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Sampling Transitional Waters for the Water Framework Directive, 2007 - 2009 A summary of the first three year Water Framework Directive fish surveillance monitoring cycle Fiona Kelly, Andrew Harrison, Lynda Connor, Ronan Matson, Rory Feeney, Emma Morrissey, Ciara Wogerbauer and Kieran Rocks (Roisin O’Callaghan, Grainne Hanna, Trevor Stafford, Brian Hayden, Glen Wightman, Mo Lordan, Trevor Champ) Plus MANY staff from the 7 Regional Fisheries Boards Inland Fisheries Ireland
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Sampling Transitional Waters for the Water Framework ...Sampling Transitional Waters for the Water Framework Directive, 2007 - 2009 A summary of the first three year Water Framework

Mar 25, 2020

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Page 1: Sampling Transitional Waters for the Water Framework ...Sampling Transitional Waters for the Water Framework Directive, 2007 - 2009 A summary of the first three year Water Framework

Sampling Transitional Waters for the Water Framework Directive, 2007 - 2009

A summary of the first three year Water Framework Directive fish surveillance monitoring cycle

Fiona Kelly, Andrew Harrison, Lynda Connor, Ronan Matson, Rory Feeney, Emma Morrissey, Ciara Wogerbauer and Kieran Rocks (Roisin O’Callaghan, Grainne Hanna, Trevor Stafford, Brian Hayden, Glen Wightman, Mo Lordan, Trevor Champ)

Plus MANY staff from the 7 Regional Fisheries Boards

Inland Fisheries Ireland

Page 2: Sampling Transitional Waters for the Water Framework ...Sampling Transitional Waters for the Water Framework Directive, 2007 - 2009 A summary of the first three year Water Framework

WFD fish monitoring, 2007 - 2009

Overview

• Presentation duration of 20 minutes

• Water Framework Directive transitional waters survey methods

• Key findings from the 2007 – 2009 transitional waters surveys

• Classification tool development

• Questions???

Page 3: Sampling Transitional Waters for the Water Framework ...Sampling Transitional Waters for the Water Framework Directive, 2007 - 2009 A summary of the first three year Water Framework

WFD transitional waters, 2007 - 2009

• Interface habitats

• Tidal influence

Page 4: Sampling Transitional Waters for the Water Framework ...Sampling Transitional Waters for the Water Framework Directive, 2007 - 2009 A summary of the first three year Water Framework

WFD transitional waters, 2007 - 2009

Page 5: Sampling Transitional Waters for the Water Framework ...Sampling Transitional Waters for the Water Framework Directive, 2007 - 2009 A summary of the first three year Water Framework

WFD transitional waters, 2007 - 2009

Page 6: Sampling Transitional Waters for the Water Framework ...Sampling Transitional Waters for the Water Framework Directive, 2007 - 2009 A summary of the first three year Water Framework

WFD transitional waters, 2007 - 2009

Page 7: Sampling Transitional Waters for the Water Framework ...Sampling Transitional Waters for the Water Framework Directive, 2007 - 2009 A summary of the first three year Water Framework

WFD fish monitoring transitional water bodies, 2007 - 2009

IFI completed surveys

2007 – 8 water bodies

2008 – 41 water bodies

2009 – 23 water bodies

Total – 72 water bodies

Page 8: Sampling Transitional Waters for the Water Framework ...Sampling Transitional Waters for the Water Framework Directive, 2007 - 2009 A summary of the first three year Water Framework

Survey methods – Transitional Waters

Multi-method

Combination of beach seining, fyke netting and beam trawling

Page 9: Sampling Transitional Waters for the Water Framework ...Sampling Transitional Waters for the Water Framework Directive, 2007 - 2009 A summary of the first three year Water Framework

Survey methods – Transitional Waters

Beach seining

• 30 m fine-mesh net

• All tidal stages depending on accessibility

• A range of shoreline slopes & substrates

• Team of 4 people

Page 10: Sampling Transitional Waters for the Water Framework ...Sampling Transitional Waters for the Water Framework Directive, 2007 - 2009 A summary of the first three year Water Framework

