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Surveillance, Epidemiology, and Tracing Overview Adapted from the FAD PReP/NAHEMS Guidelines: Surveillance, Epidemiology, and Tracing (2014).
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Surveillance, Epidemiology, and Tracing Overview Adapted from the FAD PReP/NAHEMS Guidelines: Surveillance, Epidemiology, and Tracing (2014).

Dec 31, 2015

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Page 1: Surveillance, Epidemiology, and Tracing Overview Adapted from the FAD PReP/NAHEMS Guidelines: Surveillance, Epidemiology, and Tracing (2014).

Surveillance, Epidemiology, and Tracing

Overview

Adapted from the FAD PReP/NAHEMS Guidelines: Surveillance, Epidemiology, and Tracing (2014).

Page 2: Surveillance, Epidemiology, and Tracing Overview Adapted from the FAD PReP/NAHEMS Guidelines: Surveillance, Epidemiology, and Tracing (2014).

• Introduction to when and why• Definitions for technical terms• Organizational structure• Overview of Surveillance Plan

USDA APHIS and CFSPHFAD PReP/NAHEMS Guidelines: Surveillance, Epi, and Tracing - Overview

This Presentation

Page 3: Surveillance, Epidemiology, and Tracing Overview Adapted from the FAD PReP/NAHEMS Guidelines: Surveillance, Epidemiology, and Tracing (2014).

Surveillance, Epidemiology, and Tracing

Activities

USDA APHIS and CFSPHFAD PReP/NAHEMS Guidelines: Surveillance, Epi, and Tracing - Overview

Page 4: Surveillance, Epidemiology, and Tracing Overview Adapted from the FAD PReP/NAHEMS Guidelines: Surveillance, Epidemiology, and Tracing (2014).

• Foreign animal disease (FAD) – Terrestrial or aquatic disease or pest not

known to exist in the United States• High pathogenicity avian influenza

• Foot-and-mouth-disease

– Preventive measures for introduction• Import restrictions

• Exclusion activities at borders/ports of entry

• Public education programs

USDA APHIS and CFSPHFAD PReP/NAHEMS Guidelines: Surveillance, Epi, and Tracing - Overview

Introduction

Page 5: Surveillance, Epidemiology, and Tracing Overview Adapted from the FAD PReP/NAHEMS Guidelines: Surveillance, Epidemiology, and Tracing (2014).

• FAD investigation– Initiated if an FAD is suspected• Foreign Animal Disease Diagnostician

• Guidance Document 12001

• APHIS FAD PReP Manual 4-0

• Once an FAD is confirmed– Surveillance, epidemiology, and tracing

response components are activated• Provide real-time understanding

• Enable decisions on interventionsUSDA APHIS and CFSPHFAD PReP/NAHEMS Guidelines: Surveillance, Epi, and Tracing - Overview

Introduction (cont’d)

Page 6: Surveillance, Epidemiology, and Tracing Overview Adapted from the FAD PReP/NAHEMS Guidelines: Surveillance, Epidemiology, and Tracing (2014).

• Surveillance, epidemiology, and tracing techniques are used to:– Detect cases– Understand disease characteristics– Identify risk factors – Provide information for decision-making– Design and implement control measures– Evaluate the effectiveness of the control

measures implemented

USDA APHIS and CFSPHFAD PReP/NAHEMS Guidelines: Surveillance, Epi, and Tracing - Overview

Purpose

Page 7: Surveillance, Epidemiology, and Tracing Overview Adapted from the FAD PReP/NAHEMS Guidelines: Surveillance, Epidemiology, and Tracing (2014).

• Surveillance– An intensive form of data recording that

encompasses gathering, documenting, and analyzing data

• Epidemiology– The study of the distribution of disease in

populations and of factors that determine its occurrence

• Tracing – Information gathering on recent movements of

animals, personnel, vehicles, and fomites to identify potential spread of disease, and source

USDA APHIS and CFSPHFAD PReP/NAHEMS Guidelines: Surveillance, Epi, and Tracing - Overview

Definitions

Page 8: Surveillance, Epidemiology, and Tracing Overview Adapted from the FAD PReP/NAHEMS Guidelines: Surveillance, Epidemiology, and Tracing (2014).

