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PNW Prostate Cancer SPORE Retreat 2013 Friday, July 12, 2013 Fred Hutchinson Cancer Research Center, M1-A303-307 (Arnold Building) 1100 Fairview Avenue North, Seattle, WA 98109 WELCOME !
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Presentations from 2013 Retreat

Jan 17, 2017

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Page 1: Presentations from 2013 Retreat

PNW Prostate Cancer SPORE Retreat 2013

Friday, July 12, 2013 Fred Hutchinson Cancer Research Center,

M1-A303-307 (Arnold Building) 1100 Fairview Avenue North, Seattle, WA 98109

WELCOME !

Page 2: Presentations from 2013 Retreat

retreat [rɪˈtriːt]

vb (mainly intr) 1. (Military) Military to withdraw or retire in the face of or from action with an enemy, either due to defeat or in order to adopt a more favourable position 2. to retire or withdraw, as to seclusion or shelter 3. (Life Sciences & Allied Applications / Physiology) (of a person's features) to slope back; recede 4. (Group Games / Chess & Draughts) (tr) Chess to move (a piece) back

n 1. the act of retreating or withdrawing 2. (Military) Military a. a withdrawal or retirement in the face of the enemy b. a bugle call signifying withdrawal, esp to within a defended fortification 3. retirement or seclusion 4. a place, (sanatorium or monastery), to which one may retire for refuge, quiet, etc. 5. a period of seclusion, esp for religious contemplation 6. (Medicine) an institution, esp a private one, for the care and treatment of the mentally ill, infirm, elderly, etc. [from Old French retret, from retraire to withdraw, from Latin retrahere to pull back; see retract]

Page 3: Presentations from 2013 Retreat

PNW Prostate Cancer SPORE Advance 2013

Friday, July 12, 2013 Fred Hutchinson Cancer Research Center,

M1-A303-307 (Arnold Building) 1100 Fairview Avenue North, Seattle, WA 98109

WELCOME !

Page 4: Presentations from 2013 Retreat

Prostate Cancer

Page 5: Presentations from 2013 Retreat

PNW Prostate Cancer SPORE

July 12, 2013

Page 6: Presentations from 2013 Retreat

Canary Prostate Active Surveillance Study

(PASS)

Collaborative Links

Page 7: Presentations from 2013 Retreat

The  DOD  Prostate  Cancer  Clinical  Trials  Consor2um  

Collaborative Links

Page 8: Presentations from 2013 Retreat

Team 1: Precision Therapy for Advanced Prostate Cancer

•  MSKCC •  DFCI/Broad/BIDMCC •  Michigan

UW/FHCRC •  Royal Marsden/London •  Weill Cornell

•  UC San Francisco •  UC Los Angeles •  UC Santa Cruz •  UC Davis

UBC OHSU

Team 2: Targeting Adaptive Pathways in Metastatic CRPC

Collaborative Links

SU2C-PCF AACR ‘Dream Teams’

Page 9: Presentations from 2013 Retreat
Page 10: Presentations from 2013 Retreat

Purpose and Intent

PNW Prostate Cancer SPORE Advance 2013

Communicate ideas….

Page 11: Presentations from 2013 Retreat

Purpose and Intent

PNW Prostate Cancer SPORE Advance 2013

Communicate ideas…. -new concepts and next steps -‘test the waters’ -needed resources?

Page 12: Presentations from 2013 Retreat

Purpose and Intent

PNW Prostate Cancer SPORE Advance 2013

Communicate ideas…. Provide feedback…

-reality check -re-direct…extend the idea -provide resources?

Page 13: Presentations from 2013 Retreat

Purpose and Intent

PNW Prostate Cancer SPORE Advance 2013

Communicate ideas…. Provide feedback… Develop (extend) collaborations…

Page 14: Presentations from 2013 Retreat

PNW Prostate Cancer SPORE Retreat 2013

Friday, July 12, 2013

Fred Hutchinson Cancer Research Center, M1-A303-307 (Arnold Building) 1100 Fairview Avenue North, Seattle, WA 98109

10:00am: Welcome, Introductions and Agenda Review (Pete Nelson)

10:10-11:10: Session I: Surveillance/QOL/ Diet/Risk/Biomarkers (Discussion Leader: Bruce Montgomery)

1. Ruth Etzioni: Beyond observation: using modeling to understand recent high-profile studies of PC screening and treatment

2. John Gore: Patient-centered outcomes research in prostate cancer

3. Jonathan Wright: Hyperglycemia and prostate cancer outcomes

4. Marian Neuhouser: Update on vitamin D and prostate cancer

5. Alvin Liu: Prostate cancer biomarkers: secreted proteins and RNA signature

6. Janet Stanford: Genome-wide DNA methylation profiling to distinguish aggressive prostate cancer

11:10-12:10: Session II: Genetics/Genomics (Discussion Leader: Paul Lange)

1. Colin Pritchard: Prostate cancer genomics and precision medicine

2. Colin Collins: Prostate cancer transdifferentiation in 5 minutes

3. Laura Heiser: Exploiting cell line model systems for the study of cancer

4. Jason Bielas: Clinical DNA mutagenesis

5. Robert Bradley: Androgen receptor splicing

6. Min Fang: Evaluation of FISH and methylomic markers of prostate cancer

LUNCH: 12:10 - 1:30pm

1:30-2:30pm: Session III: Androgen Receptor (Discussion Leader: Martin Gleave)

1. Xuesen Dong: Alternative RNA splicing of the AR gene in prostate cancer

2. Joshi Alumkal: Emergent signaling pathways in enzalutamide-resistant prostate cancer

3. Paul Rennie: Inhibiting constitutively active androgen receptor variants with a new class of small molecules

4. Jennifer Bishop: Rational targeting of Her2/EGFR with Lapatinib to overcome Enzalutamide resistance

5. Elahe Mostaghel: Androgens in CRPC

6. Steve Plymate: AR-splice variant transgenic mouse - epithelial and stromal interactions

2:30-3:30pm: Session IV: Therapy and Therapy Resistance-Beyond AR (Discussion Leader: Tom Beer)

