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Open data in life sciences: why and how David Osimo, The Lisbon Council Laia Pujol, ESADE
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Open Data in Life Sciences: Why and Ho › 2018-gtipa-summit-david-osimo.pdfLife science pioneering open science Field of Science % OA Multidisciplinary 66% Agriculture, forestry,

Jun 07, 2020

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Page 1: Open Data in Life Sciences: Why and Ho › 2018-gtipa-summit-david-osimo.pdfLife science pioneering open science Field of Science % OA Multidisciplinary 66% Agriculture, forestry,

Open data in life sciences: why and how

David Osimo, The Lisbon Council

Laia Pujol, ESADE

Page 2: Open Data in Life Sciences: Why and Ho › 2018-gtipa-summit-david-osimo.pdfLife science pioneering open science Field of Science % OA Multidisciplinary 66% Agriculture, forestry,

Why?

Page 3: Open Data in Life Sciences: Why and Ho › 2018-gtipa-summit-david-osimo.pdfLife science pioneering open science Field of Science % OA Multidisciplinary 66% Agriculture, forestry,

The need for open science

• 4th paradigm, all science becomescomputational

• Replicability: 90% of scientistsconsider that “we are in a reproducibility crisis”

• Research waste: “85% of biomedicalresearch efforts are wasted”

• Attrition rate: “more than 80% of new drugs fail, usually in the late-stage of its development”

Osimo and Pujol, 2018. Opening Up Scientific Data For Innovation. Available at datalandscape.eu

Page 4: Open Data in Life Sciences: Why and Ho › 2018-gtipa-summit-david-osimo.pdfLife science pioneering open science Field of Science % OA Multidisciplinary 66% Agriculture, forestry,

Life science pioneering open science

Field of Science % OA

Multidisciplinary 66%

Agriculture, forestry, fisheries 42%

Biological sciences 39%

Basic medical research 38%

Other agricultural science 38%

Other medical sciences 36%

Clinical medicine 34%

Health sciences 28%

Mathematics 27%

Source: EC Open Science Monitor , forthcoming

Page 5: Open Data in Life Sciences: Why and Ho › 2018-gtipa-summit-david-osimo.pdfLife science pioneering open science Field of Science % OA Multidisciplinary 66% Agriculture, forestry,

How?

Page 6: Open Data in Life Sciences: Why and Ho › 2018-gtipa-summit-david-osimo.pdfLife science pioneering open science Field of Science % OA Multidisciplinary 66% Agriculture, forestry,

Tensions, not barriers

Open science

Scientists’ career

Marketappropriation

Page 7: Open Data in Life Sciences: Why and Ho › 2018-gtipa-summit-david-osimo.pdfLife science pioneering open science Field of Science % OA Multidisciplinary 66% Agriculture, forestry,

Carrots, not sticks

• Recognition• Embargo periods• Discriminatory access)• Reporting• Labels & badges• Reputation, citability• Funding for data

sharing

• Funders’ mandates have limited impactand are seldomenforced

• Relations, nottransactions: Data markets per se doesnot work

Digital Science, & Figshare. (2017). The State of Open Data 2017.

Page 8: Open Data in Life Sciences: Why and Ho › 2018-gtipa-summit-david-osimo.pdfLife science pioneering open science Field of Science % OA Multidisciplinary 66% Agriculture, forestry,

A continuum, not a binary choice

Source: OECD (2015), Data-Driven Innovation: Big Data for Growth and Well-Being,

OECD Publishing, Paris. http://dx.doi.org/10.1787/9789264229358-en

Page 9: Open Data in Life Sciences: Why and Ho › 2018-gtipa-summit-david-osimo.pdfLife science pioneering open science Field of Science % OA Multidisciplinary 66% Agriculture, forestry,

Thanks

[email protected]

Page 10: Open Data in Life Sciences: Why and Ho › 2018-gtipa-summit-david-osimo.pdfLife science pioneering open science Field of Science % OA Multidisciplinary 66% Agriculture, forestry,

Backup: GDPR

Open vs purpose-definedInnovation without permissionNeed for data hygiene