Page 1 Status of HDF-EOS, Related Software, and Tools Abe Taaheri, Raytheon IIS HDF & HDF-EOS Workshop XII October 2008
May 26, 2015
Page 1
Status of HDF-EOS,Related Software, and Tools
Abe Taaheri, Raytheon IIS
HDF & HDF-EOS Workshop XII
October 2008
Page 2
TOOLKIT / HDF-EOS Support
• Maintenance support was funded on EMD Evolution through May 2008
• One year extension until May 2009
• Current support HDF-EOS2 & 5 SDP/MTD Toolkit HDF-EOS plug-in for HDFView HDF-EOS2 to GeoTIFF Converter (HEG) Other Toolkit/HDF-EOS related software Toolkit/HDF-EOS/HEG helpdesk
Page 3
ECS Support of HDF-EOS
• Both HDF4 and HDF5 based flavors of HDF-EOS are part of ECS baseline.
• OS’s: Solaris (9, 10), Irix6.5 (64, n32), Linux (including 64-bit Opteron and Itanium),
Mac OS X (Power PC and Mac Intel), Windows XP(MTD Toolkit, HDF-EOS2 & 5, HEG, HDFView)
(Dropped support for Solaris 8, HP, HP11, Dec, IBM in 2.15 release)
• Planned full Cygwin support for late 2008
• Compilers: Fortran 77/90 & g77/pgf90 , C, C++, gcc, g++,Intel Fortran (SGI Altix), gfortran (Mac Intel)
Page 4
Downloadable Software
• SDP/MTD Toolkit (Science Data Processing Tools)
• HDF-EOS2 (HDF4 based)
• HDF-EOS5 (HDF5 based)
• heconvert (converts HDF4 - based Grid/Point/Swath structures to HDF-EOS 5 equivalents)
Page 5
Downloadable Applications
• HEG
- GeoTIFF conversion
- Spatial subsetting, Field Subsetting
- reprojection
- stitching, sub-sampling and more ….
• HDFView Plug-in, Java-based browser (HDF4, HDF5, HDF-EOS 2 and 5 access)
• HE5View* (HDF5 - based browser)
• EOSView* (HDF4 - based browser)* Dropped support for OS updates on July 2006
Page 6
Software Releases
Toolkit/HDF-EOS:
• Last release – March 2008– TOOLKIT 5.2.15 – HDF-EOS 2.15, HDF- EOS5.1.11
with HDF4.2r3, HDF5-1.6.7, Szip2.1
• Next release – March 2009– TOOLKIT 5.2.16 – HDF-EOS 2.16, HDF-EOS5.1.12
with new releases of HDF4, 5 (possibly 1.8.X)
Page 7
Software Releases (Cont.)
HEG (HDF-EOS2 to GeoTIFF Converter):
• Last release – August 2008
– Version 2.9
• Next release – May 2009
– Version 2.10
Page 8
Software Releases (Cont.)
HDF-EOS Plug-in for HDFView:
• Last release – September 2008
– Version 2.4
• Next release –
– For HDFView Version 2.5
Page 9
Software Releases (Cont.)
HECONVERT (HDF-EOS2 to HDF-EOS5 Converter):
• Last release – 2001, 2004
– Version ?
• Next release – Dec. 2008
– Version ?
Page 10
SDP Toolkit
• Science Data Production (SDP) Toolkit :collection of tools used by
- Science software developers who producecode to process instrument data.
- HDF-EOS users who need to• Access metadata in HDF-EOS files• Perform Time/Date conversion• Access Digital Elevation Model Data• Access Ancillary Data, such as Digital
Chartof the World database (DCW), Olson World Ecosystem files, DEM data files, etc.
Page 11
SDP Toolkit (cont.)
• Tools provided in (SDP, MTD) Toolkit:- AA (Ancillary Data Access)- CBP (CELESTIAL Body Position)- CSC(Coordinate System Conversion)- CUC (Constant and Unit Conversions)- DEM (Digital Elevation Model Access)- EPH (Ephemeris Data Access)- GCT (Geo Coordinate Transformation)- IO (Input Output (File I/O))- MEM (Memory Management)- MET (Metadata Access)- PC (Process Control)- SMF (Status Message File (Error/Status))- TD (Time and Date Conversion)
Page 12
What is HDF-EOS ?