1. Chris Ong: Crosstalk between SEMA3C and AR pathways in treatment resistant prostate cancer

2. Evan Yu: Identification of molecular characteristics of PC with 11C-acetate and 18F-FDG PET/CT-directed rapid autopsy

3. Eva Corey: Cabozantinib and prostate cancer

4. Tia Higano: Beyond hormonal therapy

5. Kamal Chatta: The immune response in CRPC

6. David Qian: MDH2 lysine deacetylation mediates Docetaxel resistance

3:30: Break

3:40-4:50pm: Session V: Model Systems and Smorgasbord (Discussion Leader: Robert Vessella)

1. Ming Lam: Disseminated tumor cell heterogeneity

2. Valera Vasioukhin: A novel small molecule inhibitor of Hepsin D13 inhibits metastasis in a genetic murine model of prostate cancer

3. Ralph Buttyan: Stems from non-stems

4. Lawrence True: Pathologic effects of androgen deprivation: volume of cancer & histological changes

5. YZ Wang: A different look at "hallmarks of cancer"

6. George Thomas: Update on circulating tumor cells

7. Colm Morrissey: The emergence and profile of the neuroendocrine phenotype in prostate cancer metastases

4:50-5:00 pm: Summary and Adjourn

5:15-6:15 pm Keynote Speaker – Pelton Auditorium Steven Balk, MD, PhD, Professor of Medicine, Hematology-Oncology Division

Beth Israel Deaconess Medical Center / Harvard Medical School

"Androgen Receptor Functions in Prostate Cancer Development and Progression"

6:15-8:30pm: Dinner – Rooftop Patio in Arnold Building, 5th Floor

Page 15: Presentations from 2013 Retreat

Beyond Observation:Using modeling to understand recent high‐profile studies of PC screening and treatment

Leslie MallingerRachel Hunter‐Merrill

Intervention group 

Control group 

Ruth EtzioniRoman Gulati

Jing Xia

Page 16: Presentations from 2013 Retreat

Perception of PLCO and PIVOT

Questioning Surgery for Early Prostate Cancer

A new study shows that prostate cancer surgery, which often leaves men impotent or incontinent, does not appear to save the lives of men with early-stage disease, who account for most cases, and many of these men would do just as well to choose no treatment at all.The findings were based on the largest-ever clinical trial comparing surgical removal of the prostate with a strategy known as “watchful waiting.” They add to growing concerns that prostate cancer detection and treatment efforts over the past 25 years, particularly in the United States, have been woefully misguided, rendering millions of men impotent, incontinent and saddled with fear about a disease that was unlikely ever to kill them in the first place.

Page 17: Presentations from 2013 Retreat

PLCO and ERSPC

Screening group 

Control group 

0% mortality reduction74% of controls screened during trial40% compliance with biopsy0 lives saved

21 % mortality reductionMuch less contamination86% compliance with biopsy1 life saved per 1000 screened

PLCO

ERSPC

Gulati et al Cancer 2012

Page 18: Presentations from 2013 Retreat

PIVOT and SPCG4Hazard ratio 0.63Absolute risk reduction 2.6%Fraction screen detected 75%

Hazard ratio 0.65Absolute risk reduction 5.4%Fraction screen‐detected 5%

PIVOT

SPCG4

Page 19: Presentations from 2013 Retreat

Modeling PIVOT

• Start with SPCG4 results• Add lead time and overdiagnosis to screen‐detected fraction in 

PIVOT

Absolute risk reduction 5.4% Absolute risk reduction 2.0 %

Xia et al JNCI 2013

Page 20: Presentations from 2013 Retreat

Why are we doing this work?

USPSTFTrials Policy

EVIDENCE MODELS

Etzioni et al Medical Care 2013

Page 21: Presentations from 2013 Retreat

Patient-Centered Outcomes Research

in Prostate Cancer

SPORE Retreat

July 12, 2013 John L. Gore, MD, MS, FACS

[email protected]

Page 22: Presentations from 2013 Retreat

UROLOGY

PCOR in Prostate Cancer

• PCOR helps people and their caregivers

communicate and make informed health

care decisions.

• Research questions derived from

patients or patient-partnered methods

Page 23: Presentations from 2013 Retreat

UROLOGY

Survivorship Care in Prostate Cancer

Page 24: Presentations from 2013 Retreat

UROLOGY

Other PCOR Projects

• Development of patient-centered

pathology reports

• Patient access to information about

clinical trials in prostate cancer

Page 25: Presentations from 2013 Retreat

Glucose Regulation and Prostate Cancer Outcomes

Jonathan Wright, MD

Page 26: Presentations from 2013 Retreat

Is Glucose Regulation the link between obesity and adverse prostate cancer outcomes

• Obesity epidemic in US– Obesity associated PCa recurrence/progression

• Diabetes commonly co‐exists with obesity– Mixed results for diabetes and PCa outcomes– Hyperglycemia is hallmark of diabetes mellitus

• Metformin and weight loss both improve glucose levels• Mixed results for use of metformin and PCa outcomes

• Glucose and insulin are required for cancer cells– Preclinical studies of hyperglycemia and PCa growth– PCa cells from RP have greater insulin receptor staining than benign prostate cells cells

– Other cancers (breast and colon) have reported hyperglycemia associated with higher risk of recurrence

Page 27: Presentations from 2013 Retreat

PNW SPORE Funded Work• Prostate Cancer Diet Study

– Pilot study (19 men)based on Diabetes Prevention Trial• Pre‐prostatectomy; low risk disease

