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RC-LH1 core complex from R. palustris Neil Isaacs Department of Chemistry University of Glasgow
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RC-LH1 core complex from R. palustris Neil Isaacs Department of Chemistry University of Glasgow.

Dec 21, 2015

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Page 1: RC-LH1 core complex from R. palustris Neil Isaacs Department of Chemistry University of Glasgow.

RC-LH1 core complex from R. palustrisNeil Isaacs

Department of Chemistry

University of Glasgow

Page 2: RC-LH1 core complex from R. palustris Neil Isaacs Department of Chemistry University of Glasgow.
Page 3: RC-LH1 core complex from R. palustris Neil Isaacs Department of Chemistry University of Glasgow.

ATP synthase

ATPADP + Pi

H+

H+

H+

H+

LH2 LH1

RC

Light

Cyt c

Q

Q

Q

Q Q

Qe-

e-e-

B800

B850 B880

Cytochrome b/c1

Cytoplasm

Periplasm

QB

Q

Photosynthetic system of purple bacteria

Page 4: RC-LH1 core complex from R. palustris Neil Isaacs Department of Chemistry University of Glasgow.

Peripheral light-harvesting antenna (LH2 complex) from Rh. Acidophila, McDermott et al. (1995) Nature 374, 517.

Page 5: RC-LH1 core complex from R. palustris Neil Isaacs Department of Chemistry University of Glasgow.

Shown above is the structure of RC from Rhodobacter sphaeroides, Allen, et al. (1987) PNAS, 84, 5730; McAuley, et al. (1999) PNAS, 96, 14706.

First structure of reaction centre, from Rhodopseudomonas viridis, was determined by Deisenhofer, et al. (1985) Nature 318, 618.

The Bacterial Reaction Centre

Page 6: RC-LH1 core complex from R. palustris Neil Isaacs Department of Chemistry University of Glasgow.

Cytochrome bc1(Iwata et al (1998) Science, 281, 64—71)

Page 7: RC-LH1 core complex from R. palustris Neil Isaacs Department of Chemistry University of Glasgow.

F1ATPase Abrahams et al, (1994) Nature, 370, 621--8

Page 8: RC-LH1 core complex from R. palustris Neil Isaacs Department of Chemistry University of Glasgow.

ATP synthase

ATPADP + Pi

H+

H+

H+

H+

LH2 LH1

RC

Light

Cyt c

Q

Q

Q

Q Q

Qe-

e-e-

B800

B850 B880

Cytochrome b/c1

Cytoplasm

Periplasm

QB

Q

Page 9: RC-LH1 core complex from R. palustris Neil Isaacs Department of Chemistry University of Glasgow.

Karrasch et al. (1995) EMBO J., 14, 631.

Electron Microscopy 8.5 Å projection map for 2D-crystalof the reconstituted light-harvesting complex I (LH1) fromRhodospirillum rubrum.

Page 10: RC-LH1 core complex from R. palustris Neil Isaacs Department of Chemistry University of Glasgow.

Hypothetical model of the purple bacteria PSU

Papiz MZ, Prince SM, Hawthornthwaite-Lawles AM, McDermott G, Freer AA, Isaacs NW & Cogdell RJ (1996) Trends Plant Sci. 1, 198-206.

LH1

RC

LH2

Page 11: RC-LH1 core complex from R. palustris Neil Isaacs Department of Chemistry University of Glasgow.

Walz, et al. (1998) J. Mol. Biol. 282, 833.

Electron Microscopy 25 Å projections for 2D-crystals of the RC-LH1 complex from Rhodobacter sphaeroides.

Page 12: RC-LH1 core complex from R. palustris Neil Isaacs Department of Chemistry University of Glasgow.
Page 13: RC-LH1 core complex from R. palustris Neil Isaacs Department of Chemistry University of Glasgow.
Page 14: RC-LH1 core complex from R. palustris Neil Isaacs Department of Chemistry University of Glasgow.

Diffraction from crystals of the LH1-RC core complex

Page 15: RC-LH1 core complex from R. palustris Neil Isaacs Department of Chemistry University of Glasgow.
Page 16: RC-LH1 core complex from R. palustris Neil Isaacs Department of Chemistry University of Glasgow.

Current electron density map

Page 17: RC-LH1 core complex from R. palustris Neil Isaacs Department of Chemistry University of Glasgow.
Page 18: RC-LH1 core complex from R. palustris Neil Isaacs Department of Chemistry University of Glasgow.

QB

W

Page 19: RC-LH1 core complex from R. palustris Neil Isaacs Department of Chemistry University of Glasgow.
Page 20: RC-LH1 core complex from R. palustris Neil Isaacs Department of Chemistry University of Glasgow.

S. Bahatyrova et al, (2004) Nature, 430, 1058-1062

AFM shows the arrangement of photosynthetic complexes in the membrane

Page 21: RC-LH1 core complex from R. palustris Neil Isaacs Department of Chemistry University of Glasgow.

Questions to tax the brain:

What is protein W?

How does LH1 interact with RC?

How does W interact with RC and LH1?

How does the complex assemble?

34 proteins 2 Ubiquinone

19 Bchl 16? Carotenoid

2 Pheophytin Fe

> 70 components & no instructions….

Page 22: RC-LH1 core complex from R. palustris Neil Isaacs Department of Chemistry University of Glasgow.

LH60 column of Rps. palustris 'French' core complex

0

0.1

0.2

0.3

0.4

0.5

0.6

0.7

0.8

0 20 40 60 80 100 120

Fraction Number

Ab

sorb

an

ce (

280n

m)

RC polypeptides

LH polypeptidesPigments/phospholipids

W?

Separation of organic solvent soluble polypeptides

Page 23: RC-LH1 core complex from R. palustris Neil Isaacs Department of Chemistry University of Glasgow.

LH1-RC core

6.5

14

21 -dimers

-polypeptide

-polypeptide10

15

20

W?

6.5

14

21

SDS-PAGE of purified low-molecular weight LH polypeptides

Page 24: RC-LH1 core complex from R. palustris Neil Isaacs Department of Chemistry University of Glasgow.

The crystal structure of the RC LH1 core complex from

Rhodopseudomonas palustris

Aleksander W. Roszak, Tina D. Howard, June Southall, Alastair T. Gardiner, Neil W. Isaacs and Richard J. Cogdell

BBSRC Wellcome Trust

SRS Daresbury, stations14.1 and 9.6

Page 25: RC-LH1 core complex from R. palustris Neil Isaacs Department of Chemistry University of Glasgow.
Page 26: RC-LH1 core complex from R. palustris Neil Isaacs Department of Chemistry University of Glasgow.

Questions:What is protein W?

How does LH1 interact with RC?

How does W interact with RC and LH1?

How does the complex assemble?

34 proteins 2 Ubiquinone

19 Bchl 16? Carotenoid

2 Pheophytin Fe

> 70 components & no instructions….

Page 27: RC-LH1 core complex from R. palustris Neil Isaacs Department of Chemistry University of Glasgow.

Cytochrome bc1(Iwata et al (1998) Science, 281, 64—71)

Page 28: RC-LH1 core complex from R. palustris Neil Isaacs Department of Chemistry University of Glasgow.

F1ATPase Abrahams et al, (1994) Nature, 370, 621--8