Survey methods – Transitional Waters

Fyke netting

• Set in trains of 3 fykes

• Left overnight for full tide cycle

• Team of 2 to set fykes, 3 to lift fykes

Page 11: Sampling Transitional Waters for the Water Framework ...Sampling Transitional Waters for the Water Framework Directive, 2007 - 2009 A summary of the first three year Water Framework

Survey methods – Transitional Waters

Beam trawling

• Metal bar holds open net

• Towed slowly along the seabed

• Trawls usually over length of 200 m

• Team of 2 people

Page 12: Sampling Transitional Waters for the Water Framework ...Sampling Transitional Waters for the Water Framework Directive, 2007 - 2009 A summary of the first three year Water Framework

• Surveys usually conducted in September & October

• Species composition & relative abundance, indicator species

Survey methods – Transitional Waters

• Data supports other projects, e.g. National Eel Management Plan

Page 13: Sampling Transitional Waters for the Water Framework ...Sampling Transitional Waters for the Water Framework Directive, 2007 - 2009 A summary of the first three year Water Framework

Scale of transitional waters

Lower Shannon = 123 km2 Bridge Lough = 0.08 km2

Survey methods – Transitional Waters

• 6 days

• 6 staff

• 2 days

• 4 staff

Page 14: Sampling Transitional Waters for the Water Framework ...Sampling Transitional Waters for the Water Framework Directive, 2007 - 2009 A summary of the first three year Water Framework

Scale of transitional waters

Survey methods – Transitional Waters

Lower Shannon = 123 km2 Bridge Lough = 0.08 km2

• 6 days

• 6 staff

• 2 days

• 4 staff

Page 15: Sampling Transitional Waters for the Water Framework ...Sampling Transitional Waters for the Water Framework Directive, 2007 - 2009 A summary of the first three year Water Framework

Survey methods – Transitional Waters

Page 16: Sampling Transitional Waters for the Water Framework ...Sampling Transitional Waters for the Water Framework Directive, 2007 - 2009 A summary of the first three year Water Framework

Transitional water surveys, 2007 - 2009

• Species richness related

to size of water body

• 71 species recorded

• 105,336 individual fish

Lowest

• Murree Lough – 2 species

Highest

• Swilly Estuary – 32 species• Lower Shannon – 31 species

Page 17: Sampling Transitional Waters for the Water Framework ...Sampling Transitional Waters for the Water Framework Directive, 2007 - 2009 A summary of the first three year Water Framework

Transitional water surveys, 2007 - 2009

Flounder

• Most widespread

• 66 water bodies

• Important species for angling

Page 18: Sampling Transitional Waters for the Water Framework ...Sampling Transitional Waters for the Water Framework Directive, 2007 - 2009 A summary of the first three year Water Framework

Transitional water surveys, 2007 - 2009

European eel

• Second most widespread

• 62 water bodies

• Indicator species, declining population

• EC Regulation 1100/2007, CITES

Page 19: Sampling Transitional Waters for the Water Framework ...Sampling Transitional Waters for the Water Framework Directive, 2007 - 2009 A summary of the first three year Water Framework

Transitional water surveys, 2007 - 2009

Smelt

• Example of estuarine fish

• Indicator species

• Threatened in Irish Red Data Book

• Smell of cucumber!

Page 20: Sampling Transitional Waters for the Water Framework ...Sampling Transitional Waters for the Water Framework Directive, 2007 - 2009 A summary of the first three year Water Framework

Transitional water surveys, 2007 - 2009

Thick-lipped grey mullet

• Harbours, estuaries & brackish

waters

• Often big fish, tiny organic particles

• Difficult target for anglers

Page 21: Sampling Transitional Waters for the Water Framework ...Sampling Transitional Waters for the Water Framework Directive, 2007 - 2009 A summary of the first three year Water Framework

Transitional water surveys, 2007 - 2009

Sea bass

• Predator of inshore waters

• Exciting target for anglers

• Protected by Irish law

Page 22: Sampling Transitional Waters for the Water Framework ...Sampling Transitional Waters for the Water Framework Directive, 2007 - 2009 A summary of the first three year Water Framework

