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Michigan Team February, 2005
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Michigan Team February, 2005. Amy Wagaman Bibhas Chakraborty Herle McGowan Susan Murphy Lacey Gunter Danny Almirall Anne Buu.

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Page 1: Michigan Team February, 2005. Amy Wagaman Bibhas Chakraborty Herle McGowan Susan Murphy Lacey Gunter Danny Almirall Anne Buu.

Michigan Team

February, 2005

Page 2: Michigan Team February, 2005. Amy Wagaman Bibhas Chakraborty Herle McGowan Susan Murphy Lacey Gunter Danny Almirall Anne Buu.

Amy Wagaman

Bibhas Chakraborty

Herle McGowan

Susan Murphy

Lacey Gunter

Danny Almirall

Anne Buu

Page 3: Michigan Team February, 2005. Amy Wagaman Bibhas Chakraborty Herle McGowan Susan Murphy Lacey Gunter Danny Almirall Anne Buu.

Outline

• Overview• Danny Almirall• Anne Buu• Bibhas Chakraborty• Lacey Gunter• Herle McGowan• Susan Murphy• Amy Wagaman• New Additions!

Page 4: Michigan Team February, 2005. Amy Wagaman Bibhas Chakraborty Herle McGowan Susan Murphy Lacey Gunter Danny Almirall Anne Buu.

Primary Focus

• Drug Dependence Prevention and Treatment• Time-varying Treatments• Development of Designs and Methodology that

informs the construction of adaptive treatment strategies.– Chronic, relapsing disorder requires sequencing and

timing decisions– High dimensional problems– Treatments are multi-component

Page 5: Michigan Team February, 2005. Amy Wagaman Bibhas Chakraborty Herle McGowan Susan Murphy Lacey Gunter Danny Almirall Anne Buu.

Danny Almirall

Structural Nested Mean Models for Assessing Time-Varying Effect Moderation

Danny’s research is funded by a Rackham Fellowship;

collaborates with Tom Ten Have and Susan.

Page 6: Michigan Team February, 2005. Amy Wagaman Bibhas Chakraborty Herle McGowan Susan Murphy Lacey Gunter Danny Almirall Anne Buu.

Effect Moderation

• Two time points: S1, a1, S2(a1), a2, Y(a1, a2). • a’s are time-varying treatments; S’s are time-

varying observations; Y is response. 2(a2,s2)=effect of treatment a2 on response Y(a1,.)

given S1=s1, S2(a1)=s2. 1(a1,s1)=effect of treatment a1 on response, Y(.,0),

given S1=s1.

1 and 2 describe the intermediate effects of a1 and a2, respectively, given the past. They describe time-varying effect moderation. No effect moderation ’s are constant in S’s.

Page 7: Michigan Team February, 2005. Amy Wagaman Bibhas Chakraborty Herle McGowan Susan Murphy Lacey Gunter Danny Almirall Anne Buu.

The Structural Nested Mean Model

• The SNMM provides a way to combine 1 and 2 in a model for the conditional mean of Y(a1,a2) given S1 and S2(a1).

• One can then pose parametric models for 1 and 2.

• The challenge is that the SNMM depends, additionally, on non-causal nuisance functions related to the “main effects” of the S’s.

Page 8: Michigan Team February, 2005. Amy Wagaman Bibhas Chakraborty Herle McGowan Susan Murphy Lacey Gunter Danny Almirall Anne Buu.

Estimating the SNMM

• Semi-parametric estimators exist that do not require positing models for the nuisance functions, but are they too variable?

• Estimators that include models for the nuisance functions may be less variable.

• But positing mis-specified models for the nuisance function may induce bias in the estimates of the treatment effects.

• We wish to study the bias-variance tradeoff.

Page 9: Michigan Team February, 2005. Amy Wagaman Bibhas Chakraborty Herle McGowan Susan Murphy Lacey Gunter Danny Almirall Anne Buu.

Anne Buu

Beginning work on a K01 application to NIDA

Anne’s research is funded by Bob Zucker in the PsychiatryDepartment

Page 10: Michigan Team February, 2005. Amy Wagaman Bibhas Chakraborty Herle McGowan Susan Murphy Lacey Gunter Danny Almirall Anne Buu.

Ideas so far

• Use smoothing techniques to analyze data from the University of Michigan-Michigan State Longitudinal Family Study. (Use functional data analyses and also ideas by Rice in 2004.)

• Construct child development profiles by family types

• Model impact of family factors on child development profiles

Page 11: Michigan Team February, 2005. Amy Wagaman Bibhas Chakraborty Herle McGowan Susan Murphy Lacey Gunter Danny Almirall Anne Buu.

