OntoMaton: a BioPortal-powered ontology widget for Google Spreadsheets. Bioinformatics. 2013 Feb 15;29(4):525-7. doi: 10.1093/bioinformatics/bts718 ICBO 2013, Paper Highlight, Presented by Trish Whetzel Eamonn Maguire, Alejandra González-Beltrán, Patricia L. Whetzel, Susanna-Assunta Sansone and Philippe Rocca-Serra
Ontomaton: NCBO BioPortal Ontology lookups in Google Spreadsheets produced by ISATeam at University of Oxford e-Research Centre (Eamonn Maguire, Alejandra Gonzalez-Beltran, Philippe Rocca-Serra and Susanna Sansone) and NCBO (Trish Whetzel).
The work was presented during ICBO 2013 in Montreal by Trish Whetzel (Thanks Trish!)
This document is posted to help you gain knowledge. Please leave a comment to let me know what you think about it! Share it to your friends and learn new things together.
Transcript
OntoMaton: a BioPortal-powered ontology widget for Google Spreadsheets.
Bioinformatics. 2013 Feb 15;29(4):525-7. doi: 10.1093/bioinformatics/bts718
ICBO 2013, Paper Highlight, Presented by Trish Whetzel
Eamonn Maguire, Alejandra González-Beltrán, Patricia L. Whetzel,
Susanna-Assunta Sansone and Philippe Rocca-Serra
Motivations• Geographically distributed collaborators• Spreadsheets used to collect data• Potential for conflicting versions• Need to maintain provenance• Need to provide ontology look-ups• Need for collaborative editing
ISAcreator: Ontology Lookup and Term Selection
ISAcreator: Ontology markup via NCBO Annotator
Curation of datasets imported or converted from other formats
Motivations• Geographically distributed collaboratorsü Spreadsheets used to collect data• Potential for conflicting versions• Need to maintain provenanceü Need to provide ontology look-ups• Need for collaborative editing
a BioPortal-powered ontology widget for Google Spreadsheets
OntoMaton: Leverages Google Spreadsheets
Collaborative editingProvenance trackingVersion control