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The dids, dos, don’ts and developments of data-limited catch limits Dr. Jim Berkson NMFS SEFSC And Dr. Jason Cope NMFS NWFSC SEFSC QUEST Quantitative Ecology and Socioeconomics Training Program
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The dids, dos, don’ts and developments of data-limited catch ......The dids, dos, don’ts and developments of data-limited catch limits Dr. Jim Berkson NMFS SEFSC And Dr. Jason

Jul 15, 2020

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Page 1: The dids, dos, don’ts and developments of data-limited catch ......The dids, dos, don’ts and developments of data-limited catch limits Dr. Jim Berkson NMFS SEFSC And Dr. Jason

The dids, dos, don’ts and developments of

data-limited catch limits

Dr. Jim Berkson

NMFS SEFSC

And

Dr. Jason Cope

NMFS NWFSC

SEFSC

QUEST

Quantitative Ecology and Socioeconomics

Training Program

Page 2: The dids, dos, don’ts and developments of data-limited catch ......The dids, dos, don’ts and developments of data-limited catch limits Dr. Jim Berkson NMFS SEFSC And Dr. Jason

Outline

• Background

• Definitions: What is data-limited?

• Innovations of data-limited methods

• Post-innovation stages

• Summarize the dids, dos, don’ts and

developments

U.S. Department of Commerce | National Oceanic and Atmospheric Administration | NOAA Fisheries | Page 2

Page 3: The dids, dos, don’ts and developments of data-limited catch ......The dids, dos, don’ts and developments of data-limited catch limits Dr. Jim Berkson NMFS SEFSC And Dr. Jason

Background

U.S. Department of Commerce | National Oceanic and Atmospheric Administration | NOAA Fisheries | Page 3

Page 4: The dids, dos, don’ts and developments of data-limited catch ......The dids, dos, don’ts and developments of data-limited catch limits Dr. Jim Berkson NMFS SEFSC And Dr. Jason

Applied stock assessment

U.S. Department of Commerce | National Oceanic and Atmospheric Administration | NOAA Fisheries | Page 4

Stock Assessment

model

Parameters

Data Derived

outputs

Management

Page 5: The dids, dos, don’ts and developments of data-limited catch ......The dids, dos, don’ts and developments of data-limited catch limits Dr. Jim Berkson NMFS SEFSC And Dr. Jason

Assessing fisheries stocks through time

U.S. Department of Commerce | National Oceanic and Atmospheric Administration | NOAA Fisheries | Page 5

Time/Complexity 1890s-ish present-ish

Page 6: The dids, dos, don’ts and developments of data-limited catch ......The dids, dos, don’ts and developments of data-limited catch limits Dr. Jim Berkson NMFS SEFSC And Dr. Jason

Assessing stocks through time

U.S. Department of Commerce | National Oceanic and Atmospheric Administration | NOAA Fisheries | Page 6

Data

hammer

U.S. National Assessment Levels

(SAIP 2001)

Space/Seasons/Ecosystem included

Index only

Simple life history equilibrium models

Aggregated production models

Size/age/stage-structured models

????

Page 7: The dids, dos, don’ts and developments of data-limited catch ......The dids, dos, don’ts and developments of data-limited catch limits Dr. Jim Berkson NMFS SEFSC And Dr. Jason

Assessing stocks through time

U.S. Department of Commerce | National Oceanic and Atmospheric Administration | NOAA Fisheries | Page 7

Data

hammer

U.S. National Assessment Levels

(SAIP 2001)

Space/Seasons/Ecosystem included

Index only

Simple life history equilibrium models

Aggregated production models

Size/age/stage-structured models

Are these stocks “sick ducks”?

Page 8: The dids, dos, don’ts and developments of data-limited catch ......The dids, dos, don’ts and developments of data-limited catch limits Dr. Jim Berkson NMFS SEFSC And Dr. Jason

2007: Magnuson-Stevens Reauthorization

U.S. Department of Commerce | National Oceanic and Atmospheric Administration | NOAA Fisheries | Page 8

Overfishing Limit

Maximum amount that

can be caught in a

year without resulting in overfishing.

