodacre, R., Graham, D., Haes, A.J., Haynes, C.L., Huck, C., Itoh,
T., Käll, M., Kneipp, J., Kotov, N.A., Kuang, H., Le Ru, E.C., Lee,
H.K., Li, J.-F., Ling, X.Y., Maier, S.A., Mayerhöfer, T.,
Moskovits, M., Murakoshi, K., Nam, J.-M., Nie, S., Ozaki, Y.,
Pastoriza-Santos, I., Perez-Juste, J., Popp, J., Pucci, A., Reich,
S., Ren, B., Schatz, G.C., Shegai, T., Schlücker, S., Tay, L.-L.,
Thomas, K.G., Tian, Z.-Q., Van Duyne, R.P., Vo-Dinh, T., Wang, Y.,
Willets, K.A., Xu, C., Xu, H., Xu, Y., Yamamoto, Y.S., Zhao, B.,
Liz-Marzán, L.M., 2020. Present and future of surface-enhanced
Raman scattering. ACS Nano 14, 28-117.
Moro, M.K., Neto, Á.C., Lacerda, V., Romão, W., Chinelatto,
L.S., Castro, E.V.R., Filgueiras, P.R., 2020. FTIR, 1H and 13C NMR
data fusion to predict crude oils properties. Fuel 263, 116721.
Pichon, V., Delaunay, N., Combès, A., 2020. Sample preparation
using molecularly imprinted polymers. Analytical Chemistry 92,
16-33.
Richardson, S.D., Kimura, S.Y., 2020. Water analysis: Emerging
contaminants and current issues. Analytical Chemistry 92,
473-505.
Sakamoto, T., Qiu, Z., Inagaki, M., Fujimoto, K., 2020.
Simultaneous amino acid analysis based on 19F NMR using a modified
OPA-derivatization method. Analytical Chemistry 92, 1669-1673.
Xia, L., Yang, J., Su, R., Zhou, W., Zhang, Y., Zhong, Y.,
Huang, S., Chen, Y., Li, G., 2020. Recent progress in fast sample
preparation techniques. Analytical Chemistry 92, 34-48.
Xu, L., Huang, S., Liu, Y., Wei, S., Chen, G., Gong, Z., Ouyang,
G., 2020. Hollow carbon nanobubbles-coated solid-phase
microextraction fibers for the sensitive detection of organic
pollutants. Analytica Chimica Acta 1097, 85-93.
Zhang, P., Lu, S., Li, J., Chang, X., 2020. 1D and 2D Nuclear
magnetic resonance (NMR) relaxation behaviors of protons in clay,
kerogen and oil-bearing shale rocks. Marine and Petroleum Geology
114, 104210.
Gas Chromatography/GC×GC/GC-MS
Amaral, M.S.S., Nolvachai, Y., Marriott, P.J., 2020.
Comprehensive two-dimensional gas chromatography advances in
technology and applications - biennial update. Analytical Chemistry
92, 85-104.
Chiu, H.-H., Kuo, C.-H., 2020. Gas chromatography-mass
spectrometry-based analytical strategies for fatty acid analysis in
biological samples. Journal of Food and Drug Analysis 28,
60-73.
Crucello, J., Pierone, D.V., Hantao, L.W., 2020. Simple and
cost-effective determination of polychlorinated biphenyls in
insulating oils using an ionic liquid-based stationary phase and
flow modulated comprehensive two-dimensional gas chromatography
with electron capture detection. Journal of Chromatography A 1610,
460530.
Hashemi-Nasab, F.S., Parastar, H., 2020. Pattern recognition
analysis of gas chromatographic and infrared spectroscopic
fingerprints of crude oil for source identification. Microchemical
Journal 153, 104326.
Li, Y., Pang, T., Shi, J., Deng, X., Kong, G., Lu, X., 2020.
Conversion method for linear retention indices in gas
chromatography acquired using n-alkanes and n-fatty acid methyl
esters. Chinese Journal of Chromatography 38, 244-249.
Liao, P.-H., Yang, H.-H., Wu, P.-C., Abu Bakar, N.H., Urban,
P.L., 2020. On-line coupling of simultaneous
distillation–extraction using the Likens–Nickerson apparatus with
gas chromatography. Analytical Chemistry 92, 1228-1235.
Nunes, V.O., Silva, R.V.S., Romeiro, G.A., Azevedo, D.A., 2020.
The speciation of the organic compounds of slow pyrolysis bio-oils
from Brazilian tropical seed cake fruits using high-resolution
techniques: GC × GC-TOFMS and ESI(±)-Orbitrap HRMS. Microchemical
Journal 153, 104514.
Schena, T., Lazzari, E., Primaz, C., Canielas Krause, L.,
Machado, M.E., Bastos Caramão, E., 2020. Upgrading of coconut
fibers bio-oil: An investigation by GC×GC/TOFMS. Journal of
Environmental Chemical Engineering 8, 103662.
Sojinu, O.S., 2020. Preliminary evaluation of bitumen
contamination in environmental samples using comprehensive gas
chromatography GC×GC – Time of flight mass spectrometry
(GC×GC-TOFMS). Environmental Forensics 21, 79-86.
van Mourik, L.M., Lava, R., O'Brien, J., Leonards, P.E.G., de
Boer, J., Ricci, M., 2020. The underlying challenges that arise
when analysing short-chain chlorinated paraffins in environmental
matrices. Journal of Chromatography A 1610, 460550.
Xie, S.-M., Chen, X.-X., Zhang, J.-H., Yuan, L.-M., 2020. Gas
chromatographic separation of enantiomers on novel chiral
stationary phases. TrAC Trends in Analytical Chemistry 124,
115808.
Imaging: AFM
Müller, H., Marozava, S., Probst, A.J., Meckenstock, R.U., 2020.
Groundwater cable bacteria conserve energy by sulfur
disproportionation. The ISME Journal 14, 623-634.
Yamada, Y., Guillemette, R., Baudoux, A.-C., Patel, N., Azam,
F., 2020. Viral attachment to biotic and abiotic surfaces in
seawater. Applied and Environmental Microbiology 86,
e01687-01619.
Imaging: SEM, TEM, HIM
Akhondzadeh, H., Keshavarz, A., Al-Yaseri, A.Z., Ali, M., Awan,
F.U.R., Wang, X., Yang, Y., Iglauer, S., Lebedev, M., 2020.
Pore-scale analysis of coal cleat network evolution through liquid
nitrogen treatment: A Micro-Computed Tomography investigation.
International Journal of Coal Geology 219, 103370.
Balfourier, A., Luciani, N., Wang, G., Lelong, G., Ersen, O.,
Khelfa, A., Alloyeau, D., Gazeau, F., Carn, F., 2020. Unexpected
intracellular biodegradation and recrystallization of gold
nanoparticles. Proceedings of the National Academy of Sciences 117,
103-113.
Bonneville, S., Delpomdor, F., Préat, A., Chevalier, C., Araki,
T., Kazemian, M., Steele, A., Schreiber, A., Wirth, R., Benning,
L.G., 2020. Molecular identification of fungi microfossils in a
Neoproterozoic shale rock. Science Advances 6, eaax7599.