USDA APHIS and CFSPHFAD PReP/NAHEMS Guidelines: Surveillance, Epi, and Tracing - Overview

Zone/Area Designations

Summary of Zone and Area DesignationsInfected Zone (IZ) Zone that immediately surrounds an infected Premises

Buffer Zone (BZ) Zone that immediately surrounds an Infected Zone or Contact Premises

Control Area (CA) Consists of an Infected Zone and Buffer Zone

Surveillance Zone (SZ) Zone outside and along the border of a Control Area

Vaccination Zone (VZ) Emergency Vaccination Zone is classified as either Containment Vaccination Zone (typically inside the control area) or Protection Vaccination Zone (typically outside Control Area). This may be a secondary zone designation

Page 9: Surveillance, Epidemiology, and Tracing Overview Adapted from the FAD PReP/NAHEMS Guidelines: Surveillance, Epidemiology, and Tracing (2014).

• Incident Command System (ICS)– Flexible and scalable • Number and names

of deployed groups will vary

– Planning and Operations Sections

– Incident Action Plan

USDA APHIS and CFSPHFAD PReP/NAHEMS Guidelines: Surveillance, Epi, and Tracing - Overview

Incident Command System

Page 10: Surveillance, Epidemiology, and Tracing Overview Adapted from the FAD PReP/NAHEMS Guidelines: Surveillance, Epidemiology, and Tracing (2014).

Surveillance and Epidemiology

USDA APHIS and CFSPHFAD PReP/NAHEMS Guidelines: Surveillance, Epi, and Tracing - Overview

Page 11: Surveillance, Epidemiology, and Tracing Overview Adapted from the FAD PReP/NAHEMS Guidelines: Surveillance, Epidemiology, and Tracing (2014).

• During an FAD outbreak, surveillance plays a key role in:– Identifying the infectious agent

– Determining the scope of the outbreak

– Assessing the effectiveness of eradication and control efforts

– Demonstrating a return to disease free status

USDA APHIS and CFSPHFAD PReP/NAHEMS Guidelines: Surveillance, Epi, and Tracing - Overview

Role of Surveillance

Page 12: Surveillance, Epidemiology, and Tracing Overview Adapted from the FAD PReP/NAHEMS Guidelines: Surveillance, Epidemiology, and Tracing (2014).

• Disease description• Surveillance objectives• Stakeholders and responsible parties• Population description• Case definitions• Data sources• Sampling methods• Diagnostic tests

USDA APHIS and CFSPHFAD PReP/NAHEMS Guidelines: Surveillance, Epi, and Tracing - Overview

Surveillance Plan Elements

Page 13: Surveillance, Epidemiology, and Tracing Overview Adapted from the FAD PReP/NAHEMS Guidelines: Surveillance, Epidemiology, and Tracing (2014).

• Suspect case– Animal showing clinical signs compatible

with FAD

• Presumptive positive case– Animal with clinical signs consistent with

FAD and positive test results

• Confirmed positive case– Agent has been isolated and identified

using approved tests

USDA APHIS and CFSPHFAD PReP/NAHEMS Guidelines: Surveillance, Epi, and Tracing - Overview

Case Definitions

Page 14: Surveillance, Epidemiology, and Tracing Overview Adapted from the FAD PReP/NAHEMS Guidelines: Surveillance, Epidemiology, and Tracing (2014).

Data Sources

• Livestock producers

• Veterinarians

• Livestock organizations

• Disease reporting or notification systems

• Control programs

• Sentinel units

• Post mortem diagnostic specimen collection

• Wildlife data

USDA APHIS and CFSPHFAD PReP/NAHEMS Guidelines: Surveillance, Epi, and Tracing - Overview

Page 15: Surveillance, Epidemiology, and Tracing Overview Adapted from the FAD PReP/NAHEMS Guidelines: Surveillance, Epidemiology, and Tracing (2014).

