Top Banner
Dr. Jnanendra Rath Visva-Bharati Culture Collection of Algae (VBCCA, WDCM-931) Dept. of Botany, Visva-Bharati University Santiniketan- India [email protected] Sub-aerial algal diversity in the biofilms of terracota temples of Bishnupur, West Bengal, India and their Biotechnological potential
40

Sub-aerial algal diversity in the biofilms of terracota …Santiniketan- India [email protected] Sub-aerial algal diversity in the biofilms of terracota temples of Bishnupur,

Mar 13, 2020

Download

Documents

dariahiddleston
Welcome message from author
This document is posted to help you gain knowledge. Please leave a comment to let me know what you think about it! Share it to your friends and learn new things together.
Transcript
Page 1: Sub-aerial algal diversity in the biofilms of terracota …Santiniketan- India jrath@visva-bharati.ac.in Sub-aerial algal diversity in the biofilms of terracota temples of Bishnupur,

Dr. Jnanendra RathVisva-Bharati Culture Collection of Algae (VBCCA, WDCM-931)

Dept. of Botany, Visva-Bharati UniversitySantiniketan- India

[email protected]

Sub-aerial algal diversity in the biofilms of terracota temples of Bishnupur, West Bengal, India and their

Biotechnological potential

Page 2: Sub-aerial algal diversity in the biofilms of terracota …Santiniketan- India jrath@visva-bharati.ac.in Sub-aerial algal diversity in the biofilms of terracota temples of Bishnupur,

Bisnupur is famous for its beautifulterracotta temples of 16th century

Gradually these monuments showalarming symptoms of deterioration dueto growth of biological forms in the formof thick mat/crust or biofilms on theirsurfaces

During summer the temperature on themonuments rock surfaces goes beyond600 C, coupled with high light intensityand extreme dryness, however in suchinhospitable environment certainspecies of cyanobacteria were found tosurvive

Page 3: Sub-aerial algal diversity in the biofilms of terracota …Santiniketan- India jrath@visva-bharati.ac.in Sub-aerial algal diversity in the biofilms of terracota temples of Bishnupur,

Crusts / mats:

Microbial crust in monuments:

The organisms in the crust liberated organic matter to the substratumwhich helps in the growth of other micro-organisms.

Most of these archaeologically important monuments look blackish-brown due toexcessive growth of the Cyanobacteria as crusts/ mats creates problem forconservation of the ancient monuments around the world.

A crust is a result of intimate associationbetween the substrate and themicroorganisms which live within orimmediately on the top of theuppermost layer of the substratumknow as microbial crust.

Our work showed that the microorganisms forming the biofilms on sub-aerialsurfaces in tropical zones like India (also in Mexico and Brazil) principally composedof filamentous sheathed nitrogen fixing cyanobacteria where as temperate region(North America, UK, France, Germany, Austria, Italy, Spain, Czech Republic, Slovakiaand Ukrine) they are principally green micro-algae intermingled with lichens.

Page 4: Sub-aerial algal diversity in the biofilms of terracota …Santiniketan- India jrath@visva-bharati.ac.in Sub-aerial algal diversity in the biofilms of terracota temples of Bishnupur,

Still Survived

Database, Linnaeus-II, World biodiversity

database

Survival strategies of Crust

Cyanobacteria

UV-absorbing pigmentCarotenoids

Exo-polysaccharide

Antioxidant (SOD)

Biosunscreenproduct

Bioethanol

SOD Pill and ant-ageing product

How ?

Control measures and Conservation of

monuments

?

Page 5: Sub-aerial algal diversity in the biofilms of terracota …Santiniketan- India jrath@visva-bharati.ac.in Sub-aerial algal diversity in the biofilms of terracota temples of Bishnupur,
Page 6: Sub-aerial algal diversity in the biofilms of terracota …Santiniketan- India jrath@visva-bharati.ac.in Sub-aerial algal diversity in the biofilms of terracota temples of Bishnupur,
Page 7: Sub-aerial algal diversity in the biofilms of terracota …Santiniketan- India jrath@visva-bharati.ac.in Sub-aerial algal diversity in the biofilms of terracota temples of Bishnupur,

SUMMER

DURING / AFTER MANSOON

Excessive growth of thecyanobacteria in subsequentyears provide suitablehabitats to supportappearance of bryophytesand other higher plants whichgreatly damage thesemonuments.

