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Drought index based on remote sensing, using ’R’ and ’raster’ package, in B´ ıo-B´ ıo region, Chile. Francisco Zambrano Bigiarini INIA 7 de diciembre de 2012 [email protected] (INIA) Drought index based en RS using R 7 de diciembre de 2012 1 / 35
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Presentación Índice de Sequía Agrícola VCI (Vegetation Condition Index)

Oct 29, 2014

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Corresponde a la presentación realizada por Francisco Zambrano Bigiarini en el primer seminario internacional: “Gestión y monitoreo de la variabilidad climática y el uso eficiente del recurso hídrico en la región semiárida de Coquimbo”, organizado por el Centro de Estudios Avanzados en Zonas Aridas (CEAZA), efecutuado los dias 26 y 27 de noviembre del 2012
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Page 1: Presentación Índice de Sequía Agrícola VCI (Vegetation Condition Index)

Drought index based on remote sensing, using ’R’ and’raster’ package, in B́ıo-B́ıo region, Chile.

Francisco Zambrano Bigiarini

INIA

7 de diciembre de 2012

[email protected] (INIA) Drought index based en RS using R 7 de diciembre de 2012 1 / 35

Page 2: Presentación Índice de Sequía Agrícola VCI (Vegetation Condition Index)

Outline

1 General Review

2 Vegetation Condition Index (VCI)

3 Preliminary Results

4 Recommendations

[email protected] (INIA) Drought index based en RS using R 7 de diciembre de 2012 2 / 35

Page 3: Presentación Índice de Sequía Agrícola VCI (Vegetation Condition Index)

General Review

Drought and its Classification

DefinitionThere is not a precise definition of drought

• ’drought means a sustained, extended deficiency in precipitation’ (WMO,1986)

• ’the percentage of years when crops fail from the lack of moisture’ (FAO, 1983)

• .....

Depending on the field/context, a drought event can be

1 Meteorological: drought is usually based on long-term precipitation departures fromnormal.

2 Hydrological: drought refers to deficiencies in surface and subsurface water supplies.

3 Agricultural: drought occurs when there is insufficient soil moisture to meet the needs of aparticular crop at a particular time.

[email protected] (INIA) Drought index based en RS using R 7 de diciembre de 2012 4 / 35

Page 4: Presentación Índice de Sequía Agrícola VCI (Vegetation Condition Index)

General Review

Why use remote sensing for drought assessment?

Advantages

• Local and global monitoring.

• Spatial and temporal assesment.

• Widly used in the last two decades for monitoring vegetationcondition.

• A good choice for a developing country, which have insufficientdensity of weather stations

• Since 2000 we have data with highly temporal resolution and mediumspatial resolution from sensor MODIS.

[email protected] (INIA) Drought index based en RS using R 7 de diciembre de 2012 5 / 35

Page 5: Presentación Índice de Sequía Agrícola VCI (Vegetation Condition Index)

General Review

Normalized Difference Vegetation Index (NDVI)

In short

It is a measure of the vegetation health.

NDV I =NIR− V IS

NIR+ V IS(1)

−1 ≤ NDV I ≤ 1

But in agricultural, its value is abovezero.

0 − > poor vegetation condition.1 − > good vegetation condition

[email protected] (INIA) Drought index based en RS using R 7 de diciembre de 2012 6 / 35

Page 6: Presentación Índice de Sequía Agrícola VCI (Vegetation Condition Index)

General Review

Informatic tools for remote sensing and GIS

Wide variety of softwares

• Propietary (Very high cost applications): ENVI, ERDAS, ESRI, Matlab

• OpenSource: GRASS GIS, QGIS, ILWISS, R

What is needed?

• Procesing a huge amount of data raster.

• Perform sophisticated data analysis and graphics.

• Interact with other software.

• Work efficiently

[email protected] (INIA) Drought index based en RS using R 7 de diciembre de 2012 7 / 35

Page 7: Presentación Índice de Sequía Agrícola VCI (Vegetation Condition Index)

Vegetation Condition Index (VCI)

VCI features (Kogan,1994)

• Derived from the NDVI

• Was designed to separate the weather related component of NDVIfrom ecological factors.

• Reflects the spatial and temporal vegetation variability.

• Its a scaling of the NDVI between its maximum and minimum.

• Has excellent ability to detect drought and to mesure time of itsonset, intensity, duration, and impact on vegetation.

• Its value goes between 0 and 100 %

V CIi = 100NDV Ii −NDV Imin

NDV Imax −NDV Imin(2)

[email protected] (INIA) Drought index based en RS using R 7 de diciembre de 2012 9 / 35

Page 8: Presentación Índice de Sequía Agrícola VCI (Vegetation Condition Index)

Vegetation Condition Index (VCI)

Calculation example for a single pixel

1 We use data from MODIS sensor (2000-2012), 16 days composite.

2 Firstly we need an smoothed NDVI. (LOWESS (Cleveland,1981))

[email protected] (INIA) Drought index based en RS using R 7 de diciembre de 2012 10 / 35

Page 9: Presentación Índice de Sequía Agrícola VCI (Vegetation Condition Index)

Vegetation Condition Index (VCI)

Calculation example for a single pixel

[email protected] (INIA) Drought index based en RS using R 7 de diciembre de 2012 11 / 35

Page 10: Presentación Índice de Sequía Agrícola VCI (Vegetation Condition Index)

Vegetation Condition Index (VCI)

Calculation example for a single pixel

[email protected] (INIA) Drought index based en RS using R 7 de diciembre de 2012 12 / 35