• Considerations for accurate and practical sampling methods:– Sample type

– Sample size

– Random sampling vs. targeted sampling

– Sampling duration and frequency

– Sample areas/locations

– Availability of diagnostic tests

– Pooled testing

USDA APHIS and CFSPHFAD PReP/NAHEMS Guidelines: Surveillance, Epi, and Tracing - Overview

Sampling Methods

Page 16: Surveillance, Epidemiology, and Tracing Overview Adapted from the FAD PReP/NAHEMS Guidelines: Surveillance, Epidemiology, and Tracing (2014).

Types of Specimens

• Blood or serum

• Skin or vesicular lesions– Epithelial tissue

or vesicular fluid

• Feces, rectal swabs, cloacal swabs, or genital tract swabs

• Nasal, oral, or oropharyngeal swabs

• Nasal discharge, saliva, tears

• Semen samples

• Tissues– Tonsil, spleen,

kidney, liver, lymph node, lung, brain, etc.

• Milk

• Environmental samples

USDA APHIS and CFSPHFAD PReP/NAHEMS Guidelines: Surveillance, Epi, and Tracing - Overview

Page 17: Surveillance, Epidemiology, and Tracing Overview Adapted from the FAD PReP/NAHEMS Guidelines: Surveillance, Epidemiology, and Tracing (2014).

• Surveillance– Ongoing data collection, analysis,

interpretation, and dissemination

– Used to determine specific actions for FAD mitigation

• Field investigation– Used to collect additional information

about cases identified via surveillance• Disease source, history of disease, etc.

USDA APHIS and CFSPHFAD PReP/NAHEMS Guidelines: Surveillance, Epi, and Tracing - Overview

Core Functions

Page 18: Surveillance, Epidemiology, and Tracing Overview Adapted from the FAD PReP/NAHEMS Guidelines: Surveillance, Epidemiology, and Tracing (2014).

• Analytic studies– Utilizes information gleaned from

surveillance activities and field investigations

– Disease rates and risk factors

• Evaluation– Effectiveness

– Efficacy

– Impact of activities

USDA APHIS and CFSPHFAD PReP/NAHEMS Guidelines: Surveillance, Epi, and Tracing - Overview

Core Functions (cont’d)

Page 19: Surveillance, Epidemiology, and Tracing Overview Adapted from the FAD PReP/NAHEMS Guidelines: Surveillance, Epidemiology, and Tracing (2014).

• Endemic– Present in a population or geographical

area at times

• Outbreak– Occurrence of more cases of disease than

expected in a given area, or a specific group, over a particular time period

• Pandemic – An outbreak/epidemic that has spread

over several countries

USDA APHIS and CFSPHFAD PReP/NAHEMS Guidelines: Surveillance, Epi, and Tracing - Overview

Disease Occurrence

Page 20: Surveillance, Epidemiology, and Tracing Overview Adapted from the FAD PReP/NAHEMS Guidelines: Surveillance, Epidemiology, and Tracing (2014).

• A characteristic that is associated with an increase in the occurrence of a particular disease

• May include:– Age

– Species

– Location

– Contact

USDA APHIS and CFSPHFAD PReP/NAHEMS Guidelines: Surveillance, Epi, and Tracing - Overview

Risk Factors

Page 21: Surveillance, Epidemiology, and Tracing Overview Adapted from the FAD PReP/NAHEMS Guidelines: Surveillance, Epidemiology, and Tracing (2014).

• Prevent contact between the FAD agent and susceptible animals– Quarantine, movement controls,

biosecurity procedures, target depopulation

• Stop production of FAD agent by infected or exposed animals– Slaughter or mass depopulation

• Increase the disease resistance of susceptible animals to the FAD agent– Emergency vaccination

USDA APHIS and CFSPHFAD PReP/NAHEMS Guidelines: Surveillance, Epi, and Tracing - Overview

Epidemiological Principles

Page 22: Surveillance, Epidemiology, and Tracing Overview Adapted from the FAD PReP/NAHEMS Guidelines: Surveillance, Epidemiology, and Tracing (2014).

