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Unit 5 Organic Synthesis
Organic synthesis refers to the preparation of useful substances from readily available raw materials. Many useful substances contain complex organic molecules and several different reactions may be needed to obtain the product.
Name three different types of product that would involve organic synthesis in its manufacture.
This is based on knowledge of organic reactions and the fact that functional groups usually react in a similar way in more complex molecules. The starting material should be readily available. For example, alcohols can easily be made from alkenes, obtained from crude oil. Alcohols are, therefore, considered as readily available starting materials.
It is usually best to work backwards from the ‘target molecule’ in order to identify the reactions required to obtain the product from a particular starting material.
Example: Identify a sequence of reactions to produce 1,2 dibromobutane from butan-1-ol
Complete the boxes to show how you would synthesis 2-aminopropane from propene in two steps. Work back from the amine. What could you make the amine from? Can this be obtained from propene?
In more complex synthesis there may be several alternative routes.Factors which might affect decisions about the best route include
the number of reaction steps involved the % yield at each stage economic factors such as cost of reagents/reaction conditions aspects of health and safety
% Yield Calculation when a number of steps are involvedThe overall yield is reduced by the % yield involved at each stage. For example: In a three stage reaction involving 90%, 50% and 80% yields, the total yield is
90/100 x 50/100 x 80/100 x 100 = 36 %
Q1. What is the overall yield in the following examples:
Flow charts of Reactions required to solve Problems in Devising a Synthesis
Although you will have your books available to look up reactions from the flow charts on page 483, the reactants and reaction conditions are only provided in the relevant Topics. In order to save time, it is best to learn the flow charts with the extra reaction details included.
The required molecule in step 2 is the main product. Give the name and structural formula of an alternative product_______________________________________________________________________________
Show how the reaction in step 2 occurs and suggest why the main product is formed.
(c) Two steps. Chlorination of a carboxylic acid is included.
Q3. Fill in the boxes to complete the details of the synthesis involving the following reactions. Then answer the related questions.Complete this synthesis so the 1st step product is still an arene.
Describe the type of reaction involved in Step 2. __________________________
A catalyst is involved in Step 1. Name the catalyst and explain briefly the role it plays in the reaction. _______________________________________________________________________________
A simple alternative to this sequence of reactions might be to react the benzene directly with KOH to form cyclohexanol. Explain why this reaction is unlikely to occur.
An alternative way of introducing a halogen atom in this reaction sequence might have been the reaction of bromine with cyclohexane in the presence of UV light.Write an equation for the reaction and describe the type of reaction and attacking particle involved.Eqn. __________________________________________________________________________
Reaction type and attacking particle ____________________ _________________________
Why would this reaction not be the best way to substitute a hydrogen atom with a single bromine atom in the cyclohexane molecule._______________________________________________________________________________
Benzene is no longer used in schools because of an associated health hazard. What is the health hazard?_______________________________________________________________________________Q4. Fill in the boxes to complete the details of the synthesis involving the following reactions. Then answer the related questions.Note: Step 2 involves electrophilic substitution in which the functional group, already present in the benzene ring, is 3,5 directing.
Give the structural formula of one other product that might be formed in Step 2.
The molecule involved in the electrophilic substitution in Step 2 is SO3. Draw its displayed formula, give its bond angles and describe its shape. Show the bond polarity in the molecule and use it to explain which part of the molecule is involved in the electrophilic attack on the benzene ring.
Explain why the molecule itself is non-polar. _________________________________________
An outline of the preparation of nitro benzene is given below.
a. Slowly add conc nitric acid to the cooled sulphuric acidb. Slowly add benzene to the cooled acid mixture. Shake the flask thoroughly.c. Reflux the mixture at 60o C for 50 minutes. Nitrobenzene forms as a layer on top of the
acid mixtured. Pour the contents of the flask into a large excess of water. The nitro benzene sinks to the
bottom.e. Decant off most of the aqueous layer and separate the nitro benzene.f. Wash the nitrobenzene with sodium carbonate and separate the nitrobenzene. Repeat until
there is no further reaction.g. Transfer the nitro benzene to a flask and add anhydrous calcium chloride.h. Filter the nitrobenzene into a flask and distil.
Concentrated nitric acid and concentrated sulphuric acid react as follows:
HNO3 + 2H2SO4 => NO2+ + H3O+ + 2HSO4
-
What important particle is formed at this stage. What part does it play in the reaction?
Note: This preparation should not be carried out in school as benzene is carcinogenic. There is also insufficient detail given in the outline procedure.