– Intervention associated with: weight loss, improved dietary constituents, improved insulin/glucose related parameters

• VA Regional network database study– ~ 1,700 patients treated for localized prostate cancer– Abnormal glucose (>100mg/dl) at diagnosis independently associated with risk of recurrence (HR 1.5, 95% CI: 1.1‐2.0) 

• Tissue based study of insulin signaling in biopsies– 100 men undergoing prostate biopsy at Seattle VA– Studing differences in insulin‐receptor, IGF‐1R, AKT, AMPK based on use of metformin 

Page 28: Presentations from 2013 Retreat

Prostate Active Lifestyle Study(PALS)

• Collaborators:– Marian Neuhouser, Janet Stanford, Dan Lin, John Gore, Steve Plymate, Ruth Etzioni, Jeannette Schenk, Mike Porter, ColmMorrissey, Xiotun Zhang, Fred Hutchinson Prevention Center

Page 29: Presentations from 2013 Retreat

Prostate Cancer Biomarkers: Secreted proteins and 

RNA signature

Alvin Liu, PhD

Page 30: Presentations from 2013 Retreat

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n=36

Cancer AGR2/CD10 phenotypes and clinical outcomes

AGR2 CD10

Page 31: Presentations from 2013 Retreat

Heavy Internal standards

AGR2

Detection in urine

CRISP3POSTN IL24

PRISM-SRMLC-SRM

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R² = 0.9069

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Urinary cancer-associated proteins 12/14

Page 32: Presentations from 2013 Retreat

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Page 33: Presentations from 2013 Retreat

Prostate Cancer Genomics and Precision Medicine

Colin Pritchard MD, PhDUniversity of Washington

Department of Lab MedicineProstate SPORE Retreat, July 12, 2013

Page 34: Presentations from 2013 Retreat

Emerging Precision Targets

Mutation(s)Advanced

Prostate Cancer Frequency

Utility

DNA Repair Genes ~20%? PARP inhibitors

PI3K Pathway 20-60%(PTEN) PI3K inhibitors

AURKA/N-MYC Common in Neuroendocrine

Aurora Kinase Inhibitors

Page 35: Presentations from 2013 Retreat

UW-OncoPlex Background

• Clinical assay designed to identify actionable alterations in tumors to guide therapy

• >850,000bp sequenced

• Implemented August 2012– Almost 300 cases reported to date

Page 36: Presentations from 2013 Retreat

Colin Pritchard, UW Lab Medicine

UW-OncoPlex™ v3

Genes Targeted: 200DNA Sequenced: >900,000 bp

>500X Coverage

Tier 1: Currently actionable

ABL1 AKT1 ALK AR ASXL1 AURKA BAP1 BCR BCL2L11BRAF BRCA1 BRCA2 CCND1 CCNE1 CDK4 CDK8 CEBPA DDR2

DNMT3A EGFR EML4 EPHB2 ERBB2 FGFR2 FGFR4 FLT3 HIF1AIDH1 IDH2 JAK2 KIF5B KIT KRAS MAP2K1 MET MLLMPL NKX2‐1 NPM1 NRAS PDGFRA PIK3CA PML PTEN RARA

ROS1 RET STK11 TP53 VHL

Tier 2:  Actionable in the near future

ABL2 AKT2 AKT3 ATM AURKB BCOR CBL CBLB CDK6CHEK1 CHEK2 ERBB3 ERBB4 FBXW7 FGFR1 FLT1 FLT4 GATA2GNA11 GNAQ GRM3 HDAC4 HRAS IGF1R IKZF1 JAK3 KDM6AKDR MAP2K2 MAPK1 MC1R MCL1 MDM2  MDM4 MEN1 MITFMLH1 MRE11A MSH2 MSH6 MYC MYCN NF2 NOTCH1 PAX5PDGFRB PIK3R1 PMS2 RAF1 RUNX1 SMO SRSF2 SUZ12 TMPRSS2 TSC1 TSC2 TET2 TYR WT1

Tier 3:  Frequently mutated

APC BAK1 BCL2 CDH1 CDKN2A CREBBP CRLF2 CSF1R CTNNB1EPHA3 EPHA5 EPHB6 ETV6 EZH2 FGFR3 FOXA1 GAB2 GATA3GATA1 GNAS GRIN2A HNF1A IL7R JAK1 MAP2K4 MED12 MUTYHMYCL1 NF1 NOTCH2 PBRM1 PRPF40B PTCH1 PTPN11 PTPRD RB1RICTOR RPS14 SF1 SF3B1 SMAD2 SMAD3 SMAD4 SMARCA4 SMARCB1

SPRY4 SRC TFG TGFBR2 TRRAP U2AF1 U2AF65 ZRSR2

Germlinepharmaco‐genomics

ABCB1 ABCC2 ABCC4 ABCG2 C1orf144 COMT CYP1B1 CYP2C19 CYP2C8CYP2D6 CYP3A4 CYP3A5 DPYD EIF3A ERCC2 ESR1 ESR2 FCGR1AFCGR2A FCGR3A GSTP1 GUCY1A2 ITPA LRP2 MAN1B1 MTHFR NQO1NRP2 SLC19A1 SLC22A2 SLCO1B3 SOD2 SULT1A1 TPMT TYMS UGT1A1UMPS