Cui, L., Liu, W., Zhang, X., 2020. Phosphatized microbial
fossils from the lowest Cambrian of South China and their
ecological and environmental implications for the Kuanchuanpu
biota. Precambrian Research 338, 105560.
Fu, Y., Chen, Z., Zhou, S., Wei, S., 2020. Comparative study of
the materials and lacquering techniques of the lacquer objects from
Warring States Period China. Journal of Archaeological Science 114,
105060.
Goodman, A., Sanguinito, S., Kutchko, B., Natesakhawat, S.,
Cvetic, P., Allen, A.J., 2020. Shale pore alteration: Potential
implications for hydrocarbon extraction and CO2 storage. Fuel 265,
116930.
Goral, J., Panja, P., Deo, M., Andrew, M., Linden, S., Schwarz,
J.-O., Wiegmann, A., 2020. Confinement effect on porosity and
permeability of shales. Scientific Reports 10, 49.
Hackley, P.C., Araujo, C.V., Borrego, A.G., Bouzinos, A.,
Cardott, B.J., Carvajal-Ortiz, H., López Cely, M.R., Chabalala, V.,
Crosdale, P.J., Demchuk, T.D., Eble, C.F., Flores, D., Furmann, A.,
Gentzis, T., Gonçalves, P.A., Guvad, C., Hámor-Vidó, M., Jelonek,
I., Johnston, M.N., Juliao-Lemus, T., Kalaitzidis, S., Knowles,
W.R., Kus, J., Li, Z., Macleod, G., Mastalerz, M., Menezes, T.R.,
Ocubalidet, S., Orban, R., Pickel, W., Ranasinghe, P., Ribeiro, J.,
Gómez Rojas, O.P., Ruiz-Monroy, R., Schmidt, J.S., Seyedolali, A.,
Siavalas, G., Suarez-Ruiz, I., Vargas, C.V., Valentine, B.J.,
Wagner, N., Wrolson, B., Jaramillo Zapata, J.E., 2020. Testing
reproducibility of vitrinite and solid bitumen reflectance
measurements in North American unconventional source-rock reservoir
petroleum systems. Marine and Petroleum Geology 114, 104172.
Han, H., Pang, P., Zhong, N., Luo, Q., Ma, Y., Gao, Y., 2020.
The pore characteristics and gas potential of the Jurassic
continental shales in the middle-small basins, northwest China.
Journal of Petroleum Science and Engineering 188, 106873.
Hand, E., 2020. Cheap shots. Science 367, 354-358.
Hou, H., Shao, L., Tang, Y., Zhao, S., Yuan, Y., Li, Y., Mu, G.,
Zhou, Y., Liang, G., Zhang, J., 2020. Quantitative characterization
of low-rank coal reservoirs in the southern Junggar Basin, NW
China: Implications for pore structure evolution around the first
coalification jump. Marine and Petroleum Geology 113, 104165.
Jacquemot, P., Viennet, J.-C., Bernard, S., Le Guillou, C.,
Rigaud, B., Delbes, L., Georgelin, T., Jaber, M., 2019. The
degradation of organic compounds impacts the crystallization of
clay minerals and vice versa. Scientific Reports 9, 20251.
Kato, K., Shinoda, T., Nagao, R., Akimoto, S., Suzuki, T.,
Dohmae, N., Chen, M., Allakhverdiev, S.I., Shen, J.-R., Akita, F.,
Miyazaki, N., Tomo, T., 2020. Structural basis for the adaptation
and function of chlorophyll f in photosystem I. Nature
Communications 11, 238.
Khan, I., Zhong, N., Luo, Q., Ai, J., Yao, L., Luo, P., 2020.
Maceral composition and origin of organic matter input in
Neoproterozoic–Lower Cambrian organic-rich shales of Salt Range
Formation, upper Indus Basin, Pakistan. International Journal of
Coal Geology 217, 103319.
Kutchko, B., Sanguinito, S., Natesakhawat, S., Cvetic, P., Culp,
J.T., Goodman, A., 2020. Quantifying pore scale and matrix
interactions of SCCO2 with the Marcellus shale. Fuel 266,
116928.
Lin, K., Huang, X., Zhao, Y.-P., 2019. Combining image
recognition and simulation to reproduce the adsorption/desorption
behaviors of shale gas. Energy & Fuels 34, 258-269.
Lin, X., Huang, M., Chen, H., Wang, J., Wang, R., 2019.
Influence of different polar solvent extraction on pore structure
in shale. Acta Petrolei Sinica 40, 1485-1494.
Liu, X., Lai, J., Fan, X., Shu, H., Wang, G., Ma, X., Liu, M.,
Guan, M., Luo, Y., 2020. Insights in the pore structure, fluid
mobility and oiliness in oil shales of Paleogene Funing Formation
in Subei Basin, China. Marine and Petroleum Geology 114,
104228.
Mansoori Mosleh, F., Mortazavi, Y., Hosseinpour, N., Khodadadi,
A.A., 2020. Asphaltene adsorption onto carbonaceous nanostructures.
Energy & Fuels 34, 211-224.
Payandi-Rolland, D., Shirokova, L.S., Nakhle, P., Tesfa, M.,
Abdou, A., Causserand, C., Lartiges, B., Rols, J.-L., Guérin, F.,
Bénézeth, P., Pokrovsky, O.S., 2020. Aerobic release and
biodegradation of dissolved organic matter from frozen peat:
Effects of temperature and heterotrophic bacteria. Chemical Geology
536, 119448.
Senatore, G., Mastroleo, F., Leys, N., Mauriello, G., 2020.
Growth of Lactobacillus reuteri DSM17938 under two simulated
microgravity systems: Changes in reuterin production,
gastrointestinal passage resistance, and stress genes expression
response. Astrobiology 20, 1-14.
Shen, P., Li, G., Li, B., Li, X., Liang, Y., Lv, Q., 2020.
Permeability measurement and discovery of dissociation process of
hydrate sediments. Journal of Natural Gas Science and Engineering
75, 103155.
Song, D., Tuo, J., Wang, Y., Wu, C., Zhang, M., 2019. Research
advances on characteristics of nanopore structure of organic-rich
shales. Acta Sedimentologica Sinica 37, 1309-1324.
Song, D., Tuo, J., Wu, C., Zhang, M., Su, L., 2020. Comparison
of pore evolution for a Mesoproterozoic marine shale and a Triassic
terrestrial mudstone during artificial maturation experiments.
Journal of Natural Gas Science and Engineering 75, 103153.
Song, L., Carr, T.R., 2020. The pore structural evolution of the
Marcellus and Mahantango shales, Appalachian Basin. Marine and
Petroleum Geology 114, 104226.
Wang, C., Wu, K., Scott, G.G., Akisanya, A.R., Gan, Q., Zhou,
Y., 2020. A new method for pore structure quantification and pore
network extraction from SEM images. Energy & Fuels 34,
82-94.
Xu, S., Gou, Q., Hao, F., Zhang, B., Shu, Z., Lu, Y., Wang, Y.,
2020. Shale pore structure characteristics of the high and low
productivity wells, Jiaoshiba shale gas field, Sichuan Basin,
China: Dominated by lithofacies or preservation condition? Marine
and Petroleum Geology 114, 104211.