Page 8: Sub-aerial algal diversity in the biofilms of terracota …Santiniketan- India jrath@visva-bharati.ac.in Sub-aerial algal diversity in the biofilms of terracota temples of Bishnupur,

Crusts collected from different sites by non-destructive method

Stored in sterilized bottles having a specific voucher number

A pinch of crust were inoculated in the BG-11 medium at 25 ± 10 C and 7.5 W/m2 light intensity up to 60 days.

Species was isolated to unialgal culture after repeated culturing

Unialgal cultures were isolated and kept in Visva-Bharati Culture Collection of Algae having a specific strain number e.g VBCCA010123.

Microphotography diagrams were prepared.

Identification was done following the monographs of Desikachary (1959), Komarek &

Anagnostidis (1989) , Anagnostidis & Komarek (1990) and Rippika et al. (1979)

45 isolates of algae were isolated and deposited in VBCCA in the current study

e. g ICB.1

Identified following standard monographs

Generation time and physiological characteristics of each species was worked out

Page 9: Sub-aerial algal diversity in the biofilms of terracota …Santiniketan- India jrath@visva-bharati.ac.in Sub-aerial algal diversity in the biofilms of terracota temples of Bishnupur,

Light microscopic photographs of micro algae colonizing on the surface ofterracotta temples of Bishnupur. a. Chroococcus indicus; b, c. Chroococcusminor; d. Chroococcus turgidus var. maximus; e. Chroococcus varius; f.Cyanosarcina burmensis; g. Cyanosarcina parthenonensis ; h, i. Cyanosarcinaspectabilis; j. Aphanothece castagnei ; k. Aphanothece microscopica ; l.Aphanothece pallid; m. Aphanothece stagnina. Scale bar = 10 µm

Light microscopic photographs of micro algae colonizing on the surface ofterracotta temples of Bishnupur. a. Cyanothece aeruginosa; b-d. Gloeothecerupestris; e. Gloeocapsa sanguinea; f. Chroococcidiopsis kashayi; g.Westiellopsis prolifica; h. Nostoc linckia; i. Nostoc microscopicum; j. k. Nostocmuscurum; l. Calothrix clavatoides; m. Calothrix marchica; n.Scytonema bohneri. Scale bar a- f, h-m = 10 µm ; g, n = 50 µm

Page 10: Sub-aerial algal diversity in the biofilms of terracota …Santiniketan- India jrath@visva-bharati.ac.in Sub-aerial algal diversity in the biofilms of terracota temples of Bishnupur,

Light microscopic photographs of micro algae colonizing on the surface ofterracotta temples of Bishnupur. a. Scytonema geitleri; b.Scytonema multiramosum; c. Scytonema rivulare; d. Scytonema schmidtii; e,f. Stigonema tomentosum; g. Lyngbya arboricola; h. Lyngbya major; i.Lyngbya palmarum; j. Phormidium aerugineo-coeruleum; k,l. Phormidiumambiguum; m. Phormidium retzii; n. Leptolyngbya boryana; o. Leptolyngbyapolysiphoniae. Scale bar a-c, g-j, l-o = 10 µm; d- f, k = 50 µm

Light microscopic photographs of micro algae colonizing on thesurface of terracotta temples of Bishnupur. a. Synechococcusaeruginosus; b. Bracteacoccus minor; c. Chlorococcum infusionumd. Radiococcus nimbatus e. Printzina effuse; f, g. Trentepohliaaurea; h, i. Gomphonema lanceolatum; j. Navicula gracilis k. l.Nitzschia amphibia; m. Nitzschia palea. Scale bar = 10 µm

Page 11: Sub-aerial algal diversity in the biofilms of terracota …Santiniketan- India jrath@visva-bharati.ac.in Sub-aerial algal diversity in the biofilms of terracota temples of Bishnupur,
Page 12: Sub-aerial algal diversity in the biofilms of terracota …Santiniketan- India jrath@visva-bharati.ac.in Sub-aerial algal diversity in the biofilms of terracota temples of Bishnupur,

VISVA-BHARATI CULTURE COLLECTION OF ALGAE (VBCCA, WDCM-931)

Affiliated to

World Federation for culture collection

Director: Prof. Samit RayCurator: Dr. Jnanendra Rath Contact: [email protected]

Page 13: Sub-aerial algal diversity in the biofilms of terracota …Santiniketan- India jrath@visva-bharati.ac.in Sub-aerial algal diversity in the biofilms of terracota temples of Bishnupur,

