Top Banner
7/21/2019 Validitas Multiplex Real Time Polymerase Chain Reaction http://slidepdf.com/reader/full/validitas-multiplex-real-time-polymerase-chain-reaction 1/24 REAL TIM E PCR KELOMPOK 9 DAYU PRATAMA SAYUTI DEWI RATIH DYAH AYU K  FIKA YUSTISI AMALIA NITA MEITHIYASARI NUR FADILAH RIA PUSPITA SUSI SUSANTI  TRI HANDAYANI
24

Validitas Multiplex Real Time Polymerase Chain Reaction

Mar 07, 2016

Download

Documents

Tri Handayani

pengenalan PCR
Welcome message from author
This document is posted to help you gain knowledge. Please leave a comment to let me know what you think about it! Share it to your friends and learn new things together.
Transcript
Page 1: Validitas Multiplex Real Time Polymerase Chain Reaction

7/21/2019 Validitas Multiplex Real Time Polymerase Chain Reaction

http://slidepdf.com/reader/full/validitas-multiplex-real-time-polymerase-chain-reaction 1/24

REAL TIM E PCR

KELOMPOK 9

DAYU PRATAMA SAYUTI

DEWI RATIH

DYAH AYU K 

FIKA YUSTISI AMALIA

NITA MEITHIYASARI

NUR FADILAH

RIA PUSPITA

SUSI SUSANTI

 TRI HANDAYANI

Page 2: Validitas Multiplex Real Time Polymerase Chain Reaction

7/21/2019 Validitas Multiplex Real Time Polymerase Chain Reaction

http://slidepdf.com/reader/full/validitas-multiplex-real-time-polymerase-chain-reaction 2/24

Pengertian Real Tim e-PCR

Secara U m um

 Real-Time PCR atau jua !ia"a

#i"e!ut $-PCR %$ua&titati'e PCR(me)u*a+a& "e!ua, met#e u&u+me&am*li.+a"i DNA/

 Te+&i+ i&i #iu&a+a& u&tu+me&am*li.+a"i%mem*e)!a&0a+("e+aliu" +ua&ti.+a"i %me&,itu&(

 jumala, ta)et mle+ul DNA ,a"il

am*li.+a"i te)"e!ut

Page 3: Validitas Multiplex Real Time Polymerase Chain Reaction

7/21/2019 Validitas Multiplex Real Time Polymerase Chain Reaction

http://slidepdf.com/reader/full/validitas-multiplex-real-time-polymerase-chain-reaction 3/24

Real time PCR !e)!e#a #e&a& PCR+&'e&"i&al/ Pe)!e#aa& Real Time PCR

#e&a& PCR +&'e&"i&al 1u+u* "i&i.+a&2#a)i ,al "e&"iti.ta" #a& +ua&tita"/

Pa#a PCR t)a#i"i&al2 1a)a #ete+"ime&u&a+a& ele+t)3)e"i" el !ai+aa)"a mau*u& *lia+)ilami#2 "e#a&+a&*a#a $-PCR #ete+"i me&u&a+a& "0"tem

4u)e"e&"/ Selai& itu *e&u&aa&4u)e"e&" i&i jua mem!e)i+a& "e&"iti.ta"0a& ti&i !ai $-PCR/

Page 4: Validitas Multiplex Real Time Polymerase Chain Reaction

7/21/2019 Validitas Multiplex Real Time Polymerase Chain Reaction

http://slidepdf.com/reader/full/validitas-multiplex-real-time-polymerase-chain-reaction 4/24

Prinsip Kerja Real Tim e PCR

Real Time me&i+uti *)i&"i* umum)ea+"i PCR2 utama&0a a#ala, DNA0a& tela, #iam*li.+a"i #i,itu&"etela, #ia+umula"i+a& #alam )ea+"i"e1a)a )eal time "e"u#a, "etia*"i+lu" am*li.+a"i "ele"ai

Page 5: Validitas Multiplex Real Time Polymerase Chain Reaction

7/21/2019 Validitas Multiplex Real Time Polymerase Chain Reaction

http://slidepdf.com/reader/full/validitas-multiplex-real-time-polymerase-chain-reaction 5/24

Alat real tim e PCR

Page 6: Validitas Multiplex Real Time Polymerase Chain Reaction

7/21/2019 Validitas Multiplex Real Time Polymerase Chain Reaction

http://slidepdf.com/reader/full/validitas-multiplex-real-time-polymerase-chain-reaction 6/24