Page 37: Presentations from 2013 Retreat

Laura  M.  Heiser  Oregon  Health  and  Science  University  

Page 38: Presentations from 2013 Retreat

Chromosomal  position  

Copy  number  aberrations  

Copy

 num

ber  ratio  

(log2

)  Gen

es  

with  Wang,  Grasso,  Gray,  Schiff  

Transcriptional  changes  

Cell  line  model  of  acquired  resistance  

Page 39: Presentations from 2013 Retreat

ALPPL2  expression  stratifies  HER2+  patients  

High  

Low  

Medium  

Page 40: Presentations from 2013 Retreat

PARADIGM  

Curated  Pathways  

Copy  Number  Changes  

Differential  Expression  

KEGG,  Biocarta,…  

Page 41: Presentations from 2013 Retreat

Validating “driver” networks that affect specific cancer hallmarks

Rantala et al., BMC Genomics 12:162, 2011

~100 malignant or nonmalignant cells per

array element

20,000 culture elements per array

Array elements contain siRNAs targeting pathways and/or

microenvironment proteins

Image based assessment of IF

defined responses

Cells  are  grown  on  cell  spot  microarrays  containing  siRNAs  and  assayed  for  multiple  response  endpoints    

DNA    EdU    P53BP1  

siCTRL  

siPLK1  

siRAD51  

siATM  

siBRCA1  

siCHEK2  

Growth  inhibition  following  KD  of  DNA  damage  genes  

Page 42: Presentations from 2013 Retreat

Clinical Mutagenesis

Jason H. Bielas Assistant Member, Translational Research Program, Fred Hutchinson Cancer Research Center

Affiliate Assistant Professor, Department of Pathology, University of Washington

Page 43: Presentations from 2013 Retreat

Cancers Clonally Accumulate Somatic Mutations

Predict speed of progression/ resistance to therapy

Adapted from PNAS 105 (2008) 4283

Page 44: Presentations from 2013 Retreat

Mutations as Cancer Biomarkers

Adapted from Nat Rev Cancer 5 845

Clonal mutations

CTC and ctDNA

Random mutations

Page 45: Presentations from 2013 Retreat

LCM-isolated cancer cells

mtDNA sequencing

Identify somatic mutations

Tumor

GAG ATC G TG AC C

DNA

Mitochondrial separation and mtDNA isolation

Plasma Buffy coat

Dynabead magnetic mtDNA enrichment

Genotypic-selection (restriction digestion)

Frequency of mutant ctmtDNA

Frequency of CTCs

mtDNA Mutation as Cancer Biomakers

Jessica BertoutmtDNA CTC/ctDNAto predict recurrence prostate and nDNAfor early detection ovarian cancer

ColmMorrissey

Nolan Ericson60% clonal mtDNA mutations in prostate cancer

Page 46: Presentations from 2013 Retreat

Alternative splicing of the androgen receptor

Robert BradleyComputational Biology Program, Public Health Sciences DivisionBasic Sciences Division

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(A)ncryptic exonNTD/DBD LBD (A)n

Page 47: Presentations from 2013 Retreat

Transcriptional regulation vs. splicing regulation

2

Ligand-independent AR isoforms are associated with CRPC.

This association occurs across multiple time scales:- (rapid) up-regulation following androgen deprivation- (long-term) stable expression via acquisition of DNA rearrangements

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(A)ncryptic exonNTD/DBD LBD (A)n

AR gene

Does regulated alternative splicing contribute to the acute androgen withdrawal response?

Page 48: Presentations from 2013 Retreat

If AR splicing is regulated, then targeting the spliceosome may be productive

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Aberrant splicing is an important contributor to many solid and liquid cancers.

(Hubert et al, 2013)

Page 49: Presentations from 2013 Retreat

Splicing regulation may contribute to the acute androgen withdrawal response

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Transcriptional up-regulation of AR is common followingandrogen depletion:

Splicing may be regulatedin VCaP, but not 22Rv1:

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Page 50: Presentations from 2013 Retreat

Evaluation of FISH and methylomic markers of

prostate cancerMin Fang, MD, PhD

July 11th, 2013

Contributors:Xiaoyu Qu, PhD, Yu Wu, PhD, Jerry Davison, PhD

SCCA FISH TechnologistsClaudio Jeldres, MD, Chris Porter, MD

Vessella Lab, Nelson Lab

Page 51: Presentations from 2013 Retreat

FISH: TMPRSS2/ERG, AR/X and PTEN• Cohort (FFPE TMA- 4 sections per pt (3 cancer + 1 normal)

– Group 1: 100 patients who did not relapse after 5 years following RRP; – Group 2: 100 patients who relapsed within 5 years following RRP

TMPRSS2/ERG# of pts %

Normal 72 46%Typical fusion 37 23%Atypical fusion 21 13%Rearranged 3'ERG 9 6%Rearranged 5'TMPRSS2 2 1%Other Alternative rearrangements 5 3%CNI** 12 8%Total 158

AR/CEPX# of pts %

Gain of AR and CEPX, but no amplification 8 5%Normal 163 95%Total 171

PTEN/CEP10 # of pts

%

Normal 121 74%Heterozygous deletion** 19 12%Homozygous deletion 7 4%Monosomy 10 2 1%Trisomy 10 15 9%Total 164

HR: 0.13 P=0.022

Page 52: Presentations from 2013 Retreat

Identification of methylomic prognostic markers based on Gleason grade

CHARM: comprehensive high-throughput array-based relative methylation analysis •4.6 million total CpG sites across genome; highly quantitative for 100,000•43,982 gene loci, 4,500 control probes (30 genomic regions) for standardization•Comprehensive statistical program built in R

Cohort: Age-matched; tumor cell content >75%. •Group 1: low-risk with Gleason 3+3 and below. (n=8)•Group 2: high-risk with Gleason 3+4 and above. (n=8)•Group 3: normal prostate tissue or benign prostate lesions. (n=10)

Validation: by pyrosequencing quantitative analysis•GS6 (n=20); GS7 (n=19); GS8/9 (n=14) Total n=53•All 6 selected gene loci significant for Cancer vs. Normal•4 of 6 significant for GS6 vs GS7/8/9 adjusted for age•ROC curve using the best marker is 0.86; adding the

second best is 0.89.