In India 20 culture collections are

registered with WFCC and VBCCA is the only one registered culture

collection of Algae from India

Page 14: Sub-aerial algal diversity in the biofilms of terracota …Santiniketan- India jrath@visva-bharati.ac.in Sub-aerial algal diversity in the biofilms of terracota temples of Bishnupur,
Page 15: Sub-aerial algal diversity in the biofilms of terracota …Santiniketan- India jrath@visva-bharati.ac.in Sub-aerial algal diversity in the biofilms of terracota temples of Bishnupur,

Commercially available Sunscreen Products

Ombrelle (with Mexoryl) SPF 30 Lotion by by L'Oreal

Avobenzone

Mexoryl Titanium dioxide

U.S. Food and DrugAdministration hasn'tyet approved it for usein the U.S

•••

•Lakme Skin Brightening Gel

Lakme Sun Expert : Total Sun Control

Tan Protection Index 70 (TPI 70)

Sunscreen Soufflé

Sun Block Sunscreen

Lotion

Page 16: Sub-aerial algal diversity in the biofilms of terracota …Santiniketan- India jrath@visva-bharati.ac.in Sub-aerial algal diversity in the biofilms of terracota temples of Bishnupur,

40 % of the population is sensitive to it, experiencing red, itchy skin. •

• Avobenzone increases the formation of a particular DNA defect inhuman cells. This defect occurs when two adjacent molecules ofthymine, one of the four bases of DNA, link together chemically toform a dimer, causing skin cancer.

Impact of available sunscreens on Human skin

• Titanium dioxide and zinc oxide oxidize DNA, and it produces free radicals that break DNA strands and suppress the immune system.

• Skins dose absorb these chemicals, since detected in urine sample.

Page 17: Sub-aerial algal diversity in the biofilms of terracota …Santiniketan- India jrath@visva-bharati.ac.in Sub-aerial algal diversity in the biofilms of terracota temples of Bishnupur,

Bio-Protective Sunscreen Lotion

?

Page 18: Sub-aerial algal diversity in the biofilms of terracota …Santiniketan- India jrath@visva-bharati.ac.in Sub-aerial algal diversity in the biofilms of terracota temples of Bishnupur,
Page 19: Sub-aerial algal diversity in the biofilms of terracota …Santiniketan- India jrath@visva-bharati.ac.in Sub-aerial algal diversity in the biofilms of terracota temples of Bishnupur,

Why Lyngbya ?It is having a wide multilayered sheath and having high MAAs content.

Terrestrial cyanobacteria have proven to be the most versatile producesof secondary metabolites.

Lyngbya produces several secondary metabolites including barbamid,Curacin A & B, antillatoxin B and malyngamide H and thus this one strainprovides a treasure trove of biosynthetic machinery to producesecondary metabolites with many unique structural features.

Have high SOD (Antioxidant) activity (80 % SOD scavenging activity)

Though it is difficult to culture terrestrial cyanobacteria, mediacomposition and pure culture of the organism was established in ourlab.Protocol for mass culture of this organism was on the process.

Rich Allophycocyanin content

••

••

Page 20: Sub-aerial algal diversity in the biofilms of terracota …Santiniketan- India jrath@visva-bharati.ac.in Sub-aerial algal diversity in the biofilms of terracota temples of Bishnupur,
Page 21: Sub-aerial algal diversity in the biofilms of terracota …Santiniketan- India jrath@visva-bharati.ac.in Sub-aerial algal diversity in the biofilms of terracota temples of Bishnupur,
Page 22: Sub-aerial algal diversity in the biofilms of terracota …Santiniketan- India jrath@visva-bharati.ac.in Sub-aerial algal diversity in the biofilms of terracota temples of Bishnupur,

Abso

rban

ce

750700 650 550 500 450400 350 300 250

Wavelength (nm)

600

3

4

2

6

3

2

1

6

3

5

45

4

2

5, 6

1

1

(a)

(c)

(b)

Fig. Absorption spectra of methanol extract (90% v/v, 450 C, 1 min) of Lyngbya aestuarii from Chilika lake after

irradiation with UV-B for different durations. 1-0 h (Control), 2- 3 h, 3- 6 h, 4- 12 h, 5- 24 h, 6 - 48 h. (a)

Chlorophyll-a, (b) carotenoid, (c) MAAs.