Step g _________________________________
How would you know when there was no further reaction in step f
Use the data book to help suggest a range over which you would collect the nitrobenzene when it
is distilled. ___________ oC
The Preparation of phenylamine
Some of the steps involved in the preparation of phenylamine are given below.
a. Heat the tin, concentrated hydrochloric acid and nitro benzene for 20 minutesb. Add sodium hydroxide and water. Steam distil the phenylamine.c. Add sodium chloride solid to the distillate and shake.d. Extract the product in ethoxyethane and allow it to stand in a flask containing a suitable
drying agent.e. Procedure to obtain a sample of phenylamine.
As well as using safety glasses, give two essential safety precautions you would use to carry out steps a-c in this experiment. _______________________________________________________________________________
Draw and label a diagram to show how you would carry out step a.
Give the structural formula of phenylamine in hydrochloric acid. __________________________
Write an equation to show what happens when this particle reacts with sodium hydroxide.
This preparation is unsuitable as a class practical in schools. Nitrobenzene and phenylamine are toxic by inhalation and by skin absorption. Ethoxyethane is very inflammable, volatile and explosive when mixed with air.
Use the data book to help explain how you could obtain a sample of nitrobenzene in step e._______________________________________________________________________________
Combustion Analysis A weighed amount of an organic compound is burnt in oxygen. The amount of carbon dioxide, water vapour and nitrogen formed is found from the increase in mass when they are absorbed in different chemicals. The empirical formula can be determined from the mass of the combustion products, using the following guidelines.
- mass CO2/44 => moles CO2 = moles carbon (x12) => mass carbon
- mass H2O/18 => moles H2O (x 2) =>moles hydrogen = mass hydrogen
- mass nitrogen/14 = moles nitrogen
- mass oxygen = (mass organic compound – (mass C + mass H + mass N)) /16 = moles oxygen
The empirical formula is then obtained from the ratio of moles of each element present.
Divide all the ’moles’ by the lowest number of moles and then multiply by a whole number to get the simplest whole number ratio.
Q5. Combustion analysis showed that 0.173g of an organic compound produced 0.44g of CO2, 0.09g of water and 0.02g of nitrogen when burnt. What is the empirical formula of the organic compound. _______________________________________________________________________________
The empirical formula is also the molecular formula.
One structural isomer is shown below:
What type of organic compound is this isomer? ________________________________________
Name the isomer. ________________________________________________________________
Suggest what pH you would expect, if this compound is shaken with a mixture of water and universal Indicator solution. Explain your reasoning._______________________________________________________________________________
Draw two other structural isomers, with familiar functional groups. Don’t include two isomers, which only vary in the position of a second functional group in the benzene ring.
Suggest a simple chemical test to distinguish between the two isomers. Give a positive result for the test._______________________________________________________________________________
Mass Spectrometry In a mass spectrometer organic compounds are vaporized and subjected to electron bombardment. This removes electrons creating positive ions. The charged organic molecules are unstable and break down into charged fragments, which reflect their structure. The positively charged particles are accelerated through a magnetic field, where they are deflected according to the mass of the positive ion. The ions are brought into detection with increasing magnetic field, creating a spectrum of particles with increasing mass. Their abundance is also recorded and represented on the spectrum
Example: Possible fragmentation of ethanol, C2H5OH
The C2H5+ can also fragment further, for example, by losing two H atoms to form C2H3
+(mass 27)
Features of the spectrum;The peak with greatest mass(molecular ion) represents the molecular mass of the compound.Other fragment peaks give an indication of the structure. For example, loss of CH3 in forming the CH2OH+ peak(mass/charge 31) fits in with the known structure of ethanol.
Which ion is responsible for the peak at 45? __________________________________________
How could it be formed? __________________________________________________________
Sometimes a peak of low abundance occurs to the right of the molecular ion. What is responsible
for this peak? ___________________________________________________________________
Draw the displayed formulae of four structural isomers, which could have this molecular formula.
Which species could be responsible for the peaks at the following mass/charge ratios?
44 _________________ through loss of a _________ group
43 _________________ through loss of a _________ group
Which structure do these fragments seem to match? ____________________________________
Infra Red Infra Red spectra show absorptions of radiations associated with the natural bending and stretching vibrations in organic molecules. Because of the number of different bonds the spectra can be very complex. They provide a unique ‘fingerprint’ of an organic molecule as well as absorptions characteristic of specific bonds. You will need to use the data section 3.3 to identify the bonds associated with absorptions at various wave numbers. You should also know that ‘hydrogen bonded atoms give broad peaks’.