Page 53: Presentations from 2013 Retreat

A B

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Page 54: Presentations from 2013 Retreat

Alternative RNA Splicing of the AR gene in Prostate Cancer CellsXuesen Dong

Assistant Professor, Vancouver Prostate Centre, Department of Urologic Sciences, University of British Columbia

I. PCa cell models & the AR Gene Profiles

Page 55: Presentations from 2013 Retreat

II. Alternative RNA splicing of AR-v7 is coupled with AR gene transcription & requires recruitments of hnRNP I, U2AF65 and ASF/SF2 to AR pre-mRNA

1) AR/DHT vs AR/MDV2) Reversible regulation by AR signaling3) ActD/DRB/TSA4) Co-recruitment of pol II and splicing factors5) Cells vs castration resistant VCaP tumors

6) AR-v7 minigenes locate ISE and ESE7) RNA ChIP and RNA pulldown demonstrate

pre-mRNA - splicing factor interactions8) hnRNP I vs U2AF65 and ASF/SF2

(weak) (strong)

Page 56: Presentations from 2013 Retreat

Seattle:Shihua SunElahe MostahelStephen Plymate

Research Funds:Prostate SPORECIHRProstate Cancer Canada

Vancouver:Liangliang Liu (postdoc)Ning Xie (technician)

AD ADT CRPCAdaptive survivalDifferentiationEMTAndrogen phobic ?

AR gene transcriptionAR function AR-v7 expression/function

Page 57: Presentations from 2013 Retreat

Emergent signaling pathways in enzalutamide-resistant prostate

cancer Joshi Alumkal

OHSU

Page 58: Presentations from 2013 Retreat

Activitome: Comprehensive cellular pathway activity description

Slide courtesy of Laura Heiser

Page 59: Presentations from 2013 Retreat

List of prostate cancer cell lines available for use in this proposal.

Number Name Patient Source

1 22Rv1 primary, xenograft of CWR22R-2152

2 CA-HPV-10 derived from cells from a prostatic adenocarcinoma

3 CWR-R1 primary, xenograft of CWR22R

4 DU145 male prostate carcinoma, brain metastasis

5 DuCaP dural metastasis (derived from same patient as VCaP)

6 HH870 primary prostate adenocarcinoma

7 IGR-CaP1 primary prostate tumor

8 LAPC-4 lymph node metastatis, xenograft

9 LNCAP-19 Lymph node metastasis (LNCaP derivative)

10 LNCaP-C4 Lymph node metastasis (LNCaP derivative)

11 LNCaP-C4-2 Lymph node metastasis (LNCaP derivative)

12 LNCaP-FGC Metastatic prostate carcinoma, lymph node

13 LNCaP-RF Lymph node metastasis (LNCaP derivative)

14 MDA PCa 2b bone metastasis

15 MDA-PrCa 1 ascites of patient with metastatic prostate cancer

16 NCI-H660 metastatic small cell prostate carcinoma

17 PC3 Grade IV prostate adenocarcinoma, bone metastasis

18 PC-346C primary prostate tumor (xenografted)

19 PC-3M derivative of PC3

20 VCaP vertebral bone metastasis (same patient as DuCaP)

Enzalutamide Response in a Prostate Cancer Cell Line Panel

All cell lines have undergone RNA-seq, whole exome-seq

DOD Synergistic Idea Award (Alumkal-Korkola-Heiser) Jim Korkola

Page 60: Presentations from 2013 Retreat

Functional RNAi and drug screening

“Co-Clinical” Trial

Page 61: Presentations from 2013 Retreat

Inhibiting constitutively active androgen receptor variants 

with a new class of small molecules

Paul Rennie, Ph.D.Director, Laboratory Research, Vancouver Prostate Centre

Professor, Department of Urologic Sciences, UBC

Page 62: Presentations from 2013 Retreat

•AR-Variants lacking the C-terminal ligand binding domain (LBD) provide a strong rationale for the pursuit of new avenues of therapeutic intervention distinct from current antiandrogens targeting the LBD. •Suitable binding sites on the AR DNA Binding Domain (DBD) subunit were evaluated using computer-aided screening analysis. Potential compounds (>300) that could disrupt the interaction between the AR DBD and DNA were identified and evaluated using in-vitro biological assays.

INHIBITING CONSTITUTIVELY ACTIVE ANDROGEN RECEPTOR

VARIANTS WITH A NEW CLASS OF SMALL MOLECULES

Page 63: Presentations from 2013 Retreat

Inhibition of cell proliferation using compound VPC14228. LNCaP (Androgen sensitive cells); MR49F (enzalutamide-resistant cells); PC3 (no AR control cells).

Wild type AR and the AR V7 variant were transiently transfected into PC3 cells and treated with serial dilutions of compound VPC-14228 for 24 hours. The activity of each AR protein was then measured using a luciferase reporter under the control of an ARE promoter.

VPC 14228 Activity Profile

Page 64: Presentations from 2013 Retreat

Point mutations can validate drug binding site

Point mutations

Point mutations were introduced in the AR DBD constructs at locations predicted to affect VPC-14228 binding. The mutated AR DBDs were transiently transfected in PC3 cells. After treatment with 10 µM 14228, the activity of each mutated AR DBD was measured using a luciferase reporter under the control of an ARE promoter. Mutations #2 and #4 affect the capability of 14228 to bind to the DBD as predicted.

