THE CHAKRAS: A SCIENTIFIC APPROACH By ALLAN R. SUSOEFF, JR. A thesis submitted in partial fulfillment of the requirements for the degree of MASTER OF METAPHYSICAL SCIENCE, M.MSC. On behalf of the Department of Graduate Studies of the University of Metaphysics this thesis has been accepted by Thesis Advisor IMM President July 24, 2017
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THE CHAKRAS: A SCIENTIFIC APPROACH
By
ALLAN R. SUSOEFF, JR.
A thesis submitted in partial fulfillment of the requirements for the degree of
MASTER OF METAPHYSICAL SCIENCE, M.MSC.
On behalf of
the Department of Graduate Studies of the University of Metaphysics
History and Background ............................................................................................................................ 6
Types of Meditation .................................................................................................................................. 7
The Mind - Body Connection .................................................................................................................... 8
The Energy - Body Connection ................................................................................................................ 11
Is it all in our Genes? ............................................................................................................................... 18
Brainwaves, High Beta, and Addiction .................................................................................................... 19
Breath IS Life ........................................................................................................................................... 21
Emotion and Intent ................................................................................................................................. 23
Tying it all Together ................................................................................................................................ 25
Works Cited ................................................................................................................................................. 32
Chapter 1: Introduction
“The difference between science and faith is a measuring tape”. Although this statement in
1979 got me an hour of detention from Fr. Stout, my earth science teacher in my freshman year at
Bellarmine College Preparatory, it is a statement that has defined my life and I believe defines the
difference between mankind and all other forms of organic and inorganic life on this planet.
Always the question in our minds is “why”. It is the driving force for technology, medicine,
religion, and our civilization in general. When we find a limitation in our understanding and come to an
impasse, it is tempting to provide answers such as, “Because God made it that way”. This may be a fine
response on a certain level, but there are always deeper levels of understanding to be had if one wishes
to comprehend the greater truths of our existence.
My life in general, and this thesis in particular, aims to look at these deeper levels of
understanding through the lens of empirical science. Within the rigors of the scientific method we can
demystify the mystical, dispel ignorance, and bring that which is in the realm of faith into the realm of
fact.
Old habits die hard. Although Pythagoras, the Greek philosopher first proposed a spherical earth
around the 6th century BC, it was not until 330 BC that Aristotle was able to show empirically that the
earth was indeed a sphere. Many other scientists did experiments that showed a spherical earth over
the following centuries. Regardless of this evidence, flat earth theories persisted. It is said that in 1492
when Columbus discovered the Americas that it was proven that the earth was indeed spherical, but the
real proof came when Magellan circumnavigated the globe in 1519. From 330 BC to 1519 AD; it took
nearly 1900 years, but that which started in the world of religious faith, became science fact eventually.
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Regarding the Chakras, or psychic centers as he calls them, Dr. Leon Masters states, “The
knowledge that these psychic centers exist comes from the INTERNAL PSYCHIC vison of their existence
during meditation in expanded states of consciousness” (Master’s Degree Curriculum 1:1:4). While this
answer to the question, “What are the chakras” is perfectly acceptable if one only wants to understand
and accept at the faith level, as a scientist and engineer, I am compelled to look deeper. I believe the
information exists and some of the peer reviewed experimentation has been conducted to show
empirically that the present-day chakras system not only exists, but that these so-called chakras can be
used by us through the tool of meditation, to further our health, creativity, and prosperity and therefore
improve our lives, the lives of others and ultimately the overall balance and evolution of this planet we
call home.
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Chapter 2: Review of Literature
The history of the chakra system has its roots in the early Upanishads which were written
around the 7th or 8th century BCE. As with anything that old, these concepts have morphed and
evolved and the seven-chakra system currently accepted in western culture bears little resemblance to
some of the earlier versions. Because of this long history, we must first come to an agreement about
what a chakra is. In order to properly discuss the chakras from a scientific perspective it is paramount
to first give a definition of a chakra as well as understand at least the basic history and background of
the current chakra system.