Yang, W., He, S., Iglauer, S., Guo, X., Zhai, G., Zhou, Z.,
Dong, T., Tao, Z., Wei, S., 2020. Porosity characteristics of
different lithofacies in marine shale: A case study of
Neoproterozoic Sinian Doushantuo formation in Yichang area, China.
Journal of Petroleum Science and Engineering 187, 106856.
Zhang, K., Jia, C., Song, Y., Jiang, S., Jiang, Z., Wen, M.,
Huang, Y., Liu, X., Jiang, T., Peng, J., Wang, X., Xia, Q., Li, B.,
Li, X., Liu, T., 2020. Analysis of Lower Cambrian shale gas
composition, source and accumulation pattern in different tectonic
backgrounds: A case study of Weiyuan Block in the Upper Yangtze
region and Xiuwu Basin in the Lower Yangtze region. Fuel 263,
115978.
Zhou, H., Chen, J., Li, H., Quan, K., Zhang, Y., Qiu, H., 2020.
Imidazolium ionic liquid-enhanced poly(quinine)-modified silica as
a new multi-mode chromatographic stationary phase for separation of
achiral and chiral compounds. Talanta 211, 120743.
Imaging: Xray CT
Akhondzadeh, H., Keshavarz, A., Al-Yaseri, A.Z., Ali, M., Awan,
F.U.R., Wang, X., Yang, Y., Iglauer, S., Lebedev, M., 2020.
Pore-scale analysis of coal cleat network evolution through liquid
nitrogen treatment: A Micro-Computed Tomography investigation.
International Journal of Coal Geology 219, 103370.
Goral, J., Panja, P., Deo, M., Andrew, M., Linden, S., Schwarz,
J.-O., Wiegmann, A., 2020. Confinement effect on porosity and
permeability of shales. Scientific Reports 10, 49.
Jing, Z., Balucan, R.D., Underschultz, J.R., Pan, S., Steel,
K.M., 2020. Chemical stimulation for enhancing coal seam
permeability: Laboratory study into permeability variation and coal
structure examination. International Journal of Coal Geology 219,
103375.
Liu, X., Lai, J., Fan, X., Shu, H., Wang, G., Ma, X., Liu, M.,
Guan, M., Luo, Y., 2020. Insights in the pore structure, fluid
mobility and oiliness in oil shales of Paleogene Funing Formation
in Subei Basin, China. Marine and Petroleum Geology 114,
104228.
Marone, F., Schlepütz, C.M., Marti, S., Fusseis, F.,
Velásquez-Parra, A., Griffa, M., Jiménez-Martínez, J., Dobson,
K.J., Stampanoni, M., 2020. Time resolved in situ X-ray tomographic
microscopy unraveling dynamic processes in geologic systems.
Frontiers in Earth Science 7, 346. doi: 310.3389/feart.2019.
00346.
Schiffbauer, J.D., Selly, T., Jacquet, S.M., Merz, R.A., Nelson,
L.L., Strange, M.A., Cai, Y., Smith, E.F., 2020. Discovery of
bilaterian-type through-guts in cloudinomorphs from the terminal
Ediacaran Period. Nature Communications 11, 205.
Stewart, T.A., Lemberg, J.B., Taft, N.K., Yoo, I., Daeschler,
E.B., Shubin, N.H., 2020. Fin ray patterns at the fin-to-limb
transition. Proceedings of the National Academy of Sciences 117,
1612-1620.
Zhang, W., Liang, J., Wei, J., Lu, J.a., Su, P., Lin, L., Huang,
W., Guo, Y., Deng, W., Yang, X., Wan, Z., 2020. Geological and
geophysical features of and controls on occurrence and accumulation
of gas hydrates in the first offshore gas-hydrate production test
region in the Shenhu area, Northern South China Sea. Marine and
Petroleum Geology 114, 104191.
Liquid Chromatography/LC-MS/SFC
Bernardin, M., Masle, A.L., Bessueille-Barbier, F., Lienemann,
C.-P., Heinisch, S., 2020. Comprehensive two-dimensional liquid
chromatography with inductively coupled plasma mass spectrometry
detection for the characterization of sulfur, vanadium and nickel
compounds in petroleum products. Journal of Chromatography A 1611,
460605.
Broeckhoven, K., Desmet, G., 2020. Advances and challenges in
extremely high-pressure liquid chromatography in current and future
analytical scale column formats. Analytical Chemistry 92,
554-560.
Caputo, M., Lyles, J.T., Salazar, M., Quave, C.L., 2020. LEGO
MINDSTORMS fraction collector: A low-cost tool for a preparative
high performance liquid chromatography system. Analytical Chemistry
92, 1687-1690.
Cerrato, A., Cannazza, G., Capriotti, A.L., Citti, C., La
Barbera, G., Laganà, A., Montone, C.M., Piovesana, S., Cavaliere,
C., 2020. A new software-assisted analytical workflow based on
high-resolution mass spectrometry for the systematic study of
phenolic compounds in complex matrices. Talanta 209, 120573.
Hohrenk, L.L., Itzel, F., Baetz, N., Tuerk, J., Vosough, M.,
Schmidt, T.C., 2020. Comparison of software tools for liquid
chromatography–high-resolution mass spectrometry data processing in
nontarget screening of environmental samples. Analytical Chemistry
92, 1898-1907.
Kaplitz, A.S., Kresge, G.A., Selover, B., Horvat, L., Franklin,
E.G., Godinho, J.M., Grinias, K.M., Foster, S.W., Davis, J.J.,
Grinias, J.P., 2020. High-throughput and ultrafast liquid
chromatography. Analytical Chemistry 92, 67-84.
Korf, A., Fouquet, T., Schmid, R., Hayen, H., Hagenhoff, S.,
2020. Expanding the Kendrick mass plot toolbox in MZmine 2 to
enable rapid polymer characterization in liquid chromatography−mass
spectrometry data sets. Analytical Chemistry 92, 628-633.
Koshel, B., Birdsall, R., Chen, W., 2020. Two-dimensional liquid
chromatography coupled to mass spectrometry for impurity analysis
of dye-conjugated oligonucleotides. Journal of Chromatography B
1137, 121906.
Melnikov, A.D., Tsentalovich, Y.P., Yanshole, V.V., 2020. Deep
learning for the precise peak detection in high-resolution LC–MS
data. Analytical Chemistry 92, 588-592.
Ovchinnikov, D.V., Pokrovskiy, O.I., Kosyakov, D.S., Bogolitsyn,
K.G., Ul'yanovskii, N.V., Falev, D.I., 2020. Evaluation of
temperature and pressure effects on retention in supercritical
fluid chromatography on polar stationary phases. Journal of
Chromatography A 1610, 460600.
Pham, H.-T.-T., Kim, H.-W., Han, S., Ryu, B., Doan, T.-P., An,
J.-P., Tran, V.-O., Oh, W.-K., 2019. Development of a building
block strategy to target the classification, identification, and
metabolite profiling of oleanane triterpenoids in Gymnema sylvestre
using UHPLC-qTOF/MS. Journal of Natural Products 82, 3249-3266.