U of M-MSU Family Study

• An eighteen year prospective study• Each family was recruited as a triad: alcoholic

father, biological mother and 3-5 year old son.• Each member was assessed on psychological,

social, cognitive, and substance use every 3 years.

• During adolescence (ages 11-18), the target son was assessed annually.

• At later time points, siblings were also assessed.

Page 12: Michigan Team February, 2005. Amy Wagaman Bibhas Chakraborty Herle McGowan Susan Murphy Lacey Gunter Danny Almirall Anne Buu.

Bibhas Chakraborty

Design Strategies for Behavioral Intervention Research: A Simulation Study

Bibhas’ research is funded by Vic Strecher’s NCI P-50;Collaborates with Vijay Nair, Vic Strecher, Linda Collinsand Susan.

Page 13: Michigan Team February, 2005. Amy Wagaman Bibhas Chakraborty Herle McGowan Susan Murphy Lacey Gunter Danny Almirall Anne Buu.

The Goal

• Evaluate Designs for optimizing a multi-component behavioral treatment.

• In the present study, we are comparing the classical randomized trial approach vs. multistage experimental approach (MOST using balanced fractional factorials).

• We want to identify situations where one approach is distinctly better than the other.

Page 14: Michigan Team February, 2005. Amy Wagaman Bibhas Chakraborty Herle McGowan Susan Murphy Lacey Gunter Danny Almirall Anne Buu.

The Set-up / Simulation Design

• The true data-generating model is a complete mediation model, with 6 factors, 6 adherence variables, 6 mediators and the response.

• Unknown component: Type (binary).

• All but one factors are binary.

• Use of scientist’s prior knowledge in both classical and experimental approach.

Page 15: Michigan Team February, 2005. Amy Wagaman Bibhas Chakraborty Herle McGowan Susan Murphy Lacey Gunter Danny Almirall Anne Buu.

The Classical Approach

• Two-group comparison of treatment vs. control (Kitchen-sink approach) on the entire set of subjects.

• Post hoc analysis to:

- investigate the reason of insignificance.

- refine the significant treatment combination.• Post hoc analysis is either dose-response

analysis or regression with mediators as intermediate outcome.

Page 16: Michigan Team February, 2005. Amy Wagaman Bibhas Chakraborty Herle McGowan Susan Murphy Lacey Gunter Danny Almirall Anne Buu.

The Experimental Approach

• Divide available subjects into two groups and conduct two experimental stages: Screening and Refining.

• Screening Stage: Use Fractional Factorial Design to estimate

main effects and interactions.• Refining Stage: - Finding best level of a non-binary factor. - Settling confusion about significant (aliased) interactions, if necessary. • Thus optimizing treatment proactively

Page 17: Michigan Team February, 2005. Amy Wagaman Bibhas Chakraborty Herle McGowan Susan Murphy Lacey Gunter Danny Almirall Anne Buu.

Lacey Gunter

Comparing Reinforcement Learning Algorithms

Lacey’s research is funded by this center; she works with

Susan.

Page 18: Michigan Team February, 2005. Amy Wagaman Bibhas Chakraborty Herle McGowan Susan Murphy Lacey Gunter Danny Almirall Anne Buu.

Reinforcement Learning

• What is it? Learning through interaction with your environment

• The general idea: Based on present information and past experience, our goal is to choose actions which achieve the best long term results

• Example: Based on past adherence and responses to treatment and the current health status of a patient, what actions should we take to minimize a patient’s long term drug dependence.

Page 19: Michigan Team February, 2005. Amy Wagaman Bibhas Chakraborty Herle McGowan Susan Murphy Lacey Gunter Danny Almirall Anne Buu.

Reinforcement Learning Algorithms

• Several algorithms exist for choosing the best set of actions, we are studying two such algorithms

• Q-learning: model outcome based on past experience, current action and the interaction between past experience and current action

• A-learning: model outcome only based on current action and the interaction between past experience and current action

Page 20: Michigan Team February, 2005. Amy Wagaman Bibhas Chakraborty Herle McGowan Susan Murphy Lacey Gunter Danny Almirall Anne Buu.

We conjecture:

• Q-learning tends to be more biased but less variable

• A-learning tends to be less biased but more variable

• We are studying which algorithm performs better in terms of bias-variance trade off in different settings

• These tradeoffs are altered when we use bagging.

Page 21: Michigan Team February, 2005. Amy Wagaman Bibhas Chakraborty Herle McGowan Susan Murphy Lacey Gunter Danny Almirall Anne Buu.

Herle McGowan

Causal Inference & Data Collection

Herle’s research is funded by this center; she collaborates

with Rob Nix, Karen Bierman and Susan.