Dr. Leon Masters points out that, “The main practice in mysticism is that of Meditation”,
(Minister’s/Bachelors Curriculum. 1:1), and there is no doubt of that truth from the tremendous body of
evidence showing that meditation is a healthy addition to any lifestyle. The question more specific to
this thesis however is which meditation is the right meditation to effect change in a person’s health,
fiscal prosperity, creativity, and general well-being, particularly as it relates to the chakras?
Definitions
What follows are a few definitions in order to have the reader and the author not necessarily
agree, but at least be on the same page for both ease of explanation and succinctness in presentation.
We will not delve into the philosophical argument of whether this chakra system is more or less correct
than any other system that one may choose to use or follow in terms of a belief system. What we are
interested in within the pages of this thesis is whether there is scientific evidence for the existence of
chakras and if so, what knowledge can we glean from that evidence in order to better our lives and the
lives of those around us. In the spirit of that, most of the definitions adopted in this text will be taken
from either Anodea Judith’s “Wheels of Life”, Charles Webster Leadbeater’s “The Chkaras: A
Monograph” or my own combination of the two.
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Chakra, चाक्र, is a Sanskrit word which literally means “wheel”. Anodea Judith reports that
“Chakras are organizing centers for the reception, assimilation and transmission of life energies” (4).
Leadbeater referred to them as the “wheel-like vortices which exist in the surface of the etheric double
of man” (5) Simply put, a chakra is an Energy Center.
In the system we are exploring there are seven chakras, each corresponding to a particular area
of the body, specific nerve ganglia, glands, organs and each governing a particular set of emotions, and
manifestations. I will mostly be referring to them by their corresponding area of the body. From the root
chakra, known in Tantric traditions as Muladhara, मलूाधार, which literally means “root” to the crown
chakra referred to as Sahasrara, सहस्रार, which means “thousand-spoked”.
Starting at the perineum, the first chakra or “root chakra” physically corresponds to the
coccygeal nerve plexus. It is the foundational chakra and is emotionally oriented toward survival and
spiritually to grounding. Here it will be called the perineum.
The second chakra is Svadhisthana, स्वधधष्ठान. Also known as the spleen chakra by
Leadbeater, it physically corresponds to the sexual organs, the sacral nerve plexus, the bladder and
kidneys and is located just below the navel. Emotionally, this chakra governs sexuality. In this text it
will typically be referred to as the sacral center or “sacral chakra”.
The third chakra governs the solar plexus ganglia of nerves, digestive systems, pancreas and
adrenal glands. It governs our will, our assertiveness and our power but is also the seat of
those “gut feelings” we get. Its Sanskrit name is Manipura, मधि प ूर, which means “navel”. Here it
will be referred to as the solar plexus, or gut chakra.
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The heart chakra is the fourth of the seven. It is the middle chakra and all below it are
considered the more physical chakras while those above it are considered to be more spiritual.
It’s Sanskrit name, Anahata, अनाहत, literally means unstruck, unbeaten, or unwounded. How
interesting that as humans our heart many times seems to be struck repeatedly by ourselves and others
and constantly in a state of feeling beaten and wounded. The cardiac nerve plexus, respiratory and
cardiac systems and thymus glands correspond to this chakra. Here it will be simply called the heart
chakra.
Moving up, we next come to the throat chakra, Vishuddha, धधशदु्ध, meaning very pure, clean,
virtuous, and cleansed. The laryngeal nerve plexus is physically responsible for this area and the thyroid
gland is perhaps its most important physical aspect. While this chakra’s function is communication, it is
not limited to communication just in the physical realm. As Anodea Judith points out, “psychologically”
and I add spiritually, “the fifth chakra opens us to higher wisdom, our guides and our own souls (263). In
this text it will be called the throat chakra.
Anja, आज्ञा, means “command” and will be called the third eye in this text. The medulla
plexus governs this area of the body. According to Wikipedia, “It is a part of the brain which can be
made more powerful through meditation, yoga & other spiritual practices just as a muscle is”. The pineal
gland is located in this area and governed by this plexus of nerves. Emotionally, this is where perception,
intuition and Self-realization occur.
