HPC (Deep Thought) Introduction Flinders University Version 1.0 Page 1 September 2019 Using High Performance Computing The new Flinders High Performance Computing (HPC) solution is called Deep Thought. Comprising high‐end DELL hardware and services, Deep Thought is an enterprise HPC service, using a ‘fair usage’ model to deliver compute resources to researchers and Colleges. The HPC runs 24 hours a day, 7 days a week, excluding scheduled maintenance windows (advertised well in advance). Contents (1) Connecting Your Computer................................................................................................ 2 Microsoft Windows Operating System................................................................................ 2 Connect to Deep Thought (HPC) using Windows ............................................................ 2 Transfer Files to Deep Thought (HPC) using Windows .................................................... 3 macOS or Linux Operating System ...................................................................................... 5 Connect to Deep Thought (HPC) using macOS or Linux................................................... 5 Transfer Files to Deep Thought (HPC) using macOS or Linux........................................... 5 (2) Using Deep Thought .......................................................................................................... 7 Working with Modules and Applications ............................................................................ 7 Overview ......................................................................................................................... 7 Checking what modules are available ............................................................................. 7 Checking what modules are loaded ................................................................................ 7 Loading modules ............................................................................................................. 7 Unloading modules ......................................................................................................... 7 Installing additional modules & applications................................................................... 7 Using Slurm to Run Jobs ...................................................................................................... 8 Migrating from Colossus to Deep Thought.......................................................................... 8 Other Resources ‐ Using Unix/Linux Commands ................................................................. 8 Unix basics....................................................................................................................... 8 Unix command line tips and tricks .................................................................................. 8 Unix tutorial .................................................................................................................... 8 (3) Frequently Asked Questions .............................................................................................. 9
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Using High Performance Computing - Flinders University · Unix command line tips and tricks A more advanced introduction to the Unix command line is available at: Unix Command Line
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HPC (Deep Thought) Introduction Flinders University
Version 1.0 Page 1 September 2019
Using High Performance Computing The new Flinders High Performance Computing (HPC) solution is called Deep Thought.
Comprising high‐end DELL hardware and services, Deep Thought is an enterprise HPC
service, using a ‘fair usage’ model to deliver compute resources to researchers and Colleges.
The HPC runs 24 hours a day, 7 days a week, excluding scheduled maintenance windows
(advertised well in advance).
Contents
(1) Connecting Your Computer................................................................................................ 2
Microsoft Windows Operating System ................................................................................ 2
Connect to Deep Thought (HPC) using Windows ............................................................ 2
Transfer Files to Deep Thought (HPC) using Windows .................................................... 3
macOS or Linux Operating System ...................................................................................... 5
Connect to Deep Thought (HPC) using macOS or Linux ................................................... 5
Transfer Files to Deep Thought (HPC) using macOS or Linux ........................................... 5
(2) Using Deep Thought .......................................................................................................... 7
Working with Modules and Applications ............................................................................ 7