Page 65: Presentations from 2013 Retreat

Rational targeting of Her2/EGFR with Lapatinib to overcome Enzalutamide 

resistanceJennifer Bishop, phD

Vancouver Prostate Centre

Page 66: Presentations from 2013 Retreat

EGFR/HER2 are targets for combination therapy

AR

HER2

AKT ERK

YB‐1

HER2

Enz Res‐49F 

- - + +- + - +

AR

β‐actin

PSA

FKBP5

R1881Lapatinib

0

0.5

1

1.5

2

2.5

LNCaP MR42D MR49F

Rel

ativ

e m

RN

A ex

pres

sion YB‐1 Expression

Enz Res 

0

1

2

3

4

5

6

7

LNCaP MR42D MR49F

Rel

ativ

e m

RN

A ex

pres

sion EGFR

HER2

HER3

AR

EGF/HER Expression

Enz Res 

Page 67: Presentations from 2013 Retreat

Lapatinib delays Enzalutamideresistance

0

0.2

0.4

0.6

0.8

1

1.2

1 10 100

Rel

ativ

e ce

ll vi

abili

ty

Drug concentration (μM)

MDV3100

Lapatinib

MDV3100+Lapatinib0

0.2

0.4

0.6

0.8

1

1.2

1 10 100

Rel

ativ

e ce

ll vi

abili

ty

Lapatinib (μM)

LNCaPMR42DMR49F

LNCaP‐Combination Treatment Lapatinib Treatment‐Enz Resistant Cells

MDV

MDV+Lapatinib

MDV

MDV+Lapatinib

Page 68: Presentations from 2013 Retreat

Effective therapies target pathways of resistance & CRPC

• Combination therapies may target a variety of AR activators– Oncogenic pathways (AKT‐ERK)– Molecular chaperones (Clusterin)

LAPATINIB

Page 69: Presentations from 2013 Retreat

Androgens in CRPC

Elahe Mostaghel, M.D., Ph.D.Associate Member, Clinical Research

Fred Hutchinson Cancer Research Center

Page 70: Presentations from 2013 Retreat

Modeling Androgens in CRPC1. Are there androgens in CRPC? Are they driving recurrence? Can we use them to predict response to therapy?

23.12 Study 0945 35 Study 092178 Study 1101 96NatHx 141 Study 091123.1 Study 101970 Study 1022

Delayed recurrenceRecover basal DHT levels

More rapid recurrenceHigher than basal DHT levels

Recurrence with very low DHT levels

pg/m

gtis

s ue

012345

10

20

AR T877A PTEN negERG Fusion

ERG Fusion

pg/m

gtis

sue

012345

10

20

pg/m

gtis

s ue

012345

10

20

T intactDHT intactT CxDHT Cx

Page 71: Presentations from 2013 Retreat

2. How do androgens in recurrent tumors influence other driver pathways ?   AR splice variants, PTEN/PI3K, TMPRSS2:ERG

3. How will tumor androgens influence co‐targeting strategies?

86.2 Study 1004

ARv567

58 Study 1031

ARv567

Minimal castration response Low DHT levels

PTEN negERG Fusion

pg/m

gtis

s ue

012345

10

20

77 Study 1001

ARv567

147 Study 0925

ARv567

Minimal castration response Persistent or higher DHT levels

AR H874Y

pg/m

gtis

s ue

012345

10

20

136 study 0901

ARv567

105 Study 0933

ARv567

81 Study 0908

ARv567

pg/m

gtis

sue

012345

10

20

Moderate castration responseRecover basal DHT levels

PTEN neg PTEN neg

73 Study 1036

AR T877A, V715M

ARv567

T intactDHT intactT CxDHT Cx

Page 72: Presentations from 2013 Retreat

4. How do other therapies influence tumor androgens? Is this relevant to their mechanisms of activity? 

IGFR inhibitors, MDV, Docetaxel may impact tumor androgens

0.0368

0.0002

0.0045

pg /

mg

/ tis

sue

0.0519

0.0519

pg /

mg

/ tis

sue

0.0005

012345

1020

81 Study 0908

0.0667

Taxane Mediated Androgen Suppression?

T intactDHT intactT CxDHT CxT DocetaxelDHT Docetaxel

5. What will measuring androgens in patient tumor biopsies tell us?Are they driving recurrence? Can we use them to predict response to therapy?

Modeling Androgens in CRPC

Page 73: Presentations from 2013 Retreat

AR‐splice variant transgenic mouse ‐epithelial and stromal interactions 

Stephen R. Plymate, M.D.University of Washington

Page 74: Presentations from 2013 Retreat

AR variant ARv567es induces carcinogenesis in a novel transgenic mouse model of prostate cancer Gang Liu, Cynthia Sprenger, Shihua Sun, Kathryn Soriano Epilepsia, Kathleen Haugk, Xiaotun Zhang, Ilsa Coleman, Peter S. Nelson, Stephen Plymate 

Foci of hyperplasia could be seen in young adults (16 weeks), with a gradual progression to PIN lesions by 40 weeks. 

Page 75: Presentations from 2013 Retreat

Castration and sham operations performed on 50‐week old mice. Three weeks post‐castration, well‐differentiated adenocarcinoma is seen in the sham‐operated mice. More advanced progression to invasive adenocarcinoma is evident in the castrated group. 

Page 76: Presentations from 2013 Retreat

EMT markers were also examined. Loss of E‐cadherin, and higher expression of Twist and Vimentin suggested an epithelial to mesenchymal transition (EMT) 

Page 77: Presentations from 2013 Retreat

Our Pb‐ARv567es mouse demonstrates that the distinct AR variant transcriptome is a common and direct molecular consequence when AR‐Vs occur.

Gene set enrichment analysis (GSEA) (Figure 5A and 5B) showed differentially regulated gene sets that included inflammatory related cytokines, transcriptional factors, and tumorigenesis‐associated factors. 

Page 78: Presentations from 2013 Retreat

Identification of molecular characteristics of PC with 11C‐acetate 

and 18F‐FDG PET/CT‐directed rapid autopsy

Evan Y. Yu, M.D.

Page 79: Presentations from 2013 Retreat

TAN program, acknowledging Bob Vessella and many others in the room, and how it emphasizes difference in Gleason, PSA and CGA expression in bone mets.  Thus, heterogeneity is proven and could have major impact.