Finally, the Sahasrara chakra, सहस्रार, is the “thousand spoked” seat of spirituality. It is our
connection to the Universe, Source, God or whatever you choose to call it. When one thinks of
the Universe in terms of quantum physics and sees that we are beings with infinite potentials living
in a universe with limitless potentials, it is easy to see how the ancients described this
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connection as a wheel with one thousand spokes. The pituitary gland is regulated through this chakra.
Here is will be simply called the crown chakra.
History and Background
Dr. Christopher Wallis, Ph.D. reports that the current seven chakra system is relatively young
compared to the many chakra systems which developed out of the Tantric Yoga, (more properly spelled,
Tantrick Yoga) traditions which flourished in and around India from about 600-1300 CE. There are five-
According to Dr. Wallis, there are only a few areas of the physical body that correspond to all
charka systems and they relate to emotional and spiritual experiences; these are the lower belly, the
heart, and the crown of the head. He refers to the chakras as prescriptive, not descriptive; meaning,
“they tell what you ought to do to achieve a specific goal by mystical means”(Wallis, n.p.).
That being said, we should not simply discount this more recent version of the chakra system as
false simply because it is the youngest. Life is all about evolution and change and growth. Perhaps this
more recent version can be proven or disproven through the help of scientific method.
The seven-chakra system used in western yoga and referred to by Dr. Leon Masters in the Hatha
Yoga section of the Masters Curriculum comes from a Sanskrit text known as the Shat-chakra-nirūpana
or “Explanation of the Six Chakras” by Pūrnānanda Yati. It was written in 1526. It describes the chakras
both in terms of subtle energies and in terms of physical locations in the body. For example, using the
translation from Sanskrit of Sir John Woodroffe in The Serpent Power, we see in the first verse,
“In the space outside the Meru, placed on the left and the right, are the two Siras, Sasi and Mihira. The Nadi Susumna, whose substance is the threefold Gunas, is in the middle. She is the
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form of Moon, Sun, and Fire; Her body, a string of blooming Dhatura flowers, extends to the middle of the Kanda to the Head, and the Vajra inside Her extends, shining, from the Medhra to the Head.” (320)
Note the mention of Nadi. This can mean “pulse”, “vein”, “nerve” or any tubular organ of the
body. Susumna refers to an artery or vein of the body, in this case the one which carries “the form of
the Moon, Sun and Fire” which are all great sources of energy. On a more metaphysical level the
threefold Gunas (sattva, rajas, tamas) also refer to balance/harmony, activity/aggressiveness, and
inertia/passivity. Meru literally means “mountain”, but moreover refers to the vertebral column of the
human body. Sira refers to veins or lines which cross like veins. Mihira and Sasi are the Sun and the
moon. Here we see a text both metaphysical and physical; both technical and poetic. Could it be that
the author was able to bring together the esoteric knowledge of those who came before and match it to
our physical bodies?
Types of Meditation
Virtually all meditation practices involve some level of breath control and mindfulness. Whether
one recites a mantra, holds the body in a particular posture or simply concentrates one’s energy on an
area of the body, how one breathes is of paramount importance. To this end there are many ways to
accomplish the altered state of meditation. According to Tamera Lechner, an author and meditation
instructor with The Chopra Center, meditation falls into five basic categories; primordial sound
meditation, mindfulness-based stress reduction, Zen meditation, kundalini yoga, and transcendental
meditation.
Primordial Sound Meditation has its roots in ancient Vedic traditions. As a student of this
meditation one receives a mantra or vibration that according to the tradition was present at the time of
the meditators birth. This mantra is calculated through Vedic mathematic formulas and is then provided
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to the meditator who silently repeats the mantra in their meditation. The idea is that this mantra helps
the student to enter the inner silence of their mind within the meditation.
Zen meditation comes from Buddhist traditions and uses a combination of breathing techniques
and observation of one’s own mind, all accomplished through the interaction of an instructor to attain
an enlightened state.
Transcendental Meditation makes use of mantras for purposes of focus. There is still breathing
and awareness of the breath involved, but there seems to be a large degree of emphasis on the mantra
itself.
Mindfulness based Stress Reduction (MSBR) is a type of meditation started by Jon Kabat-Zinn in
1979. This meditation uses both breath awareness and body scan and is primarily used by medical
centers to help patients with relaxation. MBSR does not require the use of a mantra.