Page 9: The dids, dos, don’ts and developments of data-limited catch ......The dids, dos, don’ts and developments of data-limited catch limits Dr. Jim Berkson NMFS SEFSC And Dr. Jason

2007: Magnuson-Stevens Reauthorization

U.S. Department of Commerce | National Oceanic and Atmospheric Administration | NOAA Fisheries | Page 9

Overfishing Limit

Acceptable Biological

Catch

Maximum amount that

can be caught in a

year without resulting

in overfishing.

Incorporates scientific

uncertainty.

Determined by scientists on regional

technical committees.

Page 10: The dids, dos, don’ts and developments of data-limited catch ......The dids, dos, don’ts and developments of data-limited catch limits Dr. Jim Berkson NMFS SEFSC And Dr. Jason

2007: Magnuson-Stevens Reauthorization

U.S. Department of Commerce | National Oceanic and Atmospheric Administration | NOAA Fisheries | Page 10

Overfishing Limit

Acceptable Biological

Catch

Annual Catch Limit

Maximum amount that

can be caught in a year

without resulting in

overfishing.

Incorporates scientific

uncertainty. Determined

by scientists on regional

technical committees.

The amount that can be

caught in a given year,

set by policymakers.

Can’t exceed the ABC.

Page 11: The dids, dos, don’ts and developments of data-limited catch ......The dids, dos, don’ts and developments of data-limited catch limits Dr. Jim Berkson NMFS SEFSC And Dr. Jason

2007: Magnuson-Stevens Reauthorization

All stocks needed annual catch limits

(ACLs)

• Few exceptions

• ACLs required for stocks subject to

overfishing by 2010.

• For stocks “in the fishery” by 2011.

U.S. Department of Commerce | National Oceanic and Atmospheric Administration | NOAA Fisheries | Page 11

Page 12: The dids, dos, don’ts and developments of data-limited catch ......The dids, dos, don’ts and developments of data-limited catch limits Dr. Jim Berkson NMFS SEFSC And Dr. Jason

U.S. Department of Commerce | National Oceanic and Atmospheric Administration | NOAA Fisheries | Page 12

Stock assessments through time

Year

# o

f ass

ess

ments

Data-limited

dominated

Mix of data-

limited & -rich

Data-rich

dominated

Example: PFMC Groundfish FMP

Data-rich

Data-limited

Page 13: The dids, dos, don’ts and developments of data-limited catch ......The dids, dos, don’ts and developments of data-limited catch limits Dr. Jim Berkson NMFS SEFSC And Dr. Jason

U.S. Department of Commerce | National Oceanic and Atmospheric Administration | NOAA Fisheries | Page 13

Stock assessments through time

Year

# o

f ass

ess

ments

Data-limited

dominated

Mix of data-

limited & -rich

Data-rich

dominated DL-

DR

Mix

Example: PFMC Groundfish FMP

Data-rich

Data-limited

Page 14: The dids, dos, don’ts and developments of data-limited catch ......The dids, dos, don’ts and developments of data-limited catch limits Dr. Jim Berkson NMFS SEFSC And Dr. Jason

Why weren’t these stocks previously

assessed?

• Not valuable in a socioeconomic, human-centric way.

• No data or little data Not target of fisheries or surveys Not enough catch

• Not enough resources Stock assessment scientists Not enough time and money

• Ecological value slowly being incorporated

U.S. Department of Commerce | National Oceanic and Atmospheric Administration | NOAA Fisheries | Page 14

Page 15: The dids, dos, don’ts and developments of data-limited catch ......The dids, dos, don’ts and developments of data-limited catch limits Dr. Jim Berkson NMFS SEFSC And Dr. Jason

Definitions: What is “data-limited”?

