The Rocky Road To Reuse - nfais.memberclicks.net · The Rocky Road To Reuse: ... •ICSU/WDS/RDA Publishing Data Service Working group ... -Starting BoF Data Search The National DATA

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Anita de Waard

VP Research Data Collaborations

Elsevier RDMS

[email protected]

NFAIS Annual Conference, Philadelphia, PA

February 21, 2016

The Rocky Road To Reuse: Encouraging infrastructures to promote data integration and reuse

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Source: JISC: How and why you should manage your research data: a guide for researchers

Caroline Ingram, Published: 7 January 2016

Research Data Life Cycle

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Collect and Capture: Sharing Protocols

www.hivebench.com

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Save and store: Data Rescue Award

https://www.elsevier.com/physical-sciences/earth-and-planetary-sciences/the-2015-international-data-rescue-award-in-the-geosciences

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http://www.journals.elsevier.com/softwarex/

Collaborate & Analyse: SoftwareX

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The first Reproducibility Paper was published recently:

http://www.sciencedirect.com/science/article/pii/S0306437915301113

and is linked to this paper:

http://www.sciencedirect.com/science/article/pii/S0306437915000472

The data is hosted here: https://data.mendeley.com/datasets/xz6gv65m6d/6

To reproduce the experiment, the journal requires source code for the software components,

together with installation scripts, and we suggest authors to host their code in GitHub (See

software publication project) , In addition to the source code, we recommend authors to

submit a virtual machine, where all appropriate software components are readily installed and

can be reproduced on a wide variety of platforms. Authors are to submit their experiments

using either ReproZip or Docker.

Publish Reproducible Formats

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https://data.mendeley.com/datasets/xz6gv65m6d/6

Linked to published

papers – or not

Linked to Github – or

not

Versioning and

provenance

Manage, Store: Mendeley Data

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Share and Publish, Today:

• Supplementary data at PANGAEA

• Bidirectional links between PANGAEA &

ScienceDirect

• Data visualized next to the article

http://www.elsevier.com/databaselinking

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Share and Publish, Tomorrow:

• ICSU/WDS/RDA Publishing Data Service Working group

• Currently creating linked-data model for exposing DOI to

DOI links outside publisher’s firewall

• Merged with National Data Service pilot with the same goal

• Collaboration between CrossRef, DataCite, Europe PubMed

Central, ANDS, Thompson Reuters, Elsevier

• About to deliver: http://dliservice.research-infrastructures.eu/#/api

Objective: move from

.. a one-for-all cross-

referencing service for

articles and data

a plethora of (mostly) bilateral

arrangements between the

different players… to…

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Researche

rs

Funding

AgencyInstitution

Data

RepositoryDataset

JournalPaper

1. Researcher creates datasets

2. Researcher writes paper & publishes in journal

3. (Sometimes,) dataset gets posted to repository

4. Researcher reports (post-hoc) to Institution and Funder

22

1

3

4

4

Share and Publish, Current Status:

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Researche

rs

Funding

AgencyInstitution

Dataset

JournalPaper2

2

1

3

4

4iii. No link between data

and paper

iv. Funders/Institutions informed as an

afterthought

i. Too much work for researchers

ii. Data posting not mandatory

Data

Repository

Share and Publish, Issues:

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Researche

rs

Funding

AgencyInstitution

Data

Repository

Dataset

Journal

Paper

1. Researcher creates datasets and posts to

repository(under embargo)

2. Funder is automatically notified of dataset publication

3. Researcher writes paper & publishes in journal;

embargo is lifted and data linked

- NB this also allows release of non-used data for negative result and

reproducibility

4. Funder and institution get report on publication and embargo lifting

2

1

1

3

33

4

4i. Less

Work!

iv. Better

Tracking!

iii. Better

Linking!

ii. More

Data

Stored!

Share and Publish, Proposal:

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Cite:

https://www.elsevier.com/connect/data-citation-is-becoming-real-with-force11-and-elsevier

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Discover:

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Federated

Poor API

Rich API

FTP & Index

Federated

Poor API

Rich API

FTP & Index

Federated

Poor API

Rich API

FTP & Index

Data

EnrichmentManual

Automated

(User) Intent

Ranking

Filtering (how to

mix federated &

indexed rich &

poor)

Search

RenderingSearch all data

Faceted query/Results

refinement

Store & Use results

General

UIDomain

UI

Filtering

Feeding user signals

back into Search ranking

Evaluation

Birds of a Feather on Data Search: https://rd-alliance.org/bof-data-search.html

DESIRE: Networks of Discovery

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Source: JISC: How and why you should manage your research data: a guide for researchers

Caroline Ingram, Published: 7 January 2016

Research Data Life Cycle

Electronic Lab Notebooks

Software Publication

Data repositories

DataSearch

Data Linking and Publishing

Data Citation

Electronic Lab Notebooks

Software Publication

Data repositories

DataSearch

Data Linking and Publishing

Data Citation

Electronic Lab Notebooks

Software Publication

Data repositories

DataSearch

Data Linking and Publishing

Data Citation

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https://www.elsevier.com/connect/10-aspects-of-highly-effective-research-data

A Maslow Hierarchy for Research Data:

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Networks of Collaboration:

Force11:

- Multi-stakeholder, member-driven organisation

- Unites scholars, tool developers, librarians, publishers, funding agencies etc. etc.

- E.g. Software citation group, akin to Data Citation Group

- Will present at Force16 in Portland, OR April 17-19, 2016

National Data Service:

- Multi-stakeholder group, based around supercomputing centres

- Aims to be a ‘connective tissue’ between data creation, curation, storage etc projects.

- Inviting Pilots: two or more partners who have not worked together, interested in

collaborating on a data-centric project to solve a real-world needs: can include software

sharing

- E.g. Datasearch, Data Linking systems

RDA:

- Coleading Data publishing, linking group

- Colead Cost Recovery group

- Active in Chemistry, Earth Science groups

- Starting BoF Data Search

The National

DATA SERVICE

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• https://www.hivebench.com

• https://www.elsevier.com/physical-sciences/earth-and-planetary-sciences/the-2015-international-data-rescue-award-in-the-geosciences

• http://www.journals.elsevier.com/softwarex/

• https://www.elsevier.com/books-and-journals/content-innovation/data-base-linking

• https://rd-alliance.org/groups/rdawds-publishing-data-services-wg.html

• https://rd-alliance.org/bof-data-search.html

• https://data.mendeley.com/

• https://www.elsevier.com/connect/10-aspects-of-highly-effective-research-data

• https://www.force11.org/

• http://www.nationaldataservice.org/

• https://rd-alliance.org/

• https://www.elsevier.com/about/open-science/research-data

Anita de Waard, [email protected]

Thank you! Questions?