Kundalini Yoga Meditation uses breath, mantra, and mudra (which is hand position) as well as
focus. This type of meditation has both the largest depth and breadth of styles within it as it’s founder,
Yogi Bhajan created hundreds of very specific meditations and teachers who followed have added to the
discipline.
The meditation I will be discussing in this thesis will be a combination of Mindfulness-based
meditation and kundalini yoga meditation. I was first exposed to it through the work of Dr. Joe Dispenza
in his live seminars.
The Mind - Body Connection
All empirical evidence aside, we should first consider the Holy Books of antiquity which, though
they do not contain much in the way of hard science, still tell us that there is no separation between
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mind and body. After all, if one reads the New King James Version of the Holy Bible one will find that,
when a centurion asked Jesus to heal his servant, Jesus replied saying “Go your way and as you have
believed, so let it be done for you" (Matthew 8:13). A,C Bhaktivedanta Swami Prabhupāda, the
translator and editor of Bhagavad-Gita: As Is tells us, “The material body of the indestructible,
immeasurable and eternal living entity is sure to come to an end; therefore, fight, O descendent of
Bharata” (Bhagavad Gītā 2:18). Further, The Holy Qur’an states “But He fashioned him in due
proportion, and breathed into him something of His Spirit” (Al-Sajda, 32: 9). And finally, Buddha has
said, “We are what we think. All that we are arises with our thoughts. With our thoughts, we make the
world” (Byron, 3).
The concept that the mind and the body are in no way connected has been around since
Aristotle but in the 17th century, René Descartes, proposed a theory that “the human body may be
considered a machine so built and composed of bones, nerves, muscles, veins, blood and skin that even
if there were no mind in it, it would not cease to move in the way it does at present when it is not
moved under the direction of the will” (Descartes, 60). With that thought, the schism between body and
mind and indeed between eastern and western medicine was born. Conversely, Dr. Leon Masters points
out in the Minister’s/ Bachelor’s Degree Course Study Modules that “Your physical brain is merely a
vehicle that is used by your true mind, which is a field of energy” (1:8). In order to empirically show the
existence of the chakras, it seems a logical first step that one must show a connection between the mind
and the body. Thanks to advancements in neuroscience, quantum physics, epigenetics and the biological
science of signal transduction, we can now dispel the myth that the mind and the body are not
intimately connected.
Dr. Candace Pert, Ph.D. tells us in her 1997 book, Molecules of Emotion that, “Recent
technological innovations have allowed us to examine the molecular basis of the emotions, and to begin
to understand how the molecules of our emotions share intimate connections with, and are indeed
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inseparable from, our physiology. “ It is the emotions, I have come to see, that link mind and body” (19).
Her work with neurotransmitters, steroids and peptides originally paved the way to finding the “opiate
receptor” which is the part of the surface of cells within the brain’s limbic system that respond to
enkephalin, endorphin and dynorphin which are naturally created “feel good” drugs originating from the
pituitary gland and distributed throughout the body via the central nervous system. She and her
associates found that when a body is stressed or in pain, stress being an emotional stimulus while pain is
a physical stimulus, the pituitary gland secretes these chemicals which travel to receptors on the surface
of the cells of the brain and cause a chemical reaction at the cellular level which makes the pain and
stress abate, or at least decrease.
Dr. Bruce Lipton, Ph.D. in his book, The Biology of Belief found that, “Thought ‘energy’ can
activate or inhibit the cells function-producing proteins via the mechanics of constructive and
destructive interference" (95). What this means is that there seems to be an ingrained, perhaps even
genetic hierarchy at the cellular level which responds to our thoughts and beliefs. What we believe is
typically what we think; if we did not believe it then it would never enter our mind. Simply put, what we
think, is what we get. Enter the placebo effect. The placebo effect is the phenomenon wherein a patient
receives a false treatment, a placebo, however their belief is so strong in the treatment that they
recover anyway. This has been well documented starting in 1955 by anesthesiologist Henry K Beecher.
Beecher found that an average of 35.2% of patients responded to placebo. (Beecher 1606).