• HDF-EOS is an extension to HDF which standardizes storage of and access to common Earth Sciences data structures
– By providing a single interface to data structures common to earth science
– By providing a container for EOS inventory, archive and product specific metadata
– By establishing a consistent relationship between geolocation and science data.
Page 13
HDF-EOS 2
• HDF4 - based, storage format for EOS standard products.
• Used operationally by MODIS, MISR, ASTER, Landsat, AIRS and other EOS instruments
• Support for Grid/Point/Swath structures
• HDF4 and HDF-EOS 2 will be supported by THG/NASA for the fore-seeable future.
Page 14
HDF-EOS 5
• Based on HDF5, a complete rewrite of HDF-EOS2 with a different user interface.
– First released in 2000.
– Format used by EOS Aura instruments
• Designed to ‘resemble’ HDF-EOS 2 to the maximum extent possible.
– Supports same data structures
– Added prefix ‘HE5_’ to HDF-EOS 2 functions.
Page 15
HDFView
• HDFView: A Java-based browser from THG for HDF4 and HDF5 – based data.
• HDF-EOS plug-in extends HDFView to browse HDF-EOS data in both versions.
• The extension is a plug-in module and does not change THG HDFView functionality. All copy, save, editing, image display, etc. for HDF4 and 5 objects remains.
• Identical look and feel when displaying HDF and HDF-EOS objects.
• Users can access a complete breakdown of HDF-EOS objects. e.g. grid information, projection info., dimensions, datafields, and attributes are displayed.
• Current Support: SUN, SGI, LINUX, Mac, WINDOWS platforms
Page 16
Swath, Grid, and Point Objects
Page 17
AMSR-E and OMI Point objects
Page 18
AMSR-E Swath
New Features in Release Version 2.4
Page 19
HE2 To HE5 Conversion
New Features in Release Version 2.4
Page 20
HEG: Utility that converts EOSDIS data from HDF-EOS format to common Geographical Information System (GIS)-compatible formats.
• Versions Available:– Stand-alone: A downloadable desktop version – Data Pool: Access through NASA archive online storage
– Implemented also in prototypes for Stand-alone Data Pool, OGC (Open Geospatial Consortium) for Web Services Chaining, and DOWS (Deploy OGC Web Services) on the DAACs
HDF-EOS to GeoTIFF Converter (HEG)
Page 21
HEG Functionality
• Conversion:–HDF-EOS (Swath or Grid ) to a single-band or multi-
band GeoTIFF’s–HDF-EOS Swath to HDF-EOS Grid or Swath–HDF-EOS Swath or Grid to generic Binary (with
metadata file)• Subsetting (spatial, field, band)• Stitching (mosaicing) + subsetting + Reprojecting• Reprojection ( to UTM, PS, TM, STP, LCC, LAMAZ, GEO, SIN,
Albers)• Subsampling (Subsample stacks)
• Running from Command Line (batch jobs) or with Java-based GUI
Page 22
HEG Functionality
• Metadata preservation/creation.
• Currently supports MODIS, MISR, ASTER, AIRS and AMSR-E products on TERRA and AQUA (>115 products),
• Allows file selection from users local storage
• Operable on Sun, SGI, Win, Linux, MAC
• Integrated into ECS Data Pool– Reduces the transfer time of HDF-EOS data sets (if subset is requested)
– Provides the end-user with the exact file required by their application
• User Interface– Portable, written in Java.
– Not dependent on COTS (eg. IDL).
Page 23
Mt. Etna Eruption: MISR L1B Stitched Blocks
Page 24
2004 Hurricane Francis, MODIS
MOD021KM, Multi-Band GeoTIFF, 3 bands: EV_1KM_RefSB, Bands 1,2,5
Page 25
AST_L1B, 2003 California FiresGeo. projection, Multi-Band GeoTIFF,
(3 bands: Visible Near Infrared (VNIR))
Two Swaths Stitched …..
….. and Subsetted
Page 26
TOOLKIT/HDF-EOS:
SZIP Insatallation: Default decoder,
Choice for encoder
Choice for configuring HDF4 with/without SZIP
Choice for disabling HDF4’s internal netCDF
Choice for installing Toolkit/HDF-EOS in 32 or 64-bit modes in 64-bit Linux platforms
(except for Itanium; no –m32 flag)
Major Development/FixesLast Releases
Page 27
Support for new releases of HDF4/HDF5/SZIP
(HDF4.2r3, HDF5-1.6.7, SZIP-2.1)
Installation fix for a problem caused by limits.h
in some Linux platforms
Auto Configuration capability (like HDF) added
for both HDF-EOS2 and HDF-EOS5
Major Development/Fixes (cont.)