Page 22: Michigan Team February, 2005. Amy Wagaman Bibhas Chakraborty Herle McGowan Susan Murphy Lacey Gunter Danny Almirall Anne Buu.

Data Collection

• Data collection methods involving clinical judgment that can result in confounding

• Data collection using a regression discontinuity design combined with clinical judgment

Page 23: Michigan Team February, 2005. Amy Wagaman Bibhas Chakraborty Herle McGowan Susan Murphy Lacey Gunter Danny Almirall Anne Buu.

Using clinical judgment to readjust dose throughout trial

• Causes confounding when we want to run a dose response.

• Currently Herle is writing a paper discussing this issue and illustrating the kinds of biases that can occur.

Page 24: Michigan Team February, 2005. Amy Wagaman Bibhas Chakraborty Herle McGowan Susan Murphy Lacey Gunter Danny Almirall Anne Buu.

Regression Discontinuity

Regression discontinuity (RD) design.– All subjects scoring above a cutoff value are assigned

to one treatment condition while all subjects scoring below are assigned to a second treatment condition.

Page 25: Michigan Team February, 2005. Amy Wagaman Bibhas Chakraborty Herle McGowan Susan Murphy Lacey Gunter Danny Almirall Anne Buu.

Regression Discontinuity Designs & Clinical Judgment

• Herle’s thesis will be on this topic; she has already completed much of the literature review and background work.

Page 26: Michigan Team February, 2005. Amy Wagaman Bibhas Chakraborty Herle McGowan Susan Murphy Lacey Gunter Danny Almirall Anne Buu.

Susan Murphy

Experimental Design and Analysis Methods for Developing Adaptive Treatment

Strategies

Susan’s research is funded by this center, a K02, an R21 & Vic Strecher’s P-50.

Page 27: Michigan Team February, 2005. Amy Wagaman Bibhas Chakraborty Herle McGowan Susan Murphy Lacey Gunter Danny Almirall Anne Buu.

Projects

• Experimental designs for developing treatment strategies with Derek Bingham and Linda Collins

• Formulating less biased methods for constructing treatment strategies.

• Using system dynamics models to inform the construction of treatment strategies with Joelle Pineau, John Rush and Satinder Baveja.

Page 28: Michigan Team February, 2005. Amy Wagaman Bibhas Chakraborty Herle McGowan Susan Murphy Lacey Gunter Danny Almirall Anne Buu.

Projects

• Working on a white paper concerning the methodological challenges in developing treatment strategies with Dave Oslin, John Rush and Satinder Baveja.

• Writing a grant (right now) with Vic Strecher, Caroline Richardson and Satinder Baveja to develop a prevention program designed to increase and maintain activity.

Page 29: Michigan Team February, 2005. Amy Wagaman Bibhas Chakraborty Herle McGowan Susan Murphy Lacey Gunter Danny Almirall Anne Buu.

Amy Wagaman

Constructing Tailoring Variables for Decision Making

Amy’s research is funded by this center; she collaborates with Jim McKay, Ji Zhu and Susan.

Page 30: Michigan Team February, 2005. Amy Wagaman Bibhas Chakraborty Herle McGowan Susan Murphy Lacey Gunter Danny Almirall Anne Buu.

Developing a Tailoring Variable

• The primary objective is to develop a summary variable that can discriminate between patients in terms of assigning a treatment.

• This summary variable is constructed from individual characteristics and behavior on past treatment.

• Tools are PLS and combining this with binary responses.

Page 31: Michigan Team February, 2005. Amy Wagaman Bibhas Chakraborty Herle McGowan Susan Murphy Lacey Gunter Danny Almirall Anne Buu.

Motivation• Consider a substance abuse aftercare

program, where the goal is to prevent patient relapse. Assume that there is a treatment effect, and a treatment interaction with a variable that measures counseling attendance during prior acute treatment.

• Perhaps highly motivated patients would benefit more from one treatment on average, while patients with low motivation would benefit more from another.

Page 32: Michigan Team February, 2005. Amy Wagaman Bibhas Chakraborty Herle McGowan Susan Murphy Lacey Gunter Danny Almirall Anne Buu.

Challenges

• The summary variable must be constructed from data that lives in a high dimensional space, i.e. dimension reduction methods need to be used.

• Subject-based knowledge about what variables might be more useful should be taken into account.

• There is a danger that detected interactions may be spurious.

Page 33: Michigan Team February, 2005. Amy Wagaman Bibhas Chakraborty Herle McGowan Susan Murphy Lacey Gunter Danny Almirall Anne Buu.

Additions!

• Pawel Mierzejewski (beginning work with Satinder Baveja, John Rush and Susan on feature construction)