I do not plan to spend an inordinate amount of time discussing placebos but I want to further
point out what Dr. Joe Dispenza said regarding recent neurological research: “If a person keeps taking
the same substance, his or her brain keeps firing the same circuits in the same way-in effect, memorizing
what the substance does. The person can easily become conditioned to the effect of a particular pill or
injection from associating it with a familiar internal change from past experience. Because of this kind of
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conditioning, when the person then takes a placebo, the same hardwired circuits will fire as when he or
she took the drug. An associative memory elicits a subconscious program that makes a connection
between the pill or injection and the hormonal change in the body and in the program automatically to
make the related chemicals found in drug” (39).
The Energy - Body Connection
While it is important to establish a connection and relationship between the mind and body; it is
equally important for our discussion of the chakras and meditation to establish a connection between
energy fields and the body. In her book, The Subtle Body: An Encyclopedia of Your Energetic Anatomy,
Cyndi Dale describes two types of energy fields veritable which is that the can be measured and putative
or subtle which cannot be measured directly given the technology we have at this time. Perhaps before
we get into the energy – body connection we should discuss a bit about these energy fields.
Veritable energy fields are measurable and consist of electromagnetic energy and sound energy.
There are seven major types of electromagnetic radiation in each of them varying in frequency and
wavelength. The seven types that we are most familiar with are "radio waves, microwaves, infrared
waves, visible light, ultraviolet light, x-rays, and gamma rays. Radio waves are the lowest frequency and
have the longest wavelength while gamma rays have the highest frequency and shortest wavelength."
Sound energy also called sound waves are considered mechanical. Cyndi Dale states, “they are defined
as a disturbance that transports energy through a medium via the mechanic mechanism of particle
interaction, which means that sound waves are generated by some sort of interaction” (98).
Subtle energy fields are substantially more complex. Many have yet to be discovered although
there is some evidence as to their existence. “Every cell in the body and every thought generates a field.
Every energy body, Meridian, and chakra pulses its own field. In total, the field emanating from your
body alone would occupy more space-or empty space than your physical self. In many ways, you are
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your fields.” (99). Ms. Dale goes into detail that is unnecessary for purposes of this thesis but for sake of
general understanding, several of these fields will be briefly discussed.
Within, and around our bodies we have a plethora of subtle fields. The fields are not simply at
the surface or beyond, but permeate our being at a cellular and even sub atomic level. To say they
“permeate” us, is even less than accurate. We know from Newtonian and quantum physics that atoms
are really just energy slowed down in terms of vibration or frequency in such a way as to appear as
matter. It then logically follows that the atoms which our bodies are comprised of are merely energy, or
to look at it a different way, we are comprised of varying degrees of vibration and frequency. This
vibration exists in particular planes or fields, and many scientists and mystics hypothesize that the fields
are as vast and infinite as the universe itself.
The human energy field is the field we will be principally concerning ourselves with in this paper.
A few fields that we will not be discussing, but merit mention for sake of this paper are geofields which
are veritable and subtle earth energies such as the Schumann resonance, the universal light field also
called the “zero-point field” in quantum physics, and morphological field which allows psychic
communication between those of the same species and information exchange between generations.
“The human energy field is primarily composed of the aura, a set of energy bands that graduate in
frequency and color as they move outward from the body. Each of the auric fields opens to different
energy planes and energy bodies and also partners with a chakra, thus exchanging information between
the world outside and inside the body.” (99)
The human energy field can be further divided into layers. Barbara Ann Brennan, in Hands of
Light explains that within the auric field are 7 “layers” which constitute each of the seven chakras. “Each
layer of the aura is associated with a chakra… Thus there are specific locations within our energy system
for the sensations, emotions, thoughts, memories and other nonphysical experiences that we report to
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our doctors and therapists. Understanding how our physical symptoms are related to these locations
will help us understand the nature of different illnesses and also the nature of both health and disease.
Thus the study of the aura can be a bridge between traditional medicine and our psychological
concerns.” (43).