Reymond, C., Dubuis, A., Le Masle, A., Colas, C., Chahen, L.,
Destandau, E., Charon, N., 2020. Characterization of liquid–liquid
extraction fractions from lignocellulosic biomass by high
performance liquid chromatography hyphenated to tandem
high-resolution mass spectrometry. Journal of Chromatography A
1610, 460569.
Sorensen, M.J., Miller, K.E., Jorgenson, J.W., Kennedy, R.T.,
2020. Ultrahigh-Performance capillary liquid chromatography-mass
spectrometry at 35 kpsi for separation of lipids. Journal of
Chromatography A 1611, 460575.
Yu, Y., Li, G., Wu, D., Liu, J., Chen, J., Hu, N., Wang, H.,
Wang, P., Wu, Y., 2020. Thiol radical-based chemical isotope
labelling for sterols quantitation through high performance liquid
chromatography-tandem mass spectrometry analysis. Analytica Chimica
Acta 1097, 110-119.
Zhou, H., Chen, J., Li, H., Quan, K., Zhang, Y., Qiu, H., 2020.
Imidazolium ionic liquid-enhanced poly(quinine)-modified silica as
a new multi-mode chromatographic stationary phase for separation of
achiral and chiral compounds. Talanta 211, 120743.
Zyakun, A.M., Kochetkov, V.V., Zakharchenko, V.N., Baskunov,
B.P., Peshenko, V.P., Laurinavichius, K.S., Siunova, T.V.,
Anokhina, T.O., Boronin, A.M., 2019. Application of
high-performance liquid chromatography/high resolution mass
spectrometry to the investigation of the biodegradation and
transformation of phenanthrene by a plasmid bearing rhizosphere
bacteria Pseudomonas aureofaciens. Journal of Analytical Chemistry
74, 1355-1361.
Mass Spectroscopy/ICR-FTMS/Orbitrap
Arevalo Jr, R., Ni, Z., Danell, R.M., 2020. Mass spectrometry
and planetary exploration: A brief review and future projection.
Journal of Mass Spectrometry 55, e4454.
Gautier, T., Danger, G., Mousis, O., Duvernay, F., Vuitton, V.,
Flandinet, L., Thissen, R., Orthous-Daunay, F.R., Ruf, A.,
Chiavassa, T., d'Hendecourt, L.S., 2020. Laboratory experiments to
unveil the molecular reactivity occurring during the processing of
ices in the protosolar nebula. Earth and Planetary Science Letters
531, 116011.
Han, Y., Poetz, S., Mahlstedt, N., Horsfield, B., 2020. On the
release of acidic NSO compounds from the oil-mature Barnett Shale
using different solvents. Journal of Petroleum Science and
Engineering 185, 106605.
Liu, Y., Ye, Q., Huang, W.-L., Feng, L., Wang, Y.-H., Xie, Z.,
Yong, S.-S., Zhang, S., Jiang, B., Zheng, Y., Wang, J.-J., 2020.
Spectroscopic and molecular-level characteristics of dissolved
organic matter in the Pearl River Estuary, South China. Science of
The Total Environment 710, 136307.
Miranda, M.L., Osterholz, H., Giebel, H.A., Bruhnke, P.,
Dittmar, T., Zielinski, O., 2020. Impact of UV radiation on DOM
transformation on molecular level using FT-ICR-MS and PARAFAC.
Spectrochimica Acta Part A: Molecular and Biomolecular Spectroscopy
230, 118027.
Nunes, V.O., Silva, R.V.S., Romeiro, G.A., Azevedo, D.A., 2020.
The speciation of the organic compounds of slow pyrolysis bio-oils
from Brazilian tropical seed cake fruits using high-resolution
techniques: GC × GC-TOFMS and ESI(±)-Orbitrap HRMS. Microchemical
Journal 153, 104514.
Qi, Y., Fu, P., Li, S., Ma, C., Liu, C., Volmer, D.A., 2020.
Assessment of molecular diversity of lignin products by various
ionization techniques and high-resolution mass spectrometry.
Science of The Total Environment 713, 136573.
Reymond, C., Dubuis, A., Le Masle, A., Colas, C., Chahen, L.,
Destandau, E., Charon, N., 2020. Characterization of liquid–liquid
extraction fractions from lignocellulosic biomass by high
performance liquid chromatography hyphenated to tandem
high-resolution mass spectrometry. Journal of Chromatography A
1610, 460569.
Wang, H., Ge, D., Cheng, Z., Zhu, N., Yuan, H., Lou, Z., 2020.
Improved understanding of dissolved organic matter transformation
in concentrated leachate induced by hydroxyl radicals and reactive
chlorine species. Journal of Hazardous Materials 397, 121702.
Xu, L., Li, X., Wang, X., Song, A., Han, F., 2020. A feasible
strategy based on isotopic fine structures to enhance the
reliability of metabolite identification by Fourier transform ion
cyclotron resonance mass spectrometry. Rapid Communications in Mass
Spectrometry 34, e8560.
Yu, K., Duan, Y., Gan, Y., Zhang, Y., Zhao, K., 2020.
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Zhang, P., Huang, P., Xu, X., Sun, H., Jiang, B., Liao, Y.,
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Zhang, Y.-Y., Wei, X.-Y., Lv, J.-H., Jiang, H., Liu, F.-J., Liu,
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Mass Spectroscopy/Other
Arevalo Jr, R., Ni, Z., Danell, R.M., 2020. Mass spectrometry
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Bittremieux, W., 2020. spectrum_utils: A Python package for mass
spectrometry data processing and visualization. Analytical
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Chen, X., Zhu, L., Cui, C., Zhu, Y., Zhou, Z., Qi, F., 2020. In
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Analytical Chemistry 92, 603-606.
Colby, S.M., Nuñez, J.R., Hodas, N.O., Corley, C.D., Renslow,
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libraries and candidate molecules for small molecule identification
in complex samples. Analytical Chemistry 92, 1720-1729.
Fouquet, T.N.J., 2019. The Kendrick analysis for polymer mass
spectrometry. Journal of Mass Spectrometry 54, 933-947.
Gorman, B.L., Kraft, M.L., 2020. High-resolution secondary ion
mass spectrometry analysis of cell membranes. Analytical Chemistry
92, 1645-1652.
Kwok, H., Yan, J., Brunswick, P., McMaster, M., Evans, M., Kim,
M., Helbing, C., van Aggelen, G., Shang, D., 2020. Ultra trace
simultaneous determination of 50 polycyclic aromatic hydrocarbons
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Long, T., Clement, S.W.J., Xie, H., Liu, D., 2020. Design,
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Pérez-Guaita, D., Quintás, G., Kuligowski, J., 2020.
Discriminant analysis and feature selection in mass spectrometry
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Piehowski, P.D., Zhu, Y., Bramer, L.M., Stratton, K.G., Zhao,
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proteins from tissue sections at 100-μm spatial resolution. Nature
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Rahi, P., Vaishampayan, P., 2020. Editorial: MALDI-TOF MS
application in microbial ecology studies. Frontiers in Microbiology
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2020. Instrumental improvements for the trace analysis of
structural isomers of polycyclic aromatic hydrocarbons with
molecular mass 302 Da. Analytica Chimica Acta 1100, 163-173.
