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Abstract Myeloperoxidase (MPO) belongs to a family ofrelated proteins which also includes eosinophil, thyroid,and lactoperoxidase. The MPO gene is a 14-kb gene locat-ed on the long arm of chromosome 17. Thus far four muta-tions (R569W, Y173C, M251T and a 14-base deletion inexon 9) have been identified in patients with MPO defi-ciency. As in other genetically determined diseases, manymore mutations will eventually be revealed that cause thisdisease. Present evidence shows that most patients arecompound heterozygotes, i.e., they have inherited differentmutations on their paternal and maternal MPO alleles. Un-derstanding why some patients with this genetic deficiencydevelop clinical symptoms while others do not requiresmutation analyses of a large number of patients. This in-cludes the analysis of genotype-phenotype relationships.
Genotyping has also been started in patients with EPO-de-ficiency.
Key words Peroxidase deficiency · Mutation analysis ·Genotype-phenotype relationship
Communicated by: William M. Nauseef and Petro E. Petrides
P.E. PetridesDivision of Oncology and Hematology, School of Medicine, Humboldt University, Charité Campus Mitte, Schumannstrasse 20/21, D-10117 Berlin, GermanyE-mail: petrides@charité.de
In humans there are several peroxidases that are importantfor cell physiology: myeloperoxidase (MPO) in neutro-phils, eosinophil peroxidase (EPO) in eosinophils, thyroidperoxidase (TPO) in thyroid cells, and lactoperoxidase(LPO) secreted in milk. These enzymes belong to a familyof structurally and functionally related proteins. Here, I re-view present knowledge of the structure, regulation, andmutations of the MPO and EPO genes.
Cloning and structure of the MPO gene
MPO enzyme synthesis is restricted to late myeloblasts andpromyelocytes in the bone marrow. MPO was first isolatedin 1941 [1] and its deficiency described in 1966 [2], but itwas only in the middle 1980s that the cDNA for this enzymewas cloned by several laboratories, when Chang et al. [3],Johnson et al. [4, 5], Weil et al. [6], Yamada et al. [7], andMorishita et al. [8] reported the characterization of humanMPO cDNA. Analysis of the genomic DNA by Morishita etal. [9] revealed a single gene of approximately 14 kb, com-posed of 11 introns and 12 exons (Fig. 1). Soon thereafterthe gene was localized to the long arm of chromosome 17 insegment q11–21 [6], q22–24 [10], or q21.3–23 [11, 12]. Thisis in close proximity to the breakpoint for the translocation
PETRO E. PETRIDES
received his M.D. from theUniversity of Munich in 1975.From 1978 until 1984 heworked at the Salk Institute inLa Jolla and at Stanford Uni-versity Medical School, PaloAlto, CA. From 1984 to 1998he was on the faculty of theGrosshadern Medical School ofthe University of Munich. He iscurrently Clinical Professor ofInternal Medicine in the Divi-sion of Oncology and Hematol-ogy at the Charité MedicalSchool at the Humboldt Uni-versity of Berlin. His major re-search interests are genotype-phenotype relationships invarious hematological disordersand the role of proteinases inmyeloid leukemias.
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Fig. 1 for Continuation and legend see page 690
of acute promyelocytic leukemia, which caused a specula-tion that this gene is involved in acute promyelocytic leuke-mia [13]. This, however, has not been confirmed.
Existence of a peroxidase multigene family
Protein and gene analytical investigations have led to theconclusion that MPO, EPO, TPO, and LPO belong to a su-perfamily of related proteins [14–16]. Homology at theamino acid level between MPO and EPO is 68%, between
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Fig. 1 a Chromosomal organization of the human MPO gene with12 exons and 11 introns. Top line, size scale (in kilobases) [9]. b,cNucleotide sequence of the human MPO gene. (Genbank entries arefor cDNA of MPO X04876 and for the gene X64647.) (From [5])
cContinuation of Fig. 1
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Fig. 2 Amino acid sequence comparison between the various peroxidase proteins (MPO, EPO, TPO, and LPO). (From [7])
EPO and TPO 44%, and between LPO vs. MPO/EPO 51%(Fig. 2).
