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Tree-thinking for Teaching Evolution Evolution 2010: A Workshop for Educators June 21-23
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Tree-thinking for Teaching Evolution · Tree-thinking for Teaching Evolution Evolution 2010: A Workshop for Educators June 21-23

Mar 27, 2020

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Page 1: Tree-thinking for Teaching Evolution · Tree-thinking for Teaching Evolution Evolution 2010: A Workshop for Educators June 21-23

Tree-thinking for Teaching Evolution

Evolution 2010: A Workshop for Educators June 21-23

Page 2: Tree-thinking for Teaching Evolution · Tree-thinking for Teaching Evolution Evolution 2010: A Workshop for Educators June 21-23

Tree Thinking

•  Phylogenetic trees represent hypotheses about historical relationships

By Madprime

Page 3: Tree-thinking for Teaching Evolution · Tree-thinking for Teaching Evolution Evolution 2010: A Workshop for Educators June 21-23

The Origin

From: C. Darwin, 1837

Page 4: Tree-thinking for Teaching Evolution · Tree-thinking for Teaching Evolution Evolution 2010: A Workshop for Educators June 21-23

Common Ancestry

Image: David M. Hillis, Derrick Zwickl, and Robin Gutell, University of Texas

Page 5: Tree-thinking for Teaching Evolution · Tree-thinking for Teaching Evolution Evolution 2010: A Workshop for Educators June 21-23

But other information may be included in a tree…

Brown, David, Rick Brenneman, Klaus-Peter Koepfli, John Pollinger, Borja Mila, Nicholas Georgiadis, Edward Louis, Gregory Grether, David Jacobs, Robert Wayne (2007)

Page 6: Tree-thinking for Teaching Evolution · Tree-thinking for Teaching Evolution Evolution 2010: A Workshop for Educators June 21-23

…and trees differ.

•  Based on what is being analyzed   Species   Genes

•  Based on the analytical method   Parsimony   Nearest Neighbor   Bayesian

Robin A. Weiss

Page 7: Tree-thinking for Teaching Evolution · Tree-thinking for Teaching Evolution Evolution 2010: A Workshop for Educators June 21-23

Map of Relationships

From: T.R.Gregory, EVOO, 2008

Page 8: Tree-thinking for Teaching Evolution · Tree-thinking for Teaching Evolution Evolution 2010: A Workshop for Educators June 21-23

Vocabulary

•  Dendrogram: tree diagram •  Cladogram: a phylogeny that shows

only branching order •  Phylogram: a phylogeny that shows a

measure of divergence

Image: Crion

Page 9: Tree-thinking for Teaching Evolution · Tree-thinking for Teaching Evolution Evolution 2010: A Workshop for Educators June 21-23

Reading Trees

•  Tips   Typically contemporary

species •  Nodes

  Genetic isolation   Rotation around the

nodes

From: T.R.Gregory, EVOO, 2008

Page 10: Tree-thinking for Teaching Evolution · Tree-thinking for Teaching Evolution Evolution 2010: A Workshop for Educators June 21-23

Reading Trees

•  Branches   Acquisition of traits   Divergence

Image: JWSchmidt

Page 11: Tree-thinking for Teaching Evolution · Tree-thinking for Teaching Evolution Evolution 2010: A Workshop for Educators June 21-23

Reading Trees

•  Clades   Common ancestor and all descendants

Image:Stanislav Traykov

Page 12: Tree-thinking for Teaching Evolution · Tree-thinking for Teaching Evolution Evolution 2010: A Workshop for Educators June 21-23

From: Baum, et al Science, 2005

Page 13: Tree-thinking for Teaching Evolution · Tree-thinking for Teaching Evolution Evolution 2010: A Workshop for Educators June 21-23

From: Baum, et al Science, 2005

Page 14: Tree-thinking for Teaching Evolution · Tree-thinking for Teaching Evolution Evolution 2010: A Workshop for Educators June 21-23

From: Baum, et al Science, 2005

Page 15: Tree-thinking for Teaching Evolution · Tree-thinking for Teaching Evolution Evolution 2010: A Workshop for Educators June 21-23

From: Baum, et al Science, 2005

Page 16: Tree-thinking for Teaching Evolution · Tree-thinking for Teaching Evolution Evolution 2010: A Workshop for Educators June 21-23

From: Baum, et al Science, 2005

Page 17: Tree-thinking for Teaching Evolution · Tree-thinking for Teaching Evolution Evolution 2010: A Workshop for Educators June 21-23

From: Baum, et al Science, 2005

Page 18: Tree-thinking for Teaching Evolution · Tree-thinking for Teaching Evolution Evolution 2010: A Workshop for Educators June 21-23

Common Problems with Reading Trees

•  Incorrect mapping of time

•  Straight line = no evolution occurring

Alexei Kouprianov

Page 19: Tree-thinking for Teaching Evolution · Tree-thinking for Teaching Evolution Evolution 2010: A Workshop for Educators June 21-23

Common Problems with Reading Trees

•  Reading along the tips

•  Node counting

P. Huey/Science

Page 20: Tree-thinking for Teaching Evolution · Tree-thinking for Teaching Evolution Evolution 2010: A Workshop for Educators June 21-23

Similar vs. related

Images: Chris Muenzer, Sjonge, Fred Hsu

Page 21: Tree-thinking for Teaching Evolution · Tree-thinking for Teaching Evolution Evolution 2010: A Workshop for Educators June 21-23

Ancestor vs. Sibling

Images: Thomas Lersc, Paris75000

Page 22: Tree-thinking for Teaching Evolution · Tree-thinking for Teaching Evolution Evolution 2010: A Workshop for Educators June 21-23

“Higher” or “Lower”

Images: Dbenbenn, Thomas Stromberg, Simon Andrews

Page 23: Tree-thinking for Teaching Evolution · Tree-thinking for Teaching Evolution Evolution 2010: A Workshop for Educators June 21-23

Lineage Age

•  Extant species have been evolving for the same amount of time

Fred Hsu

Page 24: Tree-thinking for Teaching Evolution · Tree-thinking for Teaching Evolution Evolution 2010: A Workshop for Educators June 21-23

Helpful Approaches

•  U-trees •  Trees pointing

sideways By Elke Freese

Alexei Kouprianov

Page 25: Tree-thinking for Teaching Evolution · Tree-thinking for Teaching Evolution Evolution 2010: A Workshop for Educators June 21-23

Helpful Approaches

•  Top-down grouping (by clade) •  Avoid misleading terminology, try “derived” and “ancestral”

From: Baum, et al Science 2005

Page 26: Tree-thinking for Teaching Evolution · Tree-thinking for Teaching Evolution Evolution 2010: A Workshop for Educators June 21-23

Tree thinking

•  A visual hypothesis about historical relationships

•  A representation of common ancestry

•  A way of representing evolutionary thinking