Skem a pem eriksaan dengan real tim e pcr

Page 7: Validitas Multiplex Real Time Polymerase Chain Reaction

7/21/2019 Validitas Multiplex Real Time Polymerase Chain Reaction

http://slidepdf.com/reader/full/validitas-multiplex-real-time-polymerase-chain-reaction 7/24

Page 8: Validitas Multiplex Real Time Polymerase Chain Reaction

7/21/2019 Validitas Multiplex Real Time Polymerase Chain Reaction

http://slidepdf.com/reader/full/validitas-multiplex-real-time-polymerase-chain-reaction 8/24

Kurva Real tim e PCR

Page 9: Validitas Multiplex Real Time Polymerase Chain Reaction

7/21/2019 Validitas Multiplex Real Time Polymerase Chain Reaction

http://slidepdf.com/reader/full/validitas-multiplex-real-time-polymerase-chain-reaction 9/24

VALID ITAS M U LTIPLEX REAL

TIM E PO LYM ERASE CH AIN

REACTIO N 

U N TU K D IAG N O SIS

LIM FAD EN ITIS TU ERKU LO SISPAD A SPESIM EN LO K PARAFIN

Page 10: Validitas Multiplex Real Time Polymerase Chain Reaction

7/21/2019 Validitas Multiplex Real Time Polymerase Chain Reaction

http://slidepdf.com/reader/full/validitas-multiplex-real-time-polymerase-chain-reaction 10/24

Latar Belakang

Lim3a#e&iti" tu!e)+ul"i" me)u*a+a&tu!e)+ul"i" e+"t)a*a)u 0a& *ali&"e)i& #itemu+a&/ Peme)i+"aa&,i"t*atli ti#a+ mem!e)i+a&i&3)ma"i etili *a"ti *e&0e!a!lim3a#e&iti"2 *a#a,al lim3a#e&iti"

#a*at #i"e!a!+a& Mycobacteriumtuberculosis mau*u& Mycobacteriumnon tuberculosis yang sangat berbedaregimen terapinya.

Page 11: Validitas Multiplex Real Time Polymerase Chain Reaction

7/21/2019 Validitas Multiplex Real Time Polymerase Chain Reaction

http://slidepdf.com/reader/full/validitas-multiplex-real-time-polymerase-chain-reaction 11/24

K&.)ma"i #ia&"i" te)"a&+a lim3a#e&iti" T5mem*e)u&a+a& *eme)i+"aa& !a+te)i ta,a&a"am %5TA(2 ,i"t*atli2 atau me&u&a+a&te+&i+ real time polymerase chain reaction (RT-PCR).

Saat i&i te+&i+ RT-PCR #i*e)u&a+a& u&tu+me&#ete+"i Mycobacterium/ Peme)i+"aa&multiplex RT-PCR %M RT-PCR( me)u*a+a& alte)&ati3*eme)i+"aa& lim3a#e&iti" T5 "elai& "e1a)a

,i"t*atli2#a& tela, #ia*li+a"i+a& u&tu+#ete+"i "i+ue&" Mycobacterium deoxyribonucleicacid (DN) *a#a !e)!aai !a,a&/

Page 12: Validitas Multiplex Real Time Polymerase Chain Reaction

7/21/2019 Validitas Multiplex Real Time Polymerase Chain Reaction

http://slidepdf.com/reader/full/validitas-multiplex-real-time-polymerase-chain-reaction 12/24

me&u&a+a& te+&i+ M RT-PCR i&i le!i,a+u)at2*)"e" am*li.+a"i #a& jua

a&ali"i"&0a te)ja#i !e)"amaa& "e,i&a6a+tu 0a& #i!utu,+a& u&tu+i#e&ti.+a"i DNA !a+te)i a+a& le!i,

"i&+at2 #a& #a*at me&#ete+"i 787!a"il #i #alam !e)!aai "am*el +li&i"

Page 13: Validitas Multiplex Real Time Polymerase Chain Reaction

7/21/2019 Validitas Multiplex Real Time Polymerase Chain Reaction

http://slidepdf.com/reader/full/validitas-multiplex-real-time-polymerase-chain-reaction 13/24

M etode

Se!a&0a+ :; !je+ *e&elitia& 0a& te)#i)i ata"< !l+ *a)a.& lim3a#e&iti" T5 #a& ;; !l+*a)a3i& +elm*+ +&t)l2 #iam!il = > !l+*a)a.& #a)i "etia* ma"i&-m"i& !l+ *a)a.&2

#ila+u+a& e+"t)a+"i DNA #a& *eme)i+"aa&multiplex real time polymerase chain reactionmengguna!an *)ime) e& "i+ue&" "i"i*a&"#$%%& dan gen Mycobacterium protein

tuberculosis MP'$ u&tu+ me&#ete+"i DNA M.tuberculosis dan gen %$# rRN untu!mendete!si Mycobacterium non tuberculosis