Transcriptional regulation of the MPO gene
Transcription of the MPO gene is tightly regulated in a tis-sue- and differentiation-specific manner. Alternative splic-ing of hnRNA leads to various transcripts of different sizes(e.g., 3.6 and 2.9 kb) [17]. Progressive demethylation in the5’ flanking region of the MPO gene is a prerequisite fortranscription [18, 19]. Expression of the gene is regulatedby the cell-specific transcription factor AML-1; the integri-ty of the AML-1 binding site is essential for the activity ofthe MPO proximal enhancer [20, 21]. Austin et al. [22, 23]have identified the basic or minimal human MPO promotorin the proximal 5’ flanking DNA between bp –128 and +11and shown that adjacent DNA sequences enhance promotoractivity. Seven discrete nuclear binding sites (DP1–DP7)are present within the proximal 600-bp flanking region ofthe MPO gene (Table 1). Since experimental mutation ofsite DP7 stimulates and mutations of DP1–DP6 reduce pro-motor activity, it is likely that these cis elements contributein vivo to the activity of the MPO promotor [24, 25]. TheMPO promotor also contains an Alu element with bindingsites for retinoic acid and thyroid hormone receptors [26].There are two MPO alleles which differ at one known posi-tion (–463 G/A) in this region.
This single base substitution (G→A) can occur as a so-matic mutation in acute myelocytic leukemia cells [24, 25]and as an inherited polymorphism with functional signifi-cance in vitro [26]; the presence of an A rather than a Gdecreases expression by the abolition of a binding site forthe SP1 transcription factor. The wild type is thereforecalled SP, while the mutated allele has been termed N (for“no binding” of SP-1).
When HL60 cells (a leukemia cell line) are induced todifferentiate into phenotypically normal granulocytes ormonocytes by tetradecanoylphorbol acetate, dimethylsul-foxide, or retinoic acid [6, 27–30], they cease to transcribethe MPO gene. Similar results have been obtained by insitu hybridization [31]. Downregulation of the MPO genetranscription is associated with an alteration of specific nu-clease sensitive sites [32].
In normal human bone marrow cytokines such as tumornecrosis factor-α decrease MPO transcription [33]. Granu-locyte colony-stimulating factor induced differentiation ofmultipotential progenitor cells results in activation of pro-
teins of the Pu1 and C-EBP family and their recruitment tothe nucleus where they bind to a distal MPO upstream en-hancer [34]. In addition, the expression of the MPO geneis regulated via the above proximal enhancer by c-myb andAML-1 [35].
MPO gene expression in leukemias
MPO gene expression is found in acute myeloid leukemias[36–39]. Interestingly, in some patients with acute lym-phoblastic leukemia MPO expression has also been ob-served, but no MPO protein has been found either byWestern blotting or cytochemical methods [36, 40, 41].The reasons for this observation are still unclear. An asso-ciation between MPO deficiency and acute myeloid leuke-mia has been reported in one individual [42]. The SP/SPgenotype (see above) is correlated with increased MPOmRNA levels in primary myeloid leukemia cells and over-represented in AML-M3 and AML-M4 [43].
MPO genetic polymorphism and cancer risk
Since MPO activates carcinogens in tobacco smoke, in-cluding benzo[a]pyrene and aromatic amines, the hypothe-sis was tested that lower MPO transcription reduces therisk of lung cancer [44]. Restriction fragment length poly-morphism (RFLP)/polymerase chain reaction (PCR) anal-ysis of 1000 individuals revealed 8–9% persons to be ho-mozygous for the N-allele. These individuals may be at adecreased risk of lung cancer.
Genetics of peroxidase deficiency
Hereditary and acquired forms of MPO deficiency
MPO deficiency was first described in 1966 [2]. Severalinvestigators have discussed, for example, the allele fre-quency and mode of inheritance of this entity [45–48] (fordetails see the contributions by Nauseef and Kutter, thisvolume). Deficiency can be either acquired or hereditary,depending upon whether germline and/or somatic muta-tions are involved. If germline mutations are involved,both alleles must be mutated to yield the clinical pheno-type (Fig. 3).
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Site Sequence Location (bp)
DP1 CATAA –27 to –23DP2 CACCCCACCCCCAGC –49 to –35DP3 GTGGGGAGGAGA –100 to –89DP4 CCCTCCTTCCTGCCCCTTCCCCC –160 to –138DP5 GAGCAAGATAACCGTCT –219 to –203DP6 TCCCAGCTACTCGGGAGG –285 to –268DP7 GCAGTGGATCACTTGAGGTCAGGAGTTCAAGACCAGCCTGG –466 to –425
Table 1 Cis elements(DP1–DP7) in the 5’ flankingregion of the human MPO gene(from [24])
Since hematopoietic stem cells are involved, MPO defi-ciency can also be acquired. For instance, a mutation inone allele could be present in germline (without any clini-cal evidence) while a second hit in a hematopoietic stemcell causes MPO deficiency. This would be analogous tothat which is observed in paroxysmal nocturnal hemoglo-binuria [49]. This leads to the presence of two coexistinggranulocyte populations. Their quantitative ratio dependsupon the growth tendencies of both clones (Fig. 4). Thismodel would explain the observation by Kutter et al. [50]of two granulocyte populations in one individual.