Shi, X., Qiu, X., Cheng, Z., Chen, Q., Rudich, Y., Zhu, T.,
2020. Isomeric identification of particle-phase organic nitrates
through gas chromatography and time-of-flight mass spectrometry
coupled with an electron capture negative ionization source.
Environmental Science & Technology 54, 707-713.
Wang, T., Cheng, X., Xu, H., Meng, Y., Yin, Z., Li, X., Hang,
W., 2020. Perspective on advances in laser-based high-resolution
mass spectrometry imaging. Analytical Chemistry 92, 543-553.
Wu, Q., Wang, J.-Y., Han, D.-Q., Yao, Z.-P., 2020. Recent
advances in differentiation of isomers by ion mobility mass
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Metabolomics/Lipidomics
Arif, M., Bai, Y., Usman, M., Jalalah, M., Harraz, F.A.,
Al-Assiri, M.S., Li, X., Salama, E.-S., Zhang, C., 2020. Highest
accumulated microalgal lipids (polar and non-polar) for biodiesel
production with advanced wastewater treatment: Role of lipidomics.
Bioresource Technology 298, 122299.
Coffinet, S.C., Meador, T.B., Mühlena, L., Becker, K.W.,
Schröder, J., Zhu, Q.-Z., Lipp, J.S., Heuer, V.B., Crump, M.P.,
Hinrichs, K.-U., 2020. Structural elucidation and environmental
distributions of butanetriol and pentanetriol dialkyl glycerol
tetraethers (BDGTs and PDGTs). Biogeosciences 17, 317-330.
Colby, S.M., Nuñez, J.R., Hodas, N.O., Corley, C.D., Renslow,
R.R., 2020. Deep learning to generate in silico chemical property
libraries and candidate molecules for small molecule identification
in complex samples. Analytical Chemistry 92, 1720-1729.
de Sousa, J., Vencálek, O., Hron, K., Václavík, J., Friedecký,
D., Adam, T., 2020. Bayesian multiple hypotheses testing in
compositional analysis of untargeted metabolomic data. Analytica
Chimica Acta 1097, 49-61.
González-Riano, C., Dudzik, D., Garcia, A., Gil-de-la-Fuente,
A., Gradillas, A., Godzien, J., López-Gonzálvez, Á., Rey-Stolle,
F., Rojo, D., Ruperez, F.J., Saiz, J., Barbas, C., 2020. Recent
developments along the analytical process for metabolomics
workflows. Analytical Chemistry 92, 203-226.
Griffiths, W., Wang, Y. (eds), 2020. Lipidomics: Current and
Emerging Techniques New Developments in Mass Spectrometry. Royal
Society of Chemistry, 288 pp.
Grissa, D., Comte, B., Pétéra, M., Pujos-Guillot, E., Napoli,
A., 2020. A hybrid and exploratory approach to knowledge discovery
in metabolomic data. Discrete Applied Mathematics 273, 103-116.
Kaplitz, A.S., Kresge, G.A., Selover, B., Horvat, L., Franklin,
E.G., Godinho, J.M., Grinias, K.M., Foster, S.W., Davis, J.J.,
Grinias, J.P., 2020. High-throughput and ultrafast liquid
chromatography. Analytical Chemistry 92, 67-84.
Melnikov, A.D., Tsentalovich, Y.P., Yanshole, V.V., 2020. Deep
learning for the precise peak detection in high-resolution LC–MS
data. Analytical Chemistry 92, 588-592.
Rahi, P., Vaishampayan, P., 2020. Editorial: MALDI-TOF MS
application in microbial ecology studies. Frontiers in Microbiology
10, 2954. doi: 2910.3389/fmicb.2019. 02954.
Sorensen, M.J., Miller, K.E., Jorgenson, J.W., Kennedy, R.T.,
2020. Ultrahigh-Performance capillary liquid chromatography-mass
spectrometry at 35 kpsi for separation of lipids. Journal of
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Sun, Q., Fan, T.W.M., Lane, A.N., Higashi, R.M., 2020.
Applications of chromatography-ultra high-resolution MS for stable
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networks. TrAC Trends in Analytical Chemistry 123, 115676.
Xia, J.-M., Hu, X.-M., Huang, C.-H., Yu, L.-B., Xu, R.-F., Tang,
X.-X., Lin, D.-H., 2020. Metabolic profiling of cold adaptation of
a deep-sea psychrotolerant Microbacterium sediminis to prolonged
low temperature under high hydrostatic pressure. Applied
Microbiology and Biotechnology 104, 277-289.
Xu, L., Li, X., Wang, X., Song, A., Han, F., 2020. A feasible
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Spectrometry 34, e8560.
Zhao, J., Wang, G., Chu, J., Zhuang, Y., 2019. Harnessing
microbial metabolomics for industrial applications. World Journal
of Microbiology and Biotechnology 36, 1.
Puppyomics
Ameen, C., Feuerborn, T.R., Brown, S.K., Linderholm, A.,
Hulme-Beaman, A., Lebrasseur, O., Sinding, M.-H.S., Lounsberry,
Z.T., Lin, A.T., Appelt, M., Bachmann, L., Betts, M., Britton, K.,
Darwent, J., Dietz, R., Fredholm, M., Gopalakrishnan, S.,
Goriunova, O.I., Grønnow, B., Haile, J., Hallsson, J.H., Harrison,
R., Heide-Jørgensen, M.P., Knecht, R., Losey, R.J., Masson-MacLean,
E., McGovern, T.H., McManus-Fry, E., Meldgaard, M., Midtdal, Å.,
Moss, M.L., Nikitin, I.G., Nomokonova, T., Pálsdóttir, A.H., Perri,
A., Popov, A.N., Rankin, L., Reuther, J.D., Sablin, M., Schmidt,
A.L., Shirar, S., Smiarowski, K., Sonne, C., Stiner, M.C.,
Vasyukov, M., West, C.F., Ween, G.B., Wennerberg, S.E., Wiig, Ø.,
Woollett, J., Dalén, L., Hansen, A.J., P. Gilbert, M.T., Sacks,
B.N., Frantz, L., Larson, G., Dobney, K., Darwent, C.M., Evin, A.,
2019. Specialized sledge dogs accompanied Inuit dispersal across
the North American Arctic. Proceedings of the Royal Society B:
Biological Sciences 286, 20191929.
Root-Gutteridge, H., Ratcliffe, V.F., Korzeniowska, A.T., Reby,
D., 2019. Dogs perceive and spontaneously normalize formant-related
speaker and vowel differences in human speech sounds. Biology
Letters 15, 20190555.
Archaeological/Art Organic Chemistry
Azevedo, V., Stríkis, N.M., Santos, R.A., de Souza, J.G.,
Ampuero, A., Cruz, F.W., de Oliveira, P., Iriarte, J., Stumpf,
C.F., Vuille, M., Mendes, V.R., Cheng, H., Edwards, R.L., 2019.
Medieval climate variability in the eastern Amazon-Cerrado regions
and its archeological implications. Scientific Reports 9,
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Bartelink, E.J., Beasley, M.M., Eerkens, J.W., Gardner, K.S.,
Wiberg, R.S., Garibay, R., 2020. Stable isotope evidence of diet
breadth expansion and regional dietary variation among
Middle-to-Late Holocene Hunter-Gatherers of Central California.