Page 14: Validitas Multiplex Real Time Polymerase Chain Reaction

7/21/2019 Validitas Multiplex Real Time Polymerase Chain Reaction

http://slidepdf.com/reader/full/validitas-multiplex-real-time-polymerase-chain-reaction 14/24

asil

Pa#a *e&elitia& te)#a*at "e!a&0a+< +a"u" #i#ia&"i" "e!aailim3a#e&iti" T5 "e1a)a ,i"t*atli2"etela, #ila+u+a& *eme)i+"aa& M RT-PCR #i#a*at+a& ? +a"u" #i"e!a!+a&le, M. tuberculosis dan %& !asus

negati* bu!an #i"e!a!+a& le, M/tuberculosis maupun MNT.

Page 15: Validitas Multiplex Real Time Polymerase Chain Reaction

7/21/2019 Validitas Multiplex Real Time Polymerase Chain Reaction

http://slidepdf.com/reader/full/validitas-multiplex-real-time-polymerase-chain-reaction 15/24

Ha"il &eati3 *al"u M RT-PCR *a#a !l+*a)a.& #a*at #i"e!a!+a& le, !e)!aai3a+t) a&ta)a lai& a#ala,

#i"t)i!u"i Mycobacterium yang tida!me)ata *a#a "am*el ja)i&a&

  &e+)"i" 0a& lua" *a#a ja)i&a&Mycobacterium

  proses +!sasi dan *em!uata& !l+

*a)a.&"e)ta *e)u!a,a& "t)u+tu) DNA

"e6a+tu *)"e" .+"a"i 3)mali&/

Page 16: Validitas Multiplex Real Time Polymerase Chain Reaction

7/21/2019 Validitas Multiplex Real Time Polymerase Chain Reaction

http://slidepdf.com/reader/full/validitas-multiplex-real-time-polymerase-chain-reaction 16/24

F)ame& DNA 0a& #a*at #ia&ali"i"!ia"a&0a mem*u&0ai !* @= !*2 le,

+a)e&a le!i, mu#a, !e)3)ame&ta"i/U+u)a& am*li+& me)u*a+a& 3a+t)0a& mem*u&0ai *e)a& #alam

+e!e),a"ila& am*li.+a"i2 +a)e&a DNA*a#a !l+ *a)a.& "e)i& te)#e)a#a"ile, *)"e#u) .+"a"i #a& embedding

Page 17: Validitas Multiplex Real Time Polymerase Chain Reaction

7/21/2019 Validitas Multiplex Real Time Polymerase Chain Reaction

http://slidepdf.com/reader/full/validitas-multiplex-real-time-polymerase-chain-reaction 17/24

Ne+)"i" *e)+ijua& 0a& lua" #a*atme&0e!a!+a& ,a"il &eati3 +a)e&a

Mycobacterium ,arang tumbuh di !aia&te&a, ja)i&a& &e+)ti+/ Dae)a, &e+)"i"+e+u)a&a& +"ie& 0a& #i*e)lu+a& u&tu+*e)tum!u,a& !a+te)i2 "e,i&a Mycobacterium

itu le!i, "e)i& !e)a#a #i !aia& te*i &e+)"i"0a& ma"i, #itemu+a& "el ma+)3a/

Ha"il &eati3 *al"u ,i"t*atli *a#a M RT-

PCR #a*at #i"e!a!+a& le, jumla, DNA 0a&+u)a& #a)i 2; > "e,i&a ti#a+ #a*atte)#ete+"i le, alat/

Page 18: Validitas Multiplex Real Time Polymerase Chain Reaction

7/21/2019 Validitas Multiplex Real Time Polymerase Chain Reaction

http://slidepdf.com/reader/full/validitas-multiplex-real-time-polymerase-chain-reaction 18/24

Pem !a"asan

Lim3a#e&iti" "e)i& #i"e!a!+a& le,!a+te)i M. tuberculosis maupun MNT.