Page 28
Support for Mac Intel platform. Drop of support for Sun5.8, Dec, HP, HP 11, IBM
Fixes for Lat/Lon to pixel conversions in DEM tools for Linux to get results similar to those in Unix platforms Add GDij2ll and GDll2ij APIs to HDF-EOS and HDF-EOS5
Modified accuracy check for quaternion in CSC tools
Major Development/Fixes (cont.)
Page 29
HDFEOSVersion string clean up in HDF-EOS5
Added new utilities to dump lat/lon arrays for grids in HDF-EOS and HDF-EOS5
Fixed several other bugs for Grid. Swath and Point objects (complete list in release notes)
Major Development/Fixes (cont.)
Page 30
Major Development/Fixes (cont.)
HDF-EOS Plug-in for HDFView:
Current Support: SUN, LINUX, WINDOWS, and MAC (Power and Intel)
– Auto installation of plug-in into HDFView running self-extracting archives.
– Adding to plug-in the fixes and enhancement that went into HDFView2.4
– Display image for selected pixels in the viewed tables
Page 31
Major Development/Fixes (cont.)
– Display Lat/Lon for a selected pixel in the
data field tables
– Full Mac OSX support
– Improved Help Window
– New icons for activating Lat/Lon display for
Swath & Grid
– Format conversion: HDF-EOS2 -> HDF-EOS5
Page 32
Major Development/Fixes (cont.)
HEG: Release Spatial subsetting:
- AE-DyOcn, AE_DySno• New Product: AMSR-E and ASTER (On-Demand L2)
- AMSR-E 5 day Snow- AMSR-E Monthly Snow- AMSR-E Weekly Ocean- AMSR-E Monthly Ocean- AMSR-E Daily 12 Km Sea Ice- AMSR-E Daily 6 Km Sea Ice- AMSR-E L2 Rain, AMSR-E Rain Grid- ASTR_07XT, ASTR_09XT
Page 33
Major Development/Fixes (cont.)
• Stitching:
− MOD14A1 3-D fields (band selection)
− TM grids
• Multi-band geotif/HDF-EOS in Datapool
• Other Fixes:
− Interpolation correction with AIRS products
containing fillvalue in the data fields
− Pixel size unit consistency in conversion and stitch GUIs.
Page 34
Major Development/Fixes (cont.)
− Correction for droping a column when
stitching MODIS SIN tiles.
− Correction to ignoring of Geographic pixel size
and processing with default pixel size
− Spatial subsetting fix for global AMSR-E garanules
− Correction for ignoring re-projection interpolation type NN after stitching
Page 35
Future Plans
TOOLKIT/HDF-EOS:• Auto Configuration for TOOLKIT
• Full Support for Cygwin platform
• Support for HDF5-1.8
• Validation tool for HDF-EOS5 files
• Performance improvement
– reading HDF format eph/att files in Toolkit
– HDF-EOS5 by redesigning some functions
Page 36
Future Plans (cont.)
HDF-EOS Plug-in for HDFView:• More functionalities :
- Ability to modify input HDF-EOS2 granules.
- Ability to cut/paste objects, modify/delete attributes.
- Ability to create new grid/swath
HEG:- Support for AMSR-E Level 3 Land (CEA projection)
- New MRT (MODIS Reprojection Tool) release updates
Page 37
Availability
• Access to libraries, applications, Documentation:
TOOLKITTOOLKIT:: http://newsroom.gsfc.nasa.gov/sdptoolkit/toolkit.htmlhttp://newsroom.gsfc.nasa.gov/sdptoolkit/toolkit.html
HDFViewHDFView::http://newsroom.gsfc.nasa.gov/sdptoolkit/HDFView/http://newsroom.gsfc.nasa.gov/sdptoolkit/HDFView/
HDFView_hdfeos_plugin.htmlHDFView_hdfeos_plugin.html
HEGHEG: : http://newsroom.gsfc.nasa.gov/sdptoolkit/HEG/HEGHome.htmlhttp://newsroom.gsfc.nasa.gov/sdptoolkit/HEG/HEGHome.html
• Email–[email protected]–[email protected]