Transitional water surveys, 2007 - 2009

Dace

• Non-native invasive in Ireland

• Fast-flowing freshwater

• Found in estuaries of invaded rivers

Page 23: Sampling Transitional Waters for the Water Framework ...Sampling Transitional Waters for the Water Framework Directive, 2007 - 2009 A summary of the first three year Water Framework

Transitional water surveys, 2007 - 2009

Deep-snouted pipefish

• Eel-grass beds

• Also rock pools, over sand, brackish

waters

• Relative seahorses, males incubate

eggs

Page 24: Sampling Transitional Waters for the Water Framework ...Sampling Transitional Waters for the Water Framework Directive, 2007 - 2009 A summary of the first three year Water Framework

Transitional water surveys, 2007 - 2009

Gilthead bream

• Single specimen, Broad Lough

• Mediterranean, Atlantic coasts

• Becoming more established?

Page 25: Sampling Transitional Waters for the Water Framework ...Sampling Transitional Waters for the Water Framework Directive, 2007 - 2009 A summary of the first three year Water Framework

Transitional water surveys, 2007 - 2009

Page 26: Sampling Transitional Waters for the Water Framework ...Sampling Transitional Waters for the Water Framework Directive, 2007 - 2009 A summary of the first three year Water Framework

Transitional Fish Classification Index (TFCI)Summary of development and outputs

Inland Fisheries Ireland – Research and Development Division

Fiona Kelly and Andrew Harrison

Northern Ireland Environment Agency (NIEA)

Peter Moorehead and Trevor Harrison

Environment Agency (England and Wales)

Steve Coates and Adam Waugh

Transitional Waters Classification Tool

Page 27: Sampling Transitional Waters for the Water Framework ...Sampling Transitional Waters for the Water Framework Directive, 2007 - 2009 A summary of the first three year Water Framework

• Introduction to the Transitional Fish Classification Index (TFCI)

• Metrics included in the TFCI

• Ecological status of transitional waters, 2007 - 2009

• Calculation of EQRs for each water body

• Future developments of the TFCI

Transitional Waters Classification Tool

Page 28: Sampling Transitional Waters for the Water Framework ...Sampling Transitional Waters for the Water Framework Directive, 2007 - 2009 A summary of the first three year Water Framework

• The TFCI is a multi-metric index using 10 fish metrics

- Species composition- Abundance- Functional guilds- Indicator species

• Individual metric scores are summed

• Summed scores are converted into an EQR between 0 and 1

TFCI – multimetric index

Page 29: Sampling Transitional Waters for the Water Framework ...Sampling Transitional Waters for the Water Framework Directive, 2007 - 2009 A summary of the first three year Water Framework

Taxa attributes

Metric 1

Metric 2

Metric 8

Metric 7

Metric 3

Metric 4

Metric 5

Metric 6

Multimetricindex/

Ecological quality class

Score

Score

Score

Score

Score

Score

Score

A metric is defined as “a characteristic of the biota that changes in some predictable way with increases in human disturbance”

TFCI – multimetric index

Page 30: Sampling Transitional Waters for the Water Framework ...Sampling Transitional Waters for the Water Framework Directive, 2007 - 2009 A summary of the first three year Water Framework

Species diversity and composition

1) Species composition

2) Presence of indicator species

Species abundance

3) Species relative abundance4) Number of taxa that make up 90% of the abundance

Functional guilds

5) Number of estuarine resident taxa

6) Number of estuarine-dependent marine taxa

7) Functional guild composition8) Number of benthic invertebrate feeding taxa

9) Number of piscivorous taxa

10) Feeding guild composition

TFCI – Metrics

Page 31: Sampling Transitional Waters for the Water Framework ...Sampling Transitional Waters for the Water Framework Directive, 2007 - 2009 A summary of the first three year Water Framework

Metric 1) Species composition

• Measure of amount of similarity between a species assemblage and a reference assemblage