Does it impact sensitivity and resistance to systemic therapy?

Are we really capturing all the heterogeneity?  We know that PET can show it in bone mets.  

And what exactly does PET tell us.  Well it depends on the tracer.  We believe FDG is glycolytic activity and uptakes better in lytic lesions due to more flow, fluoride is like a fancy bone scan for blastic bone remodeling and acetate/choline image lipid metabolism.  But why are some lesions hot and others completely cold?  And when uptake increases or decreases, what exactly is that telling us about the biologic manipulation of the tumor.

1

Page 80: Presentations from 2013 Retreat

Case #1

PSA baseline when dasatinib added to nilutamide 316 rising to 954 after 6 cycles of therapyCT and bone scan stable although bone scan was basically superscan at baseline.

There is a disconnect between PSA and fluoride PET imaging changes and this patient fell in the middle of the group in terms of response.  But I want to emphasize the heterogeneity.  Not all bone mets respond, so what is important?  Currently, we have analyzed only a 15 cm FOV and we need to do entire torso analyses, but the strength of PET is that we can see what is happening at independent sites.

And I have other examples from my earlier acetate and FDG studies, but not enough time for the nuc med guys to pull pretty images.

2

Page 81: Presentations from 2013 Retreat

PET acetate/fluoride from IND going in now and protocol going into IRB and FDG 3rdparty payor

The hottest lesion may be the most metabolically active and drug resistant lesions (will have all prior known therapies) and a completely cold lesion on PET should be studied to understand why

For instance, if we find out that FDG hot lesions don’t express as much AR and have AR gene signatures that are low, we might pair it’s use more with chemotherapy or visa versa

Metastatic biopsy is one lesion, blood/urine markers are whole body sum

It would be great if we could use PET for selection of treatment or pairing with specific drugs in the future

3

Page 82: Presentations from 2013 Retreat

Cabozantinib and prostate cancer

Eva Corey, Ph.D.University of Washington, Urology

Page 83: Presentations from 2013 Retreat

Cabozantinib Cabozantinib and Prostate Cancerand Prostate Cancer

MET VEGFR2 P-MET Encouraging anti‐tumor activity in metastatic  

i icastration‐resistant patients with progressive disease

Complete or partialMET

0

2

4

Expr

essi

on(lo

g)

VEGFR2m

0

2

4

Expr

essi

on (l

og)

KIT

0

2

4

Expr

esio

n (lo

g)

AXL

0

2

4

Expr

essi

on (l

og)

RET

0

2

4

Expr

esio

n (lo

g)

Complete or partial resolution of lesions on bone scan in majority of subjects

RET4)

AXL4)

VEGFR2 m4

g)MET

4)

KIT4)

-4

-2

Rel

ativ

e E

-4

-2

Rel

ativ

e E

-4

-2

Rel

ativ

e E

-4

-2

Rel

ativ

e E

-4

-2

Rel

ativ

e E

j Evidence of tumor 

regression in soft tissue lesions in majority of 

-2

0

2

4

Rel

ativ

e Ex

pres

sion

(log

)

-2

0

2

Rel

ativ

e Ex

pres

sion

(log

-2

0

2

Rel

ativ

e Ex

pres

sion

(log

-2

0

2

4

Rel

ativ

e Ex

pres

sion

(log

)

-2

0

2

Rel

ativ

e Ex

pres

sion

(logsubjects

-4

AD: 0.84 0.20 NE: 2.21 0.18

P=0.0003

R-4

AD: -0.015 0.090NE: 0.639 0.098

P=0.0008

R-4

AD: 0.17 0.39 NE: 1.77 0.51

P=0.042

R-4

AD: -2.20 0.33NE: 0.19 0.33

P=0.014

R -4

AD: -1.62 0.38 NE: 1.77 0.46

P=0.0007

R

Page 84: Presentations from 2013 Retreat

Cabozantinib Cabozantinib Effects Effects on on PCa Growth in PCa Growth in BoneBoneLuCaP 23.1 (60 mg/kg)60 60

C4-2B (60 mg/kg)

LuCaP 23.1 (30 mg/kg)

60

20

40

PS

A (

ng/m

l)

20

40

PS

A (

ng/m

l)

20

40

PSA

(ng/

ml)

0 2 4 60

Weeks0 2 4 6

0

Weeks0 5 10 15

0

Weeks

C4 2B Subcutaneous Tumors

60

C4-2B Subcutaneous Tumors(60 mg/kg)

PSATuV

1200

1500

20

40

PSA

(ng/

ml)

300

600

900

TuV

(cc)

0 2 4 6 8 100

Weeks0 2 4 6 8 10

0

300

Weeks

Page 85: Presentations from 2013 Retreat

Prostate Immunology

Antigen

Optimal Dendritic cells– polarized DC

Reversing immunosuppression (Tregs/Reg DCs)

Effector CTL/NK cells

Gurkamal Chatta

Virginia Mason Medical Center

July 12th, 2013

Page 86: Presentations from 2013 Retreat

STUDY DESIGN – Placebo arm and role of GM-CSF

Dichotomy between overall survival and anti-tumor response

Lack of correlation between survival and T cell response

Higher antibody response to PAP-GMCSF vs PAP

Nature of vaccine – Adoptive therapy vs Dendritic cell based Patient to patient variation: Each dose - 40 million cells

expressing the costimulatory molecule CD54. COST – $100,000 for 4 months

CRITIQUE/QUESTIONS (PROVENGE)

Page 87: Presentations from 2013 Retreat

Signal 1. (antigen): Specificity of response

Signal 2. (costimulatory molecules): Magnitude

Signal 3. (IL-12, cytokines, other): Effector functions

Signal 4. (IL-12, Vitamins A&D, other): Peripheral homing

Treg

Ag-loaded DCmature “standard”

