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Signals in frog embryos How can we identify developmental signaling pathways? How do other vertebrate embryos develop?
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Signals in frog embryos How can we identify developmental signaling pathways? How do other vertebrate embryos develop?

Dec 18, 2015

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Page 1: Signals in frog embryos How can we identify developmental signaling pathways? How do other vertebrate embryos develop?

Signals in frog embryos

How can we identify developmental signaling pathways?

How do other vertebrate embryos develop?

Page 2: Signals in frog embryos How can we identify developmental signaling pathways? How do other vertebrate embryos develop?

Developmental biology jargon

Cell fate – the normal future identity of a cell (muscle, skin, etc.). A fate map represents future cell fates.

Specification – the process by which a cell acquires a particular fate. Specified cells could still switch to some other fate in response to extracellular signals. A specification map represents the identities that cells have acquired at a particular stage.

Determination – the process by which cells fix their fate stably. Determined cells do not change fate even if they receive new signals.

Differentiation – the process by which cells actually change to take on a particular identity (e.g. express muscle-specific genes).

Page 3: Signals in frog embryos How can we identify developmental signaling pathways? How do other vertebrate embryos develop?

~64-cell stage late blastula gastrulation

Mesoderm induction and patterning

Page 4: Signals in frog embryos How can we identify developmental signaling pathways? How do other vertebrate embryos develop?

What experimental results demonstrate that a particular signal induces a response?

Page 5: Signals in frog embryos How can we identify developmental signaling pathways? How do other vertebrate embryos develop?

What experimental results demonstrate that a particular signal induces a response?

Location – The signal must be present in the right place and at the right time.

Sufficiency – The signal must be able to induce the response (perhaps outside normal context).

Necessity – When the signal is removed or blocked, the response is also blocked.

Page 6: Signals in frog embryos How can we identify developmental signaling pathways? How do other vertebrate embryos develop?

Using these logical criteria to discover and test signals that might regulate a response.

Location – Find molecules that are present in the right place and at the right time.

Separate mRNA or proteins from different places, look for differences.

Sufficiency – Identify potential signaling molecules that can induce the response (perhaps outside its normal context).

Inject mRNAs or proteins corresponding to putative signals. Use gain-of-function mutations or transgenes.

Necessity – Remove or block the signal, test whether the response still occurs or not.

Loss-of-function mutationsInhibitors of particular pathwaysRNA interference

Page 7: Signals in frog embryos How can we identify developmental signaling pathways? How do other vertebrate embryos develop?

~64-cell stage late blastula gastrulation

Mesoderm induction and patterning

Page 8: Signals in frog embryos How can we identify developmental signaling pathways? How do other vertebrate embryos develop?

Vg1 mRNA

Page 9: Signals in frog embryos How can we identify developmental signaling pathways? How do other vertebrate embryos develop?

TGF- receptors activate gene regulatory proteins at the membrane

The TGF- family includesVg1, nodal, Xnr, activin, BMPs.

Some of these are localized to the vegetal region.

Page 10: Signals in frog embryos How can we identify developmental signaling pathways? How do other vertebrate embryos develop?

The TGF- family includesVg1, nodal, Xnr, activin, BMPs.

Some of these are localized to the vegetal region.

Maternal VegT (transcription factor, vegetally localized) activates zygotic Xnr (Xenopus Nodal-related) genes on vegetal side.

(VegT also specifies endoderm.)

Page 11: Signals in frog embryos How can we identify developmental signaling pathways? How do other vertebrate embryos develop?

Activin can induce different mesodermal cell types at different concentrations

Page 12: Signals in frog embryos How can we identify developmental signaling pathways? How do other vertebrate embryos develop?

Activin can induce different genes at different concentrations

General mesoderm

Dorsal mesoderm (organizer)

Page 13: Signals in frog embryos How can we identify developmental signaling pathways? How do other vertebrate embryos develop?
Page 14: Signals in frog embryos How can we identify developmental signaling pathways? How do other vertebrate embryos develop?

TGF- receptors activate gene regulatory proteins at the membrane

The TGF- family includesVg1, nodal, Xnr, activin, BMPs.

Some of these are localized to the vegetal region.

Page 15: Signals in frog embryos How can we identify developmental signaling pathways? How do other vertebrate embryos develop?

Dominant negative activin receptor

Page 16: Signals in frog embryos How can we identify developmental signaling pathways? How do other vertebrate embryos develop?

