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The preparatory phase uses 2 ATP and converts 1 glucose to 2 molecules of GAP isomerization Glucose + 2ATP 2GAP + 2ADP + 2H +
17

The preparatory phase uses 2 ATP and converts 1 glucose to

Feb 22, 2022

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Page 1: The preparatory phase uses 2 ATP and converts 1 glucose to

The preparatory phase

uses 2 ATP and

converts 1 glucose to

2 molecules of GAP

isomerization

Glucose + 2ATP � 2GAP + 2ADP + 2H+

Page 2: The preparatory phase uses 2 ATP and converts 1 glucose to

+ H+

Step 1: Hexokinase catalyzes a phosphoryl

transfer from ATP to glucose

Keeps [glucose] low in the cell,

so glucose can always move

down its gradient into the cell

1 ATP used

‘Activates’ glucose

Page 3: The preparatory phase uses 2 ATP and converts 1 glucose to

Mg2+ offsets negative charge on phosphates

of ATP, allowing nucleophilic attack

Page 4: The preparatory phase uses 2 ATP and converts 1 glucose to

Hexokinase undergoes a conformational

change on binding glucose (induced fit)

chomp!

Page 5: The preparatory phase uses 2 ATP and converts 1 glucose to

phosphoglucose

isomerase

Step 2: PGI catalyzes the isomerization of

the aldose G6P to the ketose F6P

Moving the carbonyl to C2 prepares

the molecule for cleavage in step 4

Page 6: The preparatory phase uses 2 ATP and converts 1 glucose to

General acid-base catalysis promotes

isomerization via an enediol intermediate

(general acid

catalysis –

protonation

of ring O)

Glucose

6-phosphate

phosphoglucose

isomerase

Page 7: The preparatory phase uses 2 ATP and converts 1 glucose to

Step 3: PFK catalyzes the second

phosphoryl transfer from ATP

+ H+

1 ATP used

• This step ‘commits’ the hexose

to being broken down

• Phosphorylations become even:

at both ends of the molecule

Further ‘activates’ the sugar

Page 8: The preparatory phase uses 2 ATP and converts 1 glucose to

Step 4: Aldolase catalyzes the aldol

cleavage of the hexose into 2 trioses

aldolase

Page 9: The preparatory phase uses 2 ATP and converts 1 glucose to

NHNHNHNH----(Lys)(Lys)(Lys)(Lys)++++

general

base

catalysis

NHNHNHNH----(Lys)(Lys)(Lys)(Lys)++++

NHNHNHNH----(Lys)(Lys)(Lys)(Lys)NHNHNHNH----(Lys)(Lys)(Lys)(Lys)++++

∙∙∙∙∙∙∙∙(general acid

catalysis)

Enamine

Schiff base (imine)

(Non-enzymatic) base-catalyzed aldol cleavage

forms an unstable enolate intermediate

Eeek! I have too

much charge!

Aldolase promotes the reaction

by forming a Schiff base instead:

Aaahh* no charge

Page 10: The preparatory phase uses 2 ATP and converts 1 glucose to

Schiff base formation on aldolase involves

covalent and general acid-base catalysis

Page 11: The preparatory phase uses 2 ATP and converts 1 glucose to

General acid-base catalysis

and electron-poor Schiff base

promote cleavage

Page 12: The preparatory phase uses 2 ATP and converts 1 glucose to

Aldolase releases 2nd product by reversing

Schiff-base formation reactions

Page 13: The preparatory phase uses 2 ATP and converts 1 glucose to

2 trioses result from aldolase cleavage

because hexose carbonyl is at C2

aldolase

Page 14: The preparatory phase uses 2 ATP and converts 1 glucose to

Triose phosphate isomerase interconverts

the products of the aldolase reaction

Two of the same molecule can

continue through glycolysis:

more efficient than two different

Mechanism?

Page 15: The preparatory phase uses 2 ATP and converts 1 glucose to

Aldose-ketose isomerization occurs through

an enediol intermediate

Page 16: The preparatory phase uses 2 ATP and converts 1 glucose to

Triose phosphate isomerase (TIM) has a

‘TIM barrel’ fold, as do many other enzymes

Convergent

or divergent

evolution?

Including

aldolase,

enolase,

pyruvate

kinase

Page 17: The preparatory phase uses 2 ATP and converts 1 glucose to

The preparatory phase

uses 2 ATP and

converts 1 glucose to

2 molecules of GAP

isomerization

Glucose + 2ATP � 2GAP + 2ADP + 2H+

GAP