U.S. Department of Commerce | National Oceanic and Atmospheric Administration | NOAA Fisheries | Page 15

Page 16: The dids, dos, don’ts and developments of data-limited catch ......The dids, dos, don’ts and developments of data-limited catch limits Dr. Jim Berkson NMFS SEFSC And Dr. Jason

Defining assessment approaches

Data-rich methods • Age/size structured

• Catch, biological compositions.

Indices, etc.

U.S. Department of Commerce | National Oceanic and Atmospheric Administration | NOAA Fisheries | Page 16

Data

hammer

Data-moderate methods • Catch; Index or limited

biological compositions

Data-poor methods • Catch only; length comps;

no catch; no length comps

Page 17: The dids, dos, don’ts and developments of data-limited catch ......The dids, dos, don’ts and developments of data-limited catch limits Dr. Jim Berkson NMFS SEFSC And Dr. Jason

Defining assessment approaches

Data-rich methods • Age/size structured

• Catch, biological compositions.

Indices, etc.

U.S. Department of Commerce | National Oceanic and Atmospheric Administration | NOAA Fisheries | Page 17

Data

hammer

Data-moderate methods • Catch; Index or limited

biological compositions

Data-poor methods • Catch only; length comps;

no catch; no length comps

One person’s trash is another person’s less smelly trash

Page 18: The dids, dos, don’ts and developments of data-limited catch ......The dids, dos, don’ts and developments of data-limited catch limits Dr. Jim Berkson NMFS SEFSC And Dr. Jason

U.S. Department of Commerce | National Oceanic and Atmospheric Administration | NOAA Fisheries | Page 18

Page 19: The dids, dos, don’ts and developments of data-limited catch ......The dids, dos, don’ts and developments of data-limited catch limits Dr. Jim Berkson NMFS SEFSC And Dr. Jason

Defining assessment approaches

Data-rich methods • Age/size structured

• Catch, biological compositions.

Indices, etc.

U.S. Department of Commerce | National Oceanic and Atmospheric Administration | NOAA Fisheries | Page 19

Data

hammer

Data-moderate methods • Catch; Index and/or limited

biological compositions

Data-poor methods • Catch only; length comps;

no catch; no length comps

Data-

limited

methods

Page 20: The dids, dos, don’ts and developments of data-limited catch ......The dids, dos, don’ts and developments of data-limited catch limits Dr. Jim Berkson NMFS SEFSC And Dr. Jason

More Definitions: Stock complex

U.S. Department of Commerce | National Oceanic and Atmospheric Administration | NOAA Fisheries | Page 20

• A species grouping for management purposes

• May or may not be based on ecological or

fisheries interactions

• Managed as a conglomerate “stock”

• Stock complex catch levels calculated

• Over all stocks combined

• Additive over individual stocks

Image: David Malan

Page 21: The dids, dos, don’ts and developments of data-limited catch ......The dids, dos, don’ts and developments of data-limited catch limits Dr. Jim Berkson NMFS SEFSC And Dr. Jason

Nationally: 504 catch limits

U.S. Department of Commerce | National Oceanic and Atmospheric Administration | NOAA Fisheries | Page 21

Method Number of catch

limits based on

method

Percentage of

catch limits based

on method

Data-rich 150 30%

Data-moderate 59 11%

Data-poor 295 59%

from Newman, Berkson, and Suatoni. 2014. Fisheries Research. In Press.

Page 22: The dids, dos, don’ts and developments of data-limited catch ......The dids, dos, don’ts and developments of data-limited catch limits Dr. Jim Berkson NMFS SEFSC And Dr. Jason

Method distribution varies greatly by region

U.S. Department of Commerce | National Oceanic and Atmospheric Administration | NOAA Fisheries | Page 22

NE

FM

C

MA

FM

C

SA

FM

C

GM

FM

C

CF

MC

HM

S

PF

MC

NP

FM

C

WP

FM

C

Data-

Rich 28 8 14 9 0 3 46 38 4

Data-

Mod 1 1 0 0 0 0 8 48 1

Data-

poor 2 1 47 25 23 37 106 13 41

from Newman, Berkson, and Suatoni. 2014. Fisheries Research. In Press.