• Response to stress/degradation: Decline

• Presence/absence data

TFCI – Metric 1 – Species composition

Page 32: Sampling Transitional Waters for the Water Framework ...Sampling Transitional Waters for the Water Framework Directive, 2007 - 2009 A summary of the first three year Water Framework

Metric 1) Species composition: Approach

• Develop reference species list

• Assign scores to results (1 – 5)

• Calculate similarity between reference species list and transitional waters (Bray-Curtis)

TFCI – Metric 1 – Species composition

Page 33: Sampling Transitional Waters for the Water Framework ...Sampling Transitional Waters for the Water Framework Directive, 2007 - 2009 A summary of the first three year Water Framework

Metric 1) Species composition: Reference list?

• Least impacted (pristine) systems

• Expert opinion

• Historical data

TFCI – Metric 1 – Species composition

• Survey data

Page 34: Sampling Transitional Waters for the Water Framework ...Sampling Transitional Waters for the Water Framework Directive, 2007 - 2009 A summary of the first three year Water Framework

Metric 1) Species composition: Reference list?

• Determine reference species richness

TFCI – Metric 1 – Species composition

• Select reference taxa

Page 35: Sampling Transitional Waters for the Water Framework ...Sampling Transitional Waters for the Water Framework Directive, 2007 - 2009 A summary of the first three year Water Framework

Metric 1) Species composition: Reference species ri chness

TFCI – Metric 1 – Species composition

• Rank species richness data

0

5

10

15

20

25

30

35

1 5 9 13 17 21 25 29 33 37 41 45 49 53 57 61 65 69

Rank

Ric

hnes

s

• Select upper quintile (80th percentile)

• Calculate the mean richness of the upper quintile

Mean = 22

Page 36: Sampling Transitional Waters for the Water Framework ...Sampling Transitional Waters for the Water Framework Directive, 2007 - 2009 A summary of the first three year Water Framework

Metric 1) Species composition: Reference list?

• Determine reference species richness (22)

TFCI – Metric 1 – Species composition

• Select reference taxa

Page 37: Sampling Transitional Waters for the Water Framework ...Sampling Transitional Waters for the Water Framework Directive, 2007 - 2009 A summary of the first three year Water Framework

Metric 1) Species composition: Reference taxa

TFCI – Metric 1 – Species composition

• Rank the frequency of occurrence of each species

Species Bann-A05Connswater-A05Lagan-A05Newry-A05Roe-A05Bandon EstuaryA06BoyneA06FrequencyPlatichthys flesus 7 23 5 29 548 92 64Pomatoschistus minutus 532 22 4 113 542 181 59Anguilla anguilla 2 5 56Sprattus sprattus sprattus 110 12 76 46Pleuronectes platessa 1 58 17 37Gasterosteus aculeatus aculeatus 1 4 18 34Pollachius pollachius 10 34Ciliata mustela 1 10 19 31Clupea harengus 1 1 1 27Spinachia spinachia 1 1 25 1 27Pomatoschistus microps 15 26Salmo trutta trutta 1 26Chelon labrosus 21 24Ammodytes tobianus 1 22Gadus morhua 2 11 21Myoxocephalus scorpius 7 20Atherina presbyter 19Merlangius merlangus 1 42 5 18Syngnathus rostellatus 2 17Salmo salar 1 2 14Solea solea 14Dicentrarchus labrax 13Symphodus melops 2 7 12Syngnathus acus 2 12Agonus cataphractus 1 11Osmerus eperlanus 1 11Entelurus aequoreus 1 10Gobius niger 72 10

• Select most frequently occurring taxa corresponding to reference species richness

Reference species richness (22)

Reference assemblage

Page 38: Sampling Transitional Waters for the Water Framework ...Sampling Transitional Waters for the Water Framework Directive, 2007 - 2009 A summary of the first three year Water Framework

Metric 1) Species composition: Calculate similarity

• Bray-Curtis similarity (presence/absence)