NKCTL Th1

NKCTL Th1NK

CTL Th1

NKCTL Th1

Ag-loaded DCimmature

Ag-loaded DCpolarized

TregNK

CTL Th1Treg

NKCTL Th1Treg

NKCTL Th1 Treg

Page 88: Presentations from 2013 Retreat

Tumor

Th2(undesirable;

tumor-promoting)

Th1/CTL/NK cells(desirable; promote tumor elimination)

Signal 1. (antigen)Signal 2. (costimulation)

Signal 3. (IL-12 family, IFNs, other factors)Signal 4. (IL-12,Vit A, Vit D, other factors)

Tregs(undesirable;

tumor-promoting)

NK

CTL

Th1

Th17(unclear role; may

promote tumorprogression)

Ag-loaded DCs

1. high specificity2. high magnitude3. killer functions

4. homing to tumors

Page 89: Presentations from 2013 Retreat

Maturation Status and Function of DC1 is Not Affected by Loading with Apoptotic PCa Cells

0 2 4 6 8 10 12IL-12p70 (ng/ml)

DC1

DC1+ LNCap

sDC

sDC+ LNCap

CD86 CD83 CCR7

DCs fed with apoptotictumor cells during theexposure to maturation-inducing cocktail.

Exposure of maturing DCs to apoptotic LNCap cells does not impair their mature status and high IL-12producing capacity of DC1s. Left: Phenotype. Right: High IL-12p70 producing capacity DC1. DC1s,sDCs IL-1/TNF/IL-6/PGE2-matured DC), or immature DCs were stimulated with CD40L-transfected J558cells for 24 h.

Expression of maturation markers

Page 90: Presentations from 2013 Retreat

Disseminated Tumor Cell Heterogeneity 

Hung‐Ming Lam, PhDGU Cancer Lab

University of WashingtonPNW Prostate Cancer SPORE Retreat 2013

Funding: PCF Young Investigator Award, PNW Prostate Cancer SPORE Career Development Award

Page 91: Presentations from 2013 Retreat

Single Disseminated Tumor Cell (DTC)

Red – Pan-cytokeratinGreen - PSA

DTC 

DTC Single CellNED vs. ADV

EpCAM+/CD45‐ cell 

NED: No evidence of disease, after >5 years of radical prostatectomy with an undetectable PSAADV: Advanced disease, radiographic bone metastasis or PSA relapse after primary curative therapy

Page 92: Presentations from 2013 Retreat

Removing cells withErythroid progenitor‐like signature 

Erythroid progen

itor‐like

Prostate epithelial

EpCAM intensity 2 3 4

45 cells50 cells

N=95 # DTC #  patients

NED 42 5

ADV 53 6

Page 93: Presentations from 2013 Retreat

Two populations of DTC in ADV patientsNED ADV_1 ADV_2 N=44 # DTC #  patients

NED 7/42 (16%)

4/5

ADV 37/53(69%)

6/6

NEDADV?

Page 94: Presentations from 2013 Retreat

Larry True, MD

Professor of Pathology

PNW PrCa Retreat 2013

Pathologic effects of androgen deprivation:

Histological changes

Volume of cancer

Coalescent

corpora

amylacea

Inflamma

-tion

Atrophy

Basal cell

hyperplasia

BenignBenignBenign

Spaces w/o

cells

Intraductal

cancer

Single

inconspicuous

cancer cells

CancerCancerCancer

nerve

duct

Intraductal

CA

Corpora

amylacea

Basal

cells

CA

CA

Page 95: Presentations from 2013 Retreat

Estimating volume of cancerSimilar volume, different tumor cellularity

Cancer

region

No neoadjuvant Abiraterone

Cancer

cell

Ways to estimate cellularity

Visual estimate (as %)

Stereological

Image analysis (% AMACR)

Count the cells

Caveats (precision, accuracy, effort)

Quickest, low precision

Novel (not tried)

? effort, reproducibility (threshold, ROI)

Hi effort, Holmes effect (gold standard)

Cancer

cell

Cancer

cells

Cancer

cell

Cancer

cells

Page 96: Presentations from 2013 Retreat

Estimates of tumor cellularityAbiraterone trial, 4 pathologists

Low cellularity cases High cellularity cases

tumor

cellularity

We are good at estimating low

(<5%) cellularity cases.

We aren’t very precise at

estimating higher (>10%)

cellularity cases.

How precise should we be?

Holmes effect

The number of translucent objects (nuclei)

increases with section thickness.

Page 97: Presentations from 2013 Retreat

A Different Look at “Hallmarks of Cancer”

YZ Wang, Ph.D.University of British ColumbiaVancouver Prostate Centre

Page 98: Presentations from 2013 Retreat

Hallmarks of cancer: 

– Considered fundamental to understanding cancer biology– Number increased as our knowledge expanded

(Hanahan & Weinberg, 2011)

6 Hallmarks

Year: 2000

10 Hallmarks

Year: 2011

Cancer

>15 Hallmarks??

Year: 2020

Page 99: Presentations from 2013 Retreat

A proposed model for the central, regulatory immunosuppressive role of cancer-generated lactic acid

Page 100: Presentations from 2013 Retreat

Hallmarks of Cancer in 2015 (Our version)• A Different Perspective:

– A hierarchy of hallmarks?– Cancer cells would 

actively generate fundamental hallmarks, from which the other hallmarks would arise Angiogenesis

Proliferation

Metastasis

Immune Suppression

Evading apoptosis

Genome instability

Epi‐genetics

Killercells Helper

cells

Page 101: Presentations from 2013 Retreat

See the entire presentation of Steven Balk’s talk on the

PNW Prostate Cancer SPORE website:

rtalaman
Text Box
prostatespore.fhcrc.org/resources/video/#Balk