Page 23: The dids, dos, don’ts and developments of data-limited catch ......The dids, dos, don’ts and developments of data-limited catch limits Dr. Jim Berkson NMFS SEFSC And Dr. Jason

Innovations of data-limited methods

U.S. Department of Commerce | National Oceanic and Atmospheric Administration | NOAA Fisheries | Page 23

Page 24: The dids, dos, don’ts and developments of data-limited catch ......The dids, dos, don’ts and developments of data-limited catch limits Dr. Jim Berkson NMFS SEFSC And Dr. Jason

U.S. Department of Commerce | National Oceanic and Atmospheric Administration | NOAA Fisheries | Page 24

Started with:

Data-poor control rule

• Restrepo et al. (1998)

Windfall ratios • Alverson and Pereyra (1969)

• Gulland (1970)

Stock reduction analysis • Kimura and Tagart (1982)

• Walters et al. (2006)

Page 25: The dids, dos, don’ts and developments of data-limited catch ......The dids, dos, don’ts and developments of data-limited catch limits Dr. Jim Berkson NMFS SEFSC And Dr. Jason

U.S. Department of Commerce | National Oceanic and Atmospheric Administration | NOAA Fisheries | Page 25

Started with:

Data-poor control rule

• Restrepo et al. (1998)

Windfall ratios • Alverson and Pereyra (1969)

• Gulland (1970)

Stock reduction analysis • Kimura and Tagart (1982)

• Walters et al. (2006)

Turned into:

Scalar approaches • Berkson et al. (2011)

DCAC • MacCall (2009)

DB-SRA • Dick and MacCall (2011)

Page 26: The dids, dos, don’ts and developments of data-limited catch ......The dids, dos, don’ts and developments of data-limited catch limits Dr. Jim Berkson NMFS SEFSC And Dr. Jason

The gist

U.S. Department of Commerce | National Oceanic and Atmospheric Administration | NOAA Fisheries | Page 26

from Berkson and Thorson. 2014. ICES Journal of Marine Science

Page 27: The dids, dos, don’ts and developments of data-limited catch ......The dids, dos, don’ts and developments of data-limited catch limits Dr. Jim Berkson NMFS SEFSC And Dr. Jason

DynF

Catch-

MSY

Innovation of data-limited approaches

DCAC

DB-SRA

SSS

ORCS

stSRA FLEP

LBRPs

LH Invars.

MPA-DT

MPA-DR

SPRMER

Catch

free

SPR_DT

AIM

LHA_BK

SPR-LB

Robin

Hood

PSA

CC-SRA YPR

Fdem

Page 28: The dids, dos, don’ts and developments of data-limited catch ......The dids, dos, don’ts and developments of data-limited catch limits Dr. Jim Berkson NMFS SEFSC And Dr. Jason

Grouping data-limited approaches

• Input/Data types

• Static vs dynamic

• Baseline vs non-

baseline

• F vs catch

(management units)

Organizing may help the how and why methods are

used (see “Implementation”)

Page 29: The dids, dos, don’ts and developments of data-limited catch ......The dids, dos, don’ts and developments of data-limited catch limits Dr. Jim Berkson NMFS SEFSC And Dr. Jason

Post-innovation stages

U.S. Department of Commerce | National Oceanic and Atmospheric Administration | NOAA Fisheries | Page 29

Page 30: The dids, dos, don’ts and developments of data-limited catch ......The dids, dos, don’ts and developments of data-limited catch limits Dr. Jim Berkson NMFS SEFSC And Dr. Jason

During/after innovation, there is:

• Improvement • Input parameters

• Harvest control rules (including uncertainty estimation)

• Evaluation • Simulation testing

• Management Strategy Evaluation

• Implementation • Toolboxes

• Application planning

• Standardization

U.S. Department of Commerce | National Oceanic and Atmospheric Administration | NOAA Fisheries | Page 30