Page 11: Presentación Índice de Sequía Agrícola VCI (Vegetation Condition Index)

Vegetation Condition Index (VCI)

NDVI and VCI, 2000-2012

[email protected] (INIA) Drought index based en RS using R 7 de diciembre de 2012 13 / 35

Page 12: Presentación Índice de Sequía Agrícola VCI (Vegetation Condition Index)

Preliminary Results

Whole region

[email protected] (INIA) Drought index based en RS using R 7 de diciembre de 2012 15 / 35

Page 13: Presentación Índice de Sequía Agrícola VCI (Vegetation Condition Index)

Preliminary Results

Whole region

[email protected] (INIA) Drought index based en RS using R 7 de diciembre de 2012 16 / 35

Page 14: Presentación Índice de Sequía Agrícola VCI (Vegetation Condition Index)

Preliminary Results

Spatial and temporal evolution in a drought season

[email protected] (INIA) Drought index based en RS using R 7 de diciembre de 2012 17 / 35

Page 15: Presentación Índice de Sequía Agrícola VCI (Vegetation Condition Index)

Preliminary Results

Spatial and temporal evolution in a drought season

[email protected] (INIA) Drought index based en RS using R 7 de diciembre de 2012 18 / 35

Page 16: Presentación Índice de Sequía Agrícola VCI (Vegetation Condition Index)

Preliminary Results

Spatial and temporal evolution in a drought season

[email protected] (INIA) Drought index based en RS using R 7 de diciembre de 2012 19 / 35

Page 17: Presentación Índice de Sequía Agrícola VCI (Vegetation Condition Index)

Preliminary Results

Spatial and temporal evolution in a drought season

[email protected] (INIA) Drought index based en RS using R 7 de diciembre de 2012 20 / 35

Page 18: Presentación Índice de Sequía Agrícola VCI (Vegetation Condition Index)

Preliminary Results

Spatial and temporal evolution in a drought season

[email protected] (INIA) Drought index based en RS using R 7 de diciembre de 2012 21 / 35

Page 19: Presentación Índice de Sequía Agrícola VCI (Vegetation Condition Index)

Preliminary Results

Spatial and temporal evolution in a drought season

[email protected] (INIA) Drought index based en RS using R 7 de diciembre de 2012 22 / 35

Page 20: Presentación Índice de Sequía Agrícola VCI (Vegetation Condition Index)

Preliminary Results

Spatial and temporal evolution in a drought season

[email protected] (INIA) Drought index based en RS using R 7 de diciembre de 2012 23 / 35

Page 21: Presentación Índice de Sequía Agrícola VCI (Vegetation Condition Index)

Preliminary Results

Spatial and temporal evolution in a drought season

[email protected] (INIA) Drought index based en RS using R 7 de diciembre de 2012 24 / 35

Page 22: Presentación Índice de Sequía Agrícola VCI (Vegetation Condition Index)

Preliminary Results

Spatial and temporal evolution in a drought season

[email protected] (INIA) Drought index based en RS using R 7 de diciembre de 2012 25 / 35

Page 23: Presentación Índice de Sequía Agrícola VCI (Vegetation Condition Index)

Preliminary Results

Spatial and temporal evolution in a drought season

[email protected] (INIA) Drought index based en RS using R 7 de diciembre de 2012 26 / 35

Page 24: Presentación Índice de Sequía Agrícola VCI (Vegetation Condition Index)

Preliminary Results

Spatial and temporal evolution in a drought season

[email protected] (INIA) Drought index based en RS using R 7 de diciembre de 2012 27 / 35

Page 25: Presentación Índice de Sequía Agrícola VCI (Vegetation Condition Index)

Preliminary Results

Spatial and temporal evolution in a drought season

[email protected] (INIA) Drought index based en RS using R 7 de diciembre de 2012 28 / 35

Page 26: Presentación Índice de Sequía Agrícola VCI (Vegetation Condition Index)

Preliminary Results

Spatial and temporal evolution in a drought season

[email protected] (INIA) Drought index based en RS using R 7 de diciembre de 2012 29 / 35

Page 27: Presentación Índice de Sequía Agrícola VCI (Vegetation Condition Index)

Preliminary Results

Spatial and temporal evolution in a drought season

[email protected] (INIA) Drought index based en RS using R 7 de diciembre de 2012 30 / 35

Page 28: Presentación Índice de Sequía Agrícola VCI (Vegetation Condition Index)

Preliminary Results

Spatial and temporal evolution in a drought season

[email protected] (INIA) Drought index based en RS using R 7 de diciembre de 2012 31 / 35

Page 29: Presentación Índice de Sequía Agrícola VCI (Vegetation Condition Index)

Preliminary Results

Spatial and temporal evolution in a drought season

[email protected] (INIA) Drought index based en RS using R 7 de diciembre de 2012 32 / 35

Page 30: Presentación Índice de Sequía Agrícola VCI (Vegetation Condition Index)

Recommendations

Recommendations

• Analysis in the agricultural area (LANDCOVER).

• Consider the period most sensitive for crop growth.

• Validation of the VCI, make regression analysis with some variables.(crop yield, biomass, rainfall,...)

• Make research in the sense to extend the time series of NDVI images(NOAA, AVHHR).

• Sophisticated time series analysis.

• Extend the analysis to whole country.

[email protected] (INIA) Drought index based en RS using R 7 de diciembre de 2012 34 / 35

Page 31: Presentación Índice de Sequía Agrícola VCI (Vegetation Condition Index)

Recommendations

Thanks?Questions?

[email protected] (INIA) Drought index based en RS using R 7 de diciembre de 2012 35 / 35