Lim3a#e&iti" T5 *e)lu #i!e#a+a&#e&a& MNT +a)e&a te)a*i&0a 0a&"a&at !e)!e#a "e,i&a #i*e)lu+a&"uatu *eme)i+"aa& 0a& #a*at

me&e&tu+a& etili *e&0e!a!#e&a& *a"ti/

Page 19: Validitas Multiplex Real Time Polymerase Chain Reaction

7/21/2019 Validitas Multiplex Real Time Polymerase Chain Reaction

http://slidepdf.com/reader/full/validitas-multiplex-real-time-polymerase-chain-reaction 19/24

Multiplex RT-PCR merupa!an salah satualat *eme)i+"aa& 0a& #a*at

me&e&tu+a& etili *a"ti *e&0e!a!lim3a#e&iti"/

I&3e+"i M.tuberculosis merupa!an

 penyebab limadenitis 0a& *ali&"e)i& te)ja#i *a#a a&a+ #a&#e6a"a/Mycobacterium tuberculosismempunyai daya *ate&ita" 0a&

le!i, ti&i #a)i*a#a MNT2"e,i&a#a*at me&im!ul+a& *e&0a+it*a#a*e&#e)ita #e&a& imu&ita" &)mal

Page 20: Validitas Multiplex Real Time Polymerase Chain Reaction

7/21/2019 Validitas Multiplex Real Time Polymerase Chain Reaction

http://slidepdf.com/reader/full/validitas-multiplex-real-time-polymerase-chain-reaction 20/24

Ha"il &eati3 *al"u M RT-PCR #a*at#i"e!a!+a& le, jumla, +uma& 0a& "e#i+it

%*au"i!a"ile)( #alam ja)i&a&/ Fi+"a"i ja)i&a& #e&a& me&u&a+a&

3)mali& #a& #i"im*a& #alam 6a+tu lama#a*at me&0e!a!+a& *e)u!a,a& "t)u+tu)

#a& #e)a#a"i DNA/ Fi+"a"i 0a& "e!ai+&0a #iu&a+a& u&tu+

,a"il *timal a#ala, *e&u&aa& 1ai)a&neutral buer ormalin #i!a&#i&+a&#e&a& 7 non-buer ormalin +a)e&aa+a& mem*e)lam!at *)"e" #e)a#a"i 0a&

#i"e!a!+a& le, 3)mali&/

Page 21: Validitas Multiplex Real Time Polymerase Chain Reaction

7/21/2019 Validitas Multiplex Real Time Polymerase Chain Reaction

http://slidepdf.com/reader/full/validitas-multiplex-real-time-polymerase-chain-reaction 21/24

Pe&u&aa& 7 non-buer ormalin

dapat menyebab!an ti#a+te)am*li.+a"i&0a DNA e& "#$%%& padareal time PCR sehingga a!anmemberi!an hasil &eati3 *al"u/

Wa+tu .+"a"i 0a& !ai+ u&tu+ ja)i&a&0a& a+a& #ila+u+a& *eme)i+"aa& MRT-PCR a#ala, ti#a+ le!i, #a)i ;< jam

u&tu+ me&,i&#a)i .+"a"i !e)le!i,a&0a& #a*at me&0e!a!+a& crosslin!dari mole!ul DNA/

Page 22: Validitas Multiplex Real Time Polymerase Chain Reaction

7/21/2019 Validitas Multiplex Real Time Polymerase Chain Reaction

http://slidepdf.com/reader/full/validitas-multiplex-real-time-polymerase-chain-reaction 22/24

5e!e)a*a 3a+t) 0a& #a*atmeme&a)u,i #e)a#a"i DNA *a#a !l+

*a)a.& te)ma"u+ lama&0a .+"a"i2 *H2+&"e&t)a"i a)am2 #a& "u,u/ O+"i#a"inon-buer 3)mali& mem!e&tu+ a"am

#a& li&+u&a& a"am me&0e!a!+a&#e)a#a"i a"am &u+leat +a)e&a i+ata&B li+"i#i+ *a#a !a"a *u)i&te),i#)li"i" *a#a *H </

Page 23: Validitas Multiplex Real Time Polymerase Chain Reaction

7/21/2019 Validitas Multiplex Real Time Polymerase Chain Reaction

http://slidepdf.com/reader/full/validitas-multiplex-real-time-polymerase-chain-reaction 23/24

Peme)i+"aa& multiplex real time

 polymerase chain reaction dapatdian,ur!an untu! !on+rmasi #ia&"i"lim3a#e&iti" tu!e)+ul"i" *a#a +a"u"te)"a&+a +uat lim3a#e&iti" T5 "e1a)a

+li&i"2teta*i ,a"il ,i"t*atli ti#a+mem*e)li,at+a& lim3a#e&iti" T5/

Page 24: Validitas Multiplex Real Time Polymerase Chain Reaction

7/21/2019 Validitas Multiplex Real Time Polymerase Chain Reaction

http://slidepdf.com/reader/full/validitas-multiplex-real-time-polymerase-chain-reaction 24/24

TERIM AKASI