Aberrant restriction endonuclease digests in MPOdeficiency
The first evidence of the nature of the genetic defect wasthe identification of aberrant restriction endonuclease di-gests of DNA in MPO deficiency patients compared tonormal individuals [51, 52]. In the RT family from Mu-nich, Germany (and also four families from the UnitedStates), a 2.6- vs. 2.1-kb fragment was found when theirDNA was digested with BglII and subjected to Southernanalysis (Fig. 5). RT (from the Bavarian family) had osteo-myelitis of her right tibia diagnosed in 1979. Despite sur-gical intervention she had a relapse in the same site 2years later. In 1988 she had partial resection of the rightfourth rib because of osteomyelitis. Since that time she hasbeen clinically stable, requiring episodic courses of antibi-otic treatment because of recurrent pain at the site of herprevious infections.
Identification of the first mutation in MPO deficiency
This led to further investigations [53, 54], which showedthat this RFLP was created by the production of a cleavagesite for BglII (AGATCT) not present in exon 10 of normalindividuals (AGATCC) (Fig. 6, Fig. 1C). By a C→T transition(8089C→T; for nomenclature see Beutler et al. [55]) thiscauses an arginine to tryptophan change in codon 569
(R569W; Fig. 7). This residue is conserved in all peroxi-dases (see Fig. 2) which suggests an important function.The mutation results in a maturational arrest at the stage ofapoapoMPO (see the contribution by Nauseef) [56]. Thusthe gene product is enzymatically inactive and is not pro-
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Fig. 5a,b RFLP analysis of individuals with MPO deficiency. a Ge-nomic DNA from leukocytes from RT (lane 1), RT’s father (lane 2)and RT’s mother (lane 3) was digested with BglII and separated onan agarose gel prior to Southern blotting. The nylon filter wasprobed with a 32P-radiolabeled probe for MPO, washed, and visual-ized by autoradiography. The BglII digests from RT and her mothereach possess a 2.1-kb MPO-related fragment not present in DNAfrom RT’s father. b Exon 10 was amplified by PCR from genomicDNA isolated from the members of the RT family. The amplicon wasincubated with enzyme buffer alone (–) or BglII (+) and then sepa-rated by electrophoresis in an agarose gel stained with ethidium bro-mide. The amplicon of RT’s father is resistant to digestion withBglII, whereas the amplicons from RT and her mother are partiallydigested by BglII, indicating they are both heterozygous. (From [69])
Fig. 6 Sequence analysis of exon 10 from RT and her parents showsthat nucleotide 8089 is mutated from C to T in one of the allelesfrom RT and her mother, whereas 8089 is normal in both alleles ofher father. (From [69])
Fig. 4 Genetics of acquired MPO deficiency (left: 1. hit: germlinemutation; right: 2. hit: somatic mutation in hematopoietic stem cell)
cessed or targeted to the mature lysosomal form of MPO.Similar R→W mutations occur in phenylketonuria(R408W) and acute intermittent porphyria (R116W,R167W, R173W, or R201W). In the latter case the porpho-bilinogen deaminase protein is involved where the loss ofthe arginine side chain leads to the interruption of stabiliz-ing salt bridges within the protein or between the enzymeprotein and its substrate. C→T transitions are mutationalhotspots; methylated cytosine residues can be deaminated,which leads through a keto-enol tautomeric change tothymine. These residues pair with adenine residues duringDNA replication, which causes the C→T transition (Fig.8). Additional mutations have recently been identified thatcause a substitution of tyrosine in position 173 by cysteine(Y173C) (F.R. DeLeo, M. Goedken, S.J. McCormick,W.M. Nauseef, submitted), a substitution of methionine bythreonine in position 251 (M251T) or a 14-base deletion inexon 9 [57]. In addition to mutations which cause mis-sense mutations, structural alterations in the regulatoryparts of the MPO gene have been postulated which causepretranslational defects [58, 59].
Methods for screening for mutations in MPO deficiency
Since patients with the R569W mutation on one allelehave a complete deficiency, either an dominant effect ormore likely a second mutation on the other allele must bepostulated to explain this complete loss of enzymatic ac-
tivity. Mutation analysis in other genetic diseases has re-vealed that more than 400 different mutations can occur ina given gene (Table 2). Some of these mutations occur at arelatively high frequency while others are observed only incertain families and are therefore referred to as private mu-tations [65].
Since DNA sequencing is time consuming and expen-sive, effective and economical DNA-scanning methods are
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Disease Protein Gene size (kb) Number of mutations Reference
Fig. 7 The C to T transition incodon 569 (8089C→T) in exon10 of the MPO gene leads to asubstitution in the protein ofarginine by tryptophan, whichcannot form electrostatic bonds
Fig. 8 Deamination of cytosine or 5-methylcytosine to uracil orthymine, which leads during DNA replication to a C→T transition
necessary [66]. If the position of the mutation is alreadyknown, the exon (or intron) containing it can be amplifiedby PCR and the reaction product is then subjected toRFLP analysis if the mutation leads to an alteration of arestriction enzyme cleavage site (Fig. 5). Utilizing such anapproach, we have identified 70% of mutated alleles in 27patients with Gaucher disease when we assayed their DNAfor eight known mutations and the gene deletion [62, 67].