TFCI – Metric 1 – Species composition

32/21+22

2C/A+ R

22

R

74.4%

BC

21

A

16Shannon

CSystem A

2C/A+R x 100

C = number of common taxaA = number of taxa in system AR = number of reference taxa

Page 39: Sampling Transitional Waters for the Water Framework ...Sampling Transitional Waters for the Water Framework Directive, 2007 - 2009 A summary of the first three year Water Framework

Metric 1) Species composition: Calculate similarity

• Assign scores

TFCI – Metric 1 – Species composition

5>80%

460-80%

340-60%

220-40%

1<20%

ScoreSimilarity

Page 40: Sampling Transitional Waters for the Water Framework ...Sampling Transitional Waters for the Water Framework Directive, 2007 - 2009 A summary of the first three year Water Framework

Species diversity and composition

1) Species composition

2) Presence of indicator species

Species abundance

3) Species relative abundance4) Number of taxa that make up 90% of the abundance

Functional guilds

5) Number of estuarine resident taxa

6) Number of estuarine-dependent marine taxa

7) Functional guild composition8) Number of benthic invertebrate feeding taxa

9) Number of piscivorous taxa

10) Feeding guild composition

TFCI – Metrics

Page 41: Sampling Transitional Waters for the Water Framework ...Sampling Transitional Waters for the Water Framework Directive, 2007 - 2009 A summary of the first three year Water Framework

Metric 2) Indicator species

• Measure of disturbance-sensitive taxa

• Response to stress/degradation: Decline

• Presence/absence data

TFCI – Metric 2 – Indicator species

Page 42: Sampling Transitional Waters for the Water Framework ...Sampling Transitional Waters for the Water Framework Directive, 2007 - 2009 A summary of the first three year Water Framework

Metric 2) Indicator species: Approach

• Develop indicator species list

• Assign scores to results (1 – 5)

• Count number of indicator species present

TFCI – Metric 2 – Indicator species

Page 43: Sampling Transitional Waters for the Water Framework ...Sampling Transitional Waters for the Water Framework Directive, 2007 - 2009 A summary of the first three year Water Framework

Metric 2) Indicator species: Indicator species list

• IUCN Red List of Threatened Species

• OSPAR List of Threatened and/or Declining Species and Habitats

• EU Habitats Directive (Annex II & Annex IV)

TFCI – Metric 2 – Indicator species

• NI Priority Species & Species of Conservation Concern (Convention on Biological Diversity)

• Bern Convention

Page 44: Sampling Transitional Waters for the Water Framework ...Sampling Transitional Waters for the Water Framework Directive, 2007 - 2009 A summary of the first three year Water Framework

Metric 2) Indicator species: Indicator species list (9 species)

TFCI – Metric 2 – Indicator species

Scientific NameAcipenser sturio Alosa alosa Alosa fallax Anguilla anguilla Lampetra fluviatilisOsmerus eperlanus Petromyzon marinus Salmo salar Salmo trutta trutta

Page 45: Sampling Transitional Waters for the Water Framework ...Sampling Transitional Waters for the Water Framework Directive, 2007 - 2009 A summary of the first three year Water Framework

Metric 2) Indicator species

• Assign scores

TFCI – Metric 2 – Indicator species

5>80%

460-80%

340-60%

220-40%

1<20%

Score% Indicator species present

Page 46: Sampling Transitional Waters for the Water Framework ...Sampling Transitional Waters for the Water Framework Directive, 2007 - 2009 A summary of the first three year Water Framework

Species diversity and composition

1) Species composition

2) Presence of indicator species

Species abundance

3) Species relative abundance4) Number of taxa that make up 90% of the abundance

Functional guilds

5) Number of estuarine resident taxa

6) Number of estuarine-dependent marine taxa

7) Functional guild composition8) Number of benthic invertebrate feeding taxa

9) Number of piscivorous taxa

10) Feeding guild composition

TFCI – Metrics

Page 47: Sampling Transitional Waters for the Water Framework ...Sampling Transitional Waters for the Water Framework Directive, 2007 - 2009 A summary of the first three year Water Framework