If the chakras exist within layers of the human energy field, and if humans are in fact dynamic
creatures, which is self-evident, then just because we cannot measure these energy fields directly does
not mean we cannot prove their existence by measuring them indirectly. This may seem like
pseudoscience to some but I would point out that there is a tremendous veritable energy that we know
exists, we harness its power on a daily basis, we have observed its effects since the dawn of time,
however we have never seen it. That energy is called “wind”. Wind, by definition, is the movement of
gases on a large scale. We never see the wind, we only see the effect the wind makes. We do not
measure the wind; we measure the change in position of particles moved by the wind, velocity, density
of gases involved and the energy exchange based on these properties. There is no reason why we
cannot measure the chakras and the related energy fields in the same fashion. And at least one scientist
already has.
Hiroshi Motoyama was a Japanese scientist and parapsychologist who did tremendous research
and experimentation in the realm of psychic phenomenon, acupuncture and Chi energy from Chinese
medicine, chakra energy from yogic traditions and the relationships of each of these systems to one
another. Motoyama reasoned that the subtle energies of psi phenomenon, chakra and nadi energies
and Chi should all effect measurable changes within the electromagnetic field (EMF) around a subject
employing them or around an object that subject may be concentrating his or her subtle energies on. In
order to measure such energy ejection from the chakras he constructed a machine which he simply
called the “Chakra Machine”. The following is a brief description of his apparatus.
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“This machine consists of an electrode box (placed inside a lead shielded room), somewhat resembling a telephone booth, with two copper electrodes on the top and bottom (floor and ceiling) and a sliding square panel with electrodes attached on all four sides (left-right, front- back) which is free to traverse up and down the frame structure so as to be positioned at any part of a person’s body. An electromagnetic field is set up between the electrodes, and as the subject stand inside the box without any electrode directly touching his body (30-40 cm from the body), any energy ejected from the body can be detected as a change in this electromagnetic field” (5-6).
Dr. Motoyama, placed the movable electrode sensors at various locations while his test subjects
concentrated on a particular area of the body which would correspond to a particular chakra in the
seven-chakra system. He noted changes in the electromagnetic field when the subjects were
concentrating on particular areas and when they were not. He also noted larger changes in the subjects
who professed the ability to concentrate on a particular chakra versus those who professed no ability
whatsoever to concentrate on said area.
At the very least this experiment proves that a person can change their electromagnetic field
simply by changing the way they think about a certain area of the body; concentrating on it or not
concentrated on it. This experiment alone does not provide conclusive evidence of the existence of
chakras, however, it does show that we can affect a change in our own bodies.
Dr. Motoyama did not stop with this experiment. He produced another machine he called The
Apparatus for Measuring the Functions of the Meridians and the Corresponding Internal Organs (AMI),
in order to measure Chi energy from the acupuncture system of Chinese medicine using points on “the
tips of the fingers and toes called ‘seiketsu’ points where meridians of acupuncture begin or end.” (9)
These points are thought to be the areas from which Chi energy flows in or out of the body and are
located at the end of the meridians. A description of the AMI is too complex for the scope of this thesis
however what is important is that in over 2000 test subjects Dr. Motoyama, was able to collect a
tremendous amount of data which showed from the sheer numbers involved when an internal organ
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such as the bladder, kidneys, lungs or heart is functioning normally, and from that information he was
able to extrapolate when the same organ functioned either below or above normal.
Dr. Motoyama found that a correlation existed between energy ejection from chakra points, and
energy activity in corresponding meridian points. He gives an example of a subject who was able to
activate his third eye chakra, which he recorded with the Chakra Machine and also showed high energy
on the AMI corresponding to the “Jo-tanden” meridian, which although it is the connecting point of the
urinary-bladder and small intestine meridians, (organs located in a completely different area of the
body), happens to be located in the same position on the body as the chakra.
Professor Valerie Hunt also did pioneering work on the study of chakras. “She found that when
the focus of a person's consciousness was anchored in the physical world, their energy field registered
the frequencies in the range of 250 cps (cycles per second). This is close to the body's own biological
frequency. Active psychics and healers, however, registered in a band between 400 and 800 cps. Trance
specialists and chanellers registered in a narrow field of 800-900 cps, but from 900 cps onwards Hunt
correlated what she termed 'mystical personalities' who had a firm sense of the cosmic interconnections
between everything. They were anchored in reality, possessed psychic and healing abilities, were able to
enter deep trance states, yet had transcended and unified the separate experiences through a mystic,