If there are no restriction enzyme cleavage sites in thearea of the mutation, or if the mutation is not yet known,physical methods such as denaturing gradient gel electro-phoresis (DGGE) and single-strand conformation poly-morphism (SSCP) are required. DGGE is based on theprinciple that DNA duplexes which differ by a basepairhave a different temperature or denaturant concentration atwhich they melt. When melted, they stop migration in agel. Thus duplexes differing by a basepair stop at differentpositions, which correspond to different concentrations ofdenaturant or temperature and therefore indicate the pres-ence of a mutation. The detection is more evident whenheteroduplexes are formed, and a nonmelting region or aregion difficult to melt (clamp technique) is added to oneof the amplification primers. An example of this techniqueis shown in Fig. 9.
SSCP analysis is based upon the observation that astrand of single-stranded DNA folds differently from an-other if it differs by a single base. This leads to different
mobilities for these two strands in nondenaturing gel elec-trophoresis. In addition to these techniques, mismatchcleavage methods are available.
The newly developed DNA chips [68] rely on hybrid-ization of labeled test single-strand DNA to an array ofknown oligonucleotides on a very small physical substrate.Different patterns of hybridization between wild-type andtest samples signal the presence of a mutation.
The ideal mutation scanning method, would detect100% of the mutations and would be able to screenkilobase lengths in a single step, economical, and easy tohandle; however, this has yet not been developed.
Compound heterozygosity in MPO deficiency
Analysis of various families with genetic MPO deficiencyfor peroxidase activity, immunoreactivity, and the presenceof the R569W mutation indicates that most patients arecompound heterozygotes, i.e., they have inherited differentalleles from their parents [69]. In the T family from Ger-many (Table 3) patient RT has a complete loss of MPOand immunoreactivity but is heterozygous for the R569Wmutation. She inherited this mutation from her motherRoT, who has 50% immunoreactivity and MPO activity.Since her father, GT, has approx. 75% MPO and immu-noreactivity, he must have another, still unknown, allelewhich he passed to his daughter. The combination ofR569W and this allele causes a complete loss of activity.
The presence of many mutations reported in various genet-ic disorders (see Table 1) has revealed that a large number ofdifferent allele combinations determine the genotype. Figure10 illustrates how the combination of different gene productswith differing residual enzymatic activity can yield a widespectrum of resulting total activities. This explains in part thewide clinical spectrum (phenotype) observed in various genet-ic disorders. In MPO deficiency the situation is further compli-
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Fig. 9 DGGE analysis in a fam-ily with the autosomal dominantacute intermittent porphyria forthe identification of gene carri-ers. PCR-amplified oligonucle-otides form one duplex type(wild-type/wild-type) in normalsand three duplex types in genecarriers (wild-type/wild-type,wild-type/mutated allele andmutated/mutated allele). Sevengene carriers were identified inthe family of the patient (no.12). (From [64])
Table 3 MPO activity, immunoreactivity, and presence of theR569W mutation in a German kindred with MPO deficiency [69]
cated since the enzyme is formed by proteolysis from a precur-sor and forms a tetramer which must be transported throughthe endoplasmic reticulum into the azurophilic granules.
Mutation analysis in patients with EPO deficiency
EPO is a highly basic protein present in the specific gran-ules of eosinophilic granulocytes. It is a 70-kDa dimercomposed of a 15-kDa light chain and a 55-kDa heavychain held together by a disulfide bridge. EPO deficiencywas first described by Presentey [71], and since then about100 individuals have been reported with this abnormality[72–76]. After the EPO gene had been cloned [15, 77], thefirst mutation analysis in an individual with hereditaryEPO deficiency was described. The patient was compoundheterozygous, i.e., a G→A transition caused a replacementof an arginine with a histidine (R286H) on one allele andan insertion in exon 10 caused a out of frame reading withthe production of a premature stop on the other allele.
Future directions
The cloning of MPO and EPO genes began the analysis ofthe molecular defect in individuals with MPO and EPOdeficiency. Systematic screening for mutations in a largenumber of patients will enable us to understand the molec-ular nature of these common defects and to explain theirclinical consequences. Moreover, a more detailed knowl-edge of the molecular basis of MPO gene expression andthe importance of the N/N genotype should lead to an un-derstanding of the relevance of this system to cancer de-velopment.
Acknowledgements The author’s own research reported here wassupported in part by DFG grant Pe 258/20-1 and 2.
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