Another important pathway in inducing dorsal mesoderm-catenin immunolocalizations:

dorsal side ventral side

-catenin is a transcription factor

Page 17: Signals in frog embryos How can we identify developmental signaling pathways? How do other vertebrate embryos develop?

Wnt signaling pathway

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Page 18: Signals in frog embryos How can we identify developmental signaling pathways? How do other vertebrate embryos develop?

Inject dominant-negative GSK3 protein at 2-cell stage

Page 19: Signals in frog embryos How can we identify developmental signaling pathways? How do other vertebrate embryos develop?

Current model of frog mesoderm induction

(=Xnr)

Page 20: Signals in frog embryos How can we identify developmental signaling pathways? How do other vertebrate embryos develop?

~64-cell stage late blastula gastrulation

Mesoderm induction and patterning

Page 21: Signals in frog embryos How can we identify developmental signaling pathways? How do other vertebrate embryos develop?

noggin expression in blastula

Dorsal side

Page 22: Signals in frog embryos How can we identify developmental signaling pathways? How do other vertebrate embryos develop?

Noggin protein injection rescues UV-irradiated embryos

[noggin]

none

low

high

medium

very high

Page 23: Signals in frog embryos How can we identify developmental signaling pathways? How do other vertebrate embryos develop?

noggin expression in dorsal mesoderm

(also acts at later stages after gastrulation has begun)

Page 24: Signals in frog embryos How can we identify developmental signaling pathways? How do other vertebrate embryos develop?

Model for mesoderm patterning

Antagonize BMP-4

Antagonizes Xwnt-8

Page 25: Signals in frog embryos How can we identify developmental signaling pathways? How do other vertebrate embryos develop?

TGF- receptors activate gene regulatory proteins at the membrane

The TGF- family includesVg1, nodal, Xnr, activin, BMPs.

BMP4 acts in ventral mesoderm.

Page 26: Signals in frog embryos How can we identify developmental signaling pathways? How do other vertebrate embryos develop?

~64-cell stage late blastula gastrulation

Mesoderm identities

Page 27: Signals in frog embryos How can we identify developmental signaling pathways? How do other vertebrate embryos develop?

Brachyury expression in blastula

Page 28: Signals in frog embryos How can we identify developmental signaling pathways? How do other vertebrate embryos develop?

Maternal patterning signals set up zygotic gene expression

Brachyury and Goosecoid are transcription factors

Page 29: Signals in frog embryos How can we identify developmental signaling pathways? How do other vertebrate embryos develop?

Activin can induce different genes at different concentrations

General mesoderm

Dorsal mesoderm (organizer)

Page 30: Signals in frog embryos How can we identify developmental signaling pathways? How do other vertebrate embryos develop?

Injection of goosecoid mRNA into ventral vegetal cells of 16-cell embryo

Control embryos (not injected)

Page 31: Signals in frog embryos How can we identify developmental signaling pathways? How do other vertebrate embryos develop?

How do other embryos develop?

Page 32: Signals in frog embryos How can we identify developmental signaling pathways? How do other vertebrate embryos develop?

Chick gastrulation:the squashed frog model

Page 33: Signals in frog embryos How can we identify developmental signaling pathways? How do other vertebrate embryos develop?
Page 34: Signals in frog embryos How can we identify developmental signaling pathways? How do other vertebrate embryos develop?
Page 35: Signals in frog embryos How can we identify developmental signaling pathways? How do other vertebrate embryos develop?
Page 36: Signals in frog embryos How can we identify developmental signaling pathways? How do other vertebrate embryos develop?

Chick gastrulation (equivalent to organizer in frogs)

Page 37: Signals in frog embryos How can we identify developmental signaling pathways? How do other vertebrate embryos develop?
Page 38: Signals in frog embryos How can we identify developmental signaling pathways? How do other vertebrate embryos develop?
Page 39: Signals in frog embryos How can we identify developmental signaling pathways? How do other vertebrate embryos develop?
Page 40: Signals in frog embryos How can we identify developmental signaling pathways? How do other vertebrate embryos develop?
Page 41: Signals in frog embryos How can we identify developmental signaling pathways? How do other vertebrate embryos develop?
Page 42: Signals in frog embryos How can we identify developmental signaling pathways? How do other vertebrate embryos develop?
Page 43: Signals in frog embryos How can we identify developmental signaling pathways? How do other vertebrate embryos develop?