• Generally, disease outbreaks are investigated in three phases:– Descriptive phase

– Analytic phase

– Intervention phase

USDA APHIS and CFSPHFAD PReP/NAHEMS Guidelines: Surveillance, Epi, and Tracing - Overview

Phases of Investigation

Page 23: Surveillance, Epidemiology, and Tracing Overview Adapted from the FAD PReP/NAHEMS Guidelines: Surveillance, Epidemiology, and Tracing (2014).

Tracing Animal Movements

USDA APHIS and CFSPHFAD PReP/NAHEMS Guidelines: Surveillance, Epi, and Tracing - Overview

Page 24: Surveillance, Epidemiology, and Tracing Overview Adapted from the FAD PReP/NAHEMS Guidelines: Surveillance, Epidemiology, and Tracing (2014).

• Trace-back– Animals, animal products, fomites,

people, vehicles, equipment, and possible vectors that have been moved onto an Infected Premises

– Establish the origin of the agent/hazard

USDA APHIS and CFSPHFAD PReP/NAHEMS Guidelines: Surveillance, Epi, and Tracing - Overview

Tracing

Page 25: Surveillance, Epidemiology, and Tracing Overview Adapted from the FAD PReP/NAHEMS Guidelines: Surveillance, Epidemiology, and Tracing (2014).

• Trace-forward– Animals, animal products, fomites,

people, vehicles, equipment, and possible vectors that have left the Infected Premises

USDA APHIS and CFSPHFAD PReP/NAHEMS Guidelines: Surveillance, Epi, and Tracing - Overview

Tracing (cont’d)

Page 26: Surveillance, Epidemiology, and Tracing Overview Adapted from the FAD PReP/NAHEMS Guidelines: Surveillance, Epidemiology, and Tracing (2014).

• A variety of strategies are required to contain, control and/or eradicate an FAD– Biosecurity

– Health and safety

– Personal protective equipment

– Cleaning and disinfection

– Quarantine and movement control

USDA APHIS and CFSPHFAD PReP/NAHEMS Guidelines: Surveillance, Epi, and Tracing - Overview

Additional Operational Procedures

Page 27: Surveillance, Epidemiology, and Tracing Overview Adapted from the FAD PReP/NAHEMS Guidelines: Surveillance, Epidemiology, and Tracing (2014).

• FAD PReP/NAHEMS Guidelines: Surveillance, Epidemiology, and Tracing, and SOP: Surveillance – http://www.aphis.usda.gov/fadprep

• Surveillance, Epidemiology, and Tracing web-based training module– http://naherc.sws.iastate.edu/

USDA APHIS and CFSPHFAD PReP/NAHEMS Guidelines: Surveillance, Epi, and Tracing - Overview

For More Information

Page 28: Surveillance, Epidemiology, and Tracing Overview Adapted from the FAD PReP/NAHEMS Guidelines: Surveillance, Epidemiology, and Tracing (2014).

Authors (CFSPH)• Kerry Leedom Larson, DVM, MPH, PhD,

DACVPM• Glenda Dvorak, DVM, MPH, DACVPM• Janice Mogan, DVM• Courtney Blake, BA

Reviewers (USDA APHIS VS)• Dr. R. Alex Thompson• Dr. Lowell Anderson• Dr. Steve Goff• Dr. Fred Bourgeois

USDA APHIS and CFSPHFAD PReP/NAHEMS Guidelines: Surveillance, Epi, and Tracing - Overview

Guidelines Content

Page 29: Surveillance, Epidemiology, and Tracing Overview Adapted from the FAD PReP/NAHEMS Guidelines: Surveillance, Epidemiology, and Tracing (2014).

Acknowledgments

Development of this presentation was

by the Center for Food Security and

Public Health at Iowa State University

through funding from the USDA APHIS

Veterinary Services

PPT Authors: Patricia Futoma, Veterinary Student; Kerry Leedom Larson, DVM, MPH, PhD, DACVPM

Reviewers: Janice Mogan, DVM, Melissa Lang, BS