The lab that was born on the web

• 1. http://slideshare.net/cameronneylon

2. Who is this guy anyway? 3. mic ade AcWho is this guy anyway? 4. mic ade Ac ogistBiol Who is this guy anyway? 5. mic ade Ac ogistBiol Who is this guy anyway? Che mist 6. mic ade Ac ogistBiol Who is this guy anyway? Chemis ttist enSci 7. mic No adet an Aceng ine ogist erolBi Who is this guy anyway? Chemis ttist enSci 8. micNo ade t an Ac eng Been ineinvolvogist ered olin an Bi ELN developmen t Who is this guy anyway?Che mist tisten Sci 9. micNo ade t an Ac eng Been ineinvolvogist ered olin an Bi ELN developmen t Who is this guy anyway?Che mistderco tist taenNo Sci 10. micNo ade t an Ac eng Been ineinvolvogist ered olin an Bi ELN developmen tWho is this guy anyway?Che mist pen ta/O ate Da oc derpen e adv coO tist taiencenNo ScSci 11. mic No adet an Aceng Beenineinvolv ogist eredolin an Bi ELN developmen tWho is this guy anyway? ChePra mis gmt atis pen t ta/O ate Da ocderpen e advcoOtist taienc enNo Sc Sci 12. Please suspend disbelief...- security - IP - regulatory issues...I will come back to them http://www.ickr.com/photos/nihilenz/2545518545 13. In the last ve years...? http://ickr.com/photos/stewart/461099066/ 14. ...in the past 24 hours? 15. http://www.ickr.com/photos/nbachiyski/2186228572/ 16. ...is to the fully integratedlaboratory record... 17. as... 18. is to... 19. The Lab that was Born on the Web Cameron Neylon 20. The premise.... Most of what is needed to build a fully integrated laboratory recording system can befound, for free, in existing web services... (it does lack a little polish admittedly) It just needs to be wired up (thats a big just) 21. Lab book as a journal... http://www.ickr.com/photos/nbachiyski/2186228572/ 22. Blog as journal... 23. Description, date categorisation, objects, identity, accessibility......not of much interest to most people 24. http://biolab.isis.rl.ac.uk/projects/blog/ 25. Automatic Blogging by Machines 26. Integration and communication 27. http://biolab.isis.rl.ac.uk/projects/blog/ 28. ProcedureExperimentMaterial SampleData DataDataAnalysis Analysis 29. ProcedureExperimentMaterial SampleMaterial Sample Material Sample Data DataData DataData Analysis Analysis 30. Schema?Stuff gets combined with other stuff andstuff is done to it to make more stuff.(Meaning can be layered on lateraccording to specic needs) 31. Data Data DataDataDataDataAnalysisProcedureProcedureAnalysis Procedure ProcedureSampleMaterialSample SampleMaterialSample Sample Material MaterialSample Sample Time 32. Data Data DataDataDataDataAnalysisProcedureProcedureAnalysis Procedure ProcedureSampleMaterialSample SampleMaterialSample Sample Material MaterialSample Sample Time 33. Data services ...get someone else to do the heavy lifting... 34. Good data services will... Provide a URL endpoint for any item Will understand your data type enough... ...to provide simple embed codes and more sophisticated re-packaging where required Handle versioning, identity, date stamps, provenance, security, etc... 35. Data Data DataDataDataDataAnalysisProcedureProcedureAnalysis Procedure ProcedureSampleMaterialSample SampleMaterialSample Sample Material MaterialSample Sample Time 36. Data DataSamples can be offloaded... DataDataDataDataAnalysis ProcedureProcedureAnalysisLIMS, Database, Blog, Wiki, Spreadsheet...Procedure ProcedureSampleMaterialSample SampleMaterialSample Sample Material MaterialSample Sample Time 37. Data Data Procedures are just documents... DataDataDataDataAnalysisProcedureProcedureAnalysis Procedure ProcedureSampleMaterialSample SampleMaterialSample Sample Material MaterialSample Sample Time 38. Measuring solubility 39. http://onschallenge.wikispaces.com/Exp026 40. http://tinyurl.com/ons-challenge-spreadsheet 41. http://oru.edu/cccda/sl/descriptorspace/ds.php 42. http://oru.edu/cccda/sl/descriptorspace/ds.php 43. http://slurl.com/secondlife/Drexel/165/178/24 44. If we push it all out to other services... 45. ...what are we left with? 46. Time 47. The feed of links between resourcesTime 48. How do you capture this? 49. LaneSample uL1[[DNA:%]] [[box]]2[[DNA:%]] [[box]]3[[DNA:%]] [[box]][[Section>Procedure]] [[Procedure_Type>electrophoresis_agarose]] [[Sandpit_group>ahm2007]] 50. LaneSample uL1[[DNA:%]] [[box]]2[[DNA:%]] [[box]]3[[DNA:%]] [[box]][[Section>Procedure]] [[Procedure_Type>electrophoresis_agarose]] [[Sandpit_group>ahm2007]] 51. LaneSample uL1[[DNA:%]] [[box]]2[[DNA:%]] [[box]]3[[DNA:%]] [[box]][[Section>Procedure]] [[Procedure_Type>electrophoresis_agarose]] [[Sandpit_group>ahm2007]] 52. A framework. Not a system. 53. Standardize the connections 54. Not the end points 55. The architecture is already in place The standards already exist There is a massive infrastructure in place Use whatever tools you(r users) want.......just provide an accessible endpoint 56. If my business model was based on control Id be getting real worried right about nowJohn Wilbanks,Vice President, Science Commons 57. ...delivery of information to the right place, at the right time... 58. The future will be about leveraging other peoples data 59. Less integration. More linking. 60. Jeremy Frey Jenny Hale Andrew Milsted Southampton development team Simon Coles Steve Wilson Mark Borkum Dave de RoureJean-Claude Bradley Rajarshi Guha Open Notebook Science Andy Lang Solubility Challenge Antony Williams Egon Willighagen Pierre Lindenbaum