Page 23: Sub-aerial algal diversity in the biofilms of terracota …Santiniketan- India jrath@visva-bharati.ac.in Sub-aerial algal diversity in the biofilms of terracota temples of Bishnupur,

UV-protecting Pigments

Scytonemin is a yellowish brown, lipid soluble dimeric pigment located in the extracellular polysaccharide sheath having molecular weight of 546 and a structure based on indolic and phenolic subunits. It has an absorption maximum at 386 nm.

Mycosporine amino acid like

substances (MAAs) are watersoluble

substances Characterized by a

cyclohexenone on cyclohexenimine

chromophore conjugated with the

nitrogen substituent of an amino acid

on its imino alcohol having absorption

maxima ranging from 310 to 360 nm

and an average molecular weight of

300.

Mycosporine glycine 310Palythine 320Asterina-330 330Palythinol 332Porphyra-334 334Shinorine 334Palythene 360

Page 24: Sub-aerial algal diversity in the biofilms of terracota …Santiniketan- India jrath@visva-bharati.ac.in Sub-aerial algal diversity in the biofilms of terracota temples of Bishnupur,

Fig. 3: Absorption spectra of

methanolic extract (90% (v/v)

450 C, 1 h) of a. different

Isolates of Nostoc commune,

b. different isolates of Nostoc

Sp. , Calothrix sp. and

Fischerella sp. c. different

isolates of Tolypothrix sp.

Page 25: Sub-aerial algal diversity in the biofilms of terracota …Santiniketan- India jrath@visva-bharati.ac.in Sub-aerial algal diversity in the biofilms of terracota temples of Bishnupur,

Fig. 3: Absorption spectra of

methanolic extract (20% (v/v)

450 C, 1 h) of a. different

isolates of Nostoc commune, b.

different isolates of Nostoc sp.

, Calothrix sp. and Fischerella

sp. c. different isolates of

Tolypothrix sp.

Page 26: Sub-aerial algal diversity in the biofilms of terracota …Santiniketan- India jrath@visva-bharati.ac.in Sub-aerial algal diversity in the biofilms of terracota temples of Bishnupur,

332 nm

266 nm

Funding CSIR (2010-2-13): Prospecting Chemical components from Cyanobacteria to Deal with UVRadiation Hazards

Page 27: Sub-aerial algal diversity in the biofilms of terracota …Santiniketan- India jrath@visva-bharati.ac.in Sub-aerial algal diversity in the biofilms of terracota temples of Bishnupur,

ExopolysaccharidesOf terrestrial Cyanobacteria of Bishnupur Terracota temples

Ethanol production

Page 28: Sub-aerial algal diversity in the biofilms of terracota …Santiniketan- India jrath@visva-bharati.ac.in Sub-aerial algal diversity in the biofilms of terracota temples of Bishnupur,
Page 29: Sub-aerial algal diversity in the biofilms of terracota …Santiniketan- India jrath@visva-bharati.ac.in Sub-aerial algal diversity in the biofilms of terracota temples of Bishnupur,

Released exopolysaccharides in the medium

Page 30: Sub-aerial algal diversity in the biofilms of terracota …Santiniketan- India jrath@visva-bharati.ac.in Sub-aerial algal diversity in the biofilms of terracota temples of Bishnupur,

With response to UV-radiation Lyngbya produced thick sheath layerwhich composed of simple sugars released to the medium, which isthe very inexpensive source to use for ethanol and other designerfuels.

Glucose, and sucrose can be continually harvested without harmingor destroying the cyanobacteria (harvesting cellulose and sugarsfrom true algae or crops, like corn and sugarcane, requires killing theorganisms and using enzymes and mechanical methods to extractthe sugars).

Lyngbya produce a relatively pure, gel-like form ofexopolysaccharides that can be broken down easily into glucose

The huge expense in making cellulosic ethanol and biofuels is inusing enzymes and mechanical methods to break cellulose down, soUsing the cyanobacteria escapes these expensive processes

Exopolysaccharides: Ethanol products:

Page 31: Sub-aerial algal diversity in the biofilms of terracota …Santiniketan- India jrath@visva-bharati.ac.in Sub-aerial algal diversity in the biofilms of terracota temples of Bishnupur,

Professor R. Malcolm Brown Jr. and Dr. David Nobles at theUniversity of Texas at Austin, developed a geneticallyengineer cyanobacteria which produce more carbohydrate.