Journal of Archaeological Science: Reports 29, 102182.
Cardona, P.-J., Català, M., Prats, C., 2020. Origin of
tuberculosis in the Paleolithic predicts unprecedented population
growth and female resistance. Scientific Reports 10, 42.
Cojoc, L.R., Enache, M.I., Neagu, S.E., Lungulescu, M.,
Setnescu, R., Ruginescu, R., Gomoiu, I., 2019. Carotenoids produced
by halophilic bacterial strains on mural paintings and laboratory
conditions. FEMS Microbiology Letters 366, fnz243.
Fernández-Crespo, T., Snoeck, C., Ordoño, J., de Winter, N.J.,
Czermak, A., Mattielli, N., Lee-Thorp, J.A., Schulting, R.J., 2020.
Multi-isotope evidence for the emergence of cultural alterity in
Late Neolithic Europe. Science Advances 6, eaay2169.
Fu, Y., Chen, Z., Zhou, S., Wei, S., 2020. Comparative study of
the materials and lacquering techniques of the lacquer objects from
Warring States Period China. Journal of Archaeological Science 114,
105060.
Holakooei, P., Karimy, A.-H., Saeidi-Anaraki, F., Vaccaro, C.,
Sabatini, F., Degano, I., Colombini, M.P., 2020. Colourants on the
wall paintings of a mediӕval fortress at the mount Sofeh in
Isfahan, central Iran. Journal of Archaeological Science: Reports
29, 102065.
Moore, J., Rose, A., Anderson, S., Evans, J., Nowell, G.,
Gröcke, D.R., Pashley, V., Kirby, M., Montgomery, J., 2020. A
multi-isotope (C, N, O, Sr, Pb) study of Iron Age and Roman period
skeletons from east Edinburgh, Scotland exploring the relationship
between decapitation burials and geographical origins. Journal of
Archaeological Science: Reports 29, 102075.
Petrone, P., Pucci, P., Niola, M., Baxter, P.J., Fontanarosa,
C., Giordano, G., Graziano, V., Sirano, F., Amoresano, A., 2020.
Heat-induced brain vitrification from the Vesuvius eruption in c.e.
79. New England Journal of Medicine 382, 383-384.
Plecerová, A., Kaupová Drtikolová, S., Šmerda, J., Stloukal, M.,
Velemínský, P., 2020. Dietary reconstruction of the Moravian
Lombard population (Kyjov, 5th–6th centuries AD, Czech Republic)
through stable isotope analysis (δ13C, δ15N). Journal of
Archaeological Science: Reports 29, 102062.
Ramsøe, A., van Heekeren, V., Ponce, P., Fischer, R., Barnes,
I., Speller, C., Collins, M.J., 2020. DeamiDATE 1.0: Site-specific
deamidation as a tool to assess authenticity of members of ancient
proteomes. Journal of Archaeological Science 115, 105080.
Stacey, R.J., Dunne, J., Brunning, S., Devièse, T., Mortimer,
R., Ladd, S., Parfitt, K., Evershed, R., Bull, I., 2020. Birch bark
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technological revival? Journal of Archaeological Science: Reports
29, 102118.
Tomczyk, J., Regulski, P., Lisowska-Gaczorek, A., Szostek, K.,
2020. Dental caries and stable isotopes analyses in the
reconstruction of diet in Mesolithic (6815–5900 BC) individuals
from Northeastern Poland. Journal of Archaeological Science:
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Voskos, I., Vika, E., 2020. Prehistoric human remains reviewed:
Palaeopathology and palaeodiet in Neolithic and Chalcolithic
Cyprus, Limassol district. Journal of Archaeological Science:
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Wadley, L., Backwell, L., d’Errico, F., Sievers, C., 2020.
Cooked starchy rhizomes in Africa 170 thousand years ago. Science
367, 87-91.
Zhu, Z., Yu, C., Luo, W., Miao, Y., Lu, Z., Liu, L., Yang, J.,
2020. Accurate identification of the pastry contained in a ceramic
pot excavated from Jurou Li's grave from the Jin dynasty (1115–1234
ce) in Xi'an, Shaanxi, China. Archaeometry 62, 130-140.
Biochemistry
Bižić, M., Klintzsch, T., Ionescu, D., Hindiyeh, M.Y., Günthel,
M., Muro-Pastor, A.M., Eckert, W., Urich, T., Keppler, F.,
Grossart, H.P., 2020. Aquatic and terrestrial cyanobacteria produce
methane. Science Advances 6, eaax5343.
Culka, A., Košek, F., Oren, A., Mana, L., Jehlička, J., 2019.
Detection of carotenoids of halophilic prokaryotes in solid
inclusions inside laboratory-grown chloride and sulfate crystals
using a portable Raman spectrometer: applications for Mars
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DasSarma, S., DasSarma, P., Laye, V.J., Schwieterman, E.W.,
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strategies and pigments for remote sensing. Extremophiles 24,
31-41.
Guzmán-Trampe, S.M., Ikeda, H., Vinuesa, P., Macías-Rubalcava,
M.L., Esquivel, B., Centeno-Leija, S., Tapia-Cabrera, S.M.,
Mora-Herrera, S.I., Ruiz-Villafán, B., Rodríguez-Sanoja, R.,
Sanchez, S., 2020. Production of distinct labdane-type diterpenoids
using a novel cryptic labdane-like cluster from Streptomyces
thermocarboxydus K155. Applied Microbiology and Biotechnology 104,
741-750.
Holert, J., Brown, K., Hashimi, A., Eltis, L.D., Mohn, W.W.,
2020. Steryl ester formation and accumulation in steroid-degrading
bacteria. Applied and Environmental Microbiology 86,
e02353-02319.
Johnsen, U., Sutter, J.-M., Reinhardt, A., Pickl, A., Wang, R.,
Xiang, H., Schönheit, P., 2020. D-Ribose catabolism in archaea:
Discovery of a novel oxidative pathway in Haloarcula species.
Journal of Bacteriology 202, e00608-00619.
Kato, K., Shinoda, T., Nagao, R., Akimoto, S., Suzuki, T.,
Dohmae, N., Chen, M., Allakhverdiev, S.I., Shen, J.-R., Akita, F.,
Miyazaki, N., Tomo, T., 2020. Structural basis for the adaptation
and function of chlorophyll f in photosystem I. Nature
Communications 11, 238.
Larson, B.T., Ruiz-Herrero, T., Lee, S., Kumar, S., Mahadevan,
L., King, N., 2020. Biophysical principles of choanoflagellate
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Le, T., Žárský, V., Nývltová, E., Rada, P., Harant, K., Vancová,
M., Verner, Z., Hrdý, I., Tachezy, J., 2020. Anaerobic peroxisomes
in Mastigamoeba balamuthi. Proceedings of the National Academy of
Sciences 117, 2065-2075.
Liu, X., Jing, X., Ye, Y., Zhan, J., Ye, J., Zhou, S., 2020.
Bacterial vesicles mediate extracellular electron transfer.
Environmental Science & Technology Letters 7, 27-34.