Page 31: The dids, dos, don’ts and developments of data-limited catch ......The dids, dos, don’ts and developments of data-limited catch limits Dr. Jim Berkson NMFS SEFSC And Dr. Jason

Improvements: inputs parameters

Cope et al. in press

U.S. Department of Commerce | National Oceanic and Atmospheric Administration | NOAA Fisheries | Page 31

M

0.0 0.2 0.4 0.6 0.8 1.0

0.0

0.5

1.0

1.5

Hamel in press

FMSY/M

Zhou et al. 2012 Thorson et al. 2012

SBMSY/SB0

Page 32: The dids, dos, don’ts and developments of data-limited catch ......The dids, dos, don’ts and developments of data-limited catch limits Dr. Jim Berkson NMFS SEFSC And Dr. Jason

Improvements: Harvest control rules (HCRs)

U.S. Department of Commerce | National Oceanic and Atmospheric Administration | NOAA Fisheries | Page 32

• Decision rule that modifies catch

• Uses references points

• Incorporates uncertainty

• Oft needed connection between

D-L method and management

• May improve poorly performing

D-L method

Dowling et al. 2008

Page 33: The dids, dos, don’ts and developments of data-limited catch ......The dids, dos, don’ts and developments of data-limited catch limits Dr. Jim Berkson NMFS SEFSC And Dr. Jason

Evaluation: Simulation testing

U.S. Department of Commerce | National Oceanic and Atmospheric Administration | NOAA Fisheries | Page 33

Stock Assessment

model

Parameters

Data Derived

outputs

Management

Operating model

(OM: “true state”)

Performance

metrics

Page 34: The dids, dos, don’ts and developments of data-limited catch ......The dids, dos, don’ts and developments of data-limited catch limits Dr. Jim Berkson NMFS SEFSC And Dr. Jason

Testing methods: Comparison tests

U.S. Department of Commerce | National Oceanic and Atmospheric Administration | NOAA Fisheries | Page 34

Wetzel & Punt 2011

True

SS

DB-SRA

DCAC

Harvest Level

0.24

1.00

1.00

0.03

0.99

0.65

Pr(OF) Pr(OF)

rockfish

• Performance relative to

OM or benchmark

assessment

• Focuses on method

performance

Cope et al. in press

Page 35: The dids, dos, don’ts and developments of data-limited catch ......The dids, dos, don’ts and developments of data-limited catch limits Dr. Jim Berkson NMFS SEFSC And Dr. Jason

Evaluation: Management strategy evaluation

U.S. Department of Commerce | National Oceanic and Atmospheric Administration | NOAA Fisheries | Page 35

Stock Assessment

model

Parameters

Data Derived

outputs

Management (control rule)

Operating model

(OM: “true state”)

Performance

metrics

Page 36: The dids, dos, don’ts and developments of data-limited catch ......The dids, dos, don’ts and developments of data-limited catch limits Dr. Jim Berkson NMFS SEFSC And Dr. Jason

Testing methods: Management strategy

evaluation

• Performance

relative to OM

• Focuses on method

AND control rule

performance

Long-t

erm

yie

ld

Avg. B

iom

ass

/ B

MSY

DCAC DB-

SRA S.A. Avg. C

Probability of overfishing

Carruthers et al. 2014, Fish. Res.

Page 37: The dids, dos, don’ts and developments of data-limited catch ......The dids, dos, don’ts and developments of data-limited catch limits Dr. Jim Berkson NMFS SEFSC And Dr. Jason

Implementation

• DLMtool (R; T. Carruthers) toolkit

http://cran.r-project.org/web/packages/DLMtool/index.html

Choose models given data

MSE mode

• Science for Nature and People (SNAP)

D-L group http://www.snap.is/groups/data-limited-fisheries/

Application-based

Resource evaluation

• Using multiple models

• Not everyone is an innovator

U.S. Department of Commerce | National Oceanic and Atmospheric Administration | NOAA Fisheries | Page 37

Page 38: The dids, dos, don’ts and developments of data-limited catch ......The dids, dos, don’ts and developments of data-limited catch limits Dr. Jim Berkson NMFS SEFSC And Dr. Jason

U.S. Department of Commerce | National Oceanic and Atmospheric Administration | NOAA Fisheries | Page 38

Standardization?