Metric 5) Number of estuarine resident taxa

• Resident taxa are susceptible to degradation

• Response to stress/degradation: Decline

• Presence/absence data

TFCI – Metric 5 – Estuarine resident taxa

Page 48: Sampling Transitional Waters for the Water Framework ...Sampling Transitional Waters for the Water Framework Directive, 2007 - 2009 A summary of the first three year Water Framework

Metric 5) Number of estuarine resident taxa: Approa ch

• Compare actual richness with reference richness

• Establish estuarine resident reference richness

TFCI – Metric 5 – Estuarine resident taxa

• Assign scores to results (1 – 5)

Page 49: Sampling Transitional Waters for the Water Framework ...Sampling Transitional Waters for the Water Framework Directive, 2007 - 2009 A summary of the first three year Water Framework

Metric 5) Number of estuarine resident taxa

• Assign scores

TFCI – Metric 5 – Estuarine resident taxa

5>80%

460-80%

340-60%

220-40%

1<20%

ScorePercent of reference

Page 50: Sampling Transitional Waters for the Water Framework ...Sampling Transitional Waters for the Water Framework Directive, 2007 - 2009 A summary of the first three year Water Framework

Species diversity and composition

1) Species composition

2) Presence of indicator species

Species abundance

3) Species relative abundance4) Number of taxa that make up 90% of the abundance

Functional guilds

5) Number of estuarine resident taxa

6) Number of estuarine-dependent marine taxa

7) Functional guild composition8) Number of benthic invertebrate feeding taxa

9) Number of piscivorous taxa

10) Feeding guild composition

TFCI – Metrics

Page 51: Sampling Transitional Waters for the Water Framework ...Sampling Transitional Waters for the Water Framework Directive, 2007 - 2009 A summary of the first three year Water Framework

TFCI – EQR calculation

• Sum the metric scores

• TFCI converted to an EQR: (TFCI -10) / (50 -10)

• Scores range from 10 - 50

High>0.8

Good0.6-0.8

Moderate0.4-0.6

Poor0.2-0.4

Bad<0.2

WFD Quality ClassEQR

• Metric score (1 – 5) for each metric

Page 52: Sampling Transitional Waters for the Water Framework ...Sampling Transitional Waters for the Water Framework Directive, 2007 - 2009 A summary of the first three year Water Framework

Ecological classification

Page 53: Sampling Transitional Waters for the Water Framework ...Sampling Transitional Waters for the Water Framework Directive, 2007 - 2009 A summary of the first three year Water Framework

TFCI – Fish versus other BQE and water chemistry

• Durnesh Lough

- High/Good (Water chemistry/Phytoplankton)

- Moderate (Fish)

- 6 species (low numbers)

Page 54: Sampling Transitional Waters for the Water Framework ...Sampling Transitional Waters for the Water Framework Directive, 2007 - 2009 A summary of the first three year Water Framework

TFCI – Fish versus other BQE and water chemistry

• Durnesh Lough

Page 55: Sampling Transitional Waters for the Water Framework ...Sampling Transitional Waters for the Water Framework Directive, 2007 - 2009 A summary of the first three year Water Framework

TFCI – Fish versus other BQE and water chemistry

• Durnesh Lough

Page 56: Sampling Transitional Waters for the Water Framework ...Sampling Transitional Waters for the Water Framework Directive, 2007 - 2009 A summary of the first three year Water Framework

TFCI – Fish versus other BQE and water chemistry

• Durnesh Lough

Page 57: Sampling Transitional Waters for the Water Framework ...Sampling Transitional Waters for the Water Framework Directive, 2007 - 2009 A summary of the first three year Water Framework

TFCI – Future developments

• Define typologies

- Assess whole estuary rather than individual water bodies?

• Fix reference conditions for each typology

• Define typology specific reference conditions

• Confidence of Class

• Intercalibration

Page 58: Sampling Transitional Waters for the Water Framework ...Sampling Transitional Waters for the Water Framework Directive, 2007 - 2009 A summary of the first three year Water Framework

TFCI – Future developments

Thankyou