Ma, X., Meng, L., Zhang, H., Zhou, L., Yue, J., Zhu, H., Yao,
R., 2020. Sophorolipid biosynthesis and production from diverse
hydrophilic and hydrophobic carbon substrates. Applied Microbiology
and Biotechnology 104, 77-100.
Marcone, G.L., Rosini, E., Crespi, E., Pollegioni, L., 2020.
D-amino acids in foods. Applied Microbiology and Biotechnology 104,
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Orsi, W.D., Vuillemin, A., Rodriguez, P., Coskun, Ö.K.,
Gomez-Saez, G.V., Lavik, G., Morholz, V., Ferdelman, T.G., 2020.
Metabolic activity analyses demonstrate that Lokiarchaeon exhibits
homoacetogenesis in sulfidic marine sediments. Nature Microbiology
5, 248-255.
Pfeiffer, D., Schüler, D., 2020. Quantifying the benefit of a
dedicated “magnetoskeleton” in bacterial magnetotaxis by live-cell
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Environmental Microbiology 86, e01976-01919.
Teixeira, L.R., Cordas, C.M., Fonseca, M.P., Duke, N.E.C.,
Pokkuluri, P.R., Salgueiro, C.A., 2020. Modulation of the redox
potential and electron/proton transfer mechanisms in the outer
membrane cytochrome OmcF from Geobacter sulfurreducens. Frontiers
in Microbiology 10, 2941. doi: 2910.3389/fmicb.2019. 02941.
Vo, N.N.Q., Nomura, Y., Muranaka, T., Fukushima, E.O., 2019.
Structure–activity relationships of pentacyclic triterpenoids as
inhibitors of cyclooxygenase and lipoxygenase enzymes. Journal of
Natural Products 82, 3311-3320.
Zhou, A., Weber, Y., Chiu, B.K., Elling, F.J., Cobban, A.B.,
Pearson, A., Leavitt, W.D., 2020. Energy flux controls tetraether
lipid cyclization in Sulfolobus acidocaldarius. Environmental
Microbiology 22, 343-353.
Biodegradation
Balfourier, A., Luciani, N., Wang, G., Lelong, G., Ersen, O.,
Khelfa, A., Alloyeau, D., Gazeau, F., Carn, F., 2020. Unexpected
intracellular biodegradation and recrystallization of gold
nanoparticles. Proceedings of the National Academy of Sciences 117,
103-113.
Boll, M., Geiger, R., Junghare, M., Schink, B., 2020. Microbial
degradation of phthalates: biochemistry and environmental
implications. Environmental Microbiology Reports 12, 3-15.
Cerqueda-García, D., García-Maldonado, J.Q., Aguirre-Macedo, L.,
García-Cruz, U., 2020. A succession of marine bacterial communities
in batch reactor experiments during the degradation of five
different petroleum types. Marine Pollution Bulletin 150,
110775.
Cierniak, D., Woźniak-Karczewska, M., Parus, A., Wyrwas, B.,
Loibner, A.P., Heipieper, H.J., Ławniczak, Ł., Chrzanowski, Ł.,
2020. How to accurately assess surfactant biodegradation-impact of
sorption on the validity of results. Applied Microbiology and
Biotechnology 104, 1-12.
Hackbusch, S., Noirungsee, N., Viamonte, J., Sun, X., Bubenheim,
P., Kostka, J.E., Müller, R., Liese, A., 2020. Influence of
pressure and dispersant on oil biodegradation by a newly isolated
Rhodococcus strain from deep-sea sediments of the Gulf of Mexico.
Marine Pollution Bulletin 150, 110683.
Jacquemot, P., Viennet, J.-C., Bernard, S., Le Guillou, C.,
Rigaud, B., Delbes, L., Georgelin, T., Jaber, M., 2019. The
degradation of organic compounds impacts the crystallization of
clay minerals and vice versa. Scientific Reports 9, 20251.
Li, Z., Huang, H., Zhang, S., 2020. The effect of biodegradation
on bound biomarkers released from intermediate-temperature
gold-tube pyrolysis of severely biodegraded Athabasca bitumen. Fuel
263, 116669.
Liu, Y., Wang, W., Shah, S.B., Zanaroli, G., Xu, P., Tang, H.,
2020. Phenol biodegradation by Acinetobacter radioresistens APH1
and its application in soil bioremediation. Applied Microbiology
and Biotechnology 104, 427-437.
Ngueleu, S.K., Al-Raoush, R.I., Shafieiyoun, S., Rezanezhad, F.,
Van Cappellen, P., 2019. Biodegradation kinetics of benzene and
naphthalene in the vadose and saturated zones of a (semi)-arid
saline coastal soil environment. Geofluids 2019, 8124716.
Payandi-Rolland, D., Shirokova, L.S., Nakhle, P., Tesfa, M.,
Abdou, A., Causserand, C., Lartiges, B., Rols, J.-L., Guérin, F.,
Bénézeth, P., Pokrovsky, O.S., 2020. Aerobic release and
biodegradation of dissolved organic matter from frozen peat:
Effects of temperature and heterotrophic bacteria. Chemical Geology
536, 119448.
Peng, C., Tang, Y., Yang, H., He, Y., Liu, Y., Liu, D., Qian,
Y., Lu, L., 2020. Time- and compound-dependent microbial community
compositions and oil hydrocarbon degrading activities in seawater
near the Chinese Zhoushan Archipelago. Marine Pollution Bulletin
152, 110907.
Sun, P., Cai, C., Tang, Y., Tao, Z., Zhao, W., 2020. A new
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Vila, J., Tian, Z., Wang, H., Bodnar, W., Aitken, M.D., 2020.
Isomer-selective biodegradation of high-molecular-weight azaarenes
in PAH-contaminated environmental samples. Science of The Total
Environment 707, 135503.
Biodegradation Pathways/Genomics
Cao, H., Wang, C., Liu, H., Jia, W., Sun, H., 2020. Enzyme
activities during benzo[a]pyrene degradation by the fungus
Lasiodiplodia theobromae isolated from a polluted soil. Scientific
Reports 10, 865.
Liu, W.-W., Pan, J., Feng, X., Li, M., Xu, Y., Wang, F., Zhou,
N.-Y., 2020. Evidences of aromatic degradation dominantly via the
phenylacetic acid pathway in marine benthic Thermoprofundales.
Environmental Microbiology 22, 329-342.
Martín-Cabello, G., Terrón-González, L., Ferrer, M., Santero,
E., 2020. Identification of a complete dibenzothiophene
biodesulfurization operon and its regulator by functional
metagenomics. Environmental Microbiology 22, 91-106.
Miyazawa, D., Thanh, L.T.H., Tani, A., Shintani, M., Loc, N.H.,
Hatta, T., Kimbara, K., 2019. Isolation and characterization of
genes responsible for naphthalene degradation from thermophilic
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Oshlag, J.Z., Ma, Y., Morse, K., Burger, B.T., Lemke, R.A.,
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Anaerobic degradation of syringic acid by an adapted strain of
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Wang, S., Li, S., Du, D., Wang, D., Yan, W., 2020. Conjugative
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Xu, P., Du, H., Peng, X., Tang, Y., Zhou, Y., Chen, X., Fei, J.,
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aromatic hydrocarbons by laccase in reverse micelle system. Science
of The Total Environment 708, 134970.