Newman et al. 2014

Page 39: The dids, dos, don’ts and developments of data-limited catch ......The dids, dos, don’ts and developments of data-limited catch limits Dr. Jim Berkson NMFS SEFSC And Dr. Jason

Why don’t we have standardization?

• Regional Councils have a history of

doing things their own way.

• The data, stocks, and fisheries are

unique by region.

• We’re still in the innovation stage.

U.S. Department of Commerce | National Oceanic and Atmospheric Administration | NOAA Fisheries | Page 39

Page 40: The dids, dos, don’ts and developments of data-limited catch ......The dids, dos, don’ts and developments of data-limited catch limits Dr. Jim Berkson NMFS SEFSC And Dr. Jason

Summary/Considerations: the dids,

dos, don’ts, and developments

U.S. Department of Commerce | National Oceanic and Atmospheric Administration | NOAA Fisheries | Page 40

Page 41: The dids, dos, don’ts and developments of data-limited catch ......The dids, dos, don’ts and developments of data-limited catch limits Dr. Jim Berkson NMFS SEFSC And Dr. Jason

Summary - Context

• Era of rigid mandates

• Era of limited resources

U.S. Department of Commerce | National Oceanic and Atmospheric Administration | NOAA Fisheries | Page 41

Page 42: The dids, dos, don’ts and developments of data-limited catch ......The dids, dos, don’ts and developments of data-limited catch limits Dr. Jim Berkson NMFS SEFSC And Dr. Jason

What did we do?

• Created a lot of acronyms

• Held a lot of workshops

U.S. Department of Commerce | National Oceanic and Atmospheric Administration | NOAA Fisheries | Page 42

ACL

ABC

OFL

ACT

Catc

h

P*

Page 43: The dids, dos, don’ts and developments of data-limited catch ......The dids, dos, don’ts and developments of data-limited catch limits Dr. Jim Berkson NMFS SEFSC And Dr. Jason

Summary: Developments

U.S. Department of Commerce | National Oceanic and Atmospheric Administration | NOAA Fisheries | Page 43

D-L

methods

Improve

inputs

Ways to test

performance

Application

Decision rules

(e.g., HCRs) • DL Toolboxes

• Resource evaluation

Page 44: The dids, dos, don’ts and developments of data-limited catch ......The dids, dos, don’ts and developments of data-limited catch limits Dr. Jim Berkson NMFS SEFSC And Dr. Jason

Suggestion

U.S. Department of Commerce | National Oceanic and Atmospheric Administration | NOAA Fisheries | Page 44

• Do’s Consider multiple methods

Be creative/continue innovation

Simulation/MSE testing

Compare to benchmark assessments

Seek best practices

Common framework approach

• Don’ts Avoid “Shotgun” approach

Pseudo-replication

Beware stock complexes

Page 45: The dids, dos, don’ts and developments of data-limited catch ......The dids, dos, don’ts and developments of data-limited catch limits Dr. Jim Berkson NMFS SEFSC And Dr. Jason

End with two questions

• Will the need to conduct stock assessments on data-limited stocks go away?

• For the students attending: Are

you spending 59% of your time in relevant courses learning about these methods?

U.S. Department of Commerce | National Oceanic and Atmospheric Administration | NOAA Fisheries | Page 45

Page 46: The dids, dos, don’ts and developments of data-limited catch ......The dids, dos, don’ts and developments of data-limited catch limits Dr. Jim Berkson NMFS SEFSC And Dr. Jason

Questions

U.S. Department of Commerce | National Oceanic and Atmospheric Administration | NOAA Fisheries | Page 46