Page 32: Sub-aerial algal diversity in the biofilms of terracota …Santiniketan- India jrath@visva-bharati.ac.in Sub-aerial algal diversity in the biofilms of terracota temples of Bishnupur,

Gloeothece sp.

Nostoc sp.

Page 33: Sub-aerial algal diversity in the biofilms of terracota …Santiniketan- India jrath@visva-bharati.ac.in Sub-aerial algal diversity in the biofilms of terracota temples of Bishnupur,

Sheath

(thin layer surrounding cells or cell groups)

Chroococcus sp.

Phormidium sp.

Gloeothece

membranacea

Scytonema sp.

Page 34: Sub-aerial algal diversity in the biofilms of terracota …Santiniketan- India jrath@visva-bharati.ac.in Sub-aerial algal diversity in the biofilms of terracota temples of Bishnupur,

Capsule

(thick and slimy layer, intimately associated with cell surface)

Cyanothece sp. Nostoc sp.

Cyanospira capsulata

Page 35: Sub-aerial algal diversity in the biofilms of terracota …Santiniketan- India jrath@visva-bharati.ac.in Sub-aerial algal diversity in the biofilms of terracota temples of Bishnupur,

Slime

(mucilaginous material dispersed around the organism)

Cyanothece VBCCA 1008Nostoc VBCCA 1036

Nostoc VBCCA 10103

Page 36: Sub-aerial algal diversity in the biofilms of terracota …Santiniketan- India jrath@visva-bharati.ac.in Sub-aerial algal diversity in the biofilms of terracota temples of Bishnupur,

Released polysaccharide (RPS)

(water-soluble polysaccharide, released into the culture medium)

3 days old colture 20 days old coltureCyanospira capsulata

0 5 10 15 20 25 30 350.0

0.5

1.0

1.5

2.0

2.5Sol. carb.

Viscosity

0

50

100

150

200

250

300

350

400

Time (days)

So

lub

le c

arb

oh

yd

rate

s

(g L

-1)

Vis

co

sity

(mP

a . s

)

Page 37: Sub-aerial algal diversity in the biofilms of terracota …Santiniketan- India jrath@visva-bharati.ac.in Sub-aerial algal diversity in the biofilms of terracota temples of Bishnupur,

Selection of EPS-producing cyanobacteria for Cu removal

0 10 20 30 40 500.00

0.25

0.50

0.75

1.00

Cyanothece CE 4

Cyanothece 16Som2

Cyanothece VI 22

Cyanothece PE 14

C. capsulata

Nostoc PCC 8109

Nostoc PCC 7807

Time (h)

Cu

2+ r

em

oved

(m

g)

Funding: University Grant Commission, New Delhi, India (2009-2012)

Page 38: Sub-aerial algal diversity in the biofilms of terracota …Santiniketan- India jrath@visva-bharati.ac.in Sub-aerial algal diversity in the biofilms of terracota temples of Bishnupur,

Assessment of bioerosion of exposed surfaces of monuments and hypogea and development of preventive strategies for their

conservation

INDO-ITALIAN POC, CHCRT-1

Indian group:

Italian group:

Prof. S.P. Adhikary

Dr. J. Rath

Mr. M. Jena, SRF

Utkal University, Bhubaneswar

Prof. Roberto De Philippis (PI)

Univ. of FlorenceProf. Patrizia Albertano

Univ. of Rome

Prof. Clara Urzi

Univ. of Messina

Indian group:

Page 39: Sub-aerial algal diversity in the biofilms of terracota …Santiniketan- India jrath@visva-bharati.ac.in Sub-aerial algal diversity in the biofilms of terracota temples of Bishnupur,

The Cyanobacterial Desiccome: Structural and Molecular Basis of Anhydrobiosis

• Dying without dying is a remarkable ability, called anhydrobiosis (lifewithout water) is a characteristic feature of many cyanobacteria.

• In desiccation susceptible systems the complete water removalcauses irreversible damage to cells where in desiccation tolerantones such damages are either prevented or repaired upon wetting.

• The proposal is to dissect out the basis of desiccation tolerance byusing few cyanobacterial anhydrobiotes isolated from Indianenvironments and maintained at our laboratory.

Funding: DST, Govt. of India (2010-2013)

Page 40: Sub-aerial algal diversity in the biofilms of terracota …Santiniketan- India jrath@visva-bharati.ac.in Sub-aerial algal diversity in the biofilms of terracota temples of Bishnupur,

UGC DST CSIR