Zyakun, A.M., Kochetkov, V.V., Zakharchenko, V.N., Baskunov,
B.P., Peshenko, V.P., Laurinavichius, K.S., Siunova, T.V.,
Anokhina, T.O., Boronin, A.M., 2019. Application of
high-performance liquid chromatography/high resolution mass
spectrometry to the investigation of the biodegradation and
transformation of phenanthrene by a plasmid bearing rhizosphere
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Biofuels/Biomass/Bioengineering
Abraham, A., Mathew, A.K., Park, H., Choi, O., Sindhu, R.,
Parameswaran, B., Pandey, A., Park, J.H., Sang, B.-I., 2020.
Pretreatment strategies for enhanced biogas production from
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Ali, N., Zhang, Q., Liu, Z.-Y., Li, F.-L., Lu, M., Fang, X.-C.,
2020. Emerging technologies for the pretreatment of lignocellulosic
materials for bio-based products. Applied Microbiology and
Biotechnology 104, 455-473.
Arif, M., Bai, Y., Usman, M., Jalalah, M., Harraz, F.A.,
Al-Assiri, M.S., Li, X., Salama, E.-S., Zhang, C., 2020. Highest
accumulated microalgal lipids (polar and non-polar) for biodiesel
production with advanced wastewater treatment: Role of lipidomics.
Bioresource Technology 298, 122299.
Bhatia, S.K., Jagtap, S.S., Bedekar, A.A., Bhatia, R.K., Patel,
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Y.-H., 2020. Recent developments in pretreatment technologies on
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Astrobiology
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Environmental Geochemistry
Buzmakov, S.A., Khotyanovskaya, Y.V., 2020. Degradation and
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Dix, B., de Bruin, J., Roosenbrand, E., Vlemmix, T., Francoeur,
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Fernandes, C., Khandeparker, R.D.S., Shenoy, B.D., 2020. High
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Gdara, I., Zrafi, I., Balducci, C., Cecinato, A., Ghrabi, A.,
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sources assessment of aliphatic hydrocarbon in waters and sediments
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Gunsch, M.J., Liu, J., Moffett, C.E., Sheesley, R.J., Wang, N.,
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Kwok, H., Yan, J., Brunswick, P., McMaster, M., Evans, M., Kim,
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Marine Pollution Bulletin 150, 110590.
Roebuck, J.A., Seidel, M., Dittmar, T., Jaffé, R., 2020.
Controls of land use and the river continuum concept on dissolved
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Wang, H., Ge, D., Cheng, Z., Zhu, N., Yuan, H., Lou, Z., 2020.
Improved understanding of dissolved organic matter transformation
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Wang, H., Li, H., Sun, K., Huang, H., Zhu, P., Lu, Z., 2020.
Impact of exogenous nitrogen on the cyanobacterial abundance and
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Wisen, J., Chesnaux, R., Werring, J., Wendling, G., Baudron, P.,
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Anthropogenic influences on dissolved organic matter transport in
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Yu, X., Millet, D.B., Wells, K.C., Griffis, T.J., Chen, X.,
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Bioremediation
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Sylvan, J.B., Sericano, J.L., Gold, G., Quigg, A., Knap, A.H.,
2020. Biological response to dissolved versus dispersed oil. Marine
Pollution Bulletin 150, 110713.
Cao, H., Wang, C., Liu, H., Jia, W., Sun, H., 2020. Enzyme
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Lasiodiplodia theobromae isolated from a polluted soil. Scientific
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Cerqueda-García, D., García-Maldonado, J.Q., Aguirre-Macedo, L.,
García-Cruz, U., 2020. A succession of marine bacterial communities
in batch reactor experiments during the degradation of five
different petroleum types. Marine Pollution Bulletin 150,
110775.
Ibrahim, I.M., Konnova, S.A., Sigida, E.N., Lyubun, E.V.,
Muratova, A.Y., Fedonenko, Y.P., Elbanna, К., 2020. Bioremediation
potential of a halophilic Halobacillus sp. strain, EG1HP4QL:
exopolysaccharide production, crude oil degradation, and heavy
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Kreling, N.E., Zaparoli, M., Margarites, A.C., Friedrich, M.T.,
Thomé, A., Colla, L.M., 2020. Extracellular biosurfactants from
yeast and soil–biodiesel interactions during bioremediation.
International Journal of Environmental Science and Technology 17,
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Liu, Y., Wang, W., Shah, S.B., Zanaroli, G., Xu, P., Tang, H.,
2020. Phenol biodegradation by Acinetobacter radioresistens APH1
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Phillips, E., Gilevska, T., Horst, A., Manna, J., Seger, E.,
Lutz, E.J., Norcross, S., Morgan, S.A., West, K.A., Mack, E.E.,
Dworatzek, S., Webb, J., Sherwood Lollar, B., 2020. Transformation
of chlorofluorocarbons investigated via stable carbon
compound-specific isotope analysis. Environmental Science &
Technology 54, 870-878.
Qiao, W., Puentes Jácome, L.A., Tang, X., Lomheim, L., Yang,
M.I., Gaspard, S., Avanzi, I.R., Wu, J., Ye, S., Edwards, E.A.,
2020. Microbial communities associated with sustained anaerobic
reductive dechlorination of α-, β-, γ-, and δ-hexachlorocyclohexane
isomers to monochlorobenzene and benzene. Environmental Science
& Technology 54, 255-265.
Þorsteinsdóttir, G.V., Blischke, A., Sigurbjörnsdóttir, M.A.,
Òskarsson, F., Arnarson, Þ.S., Magnússon, K.P., Vilhelmsson, O.,
2019. Gas seepage pockmark microbiomes suggest the presence of
sedimentary coal seams in the Öxarfjörður graben of northeastern
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Shi, D., Bera, G., Knap, A.H., Quigg, A., Al Atwah, I.,
Gold-Bouchot, G., Wade, T.L., 2020. A mesocosm experiment to
determine half-lives of individual hydrocarbons in simulated oil
spill scenarios with and without the dispersant, Corexit. Marine
Pollution Bulletin 151, 110804.
Vasilyeva, G., Kondrashina, V., Strijakova, E., Ortega-Calvo,
J.-J., 2020. Adsorptive bioremediation of soil highly contaminated
with crude oil. Science of The Total Environment 706, 135739.
Wang, C., He, S., Zou, Y., Liu, J., Zhao, R., Yin, X., Zhang,
H., Li, Y., 2020. Quantitative evaluation of in-situ bioremediation
of compound pollution of oil and heavy metal in sediments from the
Bohai Sea, China. Marine Pollution Bulletin 150, 110787.
Deepwater Horizon/Macondo/Other Oil Spills
Bargar, T.A., Stout, S.A., Alvarez, D., 2020. Petroleum
hydrocarbons in semipermeable membrane devices deployed in the
Northern Gulf of Mexico and Florida keys following the Deepwater
Horizon incident. Marine Pollution Bulletin 150, 110622.
Chen, L., Yang, J., Wu, L., 2020. Modeling the dispersion of
dissolved natural gas condensates from the Sanchi incident. Journal
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Ferguson, A., Solo-Gabriele, H., Mena, K., 2020. Assessment for
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