NMR Nuclear magnetic resonance is an extremely powerful analytical technique. Hydrogen nuclei absorb radio waves when subjected to a magnetic field and the exact frequency of absorption depends on the environment of the hydrogen atom. Absorptions by specific hydrogen atoms in
molecules are related to a standard (TMS) and identified by their ‘chemical shift’ from this value. The data book(section 3.4) shows the chemical shift of hydrogen atoms in particular functional groups and also within different arenes. The spectra also show the intensity of absorption so that the relative numbers of hydrogen atoms with a specific environment can be identified.
Example: propanal, CH3CH2CHO
The nmr shows that there are three hydrogen atoms with different environments in the molecule. These match the structure and the proportions of each are in the ratio 3:2:1.
The data book (Section 3.4) shows that for the chemical shift values
1.0 - corresponds to a CH3 group next to other alkyl H atoms
2.5 - corresponds to alkyl H atoms next to a carbonyl group
9.7 - corresponds to an aldehyde H atom
Q7. A colourless organic liquid dissolves freely in water producing an acidic solution. Its empirical formula is CH2O. Its mass spectrum shows a parent ion peak at 60 mass/charge units.
What is its molecular formula? _____________________________________________________
Use the nmr spectrum and information given to help identify the compound. Explain your reasoning_______________________________________________________________________________
Use your data book to identify two peaks, which you would expect to see in the infra red spectrum of this compound._______________________________________________________________________________
Suggest two fragment ions that you would expect to see on the mass spectrum of the compound. State how they would be formed._______________ due to loss of __________________________________________________
_______________ due to loss of __________________________________________________
Q8. A liquid hydrocarbon was analysed and found to contain 90.5% carbon. It burnt with a very smoky flame and reaction with bromine in the presence of an iron catalyst, produced only one mono-substituted structural isomer. Its mass spectrum showed a parent ion peak at 106 mass/charge ratio.
What type of hydrocarbon reacts with bromine in the presence of a iron catalyst? _____________
Suggest four possible structural isomers, which could react with bromine in this way.
1. 2. 3. 4.
Which of these isomers would produce only one possible mono-substituted isomer? __________
Name the hydrocarbon ___________________________________________________________
Give the mass/charge ratio and formula of a fragment ion that would be expected in its mass spectrum.__________ ________________ due to loss of ___________________________________
Use your data book to help you represent a predicted nmr spectrum, on the chart below for this hydrocarbon. The height of the peaks should represent the number of hydrogen atoms involved. Label the number of hydrogen atoms for each peak.
SYNOPTIC STYLE PRACTICE QUESTIONS
As in the actual exam you should get used to using your students and data book to help answer these questions. Your written communication is also important and your ideas should be explained clearly using equations and diagrams as appropriate.The questions may also include work covered in Topics 1-15.
Q1. Aspirin is a widely used painkiller made from 2-hydroxybenzoic acid. Combustion analysis of 0.09 g of aspirin produced 0.198 g carbon dioxide and 0.036 g of water. The structure of aspirin is shown. A simplified mass spectrum and a low resolution nmr are displayed opposite(page 17).
(a) What is the molecula formula of aspirin? _________________
Show that the combustion analysis results and mass spectrum parent ion are consistent with this molecular formula._______________________________________________________________________________
Ethanoic anhydride and phosphoric acid can be used to convert 2-hydroxybenzoic acid into aspirin.Use structural formulae to represent an equation for the reaction.
(d) Identify the most probable fragment ions responsible for the peaks at the following mass/charge ratios. Show on the aspirin molecule where bonds might break to form the fragment ions.
43 _______________________________________
121 _______________________________________
163 _______________________________________
Suggest how the strong peak at 120 might have been formed._______________________________________________________________________________
(e) An nmr spectrum for aspirin(2-ethanolyoxybenzoic acid) is shown below. Use your data book to help label the hydrogen atoms responsible for each peak, or set of peaks.
What would be different about the spectrum, if the molecule was 4-ethanoyloxybenzoic acid?
(a) Giving reagents and conditions devise a 4 step synthesis of amphetamine from benzene.
Draw the structural formula of an alternative product for step 2.
Draw the structural formula of two alternative products, which could be formed in step 3.
Suggest which product from step 2 is most likely to give the best yield in step 3. Justify your answer._______________________________________________________________________________
(b) In a series of experiments 2.3 g of amphetamine was obtained from 5 g of benzene. What was the overall % yield._______________________________________________________________________________
(e) The compound formed from step 3 could be converted into an alcohol and then a ketone. Using structural formulae, show how this could be done, giving reagents and conditions for each reaction.
Using the data book, explain how an IR spectrum would show that a ketone had been formed and that no alcohol was present. _______________________________________________________________________________
How would an nmr spectrum show the difference between the two compounds?_______________________________________________________________________________
Describe a chemical test, which would enable you to confirm the presence of a C=O gp in the ketone._______________________________________________________________________________