TAIR Workshop

TAIR Workshop

Eva HualaDonghui Li

TAIR is used worldwide

2,245 TAIR visits from Beijing May 30 – June 11

Beijing

This workshop will cover: Introduction to TAIR (19:30 – 19:50)

Arabidopsis genome annotation (19:50 – 20:10) TAIR7 release

Gene function annotation (20:10 – 20:40) GO and PO controlled vocabularies

AraCyc (20:40 – 21:00) Metabolic pathway database

What is TAIR*? NSF-funded project begun in 1999 Web resource for Arabidopsis data and stocks Literature-based manual annotation of gene function Genome annotation (gene structure, computational gene

function)

*

URL

Introduction to TAIR TAIR website

Searching Popular tools How to order stocks How to find help

Portals

Tools

Search

Two ways to search in TAIRQuick Search

Advanced Search

ufo

Quick Search

Names

Description

GO annotations

Expression

Sequences

Maps

Mutations

Seed lines

Links to othersites

Seed lines

Links to othersites

Seed lines

Links to othersites

Seed lines

Links to othersites

Seed lines

Links to othersites

Comments

References

Most popular tools at TAIR BLAST Genome Browsers

SeqViewer GBrowse (coming soon)

AraCyc

GBrowse - coming soon

How to order stocks at TAIR Register yourself at TAIR Associate yourself to a lab Wait 1-2 days for account activation

Search for seed or DNA stocks Order stocks Pay by credit card, check or money order

mcclintock

Very important!

How to find help at TAIR Click on Help Click